View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2119_high_5 (Length: 345)

Name: NF2119_high_5
Description: NF2119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2119_high_5
NF2119_high_5
[»] chr1 (25 HSPs)
chr1 (248-334)||(11546024-11546111)
chr1 (10-81)||(11545301-11545373)
chr1 (172-218)||(51004796-51004842)
chr1 (172-221)||(40054942-40054991)
chr1 (172-220)||(43146777-43146823)
chr1 (172-221)||(43916349-43916398)
chr1 (173-220)||(44979229-44979276)
chr1 (172-221)||(1845076-1845125)
chr1 (172-221)||(7435868-7435917)
chr1 (253-310)||(26542769-26542826)
chr1 (172-220)||(26423845-26423893)
chr1 (258-305)||(9047216-9047263)
chr1 (179-221)||(23539945-23539987)
chr1 (178-228)||(45650368-45650418)
chr1 (172-221)||(31530310-31530358)
chr1 (251-292)||(39275719-39275760)
chr1 (251-292)||(41103584-41103625)
chr1 (172-221)||(44808759-44808808)
chr1 (177-221)||(4156140-4156184)
chr1 (256-292)||(21968018-21968054)
chr1 (187-219)||(23582133-23582165)
chr1 (179-227)||(32912208-32912256)
chr1 (181-221)||(46235196-46235235)
chr1 (187-219)||(47458897-47458929)
chr1 (177-221)||(49982459-49982503)
[»] chr7 (22 HSPs)
chr7 (172-225)||(38859589-38859642)
chr7 (250-310)||(45688116-45688176)
chr7 (172-221)||(21919691-21919740)
chr7 (172-221)||(23182393-23182442)
chr7 (177-227)||(5215384-5215434)
chr7 (172-222)||(41769288-41769338)
chr7 (172-221)||(29688927-29688976)
chr7 (172-221)||(31743656-31743705)
chr7 (172-228)||(48460247-48460303)
chr7 (251-310)||(38114762-38114820)
chr7 (251-285)||(27425550-27425584)
chr7 (261-310)||(31309865-31309915)
chr7 (179-221)||(38882821-38882863)
chr7 (262-310)||(7809993-7810042)
chr7 (172-221)||(15716261-15716309)
chr7 (172-221)||(32823461-32823510)
chr7 (172-221)||(42584116-42584165)
chr7 (187-219)||(2932581-2932613)
chr7 (251-310)||(10039859-10039919)
chr7 (187-219)||(22639372-22639404)
chr7 (173-221)||(27567163-27567211)
chr7 (179-219)||(27800033-27800073)
[»] chr4 (37 HSPs)
chr4 (172-221)||(19595286-19595335)
chr4 (172-219)||(49286693-49286740)
chr4 (172-218)||(595302-595348)
chr4 (172-221)||(19527078-19527127)
chr4 (172-221)||(32570722-32570771)
chr4 (172-221)||(39103540-39103589)
chr4 (172-220)||(9579668-9579716)
chr4 (172-220)||(9585363-9585411)
chr4 (179-221)||(27950261-27950303)
chr4 (172-221)||(12756357-12756406)
chr4 (179-220)||(25607694-25607735)
chr4 (249-310)||(50080830-50080891)
chr4 (177-221)||(4491215-4491259)
chr4 (177-221)||(6806989-6807033)
chr4 (177-221)||(22789585-22789629)
chr4 (172-216)||(53973464-53973508)
chr4 (181-220)||(18051778-18051817)
chr4 (178-221)||(34584185-34584228)
chr4 (179-221)||(24566370-24566412)
chr4 (261-310)||(26492483-26492533)
chr4 (177-223)||(30168099-30168145)
chr4 (251-289)||(47806411-47806449)
chr4 (172-226)||(56361313-56361366)
chr4 (188-221)||(3690883-3690916)
chr4 (262-310)||(9625509-9625558)
chr4 (188-221)||(34927105-34927138)
chr4 (249-305)||(7456541-7456597)
chr4 (251-279)||(13273226-13273254)
chr4 (187-219)||(17281779-17281811)
chr4 (187-219)||(17370281-17370313)
chr4 (177-221)||(21722552-21722596)
chr4 (262-309)||(33997631-33997679)
chr4 (256-292)||(36196596-36196632)
chr4 (190-226)||(43349050-43349086)
chr4 (187-219)||(48207447-48207479)
chr4 (177-221)||(52323969-52324013)
chr4 (187-219)||(54178789-54178821)
[»] chr2 (24 HSPs)
chr2 (172-221)||(34188889-34188938)
chr2 (251-310)||(44821441-44821500)
chr2 (249-307)||(960522-960579)
chr2 (172-221)||(15362472-15362521)
chr2 (172-221)||(38073109-38073158)
chr2 (172-221)||(41555434-41555483)
chr2 (177-221)||(8333894-8333938)
chr2 (176-220)||(8362405-8362449)
chr2 (251-310)||(40305485-40305544)
chr2 (179-221)||(45690502-45690544)
chr2 (172-221)||(40810773-40810822)
chr2 (172-220)||(12071508-12071556)
chr2 (173-221)||(12182914-12182962)
chr2 (251-310)||(45555215-45555274)
chr2 (187-221)||(11088595-11088629)
chr2 (187-221)||(37781869-37781903)
chr2 (172-221)||(9589469-9589517)
chr2 (188-221)||(12002715-12002748)
chr2 (173-218)||(15334095-15334140)
chr2 (172-221)||(42640853-42640902)
chr2 (172-224)||(11598470-11598521)
chr2 (187-219)||(11986190-11986222)
chr2 (187-219)||(28318046-28318078)
chr2 (255-310)||(34118847-34118903)
[»] chr5 (24 HSPs)
chr5 (177-229)||(5140664-5140716)
chr5 (172-221)||(39939036-39939085)
chr5 (177-221)||(5512685-5512729)
chr5 (179-221)||(4429781-4429823)
chr5 (172-221)||(4039472-4039521)
chr5 (262-310)||(12095785-12095834)
chr5 (249-310)||(17731953-17732014)
chr5 (180-221)||(31588597-31588638)
chr5 (180-221)||(40524087-40524128)
chr5 (172-221)||(40756544-40756593)
chr5 (177-221)||(5204620-5204664)
chr5 (177-221)||(7080470-7080514)
chr5 (172-224)||(13119154-13119205)
chr5 (172-220)||(19189462-19189510)
chr5 (249-291)||(12198995-12199037)
chr5 (261-310)||(25537092-25537142)
chr5 (187-221)||(39979713-39979747)
chr5 (251-289)||(41863188-41863226)
chr5 (172-221)||(9604434-9604482)
chr5 (187-228)||(13593277-13593318)
chr5 (251-288)||(33761426-33761463)
chr5 (177-226)||(34901655-34901704)
chr5 (179-215)||(777157-777193)
chr5 (187-219)||(6335760-6335792)
[»] scaffold0271 (1 HSPs)
scaffold0271 (172-227)||(17015-17070)
[»] chr8 (18 HSPs)
chr8 (172-221)||(38764741-38764790)
chr8 (172-221)||(34520925-34520974)
chr8 (179-224)||(39722316-39722361)
chr8 (256-296)||(5934645-5934685)
chr8 (177-221)||(12632907-12632951)
chr8 (249-285)||(16992663-16992699)
chr8 (177-221)||(23870271-23870315)
chr8 (256-294)||(2292995-2293033)
chr8 (172-218)||(12107490-12107536)
chr8 (187-221)||(28886051-28886085)
chr8 (177-218)||(41598-41639)
chr8 (177-226)||(31893331-31893380)
chr8 (177-221)||(9508860-9508904)
chr8 (179-219)||(12801467-12801507)
chr8 (177-221)||(30777275-30777319)
chr8 (262-309)||(32554905-32554953)
chr8 (177-221)||(32887669-32887713)
chr8 (187-219)||(44636926-44636958)
[»] chr6 (17 HSPs)
chr6 (172-221)||(10887812-10887861)
chr6 (172-221)||(10965978-10966027)
chr6 (172-221)||(24249160-24249209)
chr6 (179-227)||(19474033-19474081)
chr6 (172-226)||(14507975-14508029)
chr6 (172-221)||(1705960-1706009)
chr6 (172-233)||(21294144-21294205)
chr6 (172-228)||(1371750-1371806)
chr6 (172-228)||(1379498-1379554)
chr6 (256-310)||(31383547-31383602)
chr6 (174-220)||(7344325-7344371)
chr6 (179-221)||(16893259-16893301)
chr6 (172-221)||(2994325-2994374)
chr6 (187-219)||(926912-926944)
chr6 (179-219)||(6295739-6295779)
chr6 (179-219)||(6302549-6302589)
chr6 (187-219)||(14872332-14872364)
[»] chr3 (30 HSPs)
chr3 (249-306)||(45645263-45645319)
chr3 (177-221)||(29698325-29698369)
chr3 (177-233)||(38297229-38297285)
chr3 (180-219)||(8353067-8353106)
chr3 (174-221)||(48795442-48795489)
chr3 (174-225)||(51996418-51996469)
chr3 (177-228)||(52058510-52058561)
chr3 (172-226)||(32121897-32121951)
chr3 (172-226)||(43903427-43903481)
chr3 (172-220)||(15298216-15298264)
chr3 (177-221)||(41982393-41982437)
chr3 (177-221)||(45633524-45633568)
chr3 (181-220)||(4393510-4393549)
chr3 (172-219)||(25480303-25480350)
