View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21203_low_3 (Length: 565)

Name: NF21203_low_3
Description: NF21203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21203_low_3
NF21203_low_3
[»] chr8 (42 HSPs)
chr8 (17-269)||(7768252-7768504)
chr8 (273-402)||(34639277-34639406)
chr8 (270-479)||(4718643-4718852)
chr8 (270-485)||(34237643-34237858)
chr8 (270-485)||(39349254-39349469)
chr8 (271-485)||(19471608-19471823)
chr8 (271-485)||(19542532-19542747)
chr8 (271-485)||(19589949-19590164)
chr8 (278-402)||(41070767-41070892)
chr8 (270-479)||(3734617-3734826)
chr8 (270-479)||(20305906-20306115)
chr8 (270-479)||(21092539-21092748)
chr8 (268-314)||(18532103-18532149)
chr8 (269-314)||(2618183-2618228)
chr8 (271-479)||(42328004-42328211)
chr8 (273-380)||(27746426-27746535)
chr8 (274-406)||(22200626-22200758)
chr8 (270-472)||(28193472-28193674)
chr8 (270-314)||(42643277-42643321)
chr8 (269-314)||(7558102-7558147)
chr8 (273-342)||(8387575-8387644)
chr8 (270-314)||(26169007-26169051)
chr8 (368-479)||(13749152-13749263)
chr8 (273-485)||(15259394-15259606)
chr8 (268-319)||(28088282-28088333)
chr8 (273-314)||(8042655-8042696)
chr8 (270-314)||(32879277-32879321)
chr8 (275-314)||(264558-264597)
chr8 (275-314)||(651324-651363)
chr8 (275-314)||(837059-837098)
chr8 (382-485)||(33746993-33747095)
chr8 (272-342)||(15974906-15974975)
chr8 (282-319)||(21239359-21239396)
chr8 (280-338)||(22268940-22269000)
chr8 (295-347)||(34628668-34628721)
chr8 (273-314)||(34694735-34694776)
chr8 (270-314)||(775940-775984)
chr8 (270-314)||(781594-781638)
chr8 (280-360)||(18540307-18540390)
chr8 (273-313)||(21667551-21667591)
chr8 (270-314)||(24018380-24018424)
chr8 (296-347)||(27871695-27871747)
[»] chr3 (45 HSPs)
chr3 (275-553)||(33417742-33418020)
chr3 (269-455)||(4252414-4252600)
chr3 (270-484)||(40133438-40133652)
chr3 (270-484)||(40940819-40941033)
chr3 (270-485)||(30807141-30807356)
chr3 (269-479)||(30257617-30257827)
chr3 (270-479)||(8456144-8456353)
chr3 (270-479)||(35492905-35493114)
chr3 (270-485)||(25289703-25289917)
chr3 (269-314)||(45529913-45529958)
chr3 (269-479)||(48977381-48977591)
chr3 (270-314)||(34492734-34492778)
chr3 (270-314)||(46576342-46576386)
chr3 (270-487)||(49258248-49258465)
chr3 (272-380)||(53424267-53424377)
chr3 (269-314)||(50582985-50583030)
chr3 (270-363)||(55371395-55371488)
chr3 (270-314)||(21362937-21362981)
chr3 (270-314)||(31537997-31538041)
chr3 (270-314)||(45272575-45272619)
chr3 (275-314)||(25379760-25379799)
chr3 (271-314)||(52455808-52455851)
chr3 (269-485)||(18176875-18177091)
chr3 (270-363)||(7485635-7485728)
chr3 (274-468)||(26158816-26159003)
chr3 (274-314)||(4462631-4462671)
chr3 (270-314)||(9842915-9842959)
chr3 (270-479)||(32151419-32151627)
chr3 (276-342)||(50195410-50195476)
chr3 (273-314)||(25344216-25344257)
chr3 (277-314)||(26174114-26174151)
chr3 (270-314)||(7470374-7470418)
chr3 (270-314)||(15566658-15566701)
chr3 (280-360)||(30311315-30311398)
chr3 (270-314)||(55287797-55287841)
chr3 (275-314)||(11390601-11390640)
chr3 (283-314)||(26108299-26108330)
chr3 (275-314)||(52821794-52821833)
chr3 (20-74)||(7215215-7215269)
chr3 (271-313)||(16140292-16140334)
chr3 (269-380)||(51532782-51532895)
chr3 (274-339)||(36660768-36660833)
chr3 (274-342)||(27887426-27887494)
chr3 (270-314)||(29915428-29915472)
chr3 (270-314)||(29964581-29964625)
[»] chr7 (51 HSPs)
chr7 (271-485)||(21574090-21574305)
chr7 (271-477)||(23330735-23330941)
chr7 (270-479)||(28646967-28647176)
chr7 (268-479)||(40542904-40543115)
chr7 (270-479)||(2751269-2751478)
chr7 (270-475)||(21217831-21218036)
chr7 (274-479)||(22119890-22120095)
chr7 (270-485)||(11997847-11998062)
chr7 (270-485)||(17196938-17197153)
chr7 (269-314)||(2344296-2344341)
chr7 (265-314)||(7176021-7176070)
chr7 (270-314)||(7275275-7275319)
chr7 (270-314)||(18044105-18044149)
chr7 (270-314)||(23854394-23854438)
chr7 (271-314)||(2103054-2103097)
chr7 (274-401)||(22696322-22696449)
chr7 (269-314)||(31197588-31197633)
chr7 (269-314)||(31713054-31713099)
chr7 (270-314)||(10091186-10091230)
chr7 (273-317)||(12211691-12211735)
chr7 (274-314)||(13332582-13332622)
chr7 (270-314)||(17212051-17212095)
chr7 (270-314)||(21370595-21370639)
chr7 (270-314)||(25333417-25333461)
chr7 (270-314)||(27009357-27009401)
chr7 (270-314)||(27312150-27312194)
chr7 (271-314)||(7799991-7800034)
chr7 (292-402)||(35476362-35476472)
chr7 (273-314)||(28089817-28089858)
chr7 (327-485)||(29861725-29861883)
chr7 (274-342)||(1469114-1469182)
chr7 (270-314)||(32849589-32849633)
chr7 (270-314)||(42913672-42913716)
chr7 (271-314)||(19421230-19421273)
chr7 (273-484)||(21835152-21835363)
chr7 (273-314)||(8435854-8435895)
chr7 (274-314)||(577681-577721)
chr7 (274-317)||(3951146-3951190)
chr7 (274-314)||(23012667-23012707)
chr7 (274-314)||(28003838-28003878)
chr7 (270-314)||(39145811-39145855)
chr7 (322-423)||(1766194-1766294)
chr7 (270-309)||(43785463-43785502)
chr7 (281-314)||(28950877-28950910)
chr7 (270-362)||(7262215-7262307)
chr7 (286-314)||(22299863-22299891)
chr7 (270-314)||(22638290-22638334)
chr7 (280-360)||(26459394-26459477)
chr7 (270-314)||(33137955-33137998)
chr7 (270-314)||(40332097-40332141)
chr7 (270-302)||(43617442-43617474)
[»] chr2 (34 HSPs)
chr2 (271-485)||(8192340-8192553)
chr2 (270-484)||(44946042-44946256)
chr2 (270-485)||(15037953-15038168)
chr2 (270-484)||(30466819-30467033)
chr2 (268-314)||(18976584-18976630)
chr2 (270-313)||(33827733-33827776)
chr2 (270-314)||(11941369-11941413)
chr2 (270-311)||(24195998-24196039)
chr2 (269-314)||(32845084-32845129)
chr2 (274-311)||(44976316-44976353)
chr2 (270-314)||(27269509-27269553)
chr2 (270-380)||(28194225-28194337)
chr2 (278-392)||(4618765-4618880)
chr2 (270-309)||(20297557-20297596)
chr2 (280-342)||(19605976-19606038)
chr2 (270-308)||(36390731-36390769)
chr2 (273-310)||(4567600-4567637)
chr2 (269-314)||(25293159-25293204)
chr2 (270-314)||(6714440-6714484)
chr2 (274-314)||(17324764-17324804)
chr2 (270-342)||(31536202-31536274)
chr2 (270-314)||(41313986-41314030)
chr2 (273-341)||(18708472-18708542)
chr2 (272-314)||(19054021-19054063)
chr2 (367-485)||(35171893-35172009)
chr2 (293-342)||(19525527-19525576)
chr2 (274-306)||(918866-918898)
chr2 (274-314)||(4852556-4852596)
chr2 (270-306)||(10324891-10324927)
chr2 (274-342)||(18691980-18692048)
chr2 (370-406)||(19174858-19174894)
chr2 (286-314)||(27290598-27290626)
chr2 (270-342)||(32526216-32526288)
chr2 (280-348)||(42327391-42327462)
[»] chr4 (48 HSPs)
chr4 (269-485)||(40058840-40059056)
chr4 (270-485)||(19660520-19660735)
chr4 (19-97)||(45391514-45391592)
chr4 (269-485)||(34844746-34844962)
chr4 (268-486)||(46714384-46714603)
chr4 (270-485)||(5609190-5609405)
chr4 (270-380)||(25852208-25852320)
chr4 (270-479)||(27528789-27528998)
chr4 (270-314)||(32986191-32986235)
chr4 (270-314)||(54127501-54127545)
chr4 (286-400)||(12710189-12710304)
chr4 (270-485)||(44343507-44343723)
chr4 (268-314)||(52983611-52983657)
chr4 (273-314)||(20566346-20566387)
chr4 (273-342)||(40252295-40252364)
chr4 (270-314)||(1985830-1985874)
chr4 (270-314)||(22625229-22625273)
chr4 (270-314)||(33696438-33696482)
chr4 (270-314)||(35674900-35674944)
chr4 (271-314)||(13873454-13873497)
chr4 (270-446)||(40307536-40307709)
chr4 (270-314)||(34722164-34722208)
chr4 (270-314)||(41621755-41621799)
chr4 (289-391)||(8158276-8158379)
chr4 (280-314)||(35229172-35229206)
chr4 (274-312)||(45787864-45787902)
chr4 (276-314)||(55961901-55961939)
chr4 (269-342)||(13771614-13771687)
chr4 (277-342)||(31334545-31334610)
chr4 (270-314)||(33992620-33992664)
chr4 (274-314)||(34835527-34835567)
chr4 (270-314)||(36131669-36131713)
chr4 (274-314)||(42245744-42245784)
chr4 (274-314)||(51535611-51535651)
chr4 (268-319)||(10125774-10125825)
chr4 (270-317)||(13716604-13716651)
chr4 (270-477)||(18875513-18875719)
chr4 (275-314)||(32942369-32942408)
chr4 (329-485)||(32990488-32990644)
chr4 (275-317)||(9646372-9646414)
chr4 (384-485)||(4912035-4912135)
chr4 (412-473)||(8435471-8435532)
chr4 (273-318)||(17415678-17415723)
chr4 (294-342)||(32992637-32992686)
chr4 (96-176)||(45391605-45391681)
chr4 (367-479)||(28791207-28791317)
chr4 (280-360)||(37109335-37109418)
chr4 (274-314)||(43719224-43719264)
[»] chr1 (46 HSPs)
chr1 (270-479)||(15059396-15059605)
chr1 (271-402)||(1486415-1486545)
chr1 (270-400)||(1138573-1138704)
chr1 (269-479)||(4621231-4621441)
chr1 (270-380)||(8077641-8077753)
chr1 (270-490)||(32729539-32729758)
chr1 (270-314)||(7197405-7197449)
chr1 (271-363)||(24216973-24217065)
chr1 (270-314)||(24674387-24674431)
chr1 (270-314)||(34778336-34778380)
chr1 (270-319)||(14258581-14258630)
chr1 (270-468)||(18646847-18647045)
chr1 (270-380)||(27454957-27455069)
chr1 (269-314)||(29057496-29057541)
chr1 (270-380)||(46607804-46607916)
chr1 (269-314)||(47091683-47091728)
chr1 (268-314)||(168193-168239)
chr1 (270-485)||(23734110-23734326)
chr1 (270-485)||(23741302-23741518)
chr1 (268-409)||(25237052-25237194)
chr1 (275-316)||(1095152-1095193)
chr1 (270-314)||(7766886-7766930)
chr1 (270-309)||(2537698-2537737)
chr1 (275-314)||(46113561-46113600)
chr1 (367-485)||(8254740-8254856)
chr1 (274-473)||(24122021-24122220)
chr1 (280-363)||(39714760-39714845)
chr1 (272-317)||(16899507-16899552)
chr1 (269-314)||(20487349-20487394)
chr1 (273-314)||(52135127-52135168)
chr1 (274-314)||(2272342-2272382)
chr1 (270-314)||(6776139-6776182)
chr1 (270-310)||(23232428-23232468)
chr1 (270-342)||(25496619-25496691)
chr1 (270-314)||(30677170-30677214)
chr1 (272-314)||(1818730-1818772)
chr1 (274-320)||(31162748-31162794)
chr1 (269-314)||(1378891-1378936)
chr1 (286-319)||(7578419-7578452)
chr1 (270-314)||(809216-809260)
chr1 (274-314)||(1378743-1378783)
chr1 (294-342)||(3334794-3334842)
chr1 (270-310)||(7946838-7946878)
chr1 (295-350)||(15786314-15786370)
chr1 (280-360)||(33700757-33700840)
chr1 (270-314)||(40802226-40802270)
[»] chr6 (24 HSPs)
chr6 (270-485)||(34147340-34147555)
chr6 (270-485)||(34159956-34160171)
chr6 (270-487)||(21148497-21148713)
chr6 (270-479)||(15360092-15360301)
chr6 (270-485)||(3222624-3222837)
chr6 (266-314)||(9238965-9239013)
chr6 (270-486)||(5360058-5360274)
chr6 (276-473)||(11448871-11449068)
chr6 (270-314)||(12591631-12591675)
chr6 (270-314)||(22576061-22576105)
chr6 (288-402)||(3907553-3907667)
chr6 (275-424)||(10377714-10377864)
chr6 (268-314)||(13753232-13753278)
chr6 (272-317)||(8479308-8479353)
chr6 (270-339)||(33499468-33499537)
chr6 (270-479)||(9208246-9208455)
chr6 (272-310)||(21982483-21982521)
chr6 (273-314)||(9843935-9843976)
chr6 (270-314)||(11007159-11007203)
chr6 (270-314)||(28672061-28672105)
chr6 (265-314)||(654305-654354)
chr6 (270-314)||(33718617-33718661)
chr6 (268-314)||(17081213-17081259)
chr6 (271-316)||(17420860-17420905)
[»] chr5 (46 HSPs)
chr5 (270-485)||(32059428-32059643)
chr5 (272-392)||(19145491-19145612)
chr5 (269-380)||(23270613-23270726)
chr5 (270-484)||(27498720-27498934)
chr5 (270-392)||(33025474-33025598)
chr5 (270-314)||(13108608-13108652)
chr5 (270-314)||(22392695-22392739)
chr5 (270-314)||(25586926-25586970)
chr5 (273-485)||(8484649-8484861)
chr5 (270-378)||(31288039-31288149)
chr5 (270-485)||(11926489-11926705)
chr5 (270-485)||(15641094-15641308)
chr5 (273-314)||(4603774-4603815)
chr5 (269-314)||(12317309-12317354)
chr5 (265-314)||(15931048-15931097)
chr5 (273-314)||(38631120-38631161)
chr5 (270-314)||(13038613-13038657)
chr5 (270-402)||(25343233-25343368)
chr5 (270-478)||(30485822-30486030)
chr5 (267-314)||(7085785-7085832)
chr5 (271-314)||(36954813-36954856)
chr5 (269-314)||(3715068-3715113)
chr5 (270-342)||(15485422-15485495)
chr5 (273-314)||(25750770-25750811)
chr5 (270-380)||(33709592-33709703)
chr5 (270-314)||(1827689-1827733)
chr5 (270-314)||(34049816-34049860)
chr5 (270-314)||(34310136-34310180)
chr5 (270-485)||(38684202-38684416)
chr5 (270-315)||(19230469-19230514)
chr5 (270-406)||(36895419-36895556)
chr5 (269-314)||(37397706-37397751)
chr5 (274-314)||(15971281-15971321)
chr5 (273-309)||(22253309-22253345)
chr5 (271-339)||(40330628-40330696)
chr5 (274-314)||(42006791-42006831)
chr5 (280-314)||(6014439-6014473)
chr5 (273-342)||(8780475-8780544)
chr5 (277-342)||(16074043-16074108)
chr5 (273-314)||(27487714-27487755)
chr5 (396-485)||(37972904-37972992)
chr5 (282-363)||(42193491-42193572)
chr5 (295-334)||(2331997-2332037)
chr5 (270-314)||(5067295-5067339)
chr5 (270-314)||(11465066-11465110)
chr5 (270-314)||(16616113-16616157)
[»] scaffold0576 (1 HSPs)
scaffold0576 (270-479)||(5076-5285)
[»] scaffold0070 (1 HSPs)
scaffold0070 (270-485)||(40319-40533)
[»] scaffold0199 (1 HSPs)
scaffold0199 (270-314)||(8566-8610)
[»] scaffold0160 (1 HSPs)
scaffold0160 (275-392)||(29222-29340)
[»] scaffold0026 (1 HSPs)
scaffold0026 (270-380)||(97457-97569)
[»] scaffold0623 (1 HSPs)
scaffold0623 (274-314)||(1215-1255)
[»] scaffold0459 (1 HSPs)
scaffold0459 (274-314)||(10852-10892)
[»] scaffold0366 (2 HSPs)
scaffold0366 (274-314)||(9458-9498)
scaffold0366 (274-314)||(12159-12199)
[»] scaffold0328 (1 HSPs)
scaffold0328 (270-314)||(14985-15029)
[»] scaffold0068 (1 HSPs)
scaffold0068 (270-314)||(41803-41847)
[»] scaffold0051 (1 HSPs)
scaffold0051 (271-314)||(53030-53073)
[»] scaffold0200 (1 HSPs)
scaffold0200 (270-363)||(26653-26746)
[»] scaffold0217 (1 HSPs)
scaffold0217 (270-314)||(7468-7512)
[»] scaffold0049 (1 HSPs)
scaffold0049 (270-314)||(66756-66800)
[»] scaffold0460 (1 HSPs)
scaffold0460 (269-314)||(8338-8383)
[»] scaffold0102 (1 HSPs)
scaffold0102 (327-485)||(39143-39301)
[»] scaffold0028 (1 HSPs)
scaffold0028 (269-314)||(27769-27814)
[»] scaffold0240 (1 HSPs)
scaffold0240 (270-314)||(12913-12957)
[»] scaffold0717 (1 HSPs)
scaffold0717 (281-314)||(117-150)
[»] scaffold0438 (1 HSPs)
scaffold0438 (276-309)||(5052-5085)
[»] scaffold0019 (1 HSPs)
scaffold0019 (327-485)||(161860-162018)


Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 17 - 269
Target Start/End: Complemental strand, 7768504 - 7768252
Alignment:
Q  17 acctctcccaatagatcacttaaatttgacagtgcatcatcttgattccctttttcaaactatttgaggacattttatttatatcaacactaaatattgt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7768504 acctctcccaatagatcacttaaatttgacagtgcatcatcttgattccctttttcaaactatttgaggacattttatttatatcaacactaaatattgt 7768405  T
Q  117 gcaaggtaaagagggagatcacaaatgaaagatgaagagagtttgcaatattataaatgggagcaaactagtgatatgatcaatagagttgaaacttagt 216  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  7768404 gcaaggtaaagaggaaaatcacaaatgaaagatgaagagagtttgcaatattataaatggtcgcaaactagtgatatgatcaatagagttgaaacttagt 7768305  T
Q  217 acacaagtaaccaacaaagattattgagattcatatcagaaagaagctaaagc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7768304 acacaagtaaccaacaaagattattgagattcatatcagaaagaagctaaagc 7768252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 402
Target Start/End: Complemental strand, 34639406 - 34639277
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagt 371  Q
    |||||||||||| | |||||||||||||||||||||||||||||| |   |||||||||||| | ||||| | || || |||| ||||||| || |||||    
T  34639406 ccatttggggttagtctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcgat-ccctctggtgccaatttcggtgggtaagt 34639308  T
Q  372 ccatacagaactttgctctggtttagaacgg 402  Q
    ||||||||| ||||||||||| |||||||||    
T  34639307 ccatacagagctttgctctggcttagaacgg 34639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 4718643 - 4718852
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctca-aggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  | | ||| |||||||| ||||||| | || || |||| ||||||  |||     
T  4718643 aacccatttggggttggcctagtggttggcttgggatcttggagtttg-ctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggc 4718741  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  4718742 taagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 4718839  T
Q  467 gagttttcaaaaa 479  Q
    |||||||||||||    
T  4718840 gagttttcaaaaa 4718852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 34237858 - 34237643
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  34237858 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 34237759  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| |||||  ||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  34237758 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccg 34237661  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  34237660 agttttcaaaaaaaaaaa 34237643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 39349254 - 39349469
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  39349254 aacccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 39349353  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  ||||||||| ||| | ||||| || |||| |||  |||||     
T  39349354 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggatacca 39349451  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  39349452 agttttcaaaaaaaaaaa 39349469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 485
Target Start/End: Original strand, 19471608 - 19471823
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgggga--ta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||| ||| | || || |||| |||| || ||  ||    
T  19471608 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagcta 19471707  T
Q  369 agtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    |||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||| ||  |||| |||| ||||| ||||| || |||| |||  |||||||    
T  19471708 agtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccga 19471806  T
Q  469 gttttcaaaaacaaaaa 485  Q
    ||||||||||| |||||    
T  19471807 gttttcaaaaaaaaaaa 19471823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 485
