View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21200_low_1 (Length: 610)

Name: NF21200_low_1
Description: NF21200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21200_low_1
NF21200_low_1
[»] chr4 (3 HSPs)
chr4 (214-596)||(52350727-52351107)
chr4 (1-219)||(52351355-52351573)
chr4 (89-215)||(20297091-20297217)
[»] chr5 (18 HSPs)
chr5 (255-402)||(30474337-30474484)
chr5 (4-190)||(30474773-30474959)
chr5 (84-222)||(29871658-29871796)
chr5 (219-361)||(30522589-30522731)
chr5 (219-361)||(30562929-30563071)
chr5 (85-215)||(30749116-30749246)
chr5 (84-215)||(30242872-30243003)
chr5 (60-219)||(30522118-30522277)
chr5 (60-219)||(30562458-30562617)
chr5 (85-215)||(30399550-30399680)
chr5 (219-364)||(30429948-30430091)
chr5 (229-378)||(30399051-30399200)
chr5 (124-219)||(30430467-30430562)
chr5 (84-215)||(30482876-30483007)
chr5 (84-215)||(30713922-30714053)
chr5 (85-170)||(17982400-17982485)
chr5 (95-132)||(30206008-30206045)
chr5 (216-272)||(30205602-30205658)
[»] chr7 (1 HSPs)
chr7 (85-215)||(26706817-26706947)
[»] chr1 (2 HSPs)
chr1 (84-216)||(7098896-7099028)
chr1 (85-150)||(7582284-7582349)


Alignment Details
Target: chr4 (Bit Score: 350; Significance: 0; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 214 - 596
Target Start/End: Complemental strand, 52351107 - 52350727
Alignment:
Q  214 tgccaaactttgaacggttattgaaaatggaaaggggggagatgttccctcgtctttctgatttgaccatttgtggttgccctaaacttgtgttgcaatt 313  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52351107 tgccaaactttgaacggttattgaaaatggaaaggcgggagatgttcc---gtctttctgatttgaccatttgtggttgccctaaacttgtgttgcaatt 52351011  T
Q  314 ccttccatcccttaaagacctcattgtaattggatgtaacagtgagttactaaggccaatatctagtttccattgtcttaccacccttctgcttagtgaa 413  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52351010 ccttccatcccttaaagacctcattgtaattggatgtaacagtcagttactaaggccaatatctagtttccattgtcttaccacccttctgcttagtgaa 52350911  T
Q  414 ggtaacaaaatgacatcctttccagaaggcatgttgagaaacttgacttgtctgcaaactcttatactaactaatttcccgaaattaaaggaactaccaa 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52350910 ggtaacaaaatgacatcctttccagaaggcatgttgagaaacttgacttgtctgcaaactcttatactaactaatttcccgaaattaaaggaactaccaa 52350811  T
Q  514 atgaacccttaggcctggctttagaacgtctgc-aatttctcgttgtggtgaccttgagtcttcaccggagcaaatgttggaag 596  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52350810 atgaacccttaagcctggctttagaacgtctgcaaatttctcgttgtggtgaccttgagtcttcaccggagcaaatgttggaag 52350727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 52351355 - 52351573
Alignment:
Q  1 acacttgagatttgagtgaggttgaagcagatgaagtacttcaatagcattattggcacgtgtcttagttttaccacttttgctccatgacaggcataat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52351355 acacttgagatttgagtgaggttgaagcagatgaagtacttcaatagcattattggcacgtgtcttagttttaccactgttgctccatgacaggcataat 52351454  T
Q  101 tctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagttttccttctagcttta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52351455 tctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagttttccttctagcttta 52351554  T
Q  201 gatcacgtaactctgccaa 219  Q
    |||||||||||||||||||    
T  52351555 gatcacgtaactctgccaa 52351573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 20297217 - 20297091
Alignment:
Q  89 gacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagttttc 188  Q
    |||| |||||||||  | |||||||||||||||||||||||||| ||| || | |||||||  |||| ||||| || || |||||  || ||||||||||    
T  20297217 gacaagcataattcatgaaggtcttttttacccatcaaattggcttcttgagcttcagatatactgccaacatcttttaagcctttgatactcagttttc 20297118  T
Q  189 cttctagctttagatcacgtaactctg 215  Q
    |  | || |||||||||||||||||||    
T  20297117 caccaagttttagatcacgtaactctg 20297091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 255 - 402
Target Start/End: Complemental strand, 30474484 - 30474337
Alignment:
