View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21203_high_4 (Length: 288)
Name: NF21203_high_4
Description: NF21203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21203_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 32 - 279
Target Start/End: Original strand, 48527450 - 48527697
Alignment:
| Q |
32 |
ggtacaatttcaaaatctatcgatccatataatcaacaatttgtgagatcaaatggttaacatatcttctcaatgacctcaaatttactttcatcaaacc |
131 |
Q |
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| T |
48527450 |
ggtacaatttcaaaatctatcgatccatataatcaacaatttgtgagatcaaatggttaacatatcttctcaatgacctcaaatttactttcatcaaacc |
48527549 |
T |
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| Q |
132 |
agccatgttatactgtgacaatcaatctgccgcaagacatattgctgccaattcatccttcctggagagaaccaaacacatagagctcgactgtcatatt |
231 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48527550 |
agccatgttatactgtgacaatcaatccgccgcaagacatattgctgccaattcatccttcctggagagaaccaaacacatagagctcgactgtcatatt |
48527649 |
T |
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| Q |
232 |
gttcgcgtaaagcttcaactaaaactatttcatattcttcatattctt |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48527650 |
gttcgcgtaaagcttcaactaaaactatttcatattcttcatattctt |
48527697 |
T |
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