Target Start/End: Original strand, 19542532 - 19542747
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgggga--ta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||| ||| | || || |||| |||| || ||  ||    
T  19542532 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagcta 19542631  T
Q  369 agtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    |||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||| ||  |||| |||| ||||| ||||| || |||| |||  |||||||    
T  19542632 agtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccga 19542730  T
Q  469 gttttcaaaaacaaaaa 485  Q
    ||||||||||| |||||    
T  19542731 gttttcaaaaaaaaaaa 19542747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 485
Target Start/End: Complemental strand, 19590164 - 19589949
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgggga--ta 368  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||| ||| | || || |||| |||| || ||  ||    
T  19590164 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagcta 19590065  T
Q  369 agtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    |||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||| ||  |||| |||| ||||| ||||| || |||| |||  |||||||    
T  19590064 agtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccga 19589966  T
Q  469 gttttcaaaaacaaaaa 485  Q
    ||||||||||| |||||    
T  19589965 gttttcaaaaaaaaaaa 19589949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 402
Target Start/End: Original strand, 41070767 - 41070892
Alignment:
Q  278 tggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtccata 376  Q
    |||||||||||||||||||| ||||||||||||||||||| |   |||||||||||||||||||| | ||||| || | ||||||| ||  |||| ||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccctttggtgtcaatttcggtgggcaagttcata 41070866  T
Q  377 cagaactttgctctggtttagaacgg 402  Q
    || | |||| |||||| |||||||||    
T  41070867 catagctttactctggcttagaacgg 41070892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 270 - 479
Target Start/End: Complemental strand, 3734826 - 3734617
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| | || || |||| ||||||  ||| |    
T  3734826 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 3734727  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||| | ||| |||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  3734726 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccg 3734629  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  3734628 agttttcaaaaa 3734617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 20305906 - 20306115
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || |   |  |||||||||  |||||| |  | || |||| ||||||  ||| |    
T  20305906 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggct 20306005  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| | | ||| ||||| |||||||  |||| |||| ||||| ||||| ||||||| |||  ||||||    
T  20306006 aagtccatacagagc-ttgctctggctttaaacgg-gacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccg 20306103  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  20306104 agttttcaaaaa 20306115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 21092539 - 21092748
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || |   |  |||||||||  |||||| |  | || |||| ||||||  ||| |    
T  21092539 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggct 21092638  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| | | ||| ||||| |||||||  |||| |||| ||||| ||||| ||||||| |||  ||||||    
T  21092639 aagtccatacagagc-ttgctctggctttaaacgg-gacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccg 21092736  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  21092737 agttttcaaaaa 21092748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 18532103 - 18532149
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18532103 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 18532149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 2618183 - 2618228
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2618183 caacccatttggggttggcctagtggttggcttgggatcttggagt 2618228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 42328004 - 42328211
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctc--aaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || |||||   |||| ||| ||| ||| | || || |||| ||||||  |||     
T  42328004 acccatttggggttggcctagtggttggcttgggatcttggagt---ttctcctccagaggtgtcaggtttgattccctctgttgccaatttcggtgggc 42328100  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||||||||| | || ||  |||| |||| ||||| ||||| || |||| |||  |||||    
T  42328101 taagtccatacagagc-ttgctctggctttaaacggggcc-cccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggatacc 42328198  T
Q  467 gagttttcaaaaa 479  Q
    |||||||||||||    
T  42328199 gagttttcaaaaa 42328211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 27746535 - 27746426
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataag 370  Q
    |||||||||||||||||||||||||| ||||||||||||||| || |   |  ||||||||| ||||||| | ||||| |||| ||||||  ||| ||||    
T  27746535 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaag 27746436  T
Q  371 tccatacaga 380  Q
    ||||||||||    
T  27746435 tccatacaga 27746426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 406
Target Start/End: Complemental strand, 22200758 - 22200626
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg-gggataagtc 372  Q
    |||||| ||||||||| |||||||| ||||||||||||||| |  ||  ||||| |||||| ||||||| | || |  |||| |||||| |||| ||||     
T  22200758 catttgaggttggcct-gtggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccctctagtgccaatttcgagggaaaagtt 22200660  T
Q  373 catacagaactttgctctggtttagaacggagcc 406  Q
    |||||||| ||||||||||| |||||||||||||    
T  22200659 catacagagctttgctctggcttagaacggagcc 22200626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 28193472 - 28193674
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  28193472 aacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggtt 28193571  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| || |||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  28193572 aagtccatacagagc-ttgctctggctttaaacggggcc-cctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 28193669  T
Q  468 agttt 472  Q
    |||||    
T  28193670 agttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 42643321 - 42643277
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  42643321 aacccatttggggttggcctagtggttgacttgggatcttggagt 42643277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 7558147 - 7558102
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  7558147 caacccatttggggttggcctagtagttagcttgggatcttggagt 7558102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 8387644 - 8387575
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    ||||||||||||||||||||||||| |||| |||||| |||| || ||  |||| |||||||||||||||    
T  8387644 ccatttggggttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgat 8387575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 26169051 - 26169007
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  26169051 aacccatttagggttggcctagtggtttgcttgggatcttggagt 26169007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 479
Target Start/End: Original strand, 13749152 - 13749263
Alignment:
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    |||| |||||| | ||||||||||| ||||||||| ||| ||| ||||| ||| ||| ||||| |||| ||| | |||||| |||||| |||| |||||     
T  13749152 aagttcatacaaagctttgctctggcttagaacggggccccccgcaagtgggcagtggaattggtcccctcggattagtcagtccttggatcagatacca 13749251  T
Q  468 agttttcaaaaa 479  Q
    | ||||||||||    
T  13749252 aattttcaaaaa 13749263  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 485
Target Start/End: Complemental strand, 15259606 - 15259394
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataag 370  Q
    |||||||||||||| ||||||||||| ||||||||||||| | || |   |   |||||||| ||||||| | || || |||| ||||||  ||| ||||    
T  15259606 ccatttggggttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaag 15259507  T
Q  371 tccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagt 470  Q
    |||||||||| | ||||||||| ||  ||||| ||| ||| ||||| ||||||| ||||| |||| ||||| ||||| || |||| |||  || ||||||    
T  15259506 tccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagt 15259409  T
Q  471 tttcaaaaacaaaaa 485  Q
    ||  ||||| |||||    
T  15259408 ttaaaaaaaaaaaaa 15259394  T

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Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 319
Target Start/End: Original strand, 28088282 - 28088333
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagtgtgtt 319  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  28088282 gcaacccatctggggttggcttagtggttgacttgggatcttggagtttgtt 28088333  T

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Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 8042655 - 8042696
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  8042655 ccatttggggttgacctagtgcttggcttgggatcttggagt 8042696  T

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Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 32879277 - 32879321
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||    
T  32879277 aacccatttggggttggtctagtggttgacttgggatcttcgagt 32879321  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Complemental strand, 264597 - 264558
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  264597 atttggcgttggcctagtggttggcttgggatcttcgagt 264558  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 651324 - 651363
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  651324 atttggcgttggcctagtggttggcttgggatcttcgagt 651363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 837059 - 837098
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  837059 atttggcgttggcctagtggttggcttgggatcttcgagt 837098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 485
Target Start/End: Original strand, 33746993 - 33747095
Alignment:
Q  382 ctttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagttttcaaaaaca 481  Q
    ||||| ||||||||||||||||||| ||| ||||| | ||||| ||||| | |  ||| | ||||| ||||||| |||  |||||||||||||||||| |    
T  33746993 ctttgttctggtttagaacggagcc-cccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagttttcaaaaaaa 33747091  T
Q  482 aaaa 485  Q
    ||||    
T  33747092 aaaa 33747095  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 15974906 - 15974975
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||  ||||||||||||||||  |||||||||||||||| || |   ||||||||||||||||||||    
T  15974906 cccatttaaggttggcctagtggtta-cttgggatcttggagtatgctcctctcaaggtctcaagttcgat 15974975  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 21239359 - 21239396
Alignment:
Q  282 gttggcctagtggttggcttgggatcttggagtgtgtt 319  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  21239359 gttggcttagtggttggcttgcgatcttggagtgtgtt 21239396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 22269000 - 22268940
Alignment:
Q  280 gggttggcctagtggt--tggcttgggatcttggagtgtgttttcctcaaggtctcaagtt 338  Q
    |||||||||| |||||  |||||||||| ||||||||||| | | ||||||||||||||||    
T  22269000 gggttggcctggtggtgttggcttgggaccttggagtgtgctcttctcaaggtctcaagtt 22268940  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 34628668 - 34628721
Alignment:
Q  295 ttggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactct 347  Q
    |||||||||||||| ||||||||||| ||||||| |||||| ||||||| ||||    
T  34628668 ttggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgattctct 34628721  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 34694776 - 34694735
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||| |||||||||| |||| |||||||||||    
T  34694776 ccatttggggttggtctagtggttgacttgtgatcttggagt 34694735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 775984 - 775940
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| |||||||||||| | | |||||||||||||||||||||||    
T  775984 aaccaatttggggttggtccaatggttggcttgggatcttggagt 775940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 781638 - 781594
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| |||||||||||| | | |||||||||||||||||||||||    
T  781638 aaccaatttggggttggtccaatggttggcttgggatcttggagt 781594  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 18540307 - 18540390
Alignment:
Q  280 gggttggcctagtggt--tggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactctttgatgccgattt 360  Q
    ||||||||||||||||  |||||||||| || |||||||  || |||||||||||||| ||||||| |||| || |||| ||||    
T  18540307 gggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaattt 18540390  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 313
Target Start/End: Original strand, 21667551 - 21667591
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggag 313  Q
    ||||||| |||||| |||||||||||||||| |||||||||    
T  21667551 ccatttgaggttggtctagtggttggcttggaatcttggag 21667591  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 24018380 - 24018424
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| |||||||||||  |||||||||| ||||||||||||||||    
T  24018380 aacctatttggggttgatctagtggttgacttgggatcttggagt 24018424  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 27871695 - 27871747
Alignment:
Q  296 tggcttgggatcttggagtgtgtt-ttcctcaaggtctcaagttcgatactct 347  Q
    ||||||||||||||||||| ||||  ||||||| |||||||||||||| ||||    
T  27871695 tggcttgggatcttggagtttgttcctcctcaaagtctcaagttcgattctct 27871747  T

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Target: chr3 (Bit Score: 143; Significance: 7e-75; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 275 - 553
Target Start/End: Complemental strand, 33418020 - 33417742
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcggggataagtcca 374  Q
    |||||||||||  ||||||||||| ||| ||| || |||||||||||||| |||||||||||||| || |||| |||||||||||||||||| ||||| |    
T  33418020 atttggggttgatctagtggttggtttgagattttagagtgtgttttccttaaggtctcaagttcaattctctctgatgccgatttcggggacaagtcta 33417921  T
Q  375 tacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagttttc 474  Q
    |||| |||||||||||| |||||||||||||||||||||| |  |  |||  |||| |||| ||||||||||||||| || ||||  ||||  |||||||    
T  33417920 tacaaaactttgctctgatttagaacggagcctcccacaaatgagaagtgggattggtcccctcgaactagtcaatctttaaatcggatactaagttttc 33417821  T
Q  475 aaaaacaaaaagtcttggtccccgaactcaaaatcttggctacgccacttagtgccatgtgtataaatatatggagtat 553  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  33417820 aaaaacaaaatgtcttggtctccaaactcaaaatcttggctacgccactgaatgccatgtgtataaatatatggagtat 33417742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 269 - 455
Target Start/End: Complemental strand, 4252600 - 4252414
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcggggat- 367  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |   |||||||||||||||| ||| | || || |||| ||||| | |||     
T  4252600 caacccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatc 4252501  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttg 455  Q
    ||||||||||| | |||| ||||||||||||||||  || ||||||||| | |||||  |||| |||| ||| | ||||| |||||||    
T  4252500 aagtccatacaaagctttactctggtttagaacgg-cccccccacaagtggacggtgggattggtcccctcggattagtcgatccttg 4252414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 270 - 484
Target Start/End: Complemental strand, 40133652 - 40133438
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || |   |  ||||||||| ||||||| | || || || | ||||||  ||| |    
T  40133652 aacccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggct 40133553  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||||| ||||| || |||| |||  ||||||    
T  40133552 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccg 40133455  T
Q  468 agttttcaaaaacaaaa 484  Q
    |||||||||||| ||||    
T  40133454 agttttcaaaaaaaaaa 40133438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 484
Target Start/End: Original strand, 40940819 - 40941033
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-gga-t 367  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||| ||| |    
T  40940819 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggact 40940918  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||  ||  ||||| ||| ||||||||| || |||   |||| |||| ||||| || ||||| ||||||||| ||||||    
T  40940919 aagtccatacagagc-ttgctctgactttaaacggggcc-cccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaatcagataccg 40941016  T
Q  468 agttttcaaaaacaaaa 484  Q
    |||||||||||| ||||    
T  40941017 agttttcaaaaaaaaaa 40941033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 30807356 - 30807141
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  30807356 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 30807257  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| ||||||   |||| |||| ||| | ||||| || |||| |||  ||||||    
T  30807256 aagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcggtaggattggtccc-tcggattagtcgattcttggatcggataccg 30807159  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  30807158 agttttcaaaaaaaaaaa 30807141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 479
Target Start/End: Original strand, 30257617 - 30257827
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| | ||||| |||| ||||||  ||      
T  30257617 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggac 30257716  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  || || ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  30257717 taagtccatacagagc-ttgctctggctttaaatggggcc-cccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggatacc 30257814  T
