View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21198_high_2 (Length: 544)
Name: NF21198_high_2
Description: NF21198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21198_high_2 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 495; Significance: 0; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 15 - 525
Target Start/End: Original strand, 3569566 - 3570076
Alignment:
| Q |
15 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtcgatgggctatgttgggtgccttaggatgtgtcttccctgagctcttatctcgcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3569566 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtagatgggctatgttgggtgccttgggatgtgtcttccctgagctcttatctcgcaa |
3569665 |
T |
 |
| Q |
115 |
tggtgtcaaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgca |
214 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3569666 |
tggtgtacaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgca |
3569765 |
T |
 |
| Q |
215 |
caaagcatccttgctatatgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccac |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3569766 |
caaagcatccttgctatatgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccac |
3569865 |
T |
 |
| Q |
315 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3569866 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
3569965 |
T |
 |
| Q |
415 |
gttctctatgtttggattcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgct |
514 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3569966 |
gttctctatgtttggattcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgct |
3570065 |
T |
 |
| Q |
515 |
tgggcctatgc |
525 |
Q |
| |
|
||||||||||| |
|
|
| T |
3570066 |
tgggcctatgc |
3570076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 15 - 522
Target Start/End: Original strand, 3563918 - 3564425
Alignment:
| Q |
15 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtcgatgggctatgttgggtgccttaggatgtgtcttccctgagctcttatctcgcaa |
114 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3563918 |
cagagacatttgccaaaaaccgtgaactcgaggtcatccacagtagatgggctatgttgggtgccttgggatgtgtcttccctgagctcttatctcgcaa |
3564017 |
T |
 |
| Q |
115 |
tggtgtcaaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgca |
214 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3564018 |
tggtgtcaaattcggcgaggctgtatggttcaaggcaggatcccaaatttttagtgagggtgggcttgactacttgggtaacccaagtctagtccatgca |
3564117 |
T |
 |
| Q |
215 |
caaagcatccttgctatatgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccac |
314 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||||||||||||||||| || ||||| || || |||| |
|
|
| T |
3564118 |
caaagcatccttgctatatgggctgtccaagttatcttaatgggtgctgttgagggttaccgtattgctggtggacctctcggtgaggtggttgacccac |
3564217 |
T |
 |
| Q |
315 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3564218 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
3564317 |
T |
 |
| Q |
415 |
gttctctatgtttggattcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgct |
514 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| || |||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
3564318 |
gttctctatgtttggatttttcgttcaagccattgtgactggaaagggacctatcgagaacctcgccgaccaccttgctgacccggttaacaacaatgct |
3564417 |
T |
 |
| Q |
515 |
tgggccta |
522 |
Q |
| |
|
|||||||| |
|
|
| T |
3564418 |
tgggccta |
3564425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 15 - 521
Target Start/End: Original strand, 3575897 - 3576403
Alignment:
| Q |
15 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtcgatgggctatgttgggtgccttaggatgtgtcttccctgagctcttatctcgcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || || |||||||||||||| |||||||| |||||||| |
|
|
| T |
3575897 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtagatgggctatgttaggagctttgggatgtgtcttccccgagctcttgtctcgcaa |