Q  255 atgttccctcgtctttctgatttgaccatttgtggttgccctaaacttgtgttgcaattccttccatcccttaaagacctcattgtaattggatgtaaca 354  Q
    ||||||| || ||||||| |||||||||||  || |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  30474484 atgttccttcttctttctaatttgaccattattgattgccctaaacttgtgttgccatgccttccatcccttaaagacctcattgtatttggatgtaaca 30474385  T
Q  355 gtgagttactaaggccaatatctagtttccattgtcttaccacccttc 402  Q
     ||||||||| ||  |||| || | ||||  | |||||||||||||||    
T  30474384 atgagttactgagatcaatctccaatttctgtagtcttaccacccttc 30474337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 30474773 - 30474959
Alignment:
Q  4 cttgagatttgagtgaggttgaagcagatgaagtacttcaatagcattattggcacgtgtcttagttttaccacttttgctccatgacaggcataattct 103  Q
    ||||||||||||||||||||||||||  | ||||||||    |||| || | |   |||||| ||||| |||| | || |||||||||| | ||||||||    
T  30474773 cttgagatttgagtgaggttgaagcatttcaagtacttgctcagcagtagtagttggtgtctcagtttcaccattattcctccatgacaaggataattct 30474872  T
Q  104 cggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagttttcct 190  Q
     ||||||| |||||||||||||||||||| | |||| | ||| ||||||| | ||||||| | || ||||  |||||||||||||||    
T  30474873 tggaggtcctttttacccatcaaattggcatgtcgagcttcaaataagctaccaacatttcccagaccttgtatgctcagttttcct 30474959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 29871658 - 29871796
Alignment:
Q  84 tccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcag 183  Q
    ||||||||| ||||||||   | ||||||||||||||||||||||| ||| ||  | | |||||||| |||| |||||| | ||  ||||| || |||||    
T  29871658 tccatgacaagcataattgatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaatccttcgatactcag 29871757  T
Q  184 ttttccttctagctttagatcacgtaactctgccaaact 222  Q
    ||||||  | || ||||||||||||||||||| ||||||    
T  29871758 ttttccaccgagttttagatcacgtaactctgtcaaact 29871796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 361
Target Start/End: Original strand, 30522589 - 30522731
Alignment:
Q  219 aactttgaacggttattgaaaatggaaaggggggagatgttccctcgtctttctgatttgaccatttgtggttgccctaaacttgtgttgcaattccttc 318  Q
    ||||| |||||||| |||||| ||||||  |||||||| || || || |||||| | ||| ||||   ||||||||||||||||| ||||| |  ||||     
T  30522589 aacttggaacggttgttgaaagtggaaacaggggagatttttccccgcctttctaagttggccatcgttggttgccctaaacttgggttgccacaccttt 30522688  T
Q  319 catcccttaaagacctcattgtaattggatgtaacagtgagtt 361  Q
    ||||  ||||||| |||||||||  ||||||||||| ||||||    
T  30522689 catcgtttaaagaactcattgtagatggatgtaacaatgagtt 30522731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 361
Target Start/End: Original strand, 30562929 - 30563071
Alignment:
Q  219 aactttgaacggttattgaaaatggaaaggggggagatgttccctcgtctttctgatttgaccatttgtggttgccctaaacttgtgttgcaattccttc 318  Q
    ||||| |||||||| |||||| ||||||  |||||||| || || || |||||| | ||| ||||   ||||||||||||||||| ||||| |  ||||     
T  30562929 aacttggaacggttgttgaaagtggaaacaggggagatttttccccgcctttctaagttggccatcgttggttgccctaaacttgggttgccacaccttt 30563028  T
Q  319 catcccttaaagacctcattgtaattggatgtaacagtgagtt 361  Q
    ||||  ||||||| |||||||||  ||||||||||| ||||||    
T  30563029 catcgtttaaagaactcattgtagatggatgtaacaatgagtt 30563071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 30749116 - 30749246
Alignment:
Q  85 ccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagt 184  Q
    |||||||| |||||||||  | ||||||||||||||||||||||| ||| ||  | | |||||||| |||| |||||| | ||  ||||  || ||||||    
T  30749116 ccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaatcctttgatactcagt 30749215  T
Q  185 tttccttctagctttagatcacgtaactctg 215  Q
    |||||  | || |||||||||||||||||||    
T  30749216 tttccaccgaggtttagatcacgtaactctg 30749246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 30243003 - 30242872
Alignment:
Q  84 tccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcag 183  Q