Q  467 gagttttcaaaaa 479  Q
    || ||||||||||    
T  30257815 gaattttcaaaaa 30257827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 270 - 479
Target Start/End: Complemental strand, 8456353 - 8456144
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  8456353 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 8456254  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| ||| |||  |||| |||| ||| | ||||| || ||||||||  ||||||    
T  8456253 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccg 8456156  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  8456155 agttttcaaaaa 8456144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 35492905 - 35493114
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  35492905 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 35493004  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| ||  |||||||    
T  35493005 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccg 35493102  T
Q  468 agttttcaaaaa 479  Q
    |||||| |||||    
T  35493103 agttttaaaaaa 35493114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 25289917 - 25289703
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || |  |||| ||||||  ||| |    
T  25289917 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggct 25289818  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||||| ||||| || |||| |||  ||||||    
T  25289817 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtccc-tcgaattagtcgattcttggatcggataccg 25289721  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  25289720 agttttcaaaaaaaaaaa 25289703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 45529958 - 45529913
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45529958 caacccatttggggttggcctagtggttggcttgggatcttggagt 45529913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 269 - 479
Target Start/End: Original strand, 48977381 - 48977591
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || |   |  ||||||||| ||||||| |  | || |||| ||||||  |||     
T  48977381 caacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggt 48977480  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||  ||||| |||||||  |||| |||| ||| | |||||  |||||| |||  |||||    
T  48977481 taagtccatacagagc-ttgctctggctttaaacggggcc-cctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggatacc 48977578  T
Q  467 gagttttcaaaaa 479  Q
    |||||||||||||    
T  48977579 gagttttcaaaaa 48977591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 34492778 - 34492734
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34492778 aacccatttggggttggcctagtggttggcttgggatcttggagt 34492734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 46576342 - 46576386
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  46576342 aacccatttggggttggcctagtggttggcttgggatcttggagt 46576386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 487
Target Start/End: Complemental strand, 49258465 - 49258248
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| || |   |   |||||||| ||||||| | || |  |||| ||||||  ||| |    
T  49258465 aacccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggct 49258366  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||||||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  49258365 aagtccatacagagc-ttgctctggctttaaacggggcc-cccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 49258268  T
Q  468 agttttcaaaaacaaaaagt 487  Q
    |||||| ||||| |||||||    
T  49258267 agttttaaaaaaaaaaaagt 49258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 272 - 380
Target Start/End: Complemental strand, 53424377 - 53424267
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataa 369  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | ||||| |||| ||||||  ||| |||    
T  53424377 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaa 53424278  T
Q  370 gtccatacaga 380  Q
    |||||||||||    
T  53424277 gtccatacaga 53424267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 50582985 - 50583030
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  50582985 caacccatttggggttggcctagtggttggtttgggatcttggagt 50583030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 55371488 - 55371395
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg 363  Q
    |||| ||||| |||||||||||||||||||||| ||| ||||||| || ||  |||||||||||| ||||||| | ||||| |||| |||||||    
T  55371488 aacctatttgaggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccctttggtgccaatttcgg 55371395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 21362937 - 21362981
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  21362937 aacccatttggggttggcctagtggttgacttgggatcttggagt 21362981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 31538041 - 31537997
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  31538041 aacccatttggggttggcctagtggttggcttaggatcttggagt 31537997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 45272619 - 45272575
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  45272619 aacccatttggggttggcctagtcgttggcttgggatcttggagt 45272575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 25379760 - 25379799
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagt 25379799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 52455851 - 52455808
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  52455851 acccatttggggttggcctagtggttggctagggatcttggagt 52455808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 269 - 485
Target Start/End: Complemental strand, 18177091 - 18176875
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-gga- 366  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| || | | |   |||| ||| ||||||| | || || |||| ||||||| |||     
T  18177091 caacccatttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcggtggac 18176992  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||     
T  18176991 taagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggataca 18176894  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||| ||||| |||||    
T  18176893 gagttttaaaaaaaaaaaa 18176875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 7485728 - 7485635
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg 363  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| || |   |  ||||||||| ||||||| | || ||||||| |||||||    
T  7485728 aacccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcgg 7485635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 468
Target Start/End: Original strand, 26158816 - 26159003
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtc 372  Q
    |||||||||||||||||   ||||||||| |||||||||||||| |   |||||||||||| |||  || | ||||| |||| ||||||| || ||||||    
T  26158816 catttggggttggcctatgtgttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtgggtaagtc 26158915  T
Q  373 catacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    ||||||       ||||||| ||||||||||||| ||| ||||| |||||||  ||||||||| ||| | |||||  |||||| |||  |||||||    
T  26158916 cataca-------gctctggcttagaacggagcc-cccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 4462631 - 4462671
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  4462631 catttggggttggcctagtggttggcttgagatcttggagt 4462671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 9842915 - 9842959
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  9842915 aacccatttggggttggtctagtggttggtttgggatcttggagt 9842959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 32151419 - 32151627
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| || |   |  ||||| |||| |||||| |||| |  |||| ||||||  ||| |    
T  32151419 aacccatttggg-ttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggct 32151517  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    |||  |||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||| |||| |||| ||||| ||||| || |||| |||  ||||||    
T  32151518 aagctcatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccg 32151615  T
Q  468 agttttcaaaaa 479  Q
    |||||| |||||    
T  32151616 agtttttaaaaa 32151627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 50195476 - 50195410
Alignment:
Q  276 tttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    ||||||||| || ||||||||| |||||||||||||||| || ||  |||||| |||||||||||||    
T  50195476 tttggggttagcatagtggttgtcttgggatcttggagtttgcttctctcaagatctcaagttcgat 50195410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 25344257 - 25344216
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  25344257 ccatttggggttggcctagtggttgacttgggatcttcgagt 25344216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 26174114 - 26174151
Alignment:
Q  277 ttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| |||||||||||||||||||||||||||||||||    
T  26174114 ttggagttggcctagtggttggcttgggatcttggagt 26174151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 7470418 - 7470374
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||    
T  7470418 aacccatttggggtttgcctagtggttgacttgagatcttggagt 7470374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 15566701 - 15566658
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| |||||||||||||||||||| |||||||||||    
T  15566701 aacccatttggg-ttggcctagtggttggcttgagatcttggagt 15566658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 30311315 - 30311398
Alignment:
Q  280 gggttggcctagtggtt--ggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactctttgatgccgattt 360  Q
    ||||||||||||||||   |||||||||||| |||||||| |  |||||||||||||| ||||||| ||||||| |||| ||||    
T  30311315 gggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaattt 30311398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 55287797 - 55287841
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||    
T  55287797 aacccatttggggttggcatagtggttggcttggaatcttagagt 55287841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 11390601 - 11390640
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  11390601 atttggggttggcctagtggttggtttgagatcttggagt 11390640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 314
Target Start/End: Original strand, 26108299 - 26108330
Alignment:
Q  283 ttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagt 26108330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Complemental strand, 52821833 - 52821794
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagt 52821794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 7215215 - 7215269
Alignment:
Q  20 tctcccaatagatcacttaaatttgacagtgcatcatcttgattccctttttcaa 74  Q
    |||||||| |||||||||| || |||||||||||||||||| ||| |||| ||||    
T  7215215 tctcccaagagatcacttatatctgacagtgcatcatcttgcttctctttctcaa 7215269  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 16140292 - 16140334
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggag 313  Q
    ||||||||||||||||||||||| || | ||||||||||||||    
T  16140292 acccatttggggttggcctagtgattagtttgggatcttggag 16140334  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 380
Target Start/End: Original strand, 51532782 - 51532895
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||| |||| | ||||| ||| ||| ||||||| || ||  |  ||||||||| ||||||| |||| | ||||| ||||||  |||     
T  51532782 caacccatttggggttgacctattagttggtttgagattttggagtttgcttctccaaaggtctcatgttcgattctctctaatgccaatttcggtgggc 51532881  T
Q  367 taagtccatacaga 380  Q
    ||||||||||||||    
T  51532882 taagtccatacaga 51532895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 36660768 - 36660833
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttc 339  Q
    |||||||||||| |||||||||||| || |||||||||||| || |   |||||||||||| ||||    
T  36660768 catttggggttgacctagtggttggtttaggatcttggagtttgctcctctcaaggtctcaggttc 36660833  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 27887426 - 27887494
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    ||||||||||||  ||||||||||||||| ||| |||||||||| ||  ||||| |||| | |||||||    
T  27887426 catttggggttgatctagtggttggcttgagatattggagtgtgcttctctcaatgtcttaggttcgat 27887494  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 29915472 - 29915428
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  29915472 aacccatttagggttgacctaatggttgacttgggatcttggagt 29915428  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 29964625 - 29964581
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  29964625 aacccatttagggttgacctaatggttgacttgggatcttggagt 29964581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 271 - 485
Target Start/End: Complemental strand, 21574305 - 21574090
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactc-tttgatgccgatttcgg-ggata 368  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |   ||||||||| || ||||||| | | |||| |||| | ||||| ||  |    
T  21574305 acccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggca 21574206  T
Q  369 agtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    |||||||||||| |||||| | || ||||||||| ||| |||||||||||||||||| |||| |||| ||| | |||||  |||||| |||  |||||||    
T  21574205 agtccatacagagctttgcccaggcttagaacggggcc-cccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccga 21574107  T
Q  469 gttttcaaaaacaaaaa 485  Q
    ||||||||||| |||||    
T  21574106 gttttcaaaaaaaaaaa 21574090  T

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Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 271 - 477
Target Start/End: Complemental strand, 23330941 - 23330735
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataa 369  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||| |   |||||||||||| ||||||  | ||  | |||| ||||||| ||  ||    
T  23330941 acccatttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggcaa 23330842  T
Q  370 gtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgag 469  Q
    ||||||||||| ||||||||||| ||| |||||  ||| || ||||| |||||| | |||| |||| || || ||||||||||||| |||  ||||||||    
T  23330841 gtccatacagagctttgctctggcttaaaacgggacct-ccgcaagtgggcggtaagattggtcccctcaaattagtcaatccttggatcggataccgag 23330743  T
Q  470 ttttcaaa 477  Q
    ||||||||    
T  23330742 ttttcaaa 23330735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 28646967 - 28647176
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggata 368  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||| ||  |||||||||||| ||||||| | || || |||| ||||||| ||  |    
T  28646967 aacctatttggggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggca 28647066  T
Q  369 agtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    |||| |||||||  |||||||||| ||| ||||| ||| ||||||||| |||||||  |||| | || ||||| |||||  |||||| |||  ||| |||    
T  28647067 agtcaatacagagttttgctctggcttataacggggcc-cccacaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcga 28647165  T
Q  469 gttttcaaaaa 479  Q
    ||||| |||||    
T  28647166 gtttttaaaaa 28647176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 479
Target Start/End: Complemental strand, 40543115 - 40542904
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggg 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  |||    
T  40543115 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggg 40543016  T
Q  366 ataagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatac 465  Q
     |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||    
T  40543015 ctaagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 40542918  T
Q  466 cgagttttcaaaaa 479  Q
    ||||||||||||||    
T  40542917 cgagttttcaaaaa 40542904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 2751269 - 2751478
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| | || || |||| ||||||  ||| |    
T  2751269 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 2751368  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||| | |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  2751369 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 2751466  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  2751467 agttttcaaaaa 2751478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 475
Target Start/End: Complemental strand, 21218036 - 21217831
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || ||||||| ||||||  ||| |    
T  21218036 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggct 21217937  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||| | ||  ||||| ||| ||||||||| |||||||  ||||||||| ||| | ||||  || |||| |||  ||||||    
T  21217936 aagtccatacagagc-ttgctctagctttaaacgg-gccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccg 21217839  T
Q  468 agttttca 475  Q
    ||||||||    
T  21217838 agttttca 21217831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 274 - 479
Target Start/End: Original strand, 22119890 - 22120095
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataagt 371  Q
    ||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 22119989  T
Q  372 ccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagtt 471  Q
    ||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||||||    
T  22119990 ccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtt 22120087  T
Q  472 ttcaaaaa 479  Q
    ||||||||    
T  22120088 ttcaaaaa 22120095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 11997847 - 11998062
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg--ggat 367  Q
    |||||||||| |||||| ||||||||||||||||||||||||||| || |   ||  |||||||| ||||||| | || || |||| |||||||  || |    
T  11997847 aacccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggct 11997946  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||| | | ||||||||| ||  ||| | ||| ||| ||||| |||||||  |||| |||| ||||| ||||| || |||| |||  ||||||    