chr3 (256-309)||(5846367-5846421)
chr3 (173-227)||(19547845-19547898)
chr3 (187-221)||(29815498-29815532)
chr3 (179-221)||(35375514-35375556)
chr3 (187-225)||(47175838-47175876)
chr3 (187-224)||(5335363-5335400)
chr3 (249-310)||(7639974-7640035)
chr3 (182-223)||(13867061-13867102)
chr3 (177-218)||(29385042-29385083)
chr3 (179-220)||(52776453-52776494)
chr3 (187-219)||(4521274-4521306)
chr3 (172-220)||(11510721-11510769)
chr3 (187-219)||(20199717-20199749)
chr3 (172-224)||(23456813-23456864)
chr3 (249-305)||(33886508-33886564)
chr3 (249-289)||(47410382-47410422)


Alignment Details
Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 11546024 - 11546111
Alignment:
Q  248 gtgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaa-ccctaagatcaacctttatattcta 334  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  11546024 gtgaaattagttagattttgattaaaattatacgtataaatatttttaatttcaaattgtaacccctaagatcaacctttatattcta 11546111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 11545301 - 11545373
Alignment:
Q  10 ataattctcaaactaaagaatatgttttaagaaag-nnnnnnngtttaaagaaagaattatgttcaccaaaga 81  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||| ||||||    
T  11545301 ataattctcaaactaaagaatatgttttaagaaagttttttttgtttaaagaaagaattatgttcaacaaaga 11545373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 51004842 - 51004796
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaa 218  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||    
T  51004842 gaagtaggagtaccggtacacctcaatttgtgaggtgtaccgtagaa 51004796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 40054942 - 40054991
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  40054942 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 40054991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 43146777 - 43146823
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  43146777 gaagtaggagtaccagtacacctcaatttg--aggtgtaccgtagaagt 43146823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 43916398 - 43916349
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  43916398 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 43916349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 44979229 - 44979276
Alignment:
Q  173 aagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||    
T  44979229 aagtaggagtaccagtacaccttaatttatgaggtgtaccgtagaagt 44979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 1845125 - 1845076
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||| ||||||||||||    
T  1845125 gaagcaggagtaccggtacacctcaatttgtgaggtgcaccgtagaagtt 1845076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 7435868 - 7435917
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| |||||||||  ||||||||||||||| ||||||||||||||||||    
T  7435868 gaaggaggagtaccgatacacctcaatttgtgaggtgtaccgtagaagtt 7435917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 26542826 - 26542769
Alignment:
Q  253 attatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    |||| |||||||||||||||||||||| ||||| |||||||| |||| ||||| ||||    
T  26542826 attagttagattttgattaaaattatatgtatatatatttgtgattttaaattttaac 26542769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 26423893 - 26423845
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||| |||||||| ||||| | |||||||||||||||||    
T  26423893 gaagtaggagtaccggtacaccttaatttatgaggtgtaccgtagaagt 26423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 9047263 - 9047216
Alignment:
Q  258 ttagattttgattaaaattatacgtataaatatttgtaatttcaaatt 305  Q
    |||||||||||||||||||||   ||||||||||||| ||||||||||    
T  9047263 ttagattttgattaaaattatgtatataaatatttgtgatttcaaatt 9047216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 23539987 - 23539945
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| |||||||||||||| | ||||||||||||||||||    
T  23539987 gagtaccggtacacctcaatttctgaggtgtaccgtagaagtt 23539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 45650368 - 45650418
Alignment:
Q  178 ggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaat 228  Q
    |||||||| ||||| |||||||||| |||| ||||||||||||| ||||||    
T  45650368 ggagtaccggtacatctcaatttgtgaggtataccgtagaagttcccaaat 45650418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 31530358 - 31530310
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| |||||||||||||||||||| ||||||| |||||| |||||||||    
T  31530358 gaagcaggagtaccagtacacctcattttgtaa-gtgtacggtagaagtt 31530310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 39275719 - 39275760
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaatattt 292  Q
    ||||||||| |||||||||| |||||||| ||||||||||||    
T  39275719 aaattattttgattttgattcaaattatatgtataaatattt 39275760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 41103625 - 41103584
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaatattt 292  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  41103625 aaataattttgattttgattaaaattataggtataaatattt 41103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 44808759 - 44808808
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||| | |||||||||||||||| || |||||||||||||||    
T  44808759 gaagcaggagtatcggtacacctcaatttgtgagatgtaccgtagaagtt 44808808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 4156140 - 4156184
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||    
T  4156140 aggagtaccggtacactccaatttgtgaggtgtaccgtagaagtt 4156184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 21968054 - 21968018
Alignment:
Q  256 atttagattttgattaaaattatacgtataaatattt 292  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  21968054 attttgattttgattaaaattataagtataaatattt 21968018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 23582165 - 23582133
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  23582165 gtacacctcaatttgtgaggtgtaccgtagaag 23582133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 32912256 - 32912208
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaa 227  Q
    |||||||  ||||||||||||||| |||||||| ||||||||| |||||    
T  32912256 gagtaccgatacacctcaatttgtgaggtgtactgtagaagttcccaaa 32912208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 46235196 - 46235235
Alignment:
Q  181 gtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  46235196 gtaccagtacacctcattttgtaa-gtgtaccgtagaagtt 46235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 47458897 - 47458929
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  47458897 gtacacctcaatttgtgaggtgtaccgtagaag 47458929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 49982503 - 49982459
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| | |||||||||||||| | ||||||||||||||||||    
T  49982503 aggagtatcggtacacctcaatttatgaggtgtaccgtagaagtt 49982459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 38859589 - 38859642
