View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21204_low_1 (Length: 683)

Name: NF21204_low_1
Description: NF21204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21204_low_1
NF21204_low_1
[»] chr5 (66 HSPs)
chr5 (8-461)||(29284279-29284732)
chr5 (473-609)||(1098634-1098769)
chr5 (488-621)||(7313844-7313976)
chr5 (479-608)||(13654516-13654644)
chr5 (476-582)||(27895898-27896004)
chr5 (486-610)||(3100416-3100540)
chr5 (486-621)||(1098639-1098773)
chr5 (473-620)||(7313826-7313972)
chr5 (487-593)||(12165296-12165403)
chr5 (506-621)||(2673841-2673956)
chr5 (473-621)||(40100081-40100229)
chr5 (479-575)||(25713738-25713834)
chr5 (473-608)||(13654507-13654641)
chr5 (486-582)||(5110547-5110644)
chr5 (476-608)||(16899688-16899820)
chr5 (473-608)||(40100085-40100220)
chr5 (488-593)||(10495224-10495330)
chr5 (474-602)||(1100070-1100198)
chr5 (504-608)||(42247559-42247663)
chr5 (474-597)||(13356155-13356278)
chr5 (473-529)||(17225160-17225216)
chr5 (507-602)||(35032302-35032397)
chr5 (482-604)||(1100064-1100186)
chr5 (507-593)||(9004979-9005065)
chr5 (473-536)||(18261598-18261661)
chr5 (474-608)||(10437645-10437778)
chr5 (504-581)||(36137044-36137122)
chr5 (479-529)||(40515231-40515281)
chr5 (475-536)||(2673847-2673908)
chr5 (555-608)||(25792927-25792979)
chr5 (519-582)||(884910-884974)
chr5 (480-621)||(43506112-43506240)
chr5 (480-536)||(43506173-43506229)
chr5 (565-608)||(13356113-13356155)
chr5 (480-582)||(13391536-13391639)
chr5 (504-582)||(15965985-15966064)
chr5 (504-582)||(15965988-15966067)
chr5 (504-582)||(21152620-21152699)
chr5 (504-582)||(21159755-21159834)
chr5 (504-582)||(21163562-21163641)
chr5 (473-536)||(25792925-25792988)
chr5 (504-601)||(43585524-43585620)
chr5 (555-601)||(1180755-1180800)
chr5 (555-609)||(3100411-3100464)
chr5 (489-601)||(13461565-13461675)
chr5 (489-601)||(13461565-13461675)
chr5 (501-582)||(15966675-15966757)
chr5 (489-601)||(18753626-18753736)
chr5 (489-601)||(18753626-18753736)
chr5 (501-582)||(31947476-31947558)
chr5 (489-582)||(43585527-43585620)
chr5 (507-611)||(17625672-17625776)
chr5 (506-582)||(18942018-18942095)
chr5 (555-608)||(32911573-32911626)
chr5 (480-608)||(33075072-33075200)
chr5 (506-582)||(37554379-37554456)
chr5 (506-582)||(37637301-37637378)
chr5 (552-604)||(5984061-5984112)
chr5 (479-527)||(7604277-7604325)
chr5 (560-608)||(9707092-9707139)
chr5 (560-604)||(17225173-17225216)
chr5 (479-515)||(20502095-20502131)
chr5 (626-658)||(29284200-29284232)
chr5 (555-583)||(33799879-33799907)
chr5 (473-537)||(36864500-36864564)
chr5 (479-515)||(40515281-40515317)
[»] chr3 (53 HSPs)
chr3 (477-608)||(36571377-36571507)
chr3 (480-608)||(611587-611714)
chr3 (479-609)||(4190633-4190762)
chr3 (474-608)||(12744908-12745042)
chr3 (474-608)||(52215887-52216021)
chr3 (479-621)||(611576-611717)
chr3 (481-608)||(10841704-10841831)
chr3 (477-582)||(29241512-29241618)
chr3 (474-610)||(45736686-45736822)
chr3 (486-582)||(4190661-4190757)
chr3 (519-611)||(39836910-39837001)
chr3 (479-582)||(105404-105507)
chr3 (521-608)||(2128408-2128494)
chr3 (489-582)||(29076557-29076650)
chr3 (479-625)||(36571365-36571510)
chr3 (486-572)||(39836908-39836994)
chr3 (501-601)||(40326464-40326563)
chr3 (489-601)||(44544173-44544278)
chr3 (484-571)||(21970510-21970597)
chr3 (484-571)||(21992946-21993033)
chr3 (479-538)||(36566712-36566771)
chr3 (474-604)||(47334653-47334783)
chr3 (477-582)||(24596893-24596999)
chr3 (474-583)||(26244411-26244521)
chr3 (474-606)||(27224579-27224711)
chr3 (481-608)||(10872678-10872805)
chr3 (507-582)||(22528884-22528960)
chr3 (473-545)||(39964293-39964365)
chr3 (489-588)||(40326464-40326563)
chr3 (476-546)||(13900229-13900300)
chr3 (553-620)||(26104769-26104835)
chr3 (480-582)||(37897714-37897817)
chr3 (474-608)||(40470417-40470551)
chr3 (523-608)||(331846-331931)
chr3 (489-582)||(4181945-4182039)
chr3 (474-575)||(10872711-10872813)
chr3 (479-608)||(21217170-21217299)
chr3 (484-558)||(22152724-22152798)
chr3 (550-608)||(43599105-43599162)
chr3 (481-546)||(2128430-2128495)
chr3 (553-610)||(7601919-7601975)
chr3 (474-582)||(26121571-26121680)
chr3 (486-582)||(27224612-27224709)
chr3 (479-544)||(48191719-48191784)
chr3 (525-582)||(50466845-50466902)
chr3 (525-589)||(51760194-51760259)
chr3 (474-534)||(331879-331939)
chr3 (519-582)||(1043967-1044031)
chr3 (519-582)||(1086553-1086617)
chr3 (473-564)||(34327558-34327650)
chr3 (556-608)||(36566717-36566768)
chr3 (479-515)||(50660042-50660078)
chr3 (507-582)||(52638065-52638141)
[»] chr7 (63 HSPs)
chr7 (486-609)||(8169103-8169225)
chr7 (478-608)||(11602775-11602904)
chr7 (482-606)||(8169104-8169227)
chr7 (474-608)||(23797347-23797481)
chr7 (475-608)||(37491273-37491406)
chr7 (481-582)||(21099276-21099377)
chr7 (473-546)||(34840612-34840685)
chr7 (486-581)||(30457764-30457859)
chr7 (504-593)||(27163186-27163276)
chr7 (493-580)||(32599681-32599768)
chr7 (473-620)||(38940218-38940364)
chr7 (479-608)||(9555267-9555396)
chr7 (473-604)||(38940231-38940361)
chr7 (474-580)||(43813124-43813231)
chr7 (489-601)||(35160764-35160874)
chr7 (489-593)||(31549808-31549911)
chr7 (489-593)||(31549815-31549918)
chr7 (489-593)||(40211167-40211270)
chr7 (481-622)||(37491266-37491407)
chr7 (489-582)||(4027233-4027326)
chr7 (478-583)||(22752563-22752669)
chr7 (555-621)||(23797342-23797407)
chr7 (488-582)||(32599695-32599789)
chr7 (489-601)||(35160764-35160874)
chr7 (555-621)||(47535051-47535117)
chr7 (479-607)||(7701192-7701320)
chr7 (480-604)||(21387581-21387705)
chr7 (519-582)||(18091267-18091331)
chr7 (562-610)||(34840749-34840796)
chr7 (506-593)||(39970179-39970266)
chr7 (490-593)||(47778451-47778553)
chr7 (487-582)||(3341903-3341997)
chr7 (481-536)||(21387655-21387710)
chr7 (504-582)||(24211580-24211659)
chr7 (474-608)||(43103071-43103205)
chr7 (555-621)||(2456330-2456395)
chr7 (474-536)||(2943211-2943273)
chr7 (501-601)||(6580520-6580619)
chr7 (479-604)||(9555264-9555389)
chr7 (474-536)||(10095718-10095780)
chr7 (474-544)||(16777891-16777961)
chr7 (475-608)||(18654553-18654686)
chr7 (475-545)||(18820001-18820071)
chr7 (481-582)||(19688105-19688207)
chr7 (501-601)||(30005902-30006001)
chr7 (521-582)||(32549867-32549929)
chr7 (504-589)||(46578290-46578376)
chr7 (550-603)||(1741893-1741944)
chr7 (474-582)||(18654545-18654654)
chr7 (501-593)||(27163191-27163284)
chr7 (519-583)||(31417561-31417626)
chr7 (506-582)||(33471521-33471598)
chr7 (479-582)||(785585-785688)
chr7 (507-582)||(3838151-3838227)
chr7 (550-610)||(6847281-6847340)
chr7 (473-513)||(21857067-21857107)
chr7 (507-582)||(22752592-22752668)
chr7 (519-582)||(27942357-27942421)
chr7 (558-610)||(28228993-28229044)
chr7 (506-581)||(31319549-31319625)
chr7 (552-608)||(31813418-31813473)
chr7 (486-546)||(34840730-34840790)