3575996 |
T |
 |
| Q |
115 |
tggtgtcaaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgca |
214 |
Q |
| |
|
|||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
3575997 |
tggtgtgaaattcggcgaggctgtgtggttcaaggcaggatctcaaatctttagtgagggaggacttgactacttgggtaacccaagcctagtccacgca |
3576096 |
T |
 |
| Q |
215 |
caaagcatccttgctatatgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccac |
314 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||||| ||||||||||| || ||||||||||| |||| |
|
|
| T |
3576097 |
caaagtatccttgctatatgggctgtccaagttatcttaatgggagctgttgagggttaccgtattgccggtggacctcttggtgaggtagtcgacccac |
3576196 |
T |
 |
| Q |
315 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
414 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||| || || || || ||||||||||||||||| |||||||||||||| || ||||||||| ||||||| |
|
|
| T |
3576197 |
tctacccaggtggaagctttgacccattgggcctcgctgacgacccagaggcttttgcagagttaaaggtgaaagaacttaagaatggtaggctagctat |
3576296 |
T |
 |
| Q |
415 |
gttctctatgtttggattcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgct |
514 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| || ||||| | |||| || || |||||||| ||| |
|
|
| T |
3576297 |
gttctctatgtttggattcttcgttcaggccattgtaaccggaaagggacctctagagaaccttgccgaccatatcactgaccccgtcaacaacaacgct |
3576396 |
T |
 |
| Q |
515 |
tgggcct |
521 |
Q |
| |
|
||||||| |
|
|
| T |
3576397 |
tgggcct |
3576403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 15 - 521
Target Start/End: Complemental strand, 3585321 - 3584815
Alignment:
| Q |
15 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtcgatgggctatgttgggtgccttaggatgtgtcttccctgagctcttatctcgcaa |
114 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
3585321 |
cagagacatttgccaaaaaccgtgaactcgaggtcattcatagtagatgggctatgttgggtgccttaggatgtgtcttcccagaactcttggctcgcaa |
3585222 |
T |
 |
| Q |
115 |
tggtgtcaaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgca |
214 |
Q |
| |
|
|||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3585221 |
tggtgtgaaattcggtgaggctgtgtggtttaaggcaggatctcaaatctttagtgagggtggacttgactacttgggtaacccaagcctagtccatgca |
3585122 |
T |
 |
| Q |
215 |
caaagcatccttgctatatgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccac |
314 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| ||||||||||| || ||||||||||| |||| |
|
|
| T |
3585121 |
caaagcatccttgctatttgggctgtccaagttatcttaatgggagctgttgaaggttaccgtattgccggtggacctcttggtgaggtagtcgacccac |
3585022 |
T |
 |
| Q |
315 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
414 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||||||| || || |||||||||||||||||||| ||||| |||||||| || |||||||||||||| || |
|
|
| T |
3585021 |
tctatccaggtggaagctttgacccattgggccttgctgaggaccccgaggcttttgcagagttaaaggttaaagaactcaagaatggtaggttagcgat |
3584922 |
T |
 |
| Q |
415 |
gttctctatgtttggattcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgct |
514 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| || ||||||||||||||| | | ||||| ||||||||| | ||||| |||||||||||||| ||| |
|
|
| T |
3584921 |
gttctctatgtttggattctttgttcaagccatcgtgaccggaaagggacctttaaaaaaccttgctgaccacatcgctgacccagttaacaacaacgct |
3584822 |
T |
 |
| Q |
515 |
tgggcct |
521 |
Q |
| |
|
||||||| |
|
|
| T |
3584821 |
tgggcct |
3584815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 32 - 525
Target Start/End: Original strand, 3572630 - 3573123
Alignment:
| Q |
32 |
aaccgtgaactcgaggtcatccacagtcgatgggctatgttgggtgccttaggatgtgtcttccctgagctcttatctcgcaatggtgtcaaattcggtg |
131 |
Q |
| |
|
||||||||||| |||||||| |||||| | |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
3572630 |
aaccgtgaactagaggtcattcacagtaggtgggctatgttgggagccttgggatgtgtcttccctgagctcttggctcgcaatggtgttaaattcggtg |
3572729 |
T |
 |
| Q |
132 |
aggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgcacaaagcatccttgctat |
231 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
3572730 |
aggccgtgtggttcaaggcaggatctcaaatctttagtgagggtggacttgactacttgggaaatccaagtctagtccatgcacaaagcatccttgctat |
3572829 |
T |
 |
| Q |
232 |
atgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccactctacccaggtggcagc |
331 |
Q |
| |
|
|||||| |||||||||||||||||||| || || |||||||| |||||||| ||||||||||| || ||||| ||||| ||||||||||||||||| || |
|
|
| T |
3572830 |
atgggctgtccaagttatcttaatgggtgctgttgagggttatcgtattgcaggtggacctctcggtgaggttgtcgacccactctacccaggtggtagt |
3572929 |
T |
 |
| Q |
332 |
tttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctatgttctctatgtttggat |
431 |
Q |
| |
|
|||||||| || ||||| || || || || ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| || |||||||||| |
|
|
| T |
3572930 |
tttgacccattaggcctagctgatgacccagaggcttttgcagagttaaaggtgaaagaactcaaaaatggaaggttagctatgttttccatgtttggat |
3573029 |
T |
 |
| Q |
432 |
tcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgcttgggcctatgc |
525 |
Q |
| |
|
|||| ||||| || ||||| |||||||| |||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
3573030 |
tctttgttcaagctattgtaaccggaaaaggacctatagagaatcttgctgaccaccttgctgacccagttaacaacaatgcatgggcctatgc |
3573123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 158 - 521
Target Start/End: Original strand, 3577896 - 3578259
Alignment:
| Q |
158 |
caaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgcacaaagcatccttgctatatgggcagtccaagttatcttaatgg |
257 |
Q |
| |
|
|||||||||||||| || || ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||| || ||||||||||| |
|
|
| T |
3577896 |
caaatctttagtgatggagggcttgactacttgggtaacccaagcctagtccacgcacaaagcatccttgctatttgggttgtcctagctatcttaatgg |
3577995 |
T |
 |
| Q |
258 |
gcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccactctacccaggtggcagctttgaccccttgggccttgccgaaga |
357 |
Q |
| |
|
| || || ||||||||||||||||| | ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||| || || || |
|
|
| T |
3577996 |
gagctgttgagggttaccgtattgccgatggacctcttggtgaggtagtcgatccactctaccccggtggaagctttgacccattgggcctcgcagacga |
3578095 |
T |
 |
| Q |
358 |
tcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctatgttctctatgtttggattcttcgttcaggccattgtcaccgga |
457 |
Q |
| |
|
|| ||||||||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| | |
|
|
| T |
3578096 |
cccagaggcttttgcagagttaaaggttaaagaactcaagaatggcaggttagctatgttctcgatgtttggatttttcgttcaggccattgtaaccgaa |
3578195 |
T |
 |
| Q |
458 |
aagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgcttgggcct |
521 |
Q |
| |
|
|||||||| | |||||||| ||||||||| | ||||||||||| |||| ||| |||||||||| |
|
|
| T |
3578196 |
aagggaccactagagaaccttgctgaccacatcgctgatccagtcaacagcaacgcttgggcct |
3578259 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 15 - 526
Target Start/End: Original strand, 13275846 - 13276355
Alignment:
| Q |
15 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtcgatgggctatgttgggtgccttaggatgtgtcttccctgagctcttatctcgcaa |
114 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||| |||||| | ||||||| ||||| | ||| |||| ||||| |||||| || | || | || || |
|
|
| T |
13275846 |
cagagacatttgcaaaaaaccgtgaacttgaggttatccactctagatgggccatgttcga-gccctaggttgtgtgttcccttagttgttggcgcgtaa |
13275944 |
T |
 |
| Q |
115 |
tggtgtcaaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgca |
214 |
Q |
| |
|
||| |||| ||| || || | || |||||||||||| | ||||||||||||||||||||||| || ||||| ||||| ||||||||||| || |||||| |
|
|
| T |
13275945 |
tggcgtcacatttggcgaagtcg-gtggttcaaggccaggtcccaaatctttagtgagggtgggctagactatttgggcaacccaagtcttgtacatgca |
13276043 |
T |
 |
| Q |
215 |
caaagcatccttgctatatgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccac |
314 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||| ||||| || || ||||||||||||||||||||||||||||| || ||||| | || |||| |
|
|