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttcca 225  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  38859589 gaagtaggagtaccagtacacctcaatttataaggtgtaccgtagaagtctcca 38859642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 45688116 - 45688176
Alignment:
Q  250 gaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    ||||||| ||||||||| |||||| |||||||||||||| ||||| |||||||||||||||    
T  45688116 gaaattagttagattttaattaaatttatacgtataaatgtttgtgatttcaaattgtaac 45688176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 21919740 - 21919691
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  21919740 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 21919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 23182442 - 23182393
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  23182442 gaagcaggagtaccagtacaccttaatttgtgaggtgtaccgtagaagtt 23182393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 5215384 - 5215434
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaa 227  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| |||||    
T  5215384 aggagtaccggtacacctcaatttgtgatgtgtaccgtagaagttcccaaa 5215434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 41769338 - 41769288
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagttt 222  Q
    |||| |||||||||||||||||||||||| | ||||||| |||||||||||    
T  41769338 gaagcaggagtaccagtacacctcaatttatgaggtgtatcgtagaagttt 41769288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 29688976 - 29688927
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||| | ||||||||||||||||||    
T  29688976 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtagaagtt 29688927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 31743656 - 31743705
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  31743656 gaagcaggagtaccggtacaccacaatttgtgaggtgtaccgtagaagtt 31743705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 48460303 - 48460247
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaat 228  Q
    |||| ||||||||| ||| |||||||||||| ||||||||| |||||||| ||||||    
T  48460303 gaagcaggagtaccggtatacctcaatttgtgaggtgtaccatagaagttcccaaat 48460247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 38114762 - 38114820
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    |||||| |||||||||||||||| | ||| |||||||| ||||| |||||||||||||||    
T  38114762 aaattagttagattttgattaaagt-atatgtataaatgtttgtgatttcaaattgtaac 38114820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 27425550 - 27425584
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtata 285  Q
    ||||||||||||||||||||||||||||| |||||    
T  27425550 aaattatttagattttgattaaaattatatgtata 27425584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 31309915 - 31309865
Alignment:
Q  261 gattttgattaaaattatacgtataaatatttgt-aatttcaaattgtaac 310  Q
    ||||||||||||||||||| ||| |||||||||| | ||||||||||||||    
T  31309915 gattttgattaaaattataagtacaaatatttgtgactttcaaattgtaac 31309865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 38882863 - 38882821
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||    
T  38882863 gagtaccggtacacctcattttgttaggtgtaccgtagaagtt 38882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 7809993 - 7810042
Alignment:
Q  262 attttgattaaaattatacgtataaatatttgt-aatttcaaattgtaac 310  Q
    |||||||||||||||||| ||| |||||||||| | ||||||||||||||    
T  7809993 attttgattaaaattataagtacaaatatttgtgactttcaaattgtaac 7810042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 15716261 - 15716309
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||| |||||||||| ||||| | ||||||||||||||||    
T  15716261 gaagtaggagtaccggtacacctcattttgtga-gtgtaccgtagaagtt 15716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 32823461 - 32823510
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||| | ||||||||||||||||  |||||||||||||||||    
T  32823461 gaagcaggagtatcggtacacctcaatttgtttggtgtaccgtagaagtt 32823510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 42584116 - 42584165
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||| | |||||| ||||||||| ||||||||||||||||||    
T  42584116 gaagcaggagtatcggtacacatcaatttgtgaggtgtaccgtagaagtt 42584165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 2932613 - 2932581
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    ||||||||||||||||||||| |||||||||||    
T  2932613 gtacacctcaatttgtaaggtttaccgtagaag 2932581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 10039859 - 10039919
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaata-tttgtaatttcaaattgtaac 310  Q
    ||||||||| ||||||| ||||||||||| ||||| ||| |||| ||||||| ||||||||    
T  10039859 aaattattttgattttggttaaaattataggtatacatattttgcaatttcatattgtaac 10039919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 22639404 - 22639372
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  22639404 gtacacctcaatttgtgaggtgtaccgtagaag 22639372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 27567211 - 27567163
Alignment:
Q  173 aagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||| ||||||| |||||||| ||||||| |||||||||||| |||||    
T  27567211 aagtaagagtaccggtacacctaaatttgtgaggtgtaccgtaaaagtt 27567163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 27800073 - 27800033
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    ||||||| |||||||||||||| | ||||||||||||||||    
T  27800073 gagtaccggtacacctcaatttatgaggtgtaccgtagaag 27800033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 19595286 - 19595335
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  19595286 gaagcaggagtatcagtacacctcaatttgtaaggtgtaccgtagaagtt 19595335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 49286740 - 49286693
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  49286740 gaagtaggagtaccggtacacctcaatttgtgaggtgtaccgtagaag 49286693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 595348 - 595302
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaa 218  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||    
T  595348 gaagtaggagtaccggtacacctcaatttgtgaggtgtaccgtagaa 595302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 19527078 - 19527127
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  19527078 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 19527127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 32570722 - 32570771
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  32570722 gaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 32570771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 39103589 - 39103540
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  39103589 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 39103540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 9579716 - 9579668
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||    
T  9579716 gaagtaggagtaccagtacaactcaatttatgaggtgtaccgtagaagt 9579668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 9585411 - 9585363
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||    