chr7 (475-515)||(41395766-41395806)
[»] chr4 (84 HSPs)
chr4 (487-608)||(16667076-16667196)
chr4 (480-621)||(37255676-37255816)
chr4 (473-624)||(11796583-11796733)
chr4 (475-621)||(11796579-11796724)
chr4 (489-610)||(5535728-5535848)
chr4 (473-621)||(37255680-37255827)
chr4 (473-608)||(44171432-44171564)
chr4 (480-582)||(22020121-22020223)
chr4 (492-608)||(4386330-4386445)
chr4 (473-608)||(3094274-3094408)
chr4 (481-582)||(4386329-4386430)
chr4 (479-582)||(3740341-3740444)
chr4 (486-621)||(5535708-5535842)
chr4 (475-582)||(16667096-16667203)
chr4 (474-610)||(3511714-3511850)
chr4 (504-618)||(41459411-41459525)
chr4 (474-610)||(19934637-19934773)
chr4 (481-608)||(20215574-20215693)
chr4 (481-608)||(36072577-36072704)
chr4 (477-567)||(2865015-2865106)
chr4 (476-539)||(46518496-46518559)
chr4 (474-608)||(54164812-54164946)
chr4 (474-608)||(54164820-54164954)
chr4 (480-534)||(2401045-2401099)
chr4 (480-546)||(15659940-15660006)
chr4 (479-604)||(20814540-20814665)
chr4 (479-608)||(29006842-29006971)
chr4 (479-608)||(38381980-38382109)
chr4 (481-575)||(44171473-44171565)
chr4 (480-608)||(38381983-38382111)
chr4 (474-610)||(40814673-40814810)
chr4 (489-601)||(54106489-54106601)
chr4 (486-582)||(2253986-2254082)
chr4 (475-535)||(28815863-28815923)
chr4 (486-608)||(19934645-19934767)
chr4 (474-608)||(28702060-28702194)
chr4 (480-610)||(34616220-34616350)
chr4 (489-587)||(39923847-39923945)
chr4 (473-575)||(2253952-2254054)
chr4 (519-580)||(9992636-9992698)
chr4 (474-536)||(20215566-20215628)
chr4 (508-593)||(54787004-54787089)
chr4 (482-582)||(2582815-2582916)
chr4 (487-548)||(6087500-6087561)
chr4 (486-582)||(6462744-6462841)
chr4 (473-546)||(16912437-16912510)
chr4 (479-536)||(20814533-20814590)
chr4 (480-568)||(31262640-31262729)
chr4 (474-582)||(39533788-39533897)
chr4 (487-603)||(46462392-46462508)
chr4 (481-621)||(3094273-3094412)
chr4 (555-619)||(15659931-15659994)
chr4 (548-604)||(19595512-19595567)
chr4 (479-601)||(24156154-24156275)
chr4 (506-593)||(25700478-25700566)
chr4 (521-608)||(3740355-3740441)
chr4 (504-582)||(21586950-21587029)
chr4 (559-614)||(31262679-31262733)
chr4 (504-582)||(43635868-43635947)
chr4 (501-582)||(11583739-11583821)
chr4 (474-575)||(12912608-12912710)
chr4 (486-582)||(18626720-18626815)
chr4 (548-614)||(19595999-19596064)
chr4 (559-621)||(22020110-22020171)
chr4 (554-604)||(22624472-22624520)
chr4 (479-608)||(29006839-29006968)
chr4 (553-607)||(33377494-33377547)
chr4 (501-601)||(34321397-34321496)
chr4 (473-515)||(35877316-35877358)
chr4 (473-515)||(37895359-37895401)
chr4 (550-607)||(6462788-6462844)
chr4 (504-582)||(12721674-12721754)
chr4 (504-582)||(12721677-12721757)
chr4 (481-609)||(21142096-21142224)
chr4 (480-533)||(27537061-27537114)
chr4 (559-608)||(28815868-28815916)
chr4 (489-593)||(40952554-40952657)
chr4 (555-603)||(50519343-50519389)
chr4 (479-582)||(16170942-16171046)
chr4 (477-545)||(17657977-17658045)
chr4 (489-588)||(20787571-20787670)
chr4 (552-588)||(34595716-34595752)
chr4 (552-588)||(34595760-34595796)
chr4 (548-603)||(44551272-44551325)
[»] chr6 (36 HSPs)
chr6 (474-606)||(13462932-13463063)
chr6 (486-608)||(13462940-13463061)
chr6 (482-566)||(24111148-24111232)
chr6 (519-611)||(28991451-28991544)
chr6 (476-536)||(32124203-32124263)
chr6 (486-608)||(18491672-18491794)
chr6 (474-583)||(3012391-3012501)
chr6 (489-588)||(3418782-3418881)
chr6 (481-536)||(5085434-5085489)
chr6 (472-582)||(18491693-18491804)
chr6 (523-582)||(24111148-24111207)
chr6 (473-536)||(31632186-31632249)
chr6 (486-608)||(8449585-8449709)
chr6 (486-608)||(8458389-8458513)
chr6 (476-621)||(16120966-16121111)
chr6 (480-580)||(14173395-14173496)
chr6 (480-580)||(14177931-14178032)
chr6 (555-624)||(31632188-31632256)
chr6 (479-582)||(15517122-15517226)
chr6 (501-588)||(21478579-21478667)
chr6 (479-610)||(32254825-32254956)
chr6 (504-582)||(10731505-10731584)
chr6 (504-582)||(19687496-19687575)
chr6 (501-601)||(4156365-4156464)
chr6 (504-589)||(9908165-9908251)
chr6 (486-544)||(26527261-26527319)
chr6 (473-515)||(30438745-30438787)
chr6 (477-582)||(31714537-31714643)
chr6 (555-608)||(16199127-16199179)
chr6 (519-583)||(33053796-33053861)
chr6 (519-582)||(3212273-3212337)
chr6 (550-582)||(3673848-3673880)
chr6 (482-609)||(6032972-6033099)
chr6 (555-583)||(13276517-13276545)
chr6 (486-546)||(15718462-15718522)
chr6 (489-572)||(30460655-30460739)
[»] chr1 (81 HSPs)
chr1 (480-608)||(52112881-52113008)
chr1 (473-588)||(39940513-39940628)
chr1 (473-608)||(34768277-34768411)
chr1 (473-608)||(52112883-52113017)
chr1 (474-608)||(52923322-52923456)
chr1 (481-608)||(19175595-19175722)
chr1 (477-620)||(42660352-42660493)
chr1 (479-621)||(34768273-34768414)
chr1 (473-582)||(38834609-38834719)
chr1 (479-608)||(5431345-5431473)
chr1 (487-575)||(36163970-36164058)
chr1 (494-610)||(39940506-39940621)
chr1 (479-608)||(19175592-19175721)
chr1 (480-582)||(42915652-42915754)
chr1 (479-608)||(5431348-5431476)
chr1 (481-582)||(6079070-6079171)
chr1 (480-608)||(52923330-52923458)
chr1 (477-608)||(1409051-1409182)
chr1 (480-588)||(6079090-6079198)
chr1 (477-582)||(36163990-36164097)
chr1 (479-582)||(47446664-47446767)
chr1 (481-608)||(51022723-51022848)
chr1 (479-608)||(24981848-24981977)
chr1 (481-546)||(6340639-6340704)
chr1 (473-546)||(19580262-19580335)
chr1 (473-534)||(42660355-42660416)
chr1 (507-602)||(2492508-2492603)
chr1 (487-602)||(17310430-17310545)
chr1 (475-610)||(31998189-31998324)
chr1 (476-615)||(9902568-9902706)
chr1 (495-621)||(38834605-38834731)
chr1 (504-582)||(41563029-41563108)
chr1 (480-582)||(44673918-44674020)
chr1 (473-535)||(1409129-1409191)
chr1 (486-548)||(10256792-10256854)
chr1 (550-608)||(14214605-14214662)
chr1 (473-582)||(29043452-29043562)
chr1 (481-610)||(34597525-34597647)
chr1 (481-610)||(34953902-34954031)
chr1 (550-608)||(45010845-45010902)
chr1 (504-589)||(48636747-48636833)
chr1 (473-538)||(12750559-12750624)
chr1 (506-582)||(41563028-41563105)
chr1 (489-582)||(42140364-42140455)
chr1 (489-588)||(4682952-4683051)
chr1 (553-620)||(10256848-10256913)
chr1 (552-608)||(25547478-25547533)
chr1 (479-601)||(11989323-11989445)
chr1 (489-587)||(21852452-21852550)
chr1 (504-582)||(31909778-31909857)
chr1 (477-536)||(34597522-34597581)
chr1 (507-589)||(34598894-34598977)
chr1 (479-534)||(42761457-42761512)
chr1 (477-575)||(43738607-43738706)
chr1 (504-601)||(48605099-48605195)
chr1 (474-536)||(3384222-3384284)
chr1 (538-604)||(6340634-6340699)
chr1 (474-536)||(14214608-14214670)
chr1 (489-601)||(18023628-18023738)
chr1 (487-588)||(23392563-23392664)
chr1 (489-601)||(45925259-45925369)
chr1 (552-582)||(49586325-49586355)
chr1 (474-539)||(47762-47827)
chr1 (552-589)||(2091771-2091808)
chr1 (480-608)||(3013615-3013743)
chr1 (482-606)||(3549788-3549912)