| T |
13276044 |
caaagcatccttgccatatgggcctgccaagttatcttgatgggtgctgttgagggttaccgtattgctggtggacctcttggtgaggtgattgacccac |
13276143 |
T |
 |
| Q |
315 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
414 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| || ||||| || || || ||||||| ||||||||| |||||||| | || |||||||||||||| || |
|
|
| T |
13276144 |
tctacccaggtggtagcttcgacccattgggtctcgccgatgacccagaagcttttgtagagttgaaagtgaaagagattaagaatggtaggttagccat |
13276243 |
T |
 |
| Q |
415 |
gttctctatgtttggattcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgct |
514 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||| ||||||||||||||| | || ||||| ||||||||||| || || || || |||||||| ||| |
|
|
| T |
13276244 |
gttttctatgtttggattcttcgttcaagccattgtgaccggaaagggacctttggaaaaccttgctgaccacctcgcagacccggtcaacaacaacgct |
13276343 |
T |
 |
| Q |
515 |
tgggcctatgct |
526 |
Q |
| |
|
||||||| |||| |
|
|
| T |
13276344 |
tgggcctttgct |
13276355 |
T |
 |
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Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 15 - 525
Target Start/End: Original strand, 38356933 - 38357443
Alignment:
| Q |
15 |
cagagacatttgccaagaaccgtgaactcgaggtcatccacagtcgatgggctatgttgggtgccttaggatgtgtcttccctgagctcttatctcgcaa |
114 |
Q |
| |
|
|||||||||| ||||||||||||||||| || |||||||| ||| | |||||||||||||| ||||| |||||||| ||||| ||||| || |||||||| |
|
|
| T |
38356933 |
cagagacattcgccaagaaccgtgaacttgaagtcatccatagtaggtgggctatgttgggagccttgggatgtgttttcccagagcttttgtctcgcaa |
38357032 |
T |
 |
| Q |
115 |
tggtgtcaaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgca |
214 |
Q |
| |
|
|||||| |||||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
38357033 |
tggtgttaaattcggtgaggctgtatggttcaaggccggatcccagatctttagcgagggtggacttgactacttgggtaacccaagtttggtccatgct |
38357132 |
T |
 |
| Q |
215 |
caaagcatccttgctatatgggcagtccaagttatcttaatgggcgccgtggagggttaccgtattgctggtggacctctaggcgaggtagtcgatccac |
314 |
Q |
| |
|
|| ||||| ||||| || ||||| |||||||||||| |||||||| || || |||||||||||||||||||| ||||| || ||||| || || |||| |
|
|
| T |
38357133 |
cagagcattcttgccatctgggctacccaagttatcttgatgggcgctgttgaaggttaccgtattgctggtggtcctcttggtgaggttgttgacccac |
38357232 |
T |
 |
| Q |
315 |
tctacccaggtggcagctttgaccccttgggccttgccgaagatcccgaggcttttgcagagttgaaggtgaaagaactaaaaaatggtaggttagctat |
414 |
Q |
| |
|
| |||||||| |||||||||||||| |||||||| || || || || |||||||| |||||||||||||| || ||||| || || ||||| ||||| || |
|
|
| T |
38357233 |
tatacccaggaggcagctttgacccattgggcctagctgacgacccagaggctttcgcagagttgaaggttaaggaactcaagaacggtagattagccat |
38357332 |
T |
 |
| Q |
415 |
gttctctatgtttggattcttcgttcaggccattgtcaccggaaagggacctattgagaacctcgctgaccaccttgctgatccagttaacaacaatgct |
514 |
Q |
| |
|
|||||||||||| |||||||| |||||||| ||||| ||||||||||||||| | |||||||| || || || ||||| || ||||| |||||||| || |
|
|
| T |
38357333 |
gttctctatgttcggattctttgttcaggctattgtgaccggaaagggacctttggagaaccttgccgatcatcttgccgacccagtcaacaacaacgca |
38357432 |
T |
 |
| Q |
515 |
tgggcctatgc |
525 |
Q |
| |
|
||||||||||| |
|
|
| T |
38357433 |
tgggcctatgc |
38357443 |
T |
 |
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Target: chr5 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 42602831 - 42602952
Alignment:
| Q |
116 |
ggtgtcaaattcggtgaggccgtgtggttcaaggcaggatcccaaatctttagtgagggtggacttgactacttgggtaacccaagtctagtccatgcac |
215 |
Q |
| |
|
||||| |||||||||||||| |||||||| ||||| || |||| ||||| ||||||||| |||||||| ||||| ||||||| || ||||||| | |
|
|
| T |
42602831 |
ggtgttaaattcggtgaggctgtgtggtttaaggctggtgcccagatcttctctgagggtggccttgactatttgggcaacccaaacctgatccatgctc |
42602930 |
T |
 |
| Q |
216 |
aaagcatccttgctatatgggc |
237 |
Q |
| |
|
| ||||| ||||| || ||||| |
|
|
| T |
42602931 |
agagcattcttgcaatctgggc |
42602952 |
T |
 |
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