View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2119_high_8 (Length: 269)
Name: NF2119_high_8
Description: NF2119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2119_high_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 19 - 269
Target Start/End: Complemental strand, 41468395 - 41468145
Alignment:
| Q |
19 |
aaacaaaggaaagcaagtaatgtcaggtgtatgggtatttgacaagaaaggtgtggtgaggttaataaccaacccaacaagagaatcctttgagcacaag |
118 |
Q |
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| T |
41468395 |
aaacaaaggaaagcaagtaatgtcaggtgtatgggtatttgacaagaaaggtgtggtgaggttaataaccaacccaacaagagaatccttcgagcacaag |
41468296 |
T |
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| Q |
119 |
acagaaccaggaacaggaacagcaacagcaccaggtgcaagaccaagaattcttgtatatcttccaacaaaccaagtcattcattccttctctcaacttg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41468295 |
acagaaccaggaacaggaacagcaacagcaccaggtgcaagaccaagagttcttgtatatcttccaacaaaccaagtcattcattccttctctcaacttg |
41468196 |
T |
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| Q |
219 |
agcaacgactcactgaacttggttggactcgttactctcactctcatcttc |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41468195 |
agcaacgactcactgaacttggttggactcgttactctcactctcatcttc |
41468145 |
T |
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