chr1 (487-536)||(3606274-3606322)
chr1 (506-582)||(8751463-8751540)
chr1 (506-582)||(8751464-8751541)
chr1 (475-608)||(9902568-9902700)
chr1 (477-582)||(13288367-13288472)
chr1 (506-582)||(15278597-15278674)
chr1 (487-536)||(19580196-19580245)
chr1 (506-582)||(31909781-31909858)
chr1 (480-621)||(42915641-42915781)
chr1 (480-608)||(48083509-48083637)
chr1 (553-593)||(12030310-12030349)
chr1 (492-572)||(13288352-13288432)
chr1 (489-588)||(15285257-15285356)
chr1 (550-582)||(27864495-27864527)
chr1 (489-588)||(37215187-37215286)
[»] chr2 (47 HSPs)
chr2 (486-588)||(41824272-41824374)
chr2 (479-582)||(44274546-44274649)
chr2 (473-609)||(41824267-41824402)
chr2 (486-608)||(14952776-14952898)
chr2 (489-608)||(44274549-44274667)
chr2 (480-608)||(41805281-41805409)
chr2 (482-608)||(31101956-31102082)
chr2 (489-601)||(30202499-30202609)
chr2 (486-582)||(18731303-18731400)
chr2 (486-582)||(43542929-43543026)
chr2 (474-608)||(15119776-15119910)
chr2 (479-621)||(45472404-45472546)
chr2 (479-611)||(13333451-13333583)
chr2 (473-621)||(23143480-23143628)
chr2 (473-621)||(23555270-23555418)
chr2 (489-593)||(37396226-37396329)
chr2 (480-610)||(1961314-1961444)
chr2 (507-622)||(27964277-27964391)
chr2 (479-608)||(25270863-25270992)
chr2 (489-593)||(9071220-9071323)
chr2 (473-534)||(23143484-23143545)
chr2 (473-534)||(23555274-23555335)
chr2 (473-546)||(27964282-27964355)
chr2 (479-611)||(41056892-41057024)
chr2 (519-576)||(43893155-43893212)
chr2 (474-621)||(41805273-41805420)
chr2 (477-545)||(45472412-45472480)
chr2 (507-593)||(4637029-4637115)
chr2 (486-608)||(13333458-13333580)
chr2 (558-621)||(14952759-14952821)
chr2 (474-608)||(26003434-26003568)
chr2 (489-583)||(27881251-27881346)
chr2 (474-608)||(32143405-32143539)
chr2 (504-582)||(43341161-43341240)
chr2 (555-608)||(23738399-23738453)
chr2 (489-582)||(29573829-29573922)
chr2 (489-582)||(33618229-33618322)
chr2 (507-583)||(17866211-17866288)
chr2 (507-575)||(32630445-32630514)
chr2 (506-582)||(36490510-36490587)
chr2 (489-593)||(37396219-37396322)
chr2 (519-582)||(4898197-4898261)
chr2 (519-582)||(4945591-4945655)
chr2 (519-582)||(17843983-17844047)
chr2 (479-539)||(27331835-27331895)
chr2 (474-534)||(37195051-37195111)
chr2 (519-582)||(43514800-43514864)
[»] chr8 (46 HSPs)
chr8 (480-608)||(24820303-24820430)
chr8 (477-582)||(13841850-13841955)
chr8 (479-608)||(24820305-24820433)
chr8 (488-588)||(24418907-24419007)
chr8 (479-617)||(6260613-6260751)
chr8 (504-621)||(36307986-36308102)
chr8 (504-620)||(17800624-17800739)
chr8 (473-582)||(24418879-24418988)
chr8 (473-608)||(13841855-13841990)
chr8 (474-608)||(28882663-28882797)
chr8 (479-608)||(34326249-34326378)
chr8 (482-609)||(2296481-2296608)
chr8 (480-607)||(5888341-5888468)
chr8 (474-608)||(33070164-33070298)
chr8 (504-582)||(35969694-35969773)
chr8 (523-608)||(10117018-10117103)
chr8 (479-608)||(15037754-15037884)
chr8 (482-623)||(17800636-17800775)
chr8 (486-582)||(36308003-36308099)
chr8 (474-608)||(28882671-28882805)
chr8 (552-610)||(2296479-2296536)
chr8 (508-593)||(19293038-19293123)
chr8 (479-608)||(24287792-24287921)
chr8 (487-592)||(29916143-29916249)
chr8 (474-582)||(7484649-7484758)
chr8 (475-606)||(2805813-2805944)
chr8 (489-582)||(5420219-5420312)
chr8 (507-608)||(7258617-7258718)
chr8 (501-582)||(8568852-8568934)
chr8 (481-610)||(27502906-27503035)
chr8 (482-575)||(37508942-37509036)
chr8 (473-534)||(2627172-2627233)
chr8 (552-589)||(4274657-4274694)
chr8 (555-608)||(5888343-5888395)
chr8 (504-588)||(8568849-8568934)
chr8 (489-582)||(33934094-33934185)
chr8 (559-608)||(35781234-35781282)
chr8 (479-544)||(42749059-42749124)
chr8 (553-610)||(44521327-44521383)
chr8 (479-536)||(45145460-45145517)
chr8 (489-588)||(9203410-9203509)
chr8 (550-582)||(10983880-10983912)
chr8 (550-601)||(11301958-11302007)
chr8 (550-601)||(11302905-11302954)
chr8 (552-608)||(24052906-24052961)
chr8 (506-582)||(33934111-33934186)
[»] scaffold0756 (1 HSPs)
scaffold0756 (489-593)||(3533-3636)
[»] scaffold0542 (1 HSPs)
scaffold0542 (489-593)||(3436-3539)
[»] scaffold0148 (2 HSPs)
scaffold0148 (486-621)||(21117-21250)
scaffold0148 (473-606)||(21121-21252)
[»] scaffold1786 (1 HSPs)
scaffold1786 (487-588)||(523-624)
[»] scaffold0340 (1 HSPs)
scaffold0340 (504-582)||(14065-14144)
[»] scaffold0294 (2 HSPs)
scaffold0294 (489-604)||(12931-13041)
scaffold0294 (481-527)||(13000-13046)
[»] scaffold0136 (1 HSPs)
scaffold0136 (489-601)||(22459-22569)
[»] scaffold0149 (1 HSPs)
scaffold0149 (474-582)||(24638-24747)
[»] scaffold0036 (1 HSPs)
scaffold0036 (476-572)||(89599-89696)
[»] scaffold0013 (1 HSPs)
scaffold0013 (555-603)||(58381-58427)
[»] scaffold0009 (1 HSPs)
scaffold0009 (488-575)||(216312-216400)


Alignment Details
Target: chr5 (Bit Score: 365; Significance: 0; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 8 - 461
Target Start/End: Complemental strand, 29284732 - 29284279
Alignment:
Q  8 cgaagaaaatttaaattgattaaaaattaaaattaggagtaagtgatcagttgagtaagtctaatttattgggaaaaaatggaaatagggttactatttg 107  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29284732 cgaaaaaaaattaaattgattaaaaatttaaattaggagtaagtgatcagttgagtaagtctaatttattaggaaaaaatggaaatagggttactatttg 29284633  T
Q  108 ggatagaggaagatgaacttgaaaatgtacgaaggaaaaaatgaccgcgcgaggaagacgaagcttaacgaattaaggaagatcatgaagctcgttaatg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  29284632 ggatagaggaagatgaacttgaaaatgtacgaaggaaaaaatgattgcgcgaggaagatgaagcttaacgaattaaggaaggtcatgaagctcgttaatg 29284533  T
Q  208 gtgttcaatggtcattgtttgtgtttcaaaatatcatccaagccaaaggaaatttgcttggatcctcgaaggaaatttccgccatagttgannnnnnnca 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  29284532 gtgttcaatggtcattgtttgtgtttcaaaatatcatccaagccaaaggaaatttgcttggatcctcgaaggaaatttccgccatagttgatttttttca 29284433  T
Q  308 tcatttcaacaataatgagaaccatcttagatgtgcatctatgtctacatgtatgttgtctagtctaataatgtctgaggtctattgtacgaatatcatt 407  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  29284432 tcatttcaacaataatgaggaccatcttagatgtgcatctatgtctatatgtatgttgtctaatctaataatgtctgatgtctattgtacgaatatcatt 29284333  T
Q  408 gtatgaaccgtatcagacacaaagcacatgactataaataggtcttctatgatt 461  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||| |||||||    
T  29284332 gtatgaaccgtatcagacacaaaagacataactgtaaataggtcttttatgatt 29284279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 473 - 609
Target Start/End: Complemental strand, 1098769 - 1098634
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||| ||||||||||||||||| | |||||||||| | | ||||||| ||||||||||| |||||| | | || ||||||||||||||||||    
T  1098769 tccctccggtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagtctatatatagaccacatacatcatttattgaat 1098670  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgat 609  Q