T  11997947 aagtccatacatagc-ttgctctggctttaaactgggcc-cccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccg 11998044  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  11998045 agttttcaaaaaaaaaaa 11998062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 17197153 - 17196938
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgggga--t 367  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||| || |   |   |||||||||||||||| | || || |||| ||||||| ||  |    
T  17197153 aacccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcggtgagct 17197054  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| ||| ||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||||| ||||| || |||| |||  ||||||    
T  17197053 aagtccatacagagctt-gctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccg 17196956  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||| ||||| |||||    
T  17196955 agttttaaaaaaaaaaaa 17196938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 2344296 - 2344341
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2344296 caacccatttggggttggcctagtggttggcttgggatcttggagt 2344341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 7176070 - 7176021
Alignment:
Q  265 aaagcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7176070 aaaggaacccatttggggttggcctagtggttggcttgggatcttggagt 7176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 7275275 - 7275319
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7275275 aacccatttggggttggcctagtggttggcttgggatcttggagt 7275319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 18044105 - 18044149
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18044105 aacccatttggggttggcctagtggttggcttgggatcttggagt 18044149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 23854394 - 23854438
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23854394 aacccatttggggttggcctagtggttggcttgggatcttggagt 23854438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 2103054 - 2103097
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2103054 acccatttggggttggcctagtggttggcttgggatcttggagt 2103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 274 - 401
Target Start/End: Original strand, 22696322 - 22696449
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcggggataagtcc 373  Q
    |||| |||||||||||||||||||  |||||||||||||||||| |   |||||||||||| ||| ||| | || || |||| ||||||| |   | |||    
T  22696322 cattaggggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggggactcc 22696421  T
Q  374 atacagaactttgctctggtttagaacg 401  Q
    ||||||| ||||||||||| ||||||||    
T  22696422 atacagagctttgctctggcttagaacg 22696449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 31197588 - 31197633
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  31197588 caacccatttggggttggtctagtggttggcttgggatcttggagt 31197633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 31713099 - 31713054
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  31713099 caacccatttggggttggcctagtggttggtttgggatcttggagt 31713054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 10091186 - 10091230
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  10091186 aacccatttggggttggtctagtggttggcttgggatcttggagt 10091230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 12211735 - 12211691
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtg 317  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  12211735 ccatttggggttggcctagtggttggcttaggatcttggagtgtg 12211691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 13332622 - 13332582
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13332622 catttggggttggcctagtggttggcttgggatcttggagt 13332582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 17212051 - 17212095
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  17212051 aacccatttggggttggcttagtggttggcttgggatcttggagt 17212095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 21370595 - 21370639
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  21370595 aacccatttggggttggcctagtggttggtttgggatcttggagt 21370639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 25333417 - 25333461
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  25333417 aacccatttggggttggcttagtggttggcttgggatcttggagt 25333461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 27009357 - 27009401
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  27009357 aacccatttggggttggcctagtggttggcttcggatcttggagt 27009401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 27312150 - 27312194
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  27312150 aacctatttggggttggcctagtggttggcttgggatcttggagt 27312194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 7800034 - 7799991
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  7800034 acccatttggggttgacctagtggttggcttgggatcttggagt 7799991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 402
Target Start/End: Original strand, 35476362 - 35476472
Alignment:
Q  292 tggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtccatacagaactttgctct 390  Q
    |||||| ||| ||||||| ||||||||||| ||||||| || | ||||||| ||||||| |||| |||| || || ||||| |||||||| |||||||||    
T  35476362 tggttgactttggatctttgagtgtgtttttctcaaggcct-aggttcgattctctttggtgccaattttggtgggtaagttcatacagagctttgctct 35476460  T
Q  391 ggtttagaacgg 402  Q
    || |||||||||    
T  35476461 ggcttagaacgg 35476472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 28089817 - 28089858
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  28089817 ccatttggggttggcctagtggttggcttgagatcttggagt 28089858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 29861725 - 29861883
Alignment:
Q  327 aggtctcaagttcgatactctttgatgccgatttcgg--ggataagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtg 424  Q
    |||||||| ||||||| | || || |||| |||||||  || |||||||||||||||||| ||||||| ||  ||||| ||| ||| ||||| |||||||    
T  29861725 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacggggcc-cccgcaagtgggcggtg 29861822  T
Q  425 aaattgatcccttcgaactagtcaatccttgaatcaaataccgagttttcaaaaacaaaaa 485  Q
      ||||||||| ||||| ||||| || |||  |||  |||||||||||||||||| |||||    
T  29861823 ggattgatcccctcgaattagtcgattcttagatcggataccgagttttcaaaaataaaaa 29861883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 1469114 - 1469182
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||||||||||||||||||| ||||  |||||||||| ||||   |||||||||||| |||||||    
T  1469114 catttggggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgat 1469182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 32849589 - 32849633
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  32849589 aacccatttggggttagcctagtggttgacttgggatcttggagt 32849633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 42913716 - 42913672
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  42913716 aacccattttcggttggcctagtggttggcttgggatcttggagt 42913672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 19421230 - 19421273
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  19421230 acccatttggggttgacttagtggttggcttgggatcttggagt 19421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 484
Target Start/End: Original strand, 21835152 - 21835363
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataag 370  Q
    |||||| |||||| |||||||||||||||||||||||||||| || |   |   || ||||| ||||||| | || || |||| ||||||  ||| ||||    
T  21835152 ccatttagggttgacctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaag 21835251  T
Q  371 tccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagt 470  Q
    |||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||| |||||    
T  21835252 tccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagt 21835349  T
Q  471 tttcaaaaacaaaa 484  Q
    ||||||||| ||||    
T  21835350 tttcaaaaaaaaaa 21835363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 8435895 - 8435854
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  8435895 ccatttggggttggtctagtggttgacttgggatcttggagt 8435854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 577681 - 577721
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  577681 catttggggttggcctagtggtttgcttgggatcttagagt 577721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 3951190 - 3951146
Alignment:
Q  274 catttggggttggcctagtggttggctt-gggatcttggagtgtg 317  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  3951190 catttggggttggtctagtggttggcttggggatcttggagtgtg 3951146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 23012707 - 23012667
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  23012707 catttagggttggcccagtggttggcttgggatcttggagt 23012667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 28003838 - 28003878
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  28003838 catttggggttgatctagtggttggcttgggatcttggagt 28003878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 39145855 - 39145811
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||    
T  39145855 aacccatttgaggttgacctagtggttgacttgggatcttggagt 39145811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 1766294 - 1766194
Alignment:
Q  322 cctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggc 420  Q
    ||||||| ||||||||||||| | ||||  || | ||||||| || |||||||||||||||||||||  ||| ||||||||| ||  ||||||||| |||    
T  1766294 cctcaagttctcaagttcgattcccttttgtgtcaatttcggtgggtaagtccatacagaactttgccttggcttagaacggggc--cccacaagtgggc 1766197  T
Q  421 ggt 423  Q
    |||    
T  1766196 ggt 1766194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 43785502 - 43785463
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatctt 309  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  43785502 aacccatttggggttgacctaatggttggcttgggatctt 43785463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 28950877 - 28950910
Alignment:
Q  281 ggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||| |||||||||    
T  28950877 ggttggcctagtggttggcttggggtcttggagt 28950910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 362
Target Start/End: Original strand, 7262215 - 7262307
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg 362  Q
    |||| ||||| ||||| | ||||||||| |||| ||||||| |||||| |   |||||||||||||||| ||| |||  ||||||| ||||||    
T  7262215 aacctatttgaggttgacttagtggttgacttgtgatcttgtagtgtgatcctctcaaggtctcaagtttgattctccatgatgccaatttcg 7262307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 22299863 - 22299891
Alignment:
Q  286 gcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||    
T  22299863 gcctagtggttggcttgggatcttggagt 22299891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 22638290 - 22638334
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||    
T  22638290 aacccatttggggttggtctagtggttgacttgagatcttagagt 22638334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 26459477 - 26459394
Alignment:
Q  280 gggttggcctagtggt--tggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactctttgatgccgattt 360  Q
    ||||||||||||||||  |||||||||| || |||||||| |  |||||||||||||| ||||||| |||| || |||| ||||    
T  26459477 gggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 33137998 - 33137955
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||    
T  33137998 aacccatttggggttggcctagt-gttggcttgggaatttggagt 33137955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 40332097 - 40332141
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||| ||||| |||||||||||||||  ||||||||||    
T  40332097 aacccatttggagttggtctagtggttggcttgaaatcttggagt 40332141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 302
Target Start/End: Complemental strand, 43617474 - 43617442
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttg 302  Q
    ||||||||||| |||||||||||||||||||||    
T  43617474 aacccatttggagttggcctagtggttggcttg 43617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 271 - 485
Target Start/End: Complemental strand, 8192553 - 8192340
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataa 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||| ||||||| | || || |||| || |||| ||  ||    
T  8192553 acccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggcaa 8192454  T
Q  370 gtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgag 469  Q
    ||||||| ||| ||||||||||| |||||||||  |||| ||  ||| |||||||  ||||  ||| ||| | |||||  |||||| |||  ||||||||    
T  8192453 gtccatatagagctttgctctggcttagaacggcccctcgca--agtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgag 8192356  T
Q  470 ttttcaaaaacaaaaa 485  Q
    |||||||||| |||||    
T  8192355 ttttcaaaaaaaaaaa 8192340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 270 - 484
Target Start/End: Complemental strand, 44946256 - 44946042
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | ||||| |||| ||||||  ||| |    
T  44946256 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggct 44946157  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||||| ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  44946156 aagtccatacagaac-ttgctctggctttaaacgg-gccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 44946059  T
Q  468 agttttcaaaaacaaaa 484  Q
    |||||||||||| ||||    
T  44946058 agttttcaaaaaaaaaa 44946042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 15037953 - 15038168
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||||||||||||||| || ||||||||||||| || |   |  ||||||||| ||||||| | ||||| |||| ||||||  ||| |    
T  15037953 aacccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggct 15038052  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||| ||| ||  ||||||||| ||| ||||| |||||||  |||| |||| ||  | ||||| || |||| |||  ||||||    
T  15038053 aagtccatacagagc-ttgctttggctttaaacggagcc-cccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccg 15038150  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  15038151 agttttcaaaaaaaaaaa 15038168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 484
Target Start/End: Complemental strand, 30467033 - 30466819
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| ||||   ||  |||||||| ||||||| |||| || |||| ||||||  ||| |    
T  30467033 aacccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggct 30466934  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||| | ||| ||| ||||| ||| |||  |||| |||||||| | ||||| || |||| |||  ||||||    
T  30466933 aagtccatacagagc-ttgctctggctttaaaccgggcc-cccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccg 30466836  T
Q  468 agttttcaaaaacaaaa 484  Q
    |||||| ||||| ||||    
T  30466835 agttttaaaaaaaaaaa 30466819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 18976630 - 18976584
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18976630 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 18976584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 313
Target Start/End: Complemental strand, 33827776 - 33827733
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggag 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33827776 aacccatttggggttggcctagtggttggcttgggatcttggag 33827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 11941413 - 11941369
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  11941413 aacccatttggggttggtctagtggttggcttgggatcttggagt 11941369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 24195998 - 24196039
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttgg 311  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  24195998 aacccatttggggttggcctagtggttggcttgggattttgg 24196039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 32845084 - 32845129
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  32845084 caacccatttggggttggcctagtagttagcttgggatcttggagt 32845129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 44976353 - 44976316
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttgg 311  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44976353 catttggggttggcctagtggttggcttgggatcttgg 44976316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 27269553 - 27269509
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||    
T  27269553 aacccatttggggttggcatagtggttggcttgggatcttcgagt 27269509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 380
Target Start/End: Complemental strand, 28194337 - 28194225
Alignment:
Q  270 aacccatttggggttggcctagtggtt-ggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggat 367  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||| |   || ||||||| | ||||||| |||| || |||| ||||||| ||      
T  28194337 aacccatttggggttggcgtagtgatttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggc 28194238  T
Q  368 aagtccatacaga 380  Q
    |||||||||||||    
T  28194237 aagtccatacaga 28194225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 278 - 392
Target Start/End: Complemental strand, 4618880 - 4618765
Alignment:
Q  278 tggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtccata 376  Q
    |||||||||||||||||||||||||| |||||||||| || |   |||||||| ||| |||||||   |  || |||| ||||||| ||  |||||||||    
T  4618880 tggggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccata 4618781  T
Q  377 cagaactttgctctgg 392  Q
    || |||||||||||||    
T  4618780 caaaactttgctctgg 4618765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 20297557 - 20297596
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatctt 309  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  20297557 aacccatttggggttggcccagtggttggcttgggatctt 20297596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 19606038 - 19605976
Alignment:
Q  280 gggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||| ||||||||||||||||||||||||||||| | |   |||||||||||| |||||||    
T  19606038 gggttgccctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgat 19605976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 36390769 - 36390731