    ||||||||| |||||||||  | ||||||||||||||||||||||| ||| ||  | | |||||||| |||| |||||| | || |  ||  || |||||    
T  30243003 tccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcagataaactgccaacattgtttaagtgttggatactcag 30242904  T
Q  184 ttttccttctagctttagatcacgtaactctg 215  Q
    ||||||  | || |||||||||||||||||||    
T  30242903 ttttccaccgaggtttagatcacgtaactctg 30242872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 60 - 219
Target Start/End: Complemental strand, 30522277 - 30522118
Alignment:
Q  60 gtgtcttagttttaccacttttgctccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaac 159  Q
    ||||||| |||||||  || ||| ||||||| | ||||| |||  | || ||||||||| | |||| |||||| |||||| | ||||| || || | |||    
T  30522277 gtgtcttggttttacgcctgttgttccatgagaagcatatttcctgaagttcttttttatctatcagattggcttctcgagcttcagacaaacttccaac 30522178  T
Q  160 attttctaggccttcaatgctcagttttccttctagctttagatcacgtaactctgccaa 219  Q
    |||||||||||    |||||| ||||||||  |||||||||||||| |||| ||||||||    
T  30522177 attttctaggcaagtaatgcttagttttccccctagctttagatcatgtaattctgccaa 30522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 60 - 219
Target Start/End: Complemental strand, 30562617 - 30562458
Alignment:
Q  60 gtgtcttagttttaccacttttgctccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaac 159  Q
    ||||||| |||||||  || ||| ||||||| | ||||| |||  | || ||||||||| | |||| |||||| |||||| | ||||| || || | |||    
T  30562617 gtgtcttggttttacgcctgttgttccatgagaagcatatttcctgaagttcttttttatctatcagattggcttctcgagcttcagacaaacttccaac 30562518  T
Q  160 attttctaggccttcaatgctcagttttccttctagctttagatcacgtaactctgccaa 219  Q
    |||||||||||    |||||| ||||||||  |||||||||||||| |||| ||||||||    
T  30562517 attttctaggcaagtaatgcttagttttccccctagctttagatcatgtaattctgccaa 30562458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 30399550 - 30399680
Alignment:
Q  85 ccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagt 184  Q
    |||||||| |||||||||  | ||||||||||||||||||||||  ||| || || | | |||||| |||| || || || || |||||| || | ||||    
T  30399550 ccatgacaagcataattcatgaaggtcttttttacccatcaaatcagccgcttgagcttgagataaactgccaaaatcttttaagccttcgatacgcagt 30399649  T
Q  185 tttccttctagctttagatcacgtaactctg 215  Q
    |||||  | || |||||||||||||||||||    
T  30399650 tttccaccgaggtttagatcacgtaactctg 30399680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 364
Target Start/End: Complemental strand, 30430091 - 30429948
Alignment:
Q  219 aactttgaacggttattgaaaatggaaaggggggagatgttccctcgtctttctgatttgaccatttgtggttgccctaaacttgtgttgcaattccttc 318  Q
    ||||| |||||||| |||||| |||||| |||  |||| || || |  |||||| | ||| |||||  |||||||| |||||||| ||||| || ||||     
T  30430091 aacttggaacggttgttgaaagtggaaatggg--agatttttccccacctttctaagttggccattgttggttgccttaaacttgggttgccatgccttt 30429994  T
Q  319 catcccttaaagacctcattgtaattggatgtaacagtgagttact 364  Q
    ||||  ||||||| |||||||||  ||||||||||| |||||||||    
T  30429993 catcttttaaagaactcattgtagatggatgtaacaatgagttact 30429948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 229 - 378
Target Start/End: Complemental strand, 30399200 - 30399051
Alignment:
Q  229 ggttattgaaaatggaaaggggggagatgttccctcgtctttctgatttgaccatttgtggttgccctaaacttgtgttgcaattccttccatcccttaa 328  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||||| ||||  ||    | ||||||||||||||   ||| ||  |||||||| |||||    
T  30399200 ggttattgaaagtggaaagaggggagatgtttccttgtctttctgagttgagaatcacagcttgccctaaacttggagtgccatgtcttccatctcttaa 30399101  T
Q  329 agacctcattgtaattggatgtaacagtgagttactaaggccaatatcta 378  Q
    |  ||||  |||| | |||||||||| ||||||||| ||| |||| ||||    
T  30399100 atccctctatgtattgggatgtaacaatgagttactgaggtcaatctcta 30399051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 30430467 - 30430562
Alignment:
Q  124 caaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagttttccttctagctttagatcacgtaactctgccaa 219  Q