    ||| |||||| ||| || |||| ||||||||||||||    
T  1098669 gaatctaaaaagtc-aacttttacttataatagtgat 1098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 488 - 621
Target Start/End: Original strand, 7313844 - 7313976
Alignment:
Q  488 ttataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||| ||||||| |||||||| ||| | |||||||||||| |||||||| |||||| | | || |||||||||||||||| ||||||||||| |||     
T  7313844 ttataagtaaaagttcactttttaaattcattcaataaatgatatatgtagtctatatatagaccacatacatcatttattgattgaacctaaaaagtc- 7313942  T
Q  588 aaattttgcttataatagtgatcaaagggagtat 621  Q
    || |||||||||||||||||| |  |||||||||    
T  7313943 aacttttgcttataatagtgaccggagggagtat 7313976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 13654644 - 13654516
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| |||||||||||||| || |||||||| ||| | |||||||||||||||| |||| ||||||   | || ||||||||||||||||||||||||    
T  13654644 cggtcactattataagcaaaaattcactttttaaattcattcaataaatgatgtatttagtctatatatggaccacatacatcatttattgaatgaacct 13654545  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    |||| ||||| | ||| |||||||||||||    
T  13654544 aaaaagtcaata-tttacttataatagtga 13654516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 582
Target Start/End: Original strand, 27895898 - 27896004
Alignment:
Q  476 cttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaa 575  Q
    ||||||||| |||||||| |||||||| | |||||||||| | | ||||||||||||||||||| |||||| |  ||| |||||||||||||| ||||||    
T  27895898 cttcggtcactattataaacaaaagttcattttttagattcatttaataaatgatgtatgtagtctatatataggtcacatacatcatttattaaatgaa 27895997  T
Q  576 cctaaaa 582  Q
    |||||||    
T  27895998 cctaaaa 27896004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 486 - 610
Target Start/End: Original strand, 3100416 - 3100540
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacg 584  Q
    |||||||||||||| || || ||||||||| | ||||||||||||||||||||| ||| ||| | ||||||||||||||| |||||||||| |||||| |    
T  3100416 tattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctataataaagatcatatacatcattaattgaatgaatctaaaatg 3100515  T
Q  585 tcaaaattttgcttataatagtgatc 610  Q
    | ||| |||  |||||||||||||||    
T  3100516 t-aaattttcacttataatagtgatc 3100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 486 - 621
Target Start/End: Original strand, 1098639 - 1098773
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||| || |||||| | |  | |||||| ||||||| |||||| ||||||  |    
T  1098639 tattataagtaaaagttgactttttagattcattcaataaatgatgtatgtggtctatatatagactacatacattatttattaaatgaatctaaaaaat 1098738  T
Q  586 caaaattttgcttataatagtgatcaaagggagtat 621  Q
     ||| |||||||||||||||||| |  |||||||||    
T  1098739 -aaacttttgcttataatagtgaccggagggagtat 1098773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 473 - 620
Target Start/End: Complemental strand, 7313972 - 7313826
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||| ||||||||||||||||||||||||||| || | |||||||||||||||||| || |||||| | |  | ||| ||||||||||||||    
T  7313972 tccctccggtcactattataagcaaaagttgactttttaggttcaatcaataaatgatgtatgtggtctatatatagactacatatatcatttattgaat 7313873  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagta 620  Q
    |||  ||||| ||  || |||| ||||||| ||||| || ||||||||    
T  7313872 gaatttaaaaagt-gaacttttacttataaaagtgaccagagggagta 7313826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 487 - 593
Target Start/End: Original strand, 12165296 - 12165403
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    ||||||||||||  ||||||||||||||| | | ||| |||||||||||| || |||| || ||||||||||||||||| |||||||||||||||||  |    
T  12165296 attataagcaaattttgactttttagattcatttaattaatgatgtatgtggtatataatataaatcatatacatcattaattgaatgaacctaaaaaat 12165395  T
Q  586 caaaattt 593  Q
    ||||||||    
T  12165396 caaaattt 12165403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 621
Target Start/End: Complemental strand, 2673956 - 2673841
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataata 604  Q
    |||||||||| | ||||||||||||| ||||||| ||||| | | | || ||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  2673956 tttttagatttattcaataaatgatgcatgtagtctatattatagaccacatacatcatttattgaatgtacctaaaaagtcaaaa-tttgcttataata 2673858  T
Q  605 gtgatcaaagggagtat 621  Q
    |||| | |||| |||||    
T  2673857 gtgaccgaaggaagtat 2673841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 621
Target Start/End: Complemental strand, 40100229 - 40100081
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgacttttt-agattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaa 571  Q
    ||||| |||||| |||||||||||||| || | ||||| ||||| | ||| |||||||||||||||||| ||||| | | || | |||||||||||| ||    
T  40100229 tccctccggtcactattataagcaaaaattcatttttttagattcattcagtaaatgatgtatgtagttcatatatagaccacacacatcatttattaaa 40100130  T
Q  572 tgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||  ||||| ||| || |||||||||||||||||| |  |||||||||    
T  40100129 tgaatttaaaaagtc-aatttttgcttataatagtgaacggagggagtat 40100081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 575
Target Start/End: Complemental strand, 25713834 - 25713738
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaa 575  Q
    ||||||||||||||| |||||||||| |||||||||| | |||||||||||| ||||| || |||||| | |  |||||||| ||||| ||||||||    
T  25713834 cggtcattattataaacaaaagttgattttttagattcattcaataaatgatatatgtggtctatatatagacgatatacataatttactgaatgaa 25713738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 608
Target Start/End: Original strand, 13654507 - 13654641
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||| ||||||||| |||  |||||||||||| || | |||||||||||||||||| ||  ||||| | |  | ||||||||||||||||||    
T  13654507 tccctccggtcactattataagtaaatattgactttttaggttcattcaataaatgatgtatgtggtccatatatagactaaatacatcatttattgaat 13654606  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||  ||||| ||  || ||||||||||||||||||    
T  13654607 gaatttaaaaagt-gaatttttgcttataatagtga 13654641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 582
Target Start/End: Original strand, 5110547 - 5110644
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||  |||||| |||||||||||| | ||||||||| || ||| || | ||||| | |||||| ||||||||||||||||||||||||||||    
T  5110547 tattataagagaaagttcactttttagattcattcaataaataatatatataatctatattagaaatcaaatacatcatttattgaatgaacctaaaa 5110644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 16899688 - 16899820
Alignment:
Q  476 cttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatga 574  Q
    ||||| ||| || ||||| ||||||||   |||||||||| | | | ||||||| ||||||||| ||||| | |||| |||||||||||||| |||||||    
T  16899688 cttcgatcactaatataaacaaaagtttgatttttagattcatttattaaatgacgtatgtagtctatattataaattatatacatcatttaatgaatga 16899787  T
Q  575 acctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||  ||||| ||||||||||| ||||||    