T  9585411 gaagtaggagtaccagtacaactcaatttatgaggtgtaccgtagaagt 9585363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 27950303 - 27950261
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  27950303 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 27950261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 12756357 - 12756406
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||||||    
T  12756357 gaagcaggaataccggtacacctcaatttgtgaggtgtaccgtagaagtt 12756406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 25607735 - 25607694
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  25607735 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagt 25607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 50080830 - 50080891
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    |||||||| |||||||||||||||||||||| ||||  |  ||||| |||||||||||||||    
T  50080830 tgaaattagttagattttgattaaaattatatgtatggacgtttgtgatttcaaattgtaac 50080891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 4491215 - 4491259
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||    
T  4491215 aggagtaccggtacacctcaatttatgaggtgtaccgtagaagtt 4491259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 6807033 - 6806989
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||    
T  6807033 aggagtatccgtacacctcaatttgcaaggtgtaccgtagaagtt 6806989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 22789629 - 22789585
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  22789629 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagtt 22789585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 53973508 - 53973464
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtag 216  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||    
T  53973508 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtag 53973464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 18051817 - 18051778
Alignment:
Q  181 gtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  18051817 gtaccagtacacctcaatttatgaggtgtaccgtagaagt 18051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 34584228 - 34584185
Alignment:
Q  178 ggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||| | |||||||||||||||| ||||||||||||||||||    
T  34584228 ggagtatcggtacacctcaatttgtgaggtgtaccgtagaagtt 34584185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 24566412 - 24566370
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||    
T  24566412 gagtaccggtacacctcattttgttaggtgtaccgtagaagtt 24566370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 26492533 - 26492483
Alignment:
Q  261 gattttgattaaaattatacgtataaatatttgtaa-tttcaaattgtaac 310  Q
    ||||||||||||||||||| ||||| |||||||||| ||| ||||||||||    
T  26492533 gattttgattaaaattataagtatatatatttgtaactttaaaattgtaac 26492483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 30168145 - 30168099
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttc 223  Q
    ||||||| | |||||| ||||||||| ||||||||||||||||||||    
T  30168145 aggagtatcggtacacttcaatttgtgaggtgtaccgtagaagtttc 30168099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 47806411 - 47806449
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaata 289  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  47806411 aaattattttgattttgattaaaattataggtataaata 47806449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 56361366 - 56361313
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaa 226  Q
    ||||||||||||||| ||||||| ||||||   ||||||||||||||||||||||    
T  56361366 gaagtaggagtaccaatacaccttaatttgcg-ggtgtaccgtagaagtttccaa 56361313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 3690883 - 3690916
Alignment:
Q  188 tacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||||||||| ||||||||||||||||||    
T  3690883 tacacctcaatttgtgaggtgtaccgtagaagtt 3690916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 9625558 - 9625509
Alignment:
Q  262 attttgattaaaattatacgtataaatatttgt-aatttcaaattgtaac 310  Q
    |||||||||||||||||| || ||||||||||| | ||||||||||||||    
T  9625558 attttgattaaaattataagtgtaaatatttgtgattttcaaattgtaac 9625509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 34927138 - 34927105
Alignment:
Q  188 tacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||||||||| ||||||||||||||||||    
T  34927138 tacacctcaatttgtgaggtgtaccgtagaagtt 34927105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 7456541 - 7456597
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaatt 305  Q
    |||||||| |||| ||||| ||||||||||| ||||| || ||||| ||||||||||    
T  7456541 tgaaattagttagcttttgtttaaaattatatgtatagatgtttgtgatttcaaatt 7456597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 13273226 - 13273254
Alignment:
Q  251 aaattatttagattttgattaaaattata 279  Q
    |||||||||||||||||||||||||||||    
T  13273226 aaattatttagattttgattaaaattata 13273254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 17281811 - 17281779
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  17281811 gtacacctcaatttgtgaggtgtaccgtagaag 17281779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 17370313 - 17370281
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  17370313 gtacacctcaatttgtgaggtgtaccgtagaag 17370281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 21722552 - 21722596
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| | ||||||| |||||||| ||||||||||||||||||    
T  21722552 aggagtatcggtacaccccaatttgtgaggtgtaccgtagaagtt 21722596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 33997631 - 33997679
Alignment:
Q  262 attttgattaaaattatacgtataaatatttgt-aatttcaaattgtaa 309  Q
    ||||||||||||||||||| |||| |||||||| ||||| |||||||||    
T  33997631 attttgattaaaattatacatatagatatttgtgaattttaaattgtaa 33997679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 36196632 - 36196596
Alignment:
Q  256 atttagattttgattaaaattatacgtataaatattt 292  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  36196632 attttgattttgattaaaattatatgtataaatattt 36196596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 43349086 - 43349050
Alignment:
Q  190 cacctcaatttgtaaggtgtaccgtagaagtttccaa 226  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  43349086 cacctcaatttgtgaggtgtaccgtagaagttcccaa 43349050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 48207447 - 48207479
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  48207447 gtacacctcaatttgtgaggtgtaccgtagaag 48207479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 52324013 - 52323969
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| | |||||||||||||||| |||||||||| |||||||    
T  52324013 aggagtatcggtacacctcaatttgtgaggtgtaccgcagaagtt 52323969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 54178789 - 54178821
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  54178789 gtacacctcaatttgtgaggtgtaccgtagaag 54178821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 34188889 - 34188938
