View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21203_low_13 (Length: 255)
Name: NF21203_low_13
Description: NF21203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21203_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 30980738 - 30980505
Alignment:
| Q |
1 |
ttagcaagaatagtcatcaattttggtcgataatccaactttttctacaaatattgtcactaattttaaatagtaacaaaaggaagacaaatataataat |
100 |
Q |
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| T |
30980738 |
ttagcaagaattgtcatcaattttggtcgataatccaactttttctacaaatattgtcactaattttaaatagtaacaaaaggaagaaaaatataataat |
30980639 |
T |
|
| Q |
101 |
atagttgttataaggcattaaaataataaaaattactaagttagaagtgcaaacatgtgcattaaacattagagaataataatatattaaaacttatata |
200 |
Q |
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|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30980638 |
atagttgttataaggccttaaaataataagaattactaagttagaagtgcaaacatgtgcattaaacattagagaataataatatattaaaacttatata |
30980539 |
T |
|
| Q |
201 |
tgaaagtgaagattggataatgaatactaacata |
234 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
30980538 |
tgaaagtgaagattggataatgaatactaacata |
30980505 |
T |
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