T  16899788 acctaaaa-atcaaacttttgcttatattagtga 16899820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 608
Target Start/End: Original strand, 40100085 - 40100220
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| || ||| |||||||||||||| ||||||||||| ||| | | |||||||||||| ||| || ||||||  ||  | |||||||||||| |||||    
T  40100085 tccctccgttcactattataagcaaaaattgactttttaaattcatttaataaatgatgtgtgtggtctatatatgaactacatacatcatttactgaat 40100184  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| ||||||     || ||||||||||||||||||    
T  40100185 gaatctaaaaaaatgaatttttgcttataatagtga 40100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 488 - 593
Target Start/End: Original strand, 10495224 - 10495330
Alignment:
Q  488 ttataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtc 586  Q
    ||||||| |||  |||| |||||||||| | |||||||||||||||||| ||||||| || | |||| || ||||||||||| ||||||| ||||| ||     
T  10495224 ttataagtaaattttgattttttagattcattcaataaatgatgtatgtggtttatattatagatcacattcatcatttattcaatgaacttaaaaagtg 10495323  T
Q  587 aaaattt 593  Q
    |||||||    
T  10495324 aaaattt 10495330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 602
Target Start/End: Complemental strand, 1100198 - 1100070
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||| |||||||||||||||| ||  | ||||||||| | ||| ||||||||||||||||| | || || | | || |||||||||||| |||||    
T  1100198 ccctccggtaattattataagcaaaactttgcattttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaat 1100099  T
Q  573 gaacctaaaacgtcaaaattttgcttataa 602  Q
    ||| |||||| || ||| ||||||||||||    
T  1100098 gaatctaaaatgt-aaacttttgcttataa 1100070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 608
Target Start/End: Complemental strand, 42247663 - 42247559
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataa 602  Q
    |||||||||||| |  ||||||||||||||||| |  |||| || | | ||  ||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  42247663 actttttagattcatccaataaatgatgtatgtggcctataatatagaccacgtacatcatttattgaatgaacataaaaagtcaaaa-tttgcttataa 42247565  T
Q  603 tagtga 608  Q
    ||||||    
T  42247564 tagtga 42247559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 597
Target Start/End: Complemental strand, 13356278 - 13356155
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagttta-tatacaaatcatatacatcatttattgaat 572  Q
    |||| ||||||||||||||||||||| |  ||||||||  || | |||||||||||||||||| ||| | || | |   || ||| ||||||||||||||    
T  13356278 ccctccggtcattattataagcaaaaatctactttttaagttcattcaataaatgatgtatgtggttcattaaataggccacatatatcatttattgaat 13356179  T
Q  573 gaacctaaaacgtcaaaattttgct 597  Q
    |||||||||| || |||||||||||    
T  13356178 gaacctaaaaagt-aaaattttgct 13356155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 17225160 - 17225216
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatga 529  Q
    ||||| ||||| |||||||||||||||||||||||||||| || | |||||||||||    
T  17225160 tccctccggtcgttattataagcaaaagttgactttttaggttcattcaataaatga 17225216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 602
Target Start/End: Original strand, 35032302 - 35032397
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataa 602  Q
    ||||||||| | ||| ||||||||||||||||| ||||  | ||||||||||||| ||| |||||||||| |||||| || ||| ||||||||||||    
T  35032302 ttttagattcattcattaaatgatgtatgtagtctataacaaaaatcatatacataattaattgaatgaatctaaaatgt-aaatttttgcttataa 35032397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 604
Target Start/End: Original strand, 1100064 - 1100186
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaa 580  Q
    ||||| ||||||||||||||| || ||||||||| | ||| |||||||||||||| || ||| ||| | |  | |||||||||||| ||||| || ||||    
T  1100064 tcattgttataagcaaaagtttacattttagattcattcattaaatgatgtatgtggtctataataaagactacatacatcatttaatgaattaatctaa 1100163  T
Q  581 aacgtcaaaattttgcttataata 604  Q
    || | |||| ||||||||||||||    
T  1100164 aatg-caaagttttgcttataata 1100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 593
Target Start/End: Original strand, 9004979 - 9005065
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    ||||||||| | | ||| ||||||||||||||| |||| || |||||| |||||| ||| ||||||||||||||||| ||||||||||    
T  9004979 ttttagattcatttaattaatgatgtatgtagtctataatataaatcacatacattattaattgaatgaacctaaaa-gtcaaaattt 9005065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 18261598 - 18261661
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||| |||||| ||||||||||||||||| ||||| |||||| | ||||||||| ||||||||    
T  18261598 tccctccggtcactattataagcaaaagttcactttatagattcattcaataaataatgtatgt 18261661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 608
Target Start/End: Complemental strand, 10437778 - 10437645
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatg 573  Q
    |||| |||||| |||||||||||||| |  || ||||||||| | | | ||||| ||||||||||| ||||   ||||||||||||||| | ||||||||    
T  10437778 ccctccggtcactattataagcaaaaatcaacattttagattcatttattaaattatgtatgtagtctataataaaatcatatacatcactaattgaatg 10437679  T
Q  574 aacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||  |||||   |||| |||| |||||||||||||    
T  10437678 aatttaaaa-tacaaagttttacttataatagtga 10437645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 581
Target Start/End: Original strand, 36137044 - 36137122
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaa 581  Q
    |||||||||||| | ||||| |||||||||||||||  ||| |  |||||| |||||||||| ||||||||||||||||    
T  36137044 actttttagattcattcaattaatgatgtatgtagtccataatttaaatcacatacatcattaattgaatgaacctaaa 36137122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 529
Target Start/End: Original strand, 40515231 - 40515281
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatga 529  Q
    |||||| ||||||||| |||||||||||||||||||| | |||||||||||    
T  40515231 cggtcactattataagtaaaagttgactttttagattcattcaataaatga 40515281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 536
Target Start/End: Original strand, 2673847 - 2673908
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||||||||| |||||||||||||  |||||||||||| |  | ||||||||||||||||||    
T  2673847 ccttcggtcactattataagcaaattttgactttttaggtacattcaataaatgatgtatgt 2673908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 608
Target Start/End: Original strand, 25792927 - 25792979
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||| ||||||||||||||| || ||| ||||||||||||||||||    
T  25792927 atacatcatttaatgaatgaacctaaaaagt-aaatttttgcttataatagtga 25792979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 884974 - 884910
Alignment:
Q  519 tcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||||||| ||  |||| | ||||||||||| ||||||||||| |||||||||||    
T  884974 tcaataaatgatgtatgtggtccatattataaatcatatacgtcatttattgagtgaacctaaaa 884910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 621