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatct 308  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  36390769 aacccatttggggttggcctagtggttggtttgggatct 36390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 4567637 - 4567600
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttg 310  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4567637 ccatttggggttggcctagtagttggcttgggatcttg 4567600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 25293159 - 25293204
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||    
T  25293159 caacccatttgaggttggtctagtggttgacttgggatcttggagt 25293204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 6714484 - 6714440
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||    
T  6714484 aacccatttgggattggcctaatggttggcttgagatcttggagt 6714440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 17324764 - 17324804
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  17324764 catttggggttggcctagtggttggtttggtatcttggagt 17324804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 31536202 - 31536274
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||||||| || | |||| ||||||||||||||||||||||| |||   || || ||||||||||||||    
T  31536202 aacccatttgggattagtctagcggttggcttgggatcttggagtgcgttcctcttaaagtctcaagttcgat 31536274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 41313986 - 41314030
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||| | |||||||||| |||||||||||||||    
T  41313986 aacccatttggggttgccgtagtggttggtttgggatcttggagt 41314030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 18708472 - 18708542
Alignment:
Q  273 ccatttggggttggcc--tagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcga 341  Q
    ||||||||||||| ||  |||||||||  ||||||||||||||||||||   |||||||||||| ||||||    
T  18708472 ccatttggggttgcccagtagtggttgaattgggatcttggagtgtgttcctctcaaggtctcaggttcga 18708542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 19054021 - 19054063
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| ||||||||| |||||||| |||||||||||    
T  19054021 cccatttggggtgggcctagtgattggcttgagatcttggagt 19054063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 485
Target Start/End: Original strand, 35171893 - 35172009
Alignment:
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| ||| ||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || ||||||||  |||||    
T  35171893 taagtccatacagagctt-gctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatacc 35171990  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  35171991 gagttttcaaaaaaaaaaa 35172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 19525576 - 19525527
Alignment:
Q  293 ggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||||||||||||| |||||||||  |||||| ||||| |||||||    
T  19525576 ggttggcttgggatcttgaagtgtgtttctctcaagatctcaggttcgat 19525527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 918898 - 918866
Alignment:
Q  274 catttggggttggcctagtggttggcttgggat 306  Q
    |||||||||||| ||||||||||||||||||||    
T  918898 catttggggttgacctagtggttggcttgggat 918866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 4852556 - 4852596
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| ||||||||||| ||||| ||||||||||    
T  4852556 catttggggttgacctagtggttgacttggaatcttggagt 4852596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 10324891 - 10324927
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggat 306  Q
    |||||||||||||||||| |||||||||| |||||||    
T  10324891 aacccatttggggttggcatagtggttggtttgggat 10324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 18691980 - 18692048
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    ||||||||||||||||| ||||| |||||| || |||||||||| |   |||||| ||||| |||||||    
T  18691980 catttggggttggcctaatggtttgcttggaattttggagtgtgctcatctcaagatctcaggttcgat 18692048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 406
Target Start/End: Original strand, 19174858 - 19174894
Alignment:
Q  370 gtccatacagaactttgctctggtttagaacggagcc 406  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  19174858 gtccatacagagctttgctctggcttagaacggagcc 19174894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 27290598 - 27290626
Alignment:
Q  286 gcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||    
T  27290598 gcctagtggttggcttgggatcttggagt 27290626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 32526288 - 32526216
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    ||||||||||| |||||| |||||||||  ||||||||||| ||| || |   |||||||||||| |||||||    
T  32526288 aacccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgat 32526216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 42327462 - 42327391
Alignment:
Q  280 gggttggcctagtggt--tggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactctt 348  Q
    ||||||||||||||||  |||||||||| || |||||||| |  |||||||||||||| ||||||| |||||    
T  42327462 gggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctt 42327391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 269 - 485
Target Start/End: Complemental strand, 40059056 - 40058840
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |   ||  |||||||| ||||||| |||| || |||| ||||||  |||     
T  40059056 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggc 40058957  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  40058956 taagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 40058859  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    |||||||||| || |||||    
T  40058858 gagttttcaacaaaaaaaa 40058840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 19660735 - 19660520
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || |   |   |||||||| ||| ||| |||| ||||||  ||||||  |||||    
T  19660735 aacccatttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcggtgggat 19660636  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||| | ||| ||| ||||| |||||||  ||||||||| ||| | ||||| || |||| |||  ||||||    
T  19660635 aagtccatacagagc-ttgctctggctttaaacagggcc-cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccg 19660538  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  19660537 agttttcaaaaaaaaaaa 19660520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 45391514 - 45391592
Alignment:
Q  19 ctctcccaatagatcacttaaatttgacagtgcatcatcttgattccctttttcaaactatttgaggacattttattta 97  Q
    |||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||| |||||| ||||||||    
T  45391514 ctctcccaatagatcacttaaatttgacagtgcatcatcttgcttacccttttcaaactgtttcaggacactttattta 45391592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 485
Target Start/End: Complemental strand, 34844962 - 34844746
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| || |   |   |||||||| ||||||| |||| || |||| ||||||  |||     
T  34844962 caacccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggc 34844863  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  34844862 taagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 34844765  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  34844764 gagttttcaaaaaaaaaaa 34844746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 486
Target Start/End: Original strand, 46714384 - 46714603
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcga-tactctttgatgccgatttcg--gg 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| |||||| | | ||||| |||| ||||||  ||    
T  46714384 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgg 46714483  T
Q  365 gataagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaata 464  Q
    | |||||||||||||| | |||| || | ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | |||||||| ||||||||  |||    
T  46714484 gctaagtccatacagagc-ttgcccttgctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggata 46714581  T
Q  465 ccgagttttcaaaaacaaaaag 486  Q
    ||||||||||||| | ||||||    
T  46714582 ccgagttttcaaataaaaaaag 46714603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 5609405 - 5609190
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctca-aggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |   |||  ||||||| ||||||| |||| || |||| ||||||  |||     
T  5609405 aacccatttggggttggcctagtggttggcttgggatcttggagtttg-ctcattcagtggtctcaggttcgattctctctggtgccaatttcggtgggc 5609307  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  || || ||| ||| ||||| | |||||  ||||||||| ||| | ||||| || |||| |||  |||||    
T  5609306 taagtccatacagagc-ttgctctggctttaaatggggcc-cccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggatacc 5609209  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  5609208 gagttttcaaaaaaaaaaa 5609190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 270 - 380
Target Start/End: Original strand, 25852208 - 25852320
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| | || || |||| ||||||  ||| |    
T  25852208 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 25852307  T
Q  368 aagtccatacaga 380  Q
    |||||||||||||    
T  25852308 aagtccatacaga 25852320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 479
Target Start/End: Complemental strand, 27528998 - 27528789
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  27528998 aacccatctggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 27528899  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||   |||| ||| ||| ||||| |||||||| |||| |||| ||| | ||||| || |||| |||  ||||||    
T  27528898 aagtccatacagagc-ttgctctggctttatacggggcc-cccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccg 27528801  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  27528800 agttttcaaaaa 27528789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 32986191 - 32986235
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32986191 aacccatttggggttggcctagtggttggcttgggatcttggagt 32986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 54127545 - 54127501
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  54127545 aacccatttggggttggcctagtggttggcttgggatcttggagt 54127501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 286 - 400
Target Start/End: Original strand, 12710189 - 12710304
Alignment:
Q  286 gcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtccatacagaactt 384  Q
    ||||||||||||| ||||||||||||||| || ||  || ||||||||| ||||||| | |||| ||| | ||||||| ||| ||||||||||||  |||    
T  12710189 gcctagtggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattccctttaatgtcaatttcggtggacaagtccatacagtgctt 12710288  T
Q  385 tgctctggtttagaac 400  Q
    |||||||| |||||||    
T  12710289 tgctctggcttagaac 12710304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 44343507 - 44343723
Alignment:
Q  270 aacccatttggggttggcctagtggtt-ggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg--gga 366  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||| || |  ||  |||| |||||||||||| | || || |||  |||| ||  ||     
T  44343507 aacctatttggggttgggctagtggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattttggtgggc 44343606  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| ||| ||||||  ||  ||||| || |||| ||||| |||||||  |||| |||| ||||| ||||| || ||||||||  |||||    
T  44343607 taagtccatacagagctt-gctctgactttaaacggggc-tcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggatacc 44343704  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  44343705 gagttttcaaaaaaaaaaa 44343723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 52983611 - 52983657
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  52983611 gcaacccatttggggttggcctagtggttggcttgagatcttggagt 52983657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 20566346 - 20566387
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20566346 ccatttggggttggcctagtggttggcttgggatcttggagt 20566387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 40252295 - 40252364
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||||||||| ||||| |||| ||||| ||||||||||||| ||  ||||||||||||||||||||    
T  40252295 ccatttggggttggtctagtagttgacttggaatcttggagtgtgcttctctcaaggtctcaagttcgat 40252364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 1985830 - 1985874
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  1985830 aacccatttgggattggcctagtggttggcttgggatcttggagt 1985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 22625273 - 22625229
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  22625273 aacccatttgaggttggcctagtggttggcttgggatcttggagt 22625229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 33696482 - 33696438
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  33696482 aacccatttagggttggcctagtggttggcttgggatcttggagt 33696438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 35674944 - 35674900
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  35674944 aacccatttggggttggccaagtggttggcttgggatcttggagt 35674900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 13873497 - 13873454
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  13873497 acccatttggggttggcctagtggtttgcttgggatcttggagt 13873454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 446
Target Start/End: Original strand, 40307536 - 40307709
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcggggataa 369  Q
    |||||||||||  ||| ||||||| |||| ||||||| |||||||||| |   ||||||||||||  || ||| | ||||| |||| ||||||| |  ||    
T  40307536 aacccatttggaattgacctagtgtttggtttgggattttggagtgtgctcctctcaaggtctcatatttgattc-ctttggtgccaatttcggtggcaa 40307634  T
Q  370 gtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagt 446  Q
    |||||||| ||  |||||||||||||||||||  ||  ||||| ||| | ||||| |||||||||| ||||| ||||    
T  40307635 gtccatactgatatttgctctggtttagaacgctgc--cccactagtggacggtggaattgatcccctcgaattagt 40307709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 34722164 - 34722208
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  34722164 aacctatttggggttggcttagtggttggcttgggatcttggagt 34722208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 41621799 - 41621755
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  41621799 aacccatttggggttggcctaatggttggcttgagatcttggagt 41621755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 8158276 - 8158379
Alignment:
Q  289 tagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttc-ggggataagtccatacagaactttgc 387  Q
    ||||||||| |||| ||||||||||| | ||| ||||||||||||| ||||||| | || | ||| | ||||| || ||||||| |||||| ||||||||    
T  8158276 tagtggttgacttgagatcttggagtatctttccctcaaggtctcaggttcgattcactctcatgtcaatttctggcgataagttcatacaaaactttgc 8158375  T
Q  388 tctg 391  Q
    ||||    
T  8158376 tctg 8158379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 35229172 - 35229206
Alignment:
Q  280 gggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagt 35229206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 45787902 - 45787864
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttgga 312  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  45787902 catttggggttggcctagtggttggcttggaatcttgga 45787864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 55961939 - 55961901
Alignment:
Q  276 tttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  55961939 tttgggattggcctagtggttggcttgggatcttggagt 55961901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 13771687 - 13771614
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||||||||||||| ||  ||||||||||||||||||| ||| || |   ||||||||||||| ||||||    
T  13771687 caacccatttggggttggtctgatggttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgat 13771614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 31334545 - 31334610
Alignment:
Q  277 ttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||| ||||||||||||  ||||||| |||||||||| ||  || |||||||||||||||||    
T  31334545 ttggggttcgcctagtggttgatttgggatattggagtgtgcttctcttaaggtctcaagttcgat 31334610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 33992620 - 33992664
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||    
T  33992620 aacccatttagggttgacctagtggttggtttgggatcttggagt 33992664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 34835527 - 34835567
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  34835527 catttggggttggtctagtggttggcttgggatcttagagt 34835567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 36131713 - 36131669
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||    
T  36131713 aacccatttggggttggcatagtggtttgcttgggattttggagt 36131669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 42245744 - 42245784
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  42245744 catttggggttggcctagtggttgacttgggatcttagagt 42245784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 51535611 - 51535651
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  51535611 catttagggttggcctagtggttgacttgggatcttggagt 51535651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 319
Target Start/End: Original strand, 10125774 - 10125825
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagtgtgtt 319  Q
    |||||| | |||| |||||||||||||||| |||||||||||||||| ||||    
T  10125774 gcaaccgagttggagttggcctagtggttgacttgggatcttggagtttgtt 10125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 13716651 - 13716604
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtg 317  Q
    ||||||||||  ||||||||||||||||||||| ||| ||||||||||    
T  13716651 aacccatttgttgttggcctagtggttggcttgagatattggagtgtg 13716604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 477
Target Start/End: Complemental strand, 18875719 - 18875513
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaagg-tctcaagttcgatactctttgatgccgatttcgg--gga 366  Q