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  34188889 gaagcaggagtaccggtacacctcaatttgtaaggtgtaccgtagaagtt 34188938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 44821500 - 44821441
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||| ||||| ||||||||    
T  44821500 aaattatttagattttgtttaaaattataggtatagatatttgtactttcatattgtaac 44821441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 960522 - 960579
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgt 307  Q
    |||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  960522 tgaaattagttagatttt-attaaaattatacgtatatatttttgtaatttcaaattgt 960579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 15362521 - 15362472
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||||||    
T  15362521 gaagcaggagtaccggtacacctcaatttataaggtgtaccgtagaagtt 15362472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 38073158 - 38073109
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  38073158 gaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 38073109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 41555483 - 41555434
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  41555483 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 41555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 8333938 - 8333894
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  8333938 aggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 8333894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 8362449 - 8362405
Alignment:
Q  176 taggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  8362449 taggagtaccagtacacctcaatttatgaggtgtaccgtagaagt 8362405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 40305544 - 40305485
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    |||||| ||| |||||||||||||||||||||| | || |||||||||||||| ||||||    
T  40305544 aaattagttatattttgattaaaattatacgtaaagatgtttgtaatttcaaagtgtaac 40305485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 45690544 - 45690502
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  45690544 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 45690502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 40810773 - 40810822
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||||||    
T  40810773 gaagcaggagtaccggtacacctcaatttgtaaaatgtaccgtagaagtt 40810822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 12071508 - 12071556
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||| |||||||||||||| | ||||||| |||||||||    
T  12071508 gaagtaggagtaccggtacacctcaatttatgaggtgtaacgtagaagt 12071556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 12182914 - 12182962
Alignment:
Q  173 aagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||| ||||||| |||||||||| ||||| ||||||||||||||||||    
T  12182914 aagtaagagtaccggtacacctcattttgttaggtgtaccgtagaagtt 12182962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 45555274 - 45555215
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    |||||| ||| ||||||||||||||||||| |||| || ||||| |||||||| ||||||    
T  45555274 aaattagttaaattttgattaaaattatacatatagatgtttgtgatttcaaactgtaac 45555215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 11088595 - 11088629
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||||| ||||||||||||||||||    
T  11088595 gtacacctcaatttgtgaggtgtaccgtagaagtt 11088629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Complemental strand, 37781903 - 37781869
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||||| ||||||||||||||||||    
T  37781903 gtacacctcaatttgtgaggtgtaccgtagaagtt 37781869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 9589469 - 9589517
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||| |||||||||| ||||| | ||||||||||||||||    
T  9589469 gaagtaggagtaccggtacacctcattttgtga-gtgtaccgtagaagtt 9589517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 12002715 - 12002748
Alignment:
Q  188 tacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||||||||| ||||||||||||||||||    
T  12002715 tacacctcaatttgtgaggtgtaccgtagaagtt 12002748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 15334140 - 15334095
Alignment:
Q  173 aagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaa 218  Q
    |||||||| |||| |||||||||||||||| | |||||||||||||    
T  15334140 aagtaggaataccggtacacctcaatttgtgaagtgtaccgtagaa 15334095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 42640902 - 42640853
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||| ||||||| ||| |||||||||||| |||||| |||||||||||    
T  42640902 gaagtaagagtaccggtatacctcaatttgtgaggtgtgccgtagaagtt 42640853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 11598470 - 11598521
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttcc 224  Q
    |||||||||||| | |||||||| |||||| | ||||||||||||||||||||    
T  11598470 gaagtaggagtatcggtacaccttaatttgca-ggtgtaccgtagaagtttcc 11598521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 11986222 - 11986190
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  11986222 gtacacctcaatttgtgaggtgtaccgtagaag 11986190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 28318078 - 28318046
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  28318078 gtacacctcaatttgtgaggtgtaccgtagaag 28318046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 34118847 - 34118903
Alignment:
Q  255 tatttagattttgattaaaattatacgtataaatatttgt-aatttcaaattgtaac 310  Q
    ||||| ||||||||||||||||||| ||| ||||||| || | ||||||||||||||    
T  34118847 tattttgattttgattaaaattataagtacaaatattcgtgactttcaaattgtaac 34118903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 5140716 - 5140664
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaatt 229  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  5140716 aggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtttcctaatt 5140664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 39939085 - 39939036
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  39939085 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 39939036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 5512729 - 5512685
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  5512729 aggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 5512685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 4429781 - 4429823
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  4429781 gagtaccaatacacctcaatttgtgaggtgtaccgtagaagtt 4429823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 4039521 - 4039472
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||| ||||||| |||||||| ||||||| ||||||||||||||||||    
T  4039521 gaagtaagagtaccggtacaccttaatttgtgaggtgtaccgtagaagtt 4039472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 12095785 - 12095834
Alignment:
Q  262 attttgattaaaattatacgtataaatatttgtaa-tttcaaattgtaac 310  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  12095785 attttgattaaaattataagtacaaatatttgtaactttcaaattgtaac 12095834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 17731953 - 17732014