Target Start/End: Original strand, 43506112 - 43506240
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| |||||||||||||| || |||||||||||| | ||| |||||||||||||| ||            || |||||||||||| |||||||| |||    
T  43506112 ggtcactattataagcaaaatttcactttttagattcaatcattaaatgatgtatgtggt------------cacatacatcatttaatgaatgaatcta 43506199  T
Q  580 aaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||| || ||| |||||||||||||||||| || |||| ||||    
T  43506200 aaaagtgaaa-ttttgcttataatagtgaccagagggtgtat 43506240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 43506229 - 43506173
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||| |||||||||||||| || |||||||||||| | ||| ||||||||||||||    
T  43506229 ggtcactattataagcaaaatttcactttttagattcattcattaaatgatgtatgt 43506173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 608
Target Start/End: Complemental strand, 13356155 - 13356113
Alignment:
Q  565 tattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  13356155 tattgaatgaacctaaaaagt-aaaattttgcttataatagtga 13356113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 582
Target Start/End: Original strand, 13391536 - 13391639
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| ||||||||| ||||||  |||||||||||| | |||||||||||||||| | ||  || ||| | |  | |||||| |||||||||||||||||    
T  13391536 ggtcactattataagtaaaagtcaactttttagattcattcaataaatgatgtatttggtcaataatatagactaaatacataatttattgaatgaacct 13391635  T
Q  579 aaaa 582  Q
    ||||    
T  13391636 aaaa 13391639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Original strand, 15965985 - 15966064
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| || ||||| | ||| || |||||||||| |||||||||||||||||    
T  15965985 actttttaggttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaacctaaaa 15966064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 15966067 - 15965988
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| ||||||| || | | || |||||||||| |||||||||||||||||    
T  15966067 actttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacctaaaa 15965988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 21152699 - 21152620
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| ||  |||| | |||||| |||||||||| |||||||||||||||||    
T  21152699 actttttaggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaa 21152620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 21159834 - 21159755
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| ||  |||| | |||||| |||||||||| |||||||||||||||||    
T  21159834 actttttaggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaa 21159755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 21163641 - 21163562
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| ||  |||| | |||||| |||||||||| |||||||||||||||||    
T  21163641 actttttaggttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaa 21163562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 25792988 - 25792925
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||| |||||| |||||||||||||| || ||||||||| || | ||| ||||||||||||||    
T  25792988 tccctccggtcactattataagcaaaaatttactttttaggttcattcattaaatgatgtatgt 25792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 601
Target Start/End: Original strand, 43585524 - 43585620
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttata 601  Q
    ||||||||| || | ||||| |||||||||||| ||| |||| |  || || |||||||||| ||||||||||||||||| ||  ||||||||||||||    
T  43585524 actttttaggttcattcaattaatgatgtatgtggttcatattatgaaccacatacatcattaattgaatgaacctaaaaagt--aaattttgcttata 43585620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 601
Target Start/End: Original strand, 1180755 - 1180800
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttata 601  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||    
T  1180755 atacattatttattgaatgaacctaaaacgt-aaatttttgcttata 1180800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 609
Target Start/End: Complemental strand, 3100464 - 3100411
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgat 609  Q
    ||||||||||||||||||||| |||||| ||  || |||||||||||||||||||    
T  3100464 atacatcatttattgaatgaatctaaaatgt-taatttttgcttataatagtgat 3100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 601
Target Start/End: Complemental strand, 13461675 - 13461565
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||| | |||||||||||| ||| ||| ||  || || |||||||||| | ||||||||||||||| |||     
T  13461675 tataagcaaaa-ttgactttttaggttcattcatttaatgatgtatgtggttcataatatgaaccacatacatcattaaatgaatgaacctaaaaagtc- 13461578  T
Q  588 aaattttgcttata 601  Q
     |||||||||||||    
T  13461577 -aattttgcttata 13461565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 13461565 - 13461675
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||| | |||||||||||| ||| |||| |  || || |||||||||| | ||||||||||||||| |||     
T  13461565 tataagcaaaa-ttgactttttaggttcattcatttaatgatgtatgtggttcatattatgaaccacatacatcattaaatgaatgaacctaaaaagtc- 13461662  T
Q  588 aaattttgcttata 601  Q
     |||||||||||||    
T  13461663 -aattttgcttata 13461675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 582
Target Start/End: Complemental strand, 15966757 - 15966675
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||| || | ||||| |||||||||||| ||  ||| || ||| || |||||||||| |||||||||||||||||    
T  15966757 ttgactttttaggttcattcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaatgaacctaaaa 15966675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 601
Target Start/End: Complemental strand, 18753736 - 18753626
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||| | |||||||||||| ||| |||| | | | || |||||||||| | ||||||||||||||| |||     
T  18753736 tataagcaaaa-ttgactttttaggttcattcatttaatgatgtatgtggttcatattatagaccacatacatcattaaatgaatgaacctaaaaagtc- 18753639  T
Q  588 aaattttgcttata 601  Q
     |||||||||||||    
T  18753638 -aattttgcttata 18753626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 18753626 - 18753736
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||| | |||||||||||| || |||| ||  || || |||||||||| | ||||||||||||||| |||     
T  18753626 tataagcaaaa-ttgactttttaggttcattcatttaatgatgtatgtggtctataatatgaaccacatacatcattaaatgaatgaacctaaaaagtc- 18753723  T
Q  588 aaattttgcttata 601  Q
     |||||||||||||    
T  18753724 -aattttgcttata 18753736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 582
Target Start/End: Original strand, 31947476 - 31947558
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||||||| | ||||| ||| |||||||| ||| |||| |   ||||||||||||||| ||||| |||||||||||    
T  31947476 ttgactttttagattcattcaattaattatgtatgtggttcatattatggatcatatacatcattaattgattgaacctaaaa 31947558  T