    |||||||||| ||||| | |||||||||| ||||||| || |||| ||||| | |||| | ||||| ||||||| | || ||||| | |||||||  ||     
T  18875719 aacccatttgtggttgacatagtggttggtttgggattttagagtttgttt-cttcaaagatctcaggttcgattccctctgatgtcaatttcggtgggc 18875621  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| ||| ||||||| ||  ||||| ||| ||||||||| ||  |||  ||||||||| ||| | ||||||||  ||| |||| |||||    
T  18875620 taagtccatacagagctt-gctctggctttaaacgg-gcc-cccacaagtgggtagtgggattgatcccctcggattagtcaatttttggatcagatacc 18875524  T
Q  467 gagttttcaaa 477  Q
    |||||||||||    
T  18875523 gagttttcaaa 18875513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 32942369 - 32942408
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  32942369 atttggggttggtctagtggttggcttgagatcttggagt 32942408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 485
Target Start/End: Original strand, 32990488 - 32990644
Alignment:
Q  329 gtctcaagttcgatactctttgatgccgatttcgg--ggataagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaa 426  Q
    |||||| ||||||| | ||||  |||| |||||||  || |||||||||||||| ||| ||||||| ||  ||||| ||| ||| ||||| |||||||      
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcc-cccgcaagtgggcggtggg 32990585  T
Q  427 attgatcccttcgaactagtcaatccttgaatcaaataccgagttttcaaaaacaaaaa 485  Q
    |||| |||| ||| ||||||| || |||| ||| ||||| ||||||||||||| |||||    
T  32990586 attggtcccctcggactagtcgattcttggatcgaatactgagttttcaaaaaaaaaaa 32990644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 9646414 - 9646372
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagtgtg 317  Q
    |||||||||||| ||||||||||| |||||||||| |||||||    
T  9646414 atttggggttggtctagtggttggtttgggatctttgagtgtg 9646372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 4912035 - 4912135
Alignment:
Q  384 ttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagttttcaaaaacaaa 483  Q
    ||||||||| ||  ||||||||| ||| ||||| || ||||  |||||||||  |||| ||||| || |||| |||| |||||||||||||||||| |||    
T  4912035 ttgctctggctttaaacggagcc-cccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttttcaaaaaaaaa 4912133  T
Q  484 aa 485  Q
    ||    
T  4912134 aa 4912135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 8435532 - 8435471
Alignment:
Q  412 caagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagtttt 473  Q
    ||||||||||| || |||||| || |||||||||| | |||||| |||||||||||| ||||    
T  8435532 caagtaggcggcgagattgataccatcgaactagttagtccttggatcaaataccgattttt 8435471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 17415678 - 17415723
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgt 318  Q
    |||||| || |||| |||||||||| ||||||||||||||||||||    
T  17415678 ccatttaggcttggtctagtggttgacttgggatcttggagtgtgt 17415723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 32992637 - 32992686
Alignment:
Q  294 gttggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgat 342  Q
    |||||||||||| ||||||||||| |  ||||||||||||||||||||||    
T  32992637 gttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgat 32992686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 45391605 - 45391681
Alignment:
Q  96 tatatcaacactaaatattgtgcaaggtaaagagggagatcacaaatgaaagatgaagagagtttgcaatattataaatgg 176  Q
    ||||| |||||||| |||||||||||||||||| | | ||||||||||||| ||||  ||||||||||| ||||| |||||    
T  45391605 tatattaacactaa-tattgtgcaaggtaaagaagaaaatcacaaatgaaa-atga--agagtttgcaacattattaatgg 45391681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 479
Target Start/End: Original strand, 28791207 - 28791317
Alignment:
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||| ||||| ||||||||||||| ||  ||||| | || |||||||| |||||||| |||| | | |||||| |||||  ||||||||||  ||| |    
T  28791207 taagtctatacaaaactttgctctggctttaaacgg-gtct-ccacaagtgggcggtgagattggttctttcgaattagtcggtccttgaatcggatatc 28791304  T
Q  467 gagttttcaaaaa 479  Q
    |||||||||||||    
T  28791305 gagttttcaaaaa 28791317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 37109418 - 37109335
Alignment:
Q  280 gggttggcctagtggt--tggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactctttgatgccgattt 360  Q
    ||||||||||||||||  |||||||||| || |||||||| |  |||||||||||||| ||||||| |||| || |||| ||||    
T  37109418 gggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 43719264 - 43719224
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||| ||||||||||| ||| |||||||||||    
T  43719264 catttggggttggtctagtggttggtttgagatcttggagt 43719224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 270 - 479
Target Start/End: Complemental strand, 15059605 - 15059396
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |   |   |||||||| ||||||| |||| || |||| ||||||  ||| |    
T  15059605 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggct 15059506  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| | | ||| ||||| |||||||| |||| |||| ||||| ||||| || |||| |||  ||||||    
T  15059505 aagtccatacagagc-ttgctctggctttaaacggggtc-cccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccg 15059408  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  15059407 agttttcaaaaa 15059396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 271 - 402
Target Start/End: Original strand, 1486415 - 1486545
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg-gggataa 369  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||| |   |||||||||||| ||||||| | ||||| |||| ||||||  || |||    
T  1486415 acccatttggggttgacctagtggttggcttgggatcttgga--gtgctactctcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaa 1486512  T
Q  370 gtccatacagaactttgctctggtttagaacgg 402  Q
    ||||||||||| ||||||||||  |||||||||    
T  1486513 gtccatacagagctttgctctgacttagaacgg 1486545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 400
Target Start/End: Original strand, 1138573 - 1138704
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggata 368  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |   |||||||||| | ||||||  |||| |  |||| ||||||| ||| |    
T  1138573 aacccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggaca 1138672  T
Q  369 agtccatacagaactttgctctggtttagaac 400  Q
    |||||||||||| ||||||||||  |||||||    
T  1138673 agtccatacagagctttgctctgacttagaac 1138704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 479
Target Start/End: Complemental strand, 4621441 - 4621231
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  |||     
T  4621441 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggc 4621342  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| | | ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  4621341 taagtccatacagagc-ttgctctggctttaaacggggtc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 4621244  T
Q  467 gagttttcaaaaa 479  Q
    |||||||||||||    
T  4621243 gagttttcaaaaa 4621231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 270 - 380
Target Start/End: Original strand, 8077641 - 8077753
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| |||| || |||| ||||||  ||| |    
T  8077641 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggct 8077740  T
Q  368 aagtccatacaga 380  Q
    |||||||||||||    
T  8077741 aagtccatacaga 8077753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 270 - 490
Target Start/End: Original strand, 32729539 - 32729758
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggata 368  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || |   ||||| |||||| ||||||| | || || |||| ||||||| ||  |    
T  32729539 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggca 32729638  T
Q  369 agtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    |||||||||||| | ||||||||| ||  || || | | ||| ||||| |||||||  ||||||||| | | | |||||  || ||| |||  |||||||    
T  32729639 agtccatacagagc-ttgctctggctttaaatggggtc-cccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccga 32729736  T
Q  469 gttttcaaaaacaaaaagtctt 490  Q
    ||||||||||| ||||| ||||    
T  32729737 gttttcaaaaaaaaaaaatctt 32729758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 7197449 - 7197405
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7197449 aacccatttggggttggcctagtggttggcttgggatcttggagt 7197405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 363
Target Start/End: Original strand, 24216973 - 24217065
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg 363  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |   |||||||||||| |||||||   ||||| |||| |||||||    
T  24216973 acccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcgg 24217065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 24674387 - 24674431
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24674387 aacccatttggggttggcctagtggttggcttgggatcttggagt 24674431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 34778336 - 34778380
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34778336 aacccatttggggttggcctagtggttggcttgggatcttggagt 34778380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 14258630 - 14258581
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgtt 319  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  14258630 aacccatttgggcttggcctagtggttggcttgggatcttggagtttgtt 14258581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 468
Target Start/End: Original strand, 18646847 - 18647045
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||| ||||||||||| |||||||||||||||| |||||| |||| || ||  |   |||||||| ||||||| |||| || |||| ||||||  ||| |    
T  18646847 aacctatttggggttgacctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctggtgccaatttcggtgggct 18646946  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||| ||||| || |||||||||| ||  ||||||||| ||   |||| |||||||| ||||||||| ||||| ||||| || ||||||||  ||||||    
T  18646947 aagtctataca-aagtttgctctggctttaaacggagcc-cctgtaagtgggcggtgagattgatcccctcgaattagtcgattcttgaatcggataccg 18647044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 380
Target Start/End: Complemental strand, 27455069 - 27454957
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgggga--t 367  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || ||||||| ||||||| ||  |    
T  27455069 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcggtgagct 27454970  T
Q  368 aagtccatacaga 380  Q
    |||||||||||||    
T  27454969 aagtccatacaga 27454957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 29057541 - 29057496
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  29057541 caacccatttggggttggcctagtggttggtttgggatcttggagt 29057496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 380
Target Start/End: Original strand, 46607804 - 46607916
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||||||||||||||| |||||||||||||||| || |   |  ||||||||| ||||||| | || || |||| ||||||  ||| |    
T  46607804 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 46607903  T
Q  368 aagtccatacaga 380  Q
    |||||||||||||    
T  46607904 aagtccatacaga 46607916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 47091683 - 47091728
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  47091683 caacccatttggggttggcctagtggttggcttgagatcttggagt 47091728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 168193 - 168239
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  168193 gcaacccatttggagttggcctagtggttggcttgggatcttagagt 168239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 23734110 - 23734326
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg--ggat 367  Q
    |||||||||||||||||  |||| |||||||||||||||| || | || |   |   |||||||| ||||||| | || ||||||| |||||||  || |    
T  23734110 aacccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggct 23734209  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    |||||||||||||  |||||| ||  ||  ||||| ||| ||| ||||| ||||||||||||| |||| ||  | ||||| || ||||||||  |||||     
T  23734210 aagtccatacagag-tttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggatacca 23734308  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  23734309 agttttcaaaaaaaaaaa 23734326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 23741302 - 23741518
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg--ggat 367  Q
    |||||||||||||||||  |||| |||||||||||||||| || | || |   |   |||||||| ||||||| | || ||||||| |||||||  || |    
T  23741302 aacccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggct 23741401  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    |||||||||||||  |||||| ||  ||  ||||| ||| ||| ||||| ||||||||||||| |||| ||  | ||||| || ||||||||  |||||     
T  23741402 aagtccatacagag-tttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggatacca 23741500  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  23741501 agttttcaaaaaaaaaaa 23741518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 268 - 409
Target Start/End: Complemental strand, 25237194 - 25237052
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-gga 366  Q
    ||||||||||| | ||||||||| ||||| | ||||||||||||||| || ||  |||||||||||| ||||||| | || |  |||| ||||||| ||     
T  25237194 gcaacccatttagagttggcctaatggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtggg 25237095  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcc 409  Q
     |||||||||||||  |||||||||  |||||| || ||||||    
T  25237094 caagtccatacagagttttgctctgacttagaatggtgcctcc 25237052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 1095193 - 1095152
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagtgt 316  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  1095193 atttggggttggtctagtggttggcttgggatcttggagtgt 1095152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 7766930 - 7766886
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||| |||||||||||||||||| |||||||||||||||||    
T  7766930 aacccattcggggttggcctagtggttagcttgggatcttggagt 7766886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 2537698 - 2537737
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatctt 309  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  2537698 aacccatttggggttggcctagtggttggattgggatctt 2537737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 314
Target Start/End: Complemental strand, 46113600 - 46113561
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagt 46113561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 485
Target Start/End: Complemental strand, 8254856 - 8254740
Alignment:
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    ||||| |||||||||||| ||||||| ||  ||||| ||| ||| ||||| |||||||  ||||||||| | ||| ||||| || ||||||||  |||||    
T  8254856 taagttcatacagaactt-gctctggctttaaacggggcc-cccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggatacc 8254759  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  8254758 gagttttcaaaaaaaaaaa 8254740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 473
Target Start/End: Original strand, 24122021 - 24122220
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataagt 371  Q
    |||||||||||||| ||||||||||||||||||||||| || || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |||||    
T  24122021 catttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 24122120  T
Q  372 ccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagtt 471  Q
    ||||||||| | ||||||||| ||  ||||| | ||||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||||||    
T  24122121 ccatacagagc-ttgctctggctttaaacgg-ggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtt 24122218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 39714845 - 39714760
Alignment:
Q  280 gggttggcctagtgg--ttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg 363  Q
    |||||||| ||||||  ||||||||||||||||||||||| |   |||||||||||||||| ||| ||| | | ||||||||||||    
T  39714845 gggttggcatagtggcgttggcttgggatcttggagtgtgctcctctcaaggtctcaagtttgattctcctcggtgccgatttcgg 39714760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 16899507 - 16899552
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttggagtgtg 317  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||    
T  16899507 cccatttggggttggcctagtggttgacttgtaatcttggagtgtg 16899552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 20487394 - 20487349
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||    
T  20487394 caacccatttggggttggtttagtggttggctcgggatcttggagt 20487349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 52135127 - 52135168
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  52135127 ccatttggggttggtctagtggttgacttgggatcttggagt 52135168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 2272342 - 2272382
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagt 2272382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 6776139 - 6776182
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  6776139 aacccatttggg-ttggcctagtggttggtttgggatcttggagt 6776182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 23232468 - 23232428
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttg 310  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  23232468 aacccatttgggattggcctagtggttgacttgggatcttg 23232428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 25496691 - 25496619
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||| |||||| |||||||||||| |||||||||||||||||||  || |   || |||||||||||||||||    
T  25496691 aacctatttggcgttggcctagtgattggcttgggatcttggagattgctcctcttaaggtctcaagttcgat 25496619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 30677170 - 30677214
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||    
T  30677170 aacccatttggggttgacctagtggttggtttgggatctaggagt 30677214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 1818730 - 1818772
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| || |||||||| ||||||||||||    