    |||||| || |||||| | ||||| || || | |||||||||||| | |  |||||| ||||||||| |||||||||||||| |||| ||||||||    
T  30430467 caaatttgcttctcgagcttcagacaaacttccaacattttctagacatgtaatgcttagttttcctcctagctttagatcatgtaattctgccaa 30430562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 30482876 - 30483007
Alignment:
Q  84 tccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcag 183  Q
    ||||||||| |||||||||  | ||||||||||||||||||||||| ||| ||  | | |||||||| |||| |||||| | ||  ||||  ||   |||    
T  30482876 tccatgacaagcataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcagataacctgccaacattgtttaatccttggatatgcag 30482975  T
Q  184 ttttccttctagctttagatcacgtaactctg 215  Q
    ||||||  | || |||||||||||||||||||    
T  30482976 ttttccaccgaggtttagatcacgtaactctg 30483007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 30714053 - 30713922
Alignment:
Q  84 tccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcag 183  Q
    ||||||||| | |||||||  | ||||||||||||||||||||||| ||| ||  | | ||| |||| |||| |||||| | ||  ||||  || |||||    
T  30714053 tccatgacaagtataattcatgaaggtcttttttacccatcaaattagccgcttcagcttcaaataaactgccaacattgtttaatcctttgatactcag 30713954  T
Q  184 ttttccttctagctttagatcacgtaactctg 215  Q
    ||||||  | || |||||||||||||||||||    
T  30713953 ttttccaccgaggtttagatcacgtaactctg 30713922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 17982400 - 17982485
Alignment:
Q  85 ccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggc 170  Q
    ||||||||||||||||||   ||||||||||||||| || ||||| || |||  ||| |||||||| || || ||||||| |||||    
T  17982400 ccatgacaggcataattcattgaggtcttttttacctataaaatttgcttcttcaacttcagataaactactgacattttgtaggc 17982485  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 30206008 - 30206045
Alignment:
Q  95 cataattctcggaggtcttttttacccatcaaattggc 132  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  30206008 cataattcctggaggtcttttttacccatcaaattggc 30206045  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 30205658 - 30205602
Alignment:
Q  216 ccaaactttgaacggttattgaaaatggaaaggggggagatgttccctcgtctttct 272  Q
    |||||||| ||| ||||||||||| ||||||| || |||||||| ||| ||||||||    
T  30205658 ccaaacttagaagggttattgaaagtggaaagaggtgagatgtttccttgtctttct 30205602  T

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Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 26706817 - 26706947
Alignment:
Q  85 ccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcagt 184  Q
    |||||||| |||||||| |  ||||| |||||| |||||||||||||| ||| || | |||||||| |||| ||||| || || |||||| || ||||||    
T  26706817 ccatgacaagcataatttttcgaggttttttttccccatcaaattggcttcttgagcttcagataaactgccaacatcttttaagccttcgatactcagt 26706916  T
Q  185 tttccttctagctttagatcacgtaactctg 215  Q
    |||||  | || |||||||||||||||||||    
T  26706917 tttccaccgaggtttagatcacgtaactctg 26706947  T

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Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 7098896 - 7099028
Alignment:
Q  84 tccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataagctgctaacattttctaggccttcaatgctcag 183  Q
    ||||||||| |||||||||   |||||||||||||||||| |||||||| |||  | | |||||||| || | |||||||| || |||||  ||   |||    
T  7098896 tccatgacaagcataattcatcgaggtcttttttacccattaaattggcttctttagcttcagataaactaccaacattttgtaagcctttgatctccag 7098995  T
Q  184 ttttccttctagctttagatcacgtaactctgc 216  Q
     |||||| |||  ||||||||||||||||||||    
T  7098996 ctttcctcctaaatttagatcacgtaactctgc 7099028  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 7582349 - 7582284
Alignment:
Q  85 ccatgacaggcataattctcggaggtcttttttacccatcaaattggcctctcgaacatcagataa 150  Q
    |||||||| |||||||||   ||||||||||||||||||||| ||||| ||| || | ||||||||    
T  7582349 ccatgacaagcataattcatcgaggtcttttttacccatcaagttggcttcttgagcttcagataa 7582284  T

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