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Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 43585620 - 43585527
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||| || ||||||||| || | ||||| |||||||||||| ||| ||| ||  || || |||||||||| |||||||||||||||||    
T  43585620 tataagcaaaattt-actttttaggttcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaattgaatgaacctaaaa 43585527  T

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Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 611
Target Start/End: Original strand, 17625672 - 17625776
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatag 605  Q
    ||||||||| | ||| |||||||||||||  ||||||| |||| |  | |||||||||||| |||||| | |||||||||  |  |||||||||||||||    
T  17625672 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgat-ttttgcttataatag 17625770  T
Q  606 tgatca 611  Q
    ||||||    
T  17625771 tgatca 17625776  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 18942095 - 18942018
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| || | ||||| |||||||||||| || ||||| |  || ||||||||||||| |||||||||||||||||    
T  18942095 tttttaggttcattcaattaatgatgtatgtggtctatattatgaaccatatacatcattaattgaatgaacctaaaa 18942018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 608
Target Start/End: Original strand, 32911573 - 32911626
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||| ||||||||||||||| ||  |  ||||||||||||||||||    
T  32911573 atacatcatttaatgaatgaacctaaaaagttgattttttgcttataatagtga 32911626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 608
Target Start/End: Complemental strand, 33075200 - 33075072
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| || |  |||||| || | ||| |||||||||||||| || |||| || | ||||||||| | ||| |||||||||| ||    
T  33075200 ggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctatagtaaagatcatatacgttattaattgaatgaatct 33075101  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    ||||  | ||| ||||||||||| ||||||    
T  33075100 aaaatat-aaagttttgcttatattagtga 33075072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 37554456 - 37554379
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||| | ||||| ||| |||||||||||||||| ||  || || |||||||||| ||||||||||| |||||    
T  37554456 tttttagattcattcaattaataatgtatgtagtttatattatgaaccacatacatcattaattgaatgaacttaaaa 37554379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 37637378 - 37637301
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| |||| ||||| ||| |||||||||||||||| ||  | ||| |||||||||| ||||||||||| |||||    
T  37637378 tttttaggttgattcaattaataatgtatgtagtttatattatgagtcacatacatcattaattgaatgaacttaaaa 37637301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 552 - 604
Target Start/End: Original strand, 5984061 - 5984112
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataata 604  Q
    ||||||||||||| |||||||||| |||||| | |||| ||||||||||||||    
T  5984061 catatacatcattaattgaatgaatctaaaatg-caaagttttgcttataata 5984112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 527
Target Start/End: Complemental strand, 7604325 - 7604277
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaat 527  Q
    |||||||||||||||| |||| ||||||||||||||  ||| |||||||    
T  7604325 cggtcattattataagtaaaatttgactttttagatatactgaataaat 7604277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 560 - 608
Target Start/End: Complemental strand, 9707139 - 9707092
Alignment:
Q  560 tcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||    
T  9707139 tcatttattgaatgaacctagaaagt-aaatttttgcttataatagtga 9707092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 560 - 604
Target Start/End: Complemental strand, 17225216 - 17225173
Alignment:
Q  560 tcatttattgaatgaacctaaaacgtcaaaattttgcttataata 604  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||    
T  17225216 tcatttattgaatgaacctaaaaagtc-aacttttgcttataata 17225173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 515
Target Start/End: Original strand, 20502095 - 20502131
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagatt 515  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  20502095 cggtccttattataagaaaaagttgactttttagatt 20502131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 626 - 658
Target Start/End: Complemental strand, 29284232 - 29284200
Alignment:
Q  626 tttcttaaatttgtgaaataagaatttagtttg 658  Q
    ||||| |||||||||||||||||||||||||||    
T  29284232 tttctaaaatttgtgaaataagaatttagtttg 29284200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 583
Target Start/End: Original strand, 33799879 - 33799907
Alignment:
Q  555 atacatcatttattgaatgaacctaaaac 583  Q
    |||||||||||||||||||||||||||||    
T  33799879 atacatcatttattgaatgaacctaaaac 33799907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 537
Target Start/End: Complemental strand, 36864564 - 36864500
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgta 537  Q
    ||||| || ||| ||||||||  ||||||| |||||||||||| | |||||||||||| ||||||    
T  36864564 tccctccgatcactattataaataaaagttcactttttagattcattcaataaatgatatatgta 36864500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 40515317 - 40515281
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagatt 515  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  40515317 cggtcactattataagcaaaagttcactttttagatt 40515281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 608
Target Start/End: Original strand, 36571377 - 36571507
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaac 576  Q
    |||||||| |||||||||||||||||   |||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  36571377 ttcggtcactattataagcaaaagtttcttttttagatttattcaataaatgatgtatgtagtctatatataaatcatatacatcatttaatgaatgaac 36571476  T
Q  577 ctaaaacgtcaaaattttgcttataatagtga 608  Q
     ||||| ||| || |||| |||||||||||||    
T  36571477 ttaaaaagtc-aacttttacttataatagtga 36571507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 608
Target Start/End: Original strand, 611587 - 611714
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| ||||||||| |||||||   |||||||||| | ||||||||||||||||||||| |||||| | | || |||||| ||||| ||||| ||||||    
T  611587 ggtcactattataagtaaaagtttgttttttagattaattcaataaatgatgtatgtagtctatatatagaccacatacattatttaatgaattaaccta 611686  T
Q  580 aaacgtcaaaattttgcttataatagtga 608  Q
    ||| ||| || ||||||||||||||||||    
T  611687 aaaagtc-aacttttgcttataatagtga 611714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 479 - 609
Target Start/End: Original strand, 4190633 - 4190762
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| ||||||||| |||| || | ||||||| || | ||||||||| ||||||||||  |||||| | | |  ||||||||||||||||||||||||    
T  4190633 cggtcactattataagaaaaaattcattttttagtttcattcaataaattatgtatgtagcctatatatagacctcatacatcatttattgaatgaacct 4190732  T
Q  579 aaaacgtcaaaattttgcttataatagtgat 609  Q