T  1818730 cccatttggggttggcctggtagttggcttaggatcttggagt 1818772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 31162748 - 31162794
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagtgtgttt 320  Q
    |||||||||||| |||||||||||| ||| ||||||||| |||||||    
T  31162748 catttggggttgacctagtggttggtttgagatcttggattgtgttt 31162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 1378891 - 1378936
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||  ||||||| ||||||||| ||||||||||||||||    
T  1378891 caacccatttaaggttggcttagtggttgacttgggatcttggagt 1378936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 7578419 - 7578452
Alignment:
Q  286 gcctagtggttggcttgggatcttggagtgtgtt 319  Q
    ||||||||||||||||||||||||||||| ||||    
T  7578419 gcctagtggttggcttgggatcttggagtttgtt 7578452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 809216 - 809260
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||| | |||||||||| |||||||| |||||||||||||||    
T  809216 aacccatctagggttggcctcgtggttggtttgggatcttggagt 809260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 1378743 - 1378783
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||| |||||||||| ||||| ||||||||||    
T  1378743 catttggggttggtctagtggttgacttggaatcttggagt 1378783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 3334794 - 3334842
Alignment:
Q  294 gttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    ||||||||| |||||| ||||||| | | ||||||||||||||||||||    
T  3334794 gttggcttgagatcttagagtgtgctcttctcaaggtctcaagttcgat 3334842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 7946838 - 7946878
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttg 310  Q
    |||||||||||||| | |||||||||||||||| |||||||    
T  7946838 aacccatttggggtcgacctagtggttggcttgagatcttg 7946878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 15786370 - 15786314
Alignment:
Q  295 ttggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactctttg 350  Q
    |||||||||||||| |||||||| |  |||||||||||||| ||||||| |||||||    
T  15786370 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttg 15786314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 33700840 - 33700757
Alignment:
Q  280 gggttggcctagtggt--tggcttgggatcttggagtgtgttt-tcctcaaggtctcaagttcgatactctttgatgccgattt 360  Q
    ||||||||||||||||  |||||||| |||| |||||||| |  |||||||||||||| ||||||| |||| || |||| ||||    
T  33700840 gggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 40802270 - 40802226
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| | |||||||||||| ||| |||||||    
T  40802270 aacccatttggggttggctttgtggttggcttgagatattggagt 40802226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 34147340 - 34147555
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtg-ttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||||  || |||||| ||||||| | || || |||| ||||||  |||     
T  34147340 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaa-gtctcaggttcgattccctctggtgccaatttcggtgggc 34147438  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  34147439 taagtccatacagagc-ttgctctggctttaaacgg-gccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 34147536  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  34147537 gagttttcaaaaaaaaaaa 34147555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 34159956 - 34160171
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtg-ttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||||  || |||||| ||||||| | || || |||| ||||||  |||     
T  34159956 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaa-gtctcaggttcgattccctctggtgccaatttcggtgggc 34160054  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  34160055 taagtccatacagagc-ttgctctggctttaaacgg-gccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 34160152  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  34160153 gagttttcaaaaaaaaaaa 34160171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 487
Target Start/End: Complemental strand, 21148713 - 21148497
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctca-aggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || |||  ||| |||||||||||||||| | || |  |||| ||||||  |||     
T  21148713 aacccatttggagttggcctagtggttggcttgggatcttggagtttgcttt-ttcagaggtctcaagttcgattccctctagtgccaatttcgatgggc 21148615  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||  ||  ||||| ||  ||| ||||| |||||||  |||| |||| ||| | ||||| || ||||||||  |||||    
T  21148614 taagtccatacagagc-ttgctctgactttaaacggggc--cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatacc 21148518  T
Q  467 gagttttcaaaaacaaaaagt 487  Q
    ||||||||||||| |||||||    
T  21148517 gagttttcaaaaaaaaaaagt 21148497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 479
Target Start/End: Complemental strand, 15360301 - 15360092
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| | || || |||| ||||||  ||| |    
T  15360301 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 15360202  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||| | |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  15360201 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 15360104  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  15360103 agttttcaaaaa 15360092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 3222837 - 3222624
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctca-aggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||   |||||| |||||||| ||||||| | || || |||| ||||||  |||     
T  3222837 aacccatttggggttggcctagtggttggcttgggatcttgcagtttg--ctcctcagaggtctcaggttcgattccctctggtgccaatttcggtgggc 3222740  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||  ||  ||||| ||  ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  3222739 taagtccatacagagc-ttgctctgtctttaaacggggc--cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 3222643  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  3222642 gagttttcaaaaaaaaaaa 3222624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 9238965 - 9239013
Alignment:
Q  266 aagcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9238965 aagcaacccatttggggttggcctagtggttggcttgggatcttggagt 9239013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 270 - 486
Target Start/End: Complemental strand, 5360274 - 5360058
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||| |||||||| |||||||||||||||||||||||| || ||  |   |||||||| ||||||| | || | ||||| ||||||  ||| |    
T  5360274 aacccatttggagttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggct 5360175  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||  ||  |||||| || ||||||||| |||||||  |||| |||| ||||| ||||| || |||  |||  ||||||    
T  5360174 aagtccatacagagc-ttgctctgactttaaacggaacc-cccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccg 5360077  T
Q  468 agttttcaaaaacaaaaag 486  Q
    |||||| ||||| ||||||    
T  5360076 agttttgaaaaaaaaaaag 5360058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 473
Target Start/End: Original strand, 11448871 - 11449068
Alignment:
Q  276 tttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataagtcc 373  Q
    ||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| |||| || |||| ||||||  ||| |||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtcc 11448970  T
Q  374 atacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagtttt 473  Q
    ||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || ||||||||  ||| ||||||||    
T  11448971 atacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 12591631 - 12591675
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12591631 aacccatttggggttggcctagtggttggcttgggatcttggagt 12591675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 22576061 - 22576105
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22576061 aacccatttggggttggcctagtggttggcttgggatcttggagt 22576105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 402
Target Start/End: Original strand, 3907553 - 3907667
Alignment:
Q  288 ctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcggggataagtccatacagaactttgc 387  Q
    ||||||||||| |||||||||||| ||||| |   |||||| | ||||||||||| |||| || |||| |||| | ||  |||||||||||  |||||||    
T  3907553 ctagtggttggtttgggatcttggggtgtgctcctctcaagatttcaagttcgattctctctggtgccaattttgcgggcaagtccatacaagactttgc 3907652  T
Q  388 tctggtttagaacgg 402  Q
    |||||||||||||||    
T  3907653 tctggtttagaacgg 3907667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 424
Target Start/End: Original strand, 10377714 - 10377864
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtcc 373  Q
    |||||||||||||| ||| ||||||||| |||||||||||||| |    ||||||||||| |||| || | || || |||| ||||||| ||  ||||||    
T  10377714 atttggggttggcccagttgttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccctatggtgccaatttcggtgggcaagtcc 10377813  T
Q  374 atacagaactttgctctggtttagaacggagcctcccacaagtaggcggtg 424  Q
    ||||| | ||||||||||  ||| ||||| ||| ||||||||| |||||||    
T  10377814 atacatagctttgctctgacttaaaacggggccccccacaagtgggcggtg 10377864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 13753232 - 13753278
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  13753232 gcaacccatttggggttggcctagtggttggctttggatcttggagt 13753278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 8479308 - 8479353
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttggagtgtg 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  8479308 cccatttggggttggcctagtggttgacttgggatcttggagtgtg 8479353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 33499468 - 33499537
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttc 339  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || |   |||||||||||| ||||    
T  33499468 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttc 33499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 479
Target Start/End: Original strand, 9208246 - 9208455
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggata 368  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||| || |   |||||||||||| ||||||| | |  || |||| ||||||| ||  |    
T  9208246 aacccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggca 9208345  T
Q  369 agtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccga 468  Q
    |||||||||||| | ||||| ||| ||  || || ||| ||| ||||| |||||||  |||| || | ||  | ||||| || |||| ||||||||||||    
T  9208346 agtccatacagagccttgctttggctttaaatggggcc-cccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccga 9208444  T
Q  469 gttttcaaaaa 479  Q
    ||||| |||||    
T  9208445 gttttaaaaaa 9208455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 21982521 - 21982483
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttg 310  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21982521 cccatttggggttggcctagtggttggcttgggatcttg 21982483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 9843935 - 9843976
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  9843935 ccatttggggttggtctagtggttggcttgggatcttggagt 9843976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 11007159 - 11007203
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  11007159 aacccatttggggttgatctagtggttggcttgggatcttggagt 11007203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 28672061 - 28672105
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  28672061 aacccatttggggttggcctagtggttgacttgagatcttggagt 28672105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 654354 - 654305
Alignment:
Q  265 aaagcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| |||||||||||| |||||||||||| || ||||||||||||||||    
T  654354 aaagaaacccatttgggtttggcctagtggctgacttgggatcttggagt 654305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 33718661 - 33718617
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||    
T  33718661 aacccatttagggttggtctagtggttggtttgggatcttggagt 33718617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 17081259 - 17081213
Alignment:
Q  268 gcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| |||| | |||||||||||||| ||||||||||||    
T  17081259 gcaacccatttgaggttagtctagtggttggcttaggatcttggagt 17081213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 17420860 - 17420905
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgt 316  Q
    ||||||| |||||||| ||| |||||| ||||||||||||||||||    
T  17420860 acccattcggggttggtctaatggttgacttgggatcttggagtgt 17420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 32059643 - 32059428
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| |  | || |||| ||||||  ||| |    
T  32059643 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggct 32059544  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | |||||  |||||| |||  ||||||    
T  32059543 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccg 32059446  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  32059445 agttttcaaaaaaaaaaa 32059428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 392
Target Start/End: Complemental strand, 19145612 - 19145491
Alignment:
Q  272 cccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataag 370  Q
    |||||||||||||||||||||||||| |||||||||||||||| || |   |||||||||||  ||||||| | || || |||| ||||||| ||  |||    
T  19145612 cccatttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaag 19145513  T
Q  371 tccatacagaactttgctctgg 392  Q
    |||||||||| |||||||||||    
T  19145512 tccatacagagctttgctctgg 19145491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 380
Target Start/End: Complemental strand, 23270726 - 23270613
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |   |  |||||||||||||||||   ||  |||||| ||||||  |||     
T  23270726 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggc 23270627  T
Q  367 taagtccatacaga 380  Q
    ||||||||||||||    
T  23270626 taagtccatacaga 23270613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 270 - 484
Target Start/End: Complemental strand, 27498934 - 27498720
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| || |   ||  |||||||| ||||||| | || || |||| ||||||  ||| |    
T  27498934 aacccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggct 27498835  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||| | | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  27498834 aagtccatacatagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 27498737  T
Q  468 agttttcaaaaacaaaa 484  Q
    |||||||||||| ||||    
T  27498736 agttttcaaaaaaaaaa 27498720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 270 - 392
Target Start/End: Original strand, 33025474 - 33025598
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |   |||||| |||||| || ||| | | |||||||||||||||  ||  |    
T  33025474 aacccatttggggttggcctcgcggttggcttgggatcttggagtgtgctcctctcaagatctcaactttgattccccttgatgccgatttcgatggatt 33025573  T
Q  368 aagtccatacagaactttgctctgg 392  Q
    ||||||||||| | || ||||||||    
T  33025574 aagtccatacaaagctatgctctgg 33025598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 13108652 - 13108608
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13108652 aacccatttggggttggcctagtggttggcttgggatcttggagt 13108608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 22392695 - 22392739
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22392695 aacccatttggggttggcctagtggttggcttgggatcttggagt 22392739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 25586926 - 25586970
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25586926 aacccatttggggttggcctagtggttggcttgggatcttggagt 25586970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 273 - 485
Target Start/End: Complemental strand, 8484861 - 8484649
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggataag 370  Q
    |||||||||||||||||||||||||||||||||||||||||| || |   |   |||||||| ||| ||| | || || |||| ||||||  ||| ||||    
T  8484861 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaag 8484762  T
Q  371 tccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagt 470  Q
    | |||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||||||    
T  8484761 ttcatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagt 8484664  T
Q  471 tttcaaaaacaaaaa 485  Q
    ||||||||| |||||    
T  8484663 tttcaaaaaaaaaaa 8484649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 378
Target Start/End: Complemental strand, 31288149 - 31288039
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| | ||||| |||| ||||||  ||| |    
T  31288149 aacccattttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggtt 31288050  T
Q  368 aagtccataca 378  Q
    |||||||||||    
T  31288049 aagtccataca 31288039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 11926705 - 11926489
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| || |   |   |||||||| ||| ||| | || || |||| ||||||  ||| |    
T  11926705 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtgggct 11926606  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| || ||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  11926605 aagtccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccg 11926507  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||| ||||| |||||    
T  11926506 agttttaaaaaaaaaaaa 11926489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 485
Target Start/End: Complemental strand, 15641308 - 15641094
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| || |   |   |||||||| ||||||| | || ||  ||| ||||||  ||| |    
T  15641308 aacccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggct 15641209  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  15641208 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg-atcggataccg 15641112  T
Q  468 agttttcaaaaacaaaaa 485  Q
    |||||||||||| |||||    