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    ||||| || ||||||||||||||||||||||||||| ||| ||||   ||||||||||||||    
T  17731953 tgaaaataattagattttgattaaaattatacgtattaatgtttgcggtttcaaattgtaac 17732014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 31588597 - 31588638
Alignment:
Q  180 agtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  31588597 agtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 31588638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 40524128 - 40524087
Alignment:
Q  180 agtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  40524128 agtaccagtacaccccaatttgtgaggtgtaccgtagaagtt 40524087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 40756593 - 40756544
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| |||||||||  ||||||||||||||| ||||||||||||||||||    
T  40756593 gaagcaggagtaccgatacacctcaatttgtgaggtgtaccgtagaagtt 40756544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 5204664 - 5204620
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||    
T  5204664 aggagtaccgatacacctcaatttgtgaggtgtaccgtagaagtt 5204620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 7080470 - 7080514
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  7080470 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagtt 7080514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 13119154 - 13119205
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttcc 224  Q
    |||| ||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  13119154 gaagcaggagtaccggtacacctcactttgtaag-tgtaccgtagaagtttcc 13119205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 19189462 - 19189510
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    ||||||||||||| || |||||||||||| | |||||||||||||||||    
T  19189462 gaagtaggagtacgagcacacctcaatttatgaggtgtaccgtagaagt 19189510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Complemental strand, 12199037 - 12198995
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatt 291  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||    
T  12199037 tgaaattattttgatttagattaaaattataggtataaatatt 12198995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 25537142 - 25537092
Alignment:
Q  261 gattttgattaaaattatacgtataaatatttgt-aatttcaaattgtaac 310  Q
    ||||||||||||||||||| ||| |||||||||| | ||||||||||||||    
T  25537142 gattttgattaaaattataagtacaaatatttgtgactttcaaattgtaac 25537092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 39979713 - 39979747
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||||| ||||||||||||||||||    
T  39979713 gtacacctcaatttgtgaggtgtaccgtagaagtt 39979747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 41863188 - 41863226
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaata 289  Q
    |||||| || |||||||||||||||||||||||||||||    
T  41863188 aaattaatttgattttgattaaaattatacgtataaata 41863226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 9604482 - 9604434
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||| |||||||||| ||||| | ||||||||||||||||    
T  9604482 gaagtaggagtaccggtacacctcattttgtga-gtgtaccgtagaagtt 9604434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 13593318 - 13593277
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtttccaaat 228  Q
    |||||||||||||||| |||||||||||||||| | ||||||    
T  13593318 gtacacctcaatttgtgaggtgtaccgtagaagctcccaaat 13593277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 33761463 - 33761426
Alignment:
Q  251 aaattatttagattttgattaaaattatacgtataaat 288  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  33761463 aaattattttgattttgattaaaattataggtataaat 33761426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 34901704 - 34901655
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaa 226  Q
    ||||||||| ||||||| |||||| | |||||||||||||||||| ||||    
T  34901704 aggagtaccggtacaccccaatttatgaggtgtaccgtagaagttcccaa 34901655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 777193 - 777157
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgta 215  Q
    |||||||||||||||||||||||| || |||||||||    
T  777193 gagtaccagtacacctcaatttgtgagatgtaccgta 777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 6335760 - 6335792
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  6335760 gtacacctcaatttgtgaggtgtaccgtagaag 6335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 17015 - 17070
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaa 227  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||| |||||    
T  17015 gaagtaggagtatcggtacacctcaatttgtgaggtgtaccgtagaagttcccaaa 17070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 38764790 - 38764741
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  38764790 gaagcaggagtaccgatacacctcaatttgtaaggtgtaccgtagaagtt 38764741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 34520925 - 34520974
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  34520925 gaagtaggagtatcgatacacctcaatttgtgaggtgtaccgtagaagtt 34520974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 39722316 - 39722361
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttcc 224  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||    
T  39722316 gagtactagtacacctcaatttatgaggtgtaccgtagaagtttcc 39722361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 5934645 - 5934685
Alignment:
Q  256 atttagattttgattaaaattatacgtataaatatttgtaa 296  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  5934645 attttgattttgattaaaattataagtataaatatttgtaa 5934685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 12632951 - 12632907
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||    
T  12632951 aggagtatcggtacacctcaatttgtgaggtgtaccgtagaagtt 12632907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 16992663 - 16992699
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtata 285  Q
    |||||||| ||||||||||||||||||||||||||||    
T  16992663 tgaaattagttagattttgattaaaattatacgtata 16992699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 23870315 - 23870271
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  23870315 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagtt 23870271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 2293033 - 2292995
Alignment:
Q  256 atttagattttgattaaaattatacgtataaatatttgt 294  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  2293033 atttagattttgattaaaattatatgtataaatgtttgt 2292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 12107536 - 12107490
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaa 218  Q
    |||||||||||||| |||||||||||||| | || ||||||||||||    
T  12107536 gaagtaggagtaccggtacacctcaatttatgagatgtaccgtagaa 12107490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 28886051 - 28886085
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||||| ||||||||||||||||||    
