View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21203_low_18 (Length: 220)
Name: NF21203_low_18
Description: NF21203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21203_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 2097098 - 2097256
Alignment:
| Q |
47 |
aaaccaagacccctggagaaattaaatcatttcattgcagaaattccaaatggtccacacaacaacgtgccaaact-aaagccagaccaaaccttggttt |
145 |
Q |
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| T |
2097098 |
aaaccaagacccctggagaaattaaatcatttcattgcagaaattccaaatggttcacacaacaacgtgccaaactaaaagccagaccaaactttggttt |
2097197 |
T |
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| Q |
146 |
ttcttagacctaaaactcgtnnnnnnnncctcaaaaactccttcagataaagagcctttg |
205 |
Q |
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||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
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| T |
2097198 |
ttcttagacctaagactcgtaaaaaaaa-ctcaaaaactccttcagataaagagcctttg |
2097256 |
T |
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