T  15641111 agttttcaaaaaaaaaaa 15641094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 4603774 - 4603815
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4603774 ccatttggggttggcctagtggttggcttgggatcttggagt 4603815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 12317354 - 12317309
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12317354 caacccatttggggttggcctagtggttggcttggaatcttggagt 12317309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 15931048 - 15931097
Alignment:
Q  265 aaagcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  15931048 aaaggaacccatttggggttggcctagtggttagcttgggatcttggagt 15931097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 38631161 - 38631120
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38631161 ccatttggggttggcctagtggttggcttgggatcttggagt 38631120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 13038657 - 13038613
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  13038657 aacccatttggggttggcctagtggttggtttgggatcttggagt 13038613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 402
Target Start/End: Original strand, 25343233 - 25343368
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcga--tactctttgatgccgatttcgg-gga 366  Q
    |||||||||||||||||||||||||||| ||||  |||||||| |||| | |  ||||||||||||||| ||  | |||| ||||||  ||||||| ||     
T  25343233 aacccatttggggttggcctagtggttgacttgaaatcttggattgtgctcttttcaaggtctcaagtttgatttcctctctgatgctaatttcggtggg 25343332  T
Q  367 taagtccatacagaactttgctctggtttagaacgg 402  Q
    ||||| |||||||| ||| ||||| | |||||||||    
T  25343333 taagttcatacagagcttagctctagcttagaacgg 25343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 478
Target Start/End: Original strand, 30485822 - 30486030
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctca-aggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    ||||||||||||||||||| || |||||||||||||||||||||| ||  | | ||| |||||||| ||||||| | || || || | ||||||  |||     
T  30485822 aacccatttggggttggcccagcggttggcttgggatcttggagtttg-ctccttcagaggtctcaggttcgattcactctggtgtcaatttcggtgggc 30485920  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||  ||| ||| ||||| |||||||  |||| |||| ||| | |||||||| |||| |||  |||||    
T  30485921 taagtccatacagagc-ttgctctggctttaaacgatgcc-cccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggatacc 30486018  T
Q  467 gagttttcaaaa 478  Q
    ||||||||||||    
T  30486019 gagttttcaaaa 30486030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 7085832 - 7085785
Alignment:
Q  267 agcaacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  7085832 agcaacccatttggggctggcttagtggttggcttgggatcttggagt 7085785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 36954813 - 36954856
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  36954813 acccatttggggttggcctagtggttgccttgggatcttggagt 36954856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 3715113 - 3715068
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  3715113 caaccaatttggggttggcctagtggttggtttgggatcttggagt 3715068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 15485495 - 15485422
Alignment:
Q  270 aacccatttggggttggcctagtgg-ttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||| |   |||||||||||| |||||||    
T  15485495 aacccatttggggttggcctagcgggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgat 15485422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 25750811 - 25750770
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  25750811 ccatttggggttggcctagtggttgacttgggatcttggagt 25750770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 380
Target Start/End: Complemental strand, 33709703 - 33709592
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||||||||| |||||||||||||||||||||||||||||||| || |   |   |||||||||||||||| | || || |||| ||||||  ||| |    
T  33709703 aacccatttggg-ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggct 33709605  T
Q  368 aagtccatacaga 380  Q
    |||||||||||||    
T  33709604 aagtccatacaga 33709592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 1827733 - 1827689
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  1827733 aacccatttggggttgacctagtggttggcttgagatcttggagt 1827689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 34049816 - 34049860
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  34049816 aacccatttggggttgggctagtagttggcttgggatcttggagt 34049860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 34310136 - 34310180
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  34310136 aacccatttggggttggcctagtggtcggcttggaatcttggagt 34310180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 38684202 - 38684416
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    |||||| |||||||||||| |||||||| |||||||||||||||| || |   |   |||||||| ||||||| | || || |||| ||||||  ||| |    
T  38684202 aacccacttggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 38684301  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| |||||  ||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  38684302 aagtccatacagagc-ttgctctggctttaaacgg-gcc-cccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccg 38684398  T
Q  468 agttttcaaaaacaaaaa 485  Q
    | ||||||||||||||||    
T  38684399 atttttcaaaaacaaaaa 38684416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 19230469 - 19230514
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtg 315  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||    
T  19230469 aacccaattggggttggcctagtggttagtttgggatcttggagtg 19230514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 406
Target Start/End: Original strand, 36895419 - 36895556
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggata 368  Q
    |||||||||| | ||| | ||||| || |||||||||||||||||||| |   |||||||| ||| ||||||| | || || | || ||||||| ||  |    
T  36895419 aacccatttgagattgacgtagtgattagcttgggatcttggagtgtgctcctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtca 36895518  T
Q  369 agtccatacagaactttgctctggtttagaacggagcc 406  Q
    |||||||||| | ||||||||||| |||||||| ||||    
T  36895519 agtccatacaaagctttgctctggcttagaacgtagcc 36895556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 37397706 - 37397751
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||    
T  37397706 caacctatttggggttggtctagtggttggcttgtgatcttggagt 37397751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 15971321 - 15971281
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  15971321 catttagggttggcttagtggttggcttgggatcttggagt 15971281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 22253345 - 22253309
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatctt 309  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22253345 ccatttggggttggtctagtggttggcttgggatctt 22253309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 339
Target Start/End: Original strand, 40330628 - 40330696
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttc 339  Q
    ||||||||| ||||||| |||||||| ||||| ||||||||||| || |   |||||||||||||||||    
T  40330628 acccatttgaggttggcttagtggttagcttgagatcttggagtttgctcctctcaaggtctcaagttc 40330696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 42006791 - 42006831
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  42006791 catttggggttgggctagtggttggcttgagatcttggagt 42006831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 6014473 - 6014439
Alignment:
Q  280 gggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||| ||||||||||||||||||||    
T  6014473 gggttggcctagtgattggcttgggatcttggagt 6014439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 8780475 - 8780544
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    ||||||| ||||| ||||||||||| | | ||||||||||||||| |   |||||||||||| |||||||    
T  8780475 ccatttgaggttgacctagtggttgacatcggatcttggagtgtgctcctctcaaggtctcaggttcgat 8780544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 342
Target Start/End: Complemental strand, 16074108 - 16074043
Alignment:
Q  277 ttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgat 342  Q
    |||||||||||||| ||||||| ||| |||||| |||| || |   ||||||||||||||||||||    
T  16074108 ttggggttggcctaatggttggattgagatcttagagtatgctactctcaaggtctcaagttcgat 16074043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 27487755 - 27487714
Alignment:
Q  273 ccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  27487755 ccatttggggttggcctagtggttgatttgggattttggagt 27487714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 485
Target Start/End: Original strand, 37972904 - 37972992
Alignment:
Q  396 agaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccgagttttcaaaaacaaaaa 485  Q
    |||||||||| |||| ||||| ||| |||| ||||||||| ||||| || || | ||||  ||| ||||||||||||||||||| |||||    
T  37972904 agaacggagc-tcccgcaagtgggcagtgagattgatcccctcgaattaatcgacccttagatcgaataccgagttttcaaaaaaaaaaa 37972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 363
Target Start/End: Original strand, 42193491 - 42193572
Alignment:
Q  282 gttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg 363  Q
    |||||||||||||||| |||||||||||||||| || || ||   |||||||| |||||||   || ||||||| |||||||    
T  42193491 gttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcgg 42193572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 2332037 - 2331997
Alignment:
Q  295 ttggcttgggatcttggagtgtg-ttttcctcaaggtctca 334  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  2332037 ttggcttgggatcttggagtgtgttttttctcaaggtctca 2331997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 5067295 - 5067339
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||| ||||| |||||||||| ||||||||||| ||||    
T  5067295 aacccatttggagttggtctagtggttgacttgggatcttcgagt 5067339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 11465110 - 11465066
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||| |||||||||||||| ||||||||  ||||||||||    
T  11465110 aacccatttcgggttggcctagtgattggcttgaaatcttggagt 11465066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 16616113 - 16616157
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||| | ||||| |||| |||||||||||||||||||||    
T  16616113 aacccatttgagattggcttagtagttggcttgggatcttggagt 16616157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 270 - 479
Target Start/End: Complemental strand, 5285 - 5076
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |   |  ||||||||| ||||||| | || || |||| ||||||  ||| |    
T  5285 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 5186  T
Q  368 aagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaataccg 467  Q
    ||||||||||||| | ||||||||| ||  ||||| ||| ||| ||| | |||||||  |||| |||| ||| | ||||| || |||| |||  ||||||    
T  5185 aagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccg 5088  T
Q  468 agttttcaaaaa 479  Q
    ||||||||||||    
T  5087 agttttcaaaaa 5076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 270 - 485
Target Start/End: Original strand, 40319 - 40533
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctca-aggtctcaagttcgatactctttgatgccgatttcg--ggga 366  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||  | | ||| |||||||| ||||||| | || || |||| ||||||  |||     
T  40319 aacccatttggggttggcctagtggttggcttaggatcttggagtttg-ctccttcagaggtctcaggttcgattccctctggtgccaatttcggtgggc 40417  T
Q  367 taagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtgaaattgatcccttcgaactagtcaatccttgaatcaaatacc 466  Q
    |||||||||||||| | ||||||||| ||  ||||| ||| ||| ||||| |||||||  |||| |||| ||| | ||||| || |||| |||  |||||    
T  40418 taagtccatacagagc-ttgctctggctttaaacggggcc-cccgcaagtgggcggtgggattggtccc-tcggattagtcgattcttggatcggatacc 40514  T
Q  467 gagttttcaaaaacaaaaa 485  Q
    ||||||||||||| |||||    
T  40515 gagttttcaaaaaaaaaaa 40533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 8610 - 8566
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8610 aacccatttggggttggcctagtggttggcttgggatcttggagt 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 392
Target Start/End: Complemental strand, 29340 - 29222
Alignment:
Q  275 atttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg-ggataagtcc 373  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||   |||||||||| | ||||||| | |  |||||||  ||||||  | |||||||    
T  29340 atttgggattggcctagtggttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcgattcccgctgatgccattttcggtcggtaagtcc 29241  T
Q  374 atacagaactttgctctgg 392  Q
    ||||||| |||||||||||    
T  29240 atacagagctttgctctgg 29222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 380
Target Start/End: Complemental strand, 97569 - 97457
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcg--gggat 367  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || |   |  ||||||||| ||||||| | || || |||| ||||||  ||| |    
T  97569 aacccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggct 97470  T
Q  368 aagtccatacaga 380  Q
    |||||||||||||    
T  97469 aagtccatacaga 97457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 1255 - 1215
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1255 catttggggttggcctagtggttggcttgggatcttggagt 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 10892 - 10852
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10892 catttggggttggcctagtggttggcttgggatcttggagt 10852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 9498 - 9458
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9498 catttggggttggcctagtggttggcttgggatcttggagt 9458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 12199 - 12159
Alignment:
Q  274 catttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12199 catttggggttggcctagtggttggcttgggatcttggagt 12159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 14985 - 15029
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  14985 aacccatttggggttggcctagtggttggcctgggatcttggagt 15029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 41847 - 41803
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  41847 aacccatttggggttggcctagtggttgacttgggatcttggagt 41803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 53073 - 53030
Alignment:
Q  271 acccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  53073 acccatttgggattggcctagtggttggcttgggatcttggagt 53030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 26746 - 26653
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagtgtgttttcctcaaggtctcaagttcgatactctttgatgccgatttcgg 363  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || ||| |   |||||||| ||| ||| |||| | ||||| |||||||    
T  26746 aacccatttggggttggcctactggttggcttaggatcttggagtttgcttttcaagaggtctcatgtttgattctctcttatgccaatttcgg 26653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 7512 - 7468
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| |||||||||||||||||| |||||||||||||||||||||    
T  7512 aacctatttggggttggcctagtagttggcttgggatcttggagt 7468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 66756 - 66800
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  66756 aacccatttgggattggtctagtggttggcttgggatcttggagt 66800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 8383 - 8338
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||    
T  8383 caacccatttggggttggtttagtggttggctcgggatcttggagt 8338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 39143 - 39301
Alignment:
Q  327 aggtctcaagttcgatactctttgatgccgatttcgg--ggataagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtg 424  Q
    |||||||||||||||| | || || |||| |||||||  || || ||||||||||||||| | ||||| ||  ||||| ||| ||| ||||| |||||||    
T  39143 aggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaactt-gttctggctttaaacggggcc-cccgcaagtgggcggtg 39240  T
Q  425 aaattgatcccttcgaactagtcaatccttgaatcaaataccgagttttcaaaaacaaaaa 485  Q
      |||| |||| ||| | ||||| || |||| |||| |||||||||||||||||| |||||    
T  39241 ggattggtcccctcggattagtcgattcttggatcagataccgagttttcaaaaataaaaa 39301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 27769 - 27814
Alignment:
Q  269 caacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||    
T  27769 caacccatttggggttggtctagtggttggtttgggattttggagt 27814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 12957 - 12913
Alignment:
Q  270 aacccatttggggttggcctagtggttggcttgggatcttggagt 314  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||    
T  12957 aacctatttgggattggcctagtggttgacttgggatcttggagt 12913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 314
Target Start/End: Complemental strand, 150 - 117
Alignment:
Q  281 ggttggcctagtggttggcttgggatcttggagt 314  Q
    |||||||||||||||||||||| |||||||||||    
T  150 ggttggcctagtggttggcttgtgatcttggagt 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 309
Target Start/End: Original strand, 5052 - 5085
Alignment:
Q  276 tttggggttggcctagtggttggcttgggatctt 309  Q
    ||||||||||||||||| ||||||||||||||||    
T  5052 tttggggttggcctagtagttggcttgggatctt 5085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 485
Target Start/End: Original strand, 161860 - 162018
Alignment:
Q  327 aggtctcaagttcgatactctttgatgccgatttcgg--ggataagtccatacagaactttgctctggtttagaacggagcctcccacaagtaggcggtg 424  Q
    |||||||| ||||||| | || || |||| |||||||  || |||||||||||||| ||| ||||||| ||  || || ||| ||| ||||| |||||||    
T  161860 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggcttttaatggggcc-cccgcaagtgggcggtg 161957  T
Q  425 aaattgatcccttcgaactagtcaatccttgaatcaaataccgagttttcaaaaacaaaaa 485  Q
      |||| |||| ||| | ||||| || |||| |||| |||||||||||||||||| |||||    
T  161958 ggattggtcccctcggattagtcgattcttggatcagataccgagttttcaaaaaaaaaaa 162018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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