T  28886051 gtacacctcaatttgtgaggtgtaccgtagaagtt 28886085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 41639 - 41598
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaa 218  Q
    ||||||||| ||||||| |||||||| |||||||||||||||    
T  41639 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaa 41598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 31893380 - 31893331
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaa 226  Q
    ||||||| | |||||||||||||||| ||||||| |||||||||| ||||    
T  31893380 aggagtatcggtacacctcaatttgtgaggtgtaacgtagaagttcccaa 31893331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 9508904 - 9508860
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| |||||||  ||||||| ||||||||||||||||||    
T  9508904 aggagtaccggtacaccctaatttgtgaggtgtaccgtagaagtt 9508860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 12801467 - 12801507
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    ||||||| |||||||||||||| | ||||||||||||||||    
T  12801467 gagtaccggtacacctcaatttatgaggtgtaccgtagaag 12801507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 30777319 - 30777275
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| | |||||||||||||| | ||||||||||||||||||    
T  30777319 aggagtatcggtacacctcaatttatgaggtgtaccgtagaagtt 30777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 32554953 - 32554905
Alignment:
Q  262 attttgattaaaattatacgtataaatatttgt-aatttcaaattgtaa 309  Q
    |||||||||||||||||| ||| |||||||||| | |||||||||||||    
T  32554953 attttgattaaaattataagtacaaatatttgtgactttcaaattgtaa 32554905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 32887713 - 32887669
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| |||||||||||||| | || |||||||||||||||    
T  32887713 aggagtaccggtacacctcaatttatgagatgtaccgtagaagtt 32887669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 44636958 - 44636926
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  44636958 gtacacctcaatttgtgaggtgtaccgtagaag 44636926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 10887861 - 10887812
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  10887861 gaagtaggagtaccggtacacctcaatttatgaggtgtaccgtagaagtt 10887812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 10965978 - 10966027
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  10965978 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 10966027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 24249160 - 24249209
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  24249160 gaagcaggagtaccgatacacctcaatttgtaaggtgtaccgtagaagtt 24249209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 19474033 - 19474081
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaa 227  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  19474033 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccaaa 19474081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 14507975 - 14508029
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaa 226  Q
    |||| ||||||||| |||||||||||||| | |||||||||||||||||| ||||    
T  14507975 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttcccaa 14508029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 1705960 - 1706009
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||| | ||||||||||||||||||    
T  1705960 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtagaagtt 1706009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 21294144 - 21294205
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaattatta 233  Q
    |||| ||||||||| |||||||||||||| | ||||||||||||| |||| || ||||||||    
T  21294144 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtaggagttccctaattatta 21294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 1371750 - 1371806
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaat 228  Q
    |||| |||||||||  ||||||||||||||| |||| || |||||||||||||||||    
T  1371750 gaaggaggagtaccgatacacctcaatttgtgaggtatatcgtagaagtttccaaat 1371806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 1379498 - 1379554
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaat 228  Q
    |||| |||||||||  ||||||||||||||| |||| || |||||||||||||||||    
T  1379498 gaaggaggagtaccgatacacctcaatttgtgaggtatatcgtagaagtttccaaat 1379554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 31383602 - 31383547
Alignment:
Q  256 atttagattttgattaaaattatacgtataaatatttgta-atttcaaattgtaac 310  Q
    |||| ||||||||||||||||||| ||| |||||||||||  ||||||||||||||    
T  31383602 attttgattttgattaaaattataagtacaaatatttgtatttttcaaattgtaac 31383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 7344371 - 7344325
Alignment:
Q  174 agtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||| |||||||||||||| |  ||||||||||||||||    
T  7344371 agtaggagtaccggtacacctcaatttatgtggtgtaccgtagaagt 7344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 16893259 - 16893301
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||    
T  16893259 gagtaccggtacacctcaatttgtgaggtgtaccatagaagtt 16893301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 2994374 - 2994325
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||||| |||||||||||||| | |||||||| |||||||||    
T  2994374 gaagcaggagtaccggtacacctcaatttatgaggtgtactgtagaagtt 2994325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 926912 - 926944
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||| ||||||||||||||||||    
T  926912 gtacacctcaatttataaggtgtaccgtagaag 926944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 6295739 - 6295779
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||  ||||||||||||||| ||||||||||||||||    
T  6295739 gagtaccgatacacctcaatttgtgaggtgtaccgtagaag 6295779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 6302549 - 6302589
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||  ||||||||||||||| ||||||||||||||||    
T  6302549 gagtaccgatacacctcaatttgtgaggtgtaccgtagaag 6302589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 14872364 - 14872332
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  14872364 gtacacctcaatttgtgaggtgtaccgtagaag 14872332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 45645263 - 45645319
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattg 306  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  45645263 tgaaattagttagattttgattaaaattatac-tatagatatttgttatttcaaattg 45645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 29698369 - 29698325
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  29698369 aggagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 29698325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 38297229 - 38297285
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaattatta 233  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  38297229 aggagtatcggtacacctcaatttgtaaggtgtactgtagaagttcccatattatta 38297285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 8353106 - 8353067
Alignment:
Q  180 agtaccagtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  8353106 agtaccaatacacctcaatttgtaaggtgtaccgtagaag 8353067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 48795489 - 48795442
Alignment:
Q  174 agtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  48795489 agtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 48795442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 51996469 - 51996418
Alignment:
Q  174 agtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttcca 225  Q
    |||||||||| | |||||||||||||||| | ||||||||||||||||||||    
T  51996469 agtaggagtatcggtacacctcaatttgtgatgtgtaccgtagaagtttcca 51996418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 52058561 - 52058510
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaat 228  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||| ||||||    
T  52058561 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagttcccaaat 52058510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 32121951 - 32121897
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaa 226  Q
    |||| ||||||||| |||||||||| ||||| |||||||||||||||||| ||||    
T  32121951 gaagcaggagtaccggtacacctcactttgtgaggtgtaccgtagaagttcccaa 32121897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 43903427 - 43903481
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaa 226  Q
    |||| |||||||||  ||||||||||||||| |||||||||||||||||| ||||    
T  43903427 gaaggaggagtaccgatacacctcaatttgtgaggtgtaccgtagaagttcccaa 43903481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 15298264 - 15298216
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||| |||||||||||||||||||||| | |||||||| ||||||||    
T  15298264 gaagtaagagtaccagtacacctcaatttatgaggtgtacagtagaagt 15298216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 41982437 - 41982393
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  41982437 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagtt 41982393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 45633524 - 45633568
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||    
T  45633524 aggagtaccggtacaccccaatttgtaaggtgtaccgcagaagtt 45633568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 4393510 - 4393549
Alignment:
Q  181 gtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  4393510 gtaccagtacacctcaatttatgaggtgtaccgtagaagt 4393549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 25480350 - 25480303
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||| ||||||  ||||||||||||||||||||||||||| |||||    
T  25480350 gaagtaagagtactggtacacctcaatttgtaaggtgtaccgcagaag 25480303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 5846421 - 5846367
Alignment:
Q  256 atttagattttgattaaaattatacgtataaatatttgt-aatttcaaattgtaa 309  Q
    |||| ||||||||||||||||| | |||||||||||||| | |||||||||||||    
T  5846421 attttgattttgattaaaattacaagtataaatatttgtgactttcaaattgtaa 5846367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 19547845 - 19547898
Alignment:
Q  173 aagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttccaaa 227  Q
    ||||||||||||| |||||||| |||||||  ||||||||||||||||| |||||    
T  19547845 aagtaggagtaccggtacaccttaatttgt-gggtgtaccgtagaagttcccaaa 19547898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 29815498 - 29815532
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||||||||||| ||||||||||||||||||    
T  29815498 gtacacctcaatttgtgaggtgtaccgtagaagtt 29815532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 35375556 - 35375514
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagtt 221  Q
    |||||||  ||||||||||||||| ||||||||||||||||||    
T  35375556 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagtt 35375514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 47175838 - 47175876
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtttcca 225  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  47175838 gtacacctcaatttatgaggtgtaccgtagaagtttcca 47175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 5335400 - 5335363
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaagtttcc 224  Q
    |||||||||||||||| || ||||||||||||||||||    
T  5335400 gtacacctcaatttgtgagatgtaccgtagaagtttcc 5335363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 7639974 - 7640035
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaattgtaac 310  Q
    |||||||| ||| ||||||||| |||||||||||||| || ||||  |||| ||||||||||    
T  7639974 tgaaattagttatattttgattgaaattatacgtatagatgtttgcgattttaaattgtaac 7640035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 13867102 - 13867061
Alignment:
Q  182 taccagtacacctcaatttgtaaggtgtaccgtagaagtttc 223  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  13867102 taccaatacagctcaatttgtgaggtgtaccgtagaagtttc 13867061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 29385042 - 29385083
Alignment:
Q  177 aggagtaccagtacacctcaatttgtaaggtgtaccgtagaa 218  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  29385042 aggagtatcggtacacctcaatttgtgaggtgtaccgtagaa 29385083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 52776494 - 52776453
Alignment:
Q  179 gagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    ||||||| |||||||||||||| | |||||||||||||||||    
T  52776494 gagtaccggtacacctcaatttatgaggtgtaccgtagaagt 52776453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 4521306 - 4521274
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  4521306 gtacacctcaatttgtgaggtgtaccgtagaag 4521274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 11510769 - 11510721
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagt 220  Q
    |||||||||||||| || ||||||||||| | ||||||| |||||||||    
T  11510769 gaagtaggagtaccggtgcacctcaatttatgaggtgtatcgtagaagt 11510721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 20199717 - 20199749
Alignment:
Q  187 gtacacctcaatttgtaaggtgtaccgtagaag 219  Q
    |||||||||||||||| ||||||||||||||||    
T  20199717 gtacacctcaatttgtgaggtgtaccgtagaag 20199749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 23456813 - 23456864
Alignment:
Q  172 gaagtaggagtaccagtacacctcaatttgtaaggtgtaccgtagaagtttcc 224  Q
    |||| ||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  23456813 gaagaaggagtaccggtacacctcactttgtgag-tgtaccgtagaagtttcc 23456864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 33886564 - 33886508
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaatatttgtaatttcaaatt 305  Q
    |||||||| ||  |||||||||||||||||| |||||||| ||||| |||| |||||    
T  33886564 tgaaattagttgaattttgattaaaattatatgtataaatgtttgtgattttaaatt 33886508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 47410382 - 47410422
Alignment:
Q  249 tgaaattatttagattttgattaaaattatacgtataaata 289  Q
    |||||||||||  |||||||||||||||||| |||||||||    
T  47410382 tgaaattattttaattttgattaaaattataggtataaata 47410422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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