    |||| ||| || |||||||||||||||||||    
T  4190733 aaaaagtc-aacttttgcttataatagtgat 4190762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 608
Target Start/End: Complemental strand, 12745042 - 12744908
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    ||||||||||| |||||||||||||| || || ||||||||  | ||| |||||||||||||| || ||| ||| | | ||||||||||||| |||||||    
T  12745042 cccttcggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaat 12744943  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| |||||| || ||  ||||||||||||||||||    
T  12744942 gaatctaaaatgt-aagtttttgcttataatagtga 12744908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 608
Target Start/End: Complemental strand, 52216021 - 52215887
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| |  || ||||||||| ||||| |||||||||||||| || ||| ||| | ||||||||||||||  |||| ||    
T  52216021 ccctccggtcactattataagcaaaaatcaacattttagattcactcattaaatgatgtatgtggtctataataaagatcatatacatcatcaattgcat 52215922  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| |||||| || ||| ||||||||||||||||||    
T  52215921 gaatctaaaatgt-aaatttttgcttataatagtga 52215887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 621
Target Start/End: Complemental strand, 611717 - 611576
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| ||||||||||||||||||||||||||| || | ||| ||||| |||||||| || |||||| | |  | |||||||||||||||||| || ||    
T  611717 cggtcactattataagcaaaagttgactttttaggttaattcattaaataatgtatgtggtctatatatagactacatacatcatttattgaattaatct 611618  T
Q  579 aaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||   |||| |||| ||||||||||||| || | |||||||    
T  611617 aaaa-aacaaacttttacttataatagtgaccagatggagtat 611576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 10841831 - 10841704
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagt-ttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||||||||||||||||| |  || |||| |||| | | ||||||||||||||||||| | ||||| | | || ||||| ||||||||||||||| |||    
T  10841831 gtcattattataagcaaaaatctacatttttgatttatttaataaatgatgtatgtagtctaatatatagaccacatacaacatttattgaatgaatcta 10841732  T
Q  580 aaacgtcaaaattttgcttataatagtga 608  Q
    | |||| ||| ||||||||||||||||||    
T  10841731 atacgt-aaatttttgcttataatagtga 10841704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 582
Target Start/End: Complemental strand, 29241618 - 29241512
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaa 575  Q
    ||||||||||||||||||| ||| |  |||||||||||| | |||||||||||||||| | || |||| |||  |||| || ||||||||||| ||||||    
T  29241618 ttcggtcattattataagccaaaatcaactttttagattcattcaataaatgatgtatttggtctatattactgatcaaatgcatcatttattaaatgaa 29241519  T
Q  576 cctaaaa 582  Q
    |||||||    
T  29241518 cctaaaa 29241512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 474 - 610
Target Start/End: Original strand, 45736686 - 45736822
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| | ||   |||||||| | ||| |||||||||||||| || |||| || | ||||| ||||||||| |||||||    
T  45736686 ccctccggtcactattataagcaaaaatcgatagtttagattcattcattaaatgatgtatgtggtctataataaagatcatgtacatcattaattgaat 45736785  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    |||  |||||  | ||||||||||||||||||||||||    
T  45736786 gaatttaaaatat-aaaattttgcttataatagtgatc 45736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 486 - 582
Target Start/End: Complemental strand, 4190757 - 4190661
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||  || |||||| |    | |||||| |||||||||||||| ||||||    
T  4190757 tattataagcaaaagttgactttttaggttcattcaataaatgatgtatgaggtctatatataggctacatacataatttattgaatgaaactaaaa 4190661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 519 - 611
Target Start/End: Original strand, 39836910 - 39837001
Alignment:
Q  519 tcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatca 611  Q
    ||||||||||||||||||| | |||||| | | || ||||||||||||||||||||| |||||| || ||| ||||  |||||||||||||||    
T  39836910 tcaataaatgatgtatgtattctatatatagaccacatacatcatttattgaatgaatctaaaaagt-aaacttttatttataatagtgatca 39837001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 105507 - 105404
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| | ||||||||||||||||||||||||| || | |||||| || |||||||| || ||||||    ||| |||||||||||||| |||||| ||    
T  105507 cggtcacttttataagcaaaagttgactttttaggttcattcaatacattatgtatgtggtctatatatggttcacatacatcatttattcaatgaatct 105408  T
Q  579 aaaa 582  Q
    ||||    
T  105407 aaaa 105404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 608
Target Start/End: Original strand, 2128408 - 2128494
Alignment:
Q  521 aataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||| ||||||| |||||| | | || ||||||||||||||||||||| ||||||| |  || ||||||||||||||||||    
T  2128408 aataaatgatgcatgtagtctatatatagaccacatacatcatttattgaatgaatctaaaacat-gaatttttgcttataatagtga 2128494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 29076650 - 29076557
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||| ||||||||||||||| | ||||| |||||||||||| ||  || ||| |||||| ||| |||||| |||||||||||||||||    
T  29076650 tataagcaaaa-ttgactttttagattcattcaattaatgatgtatgtggtccatgatataaatcacatatatcattaattgaatgaacctaaaa 29076557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 625
Target Start/End: Complemental strand, 36571510 - 36571365
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| ||||||||| ||||||||||||||||  || | ||| |||||||||||| |  |||||||| | |  | |||||||||||||||||| || ||    
T  36571510 cggtcactattataagtaaaagttgactttttaagttcattcattaaatgatgtatatgatttatatatagactacatacatcatttattgaataaatct 36571411  T
Q  579 aaaacgtcaaaattttgcttataatagtgatcaaagggagtatttaa 625  Q
    ||||    ||| |||||||||||||||||| | || | |||||||||    
T  36571410 aaaa-aagaaacttttgcttataatagtgaccgaatgaagtatttaa 36571365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 572
Target Start/End: Complemental strand, 39836994 - 39836908
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||||||  ||||||| |||||||||||| | |||||||||||||||||| || |||||| | |  | ||||||||||||||||||    
T  39836994 tattataaataaaagtttactttttagattcattcaataaatgatgtatgtggtctatatatagaatacatacatcatttattgaat 39836908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 601
Target Start/End: Original strand, 40326464 - 40326563
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgctta 599  Q
    |||||||||| |||| | ||||| |||||||||||| ||| |||| | ||| || |||||||||| ||||||||||||||||| |||  |||||||||||    
T  40326464 ttgacttttttgattcattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattgaatgaacctaaaaagtc--aattttgctta 40326561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 601
Target Start/End: Complemental strand, 44544278 - 44544173
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    ||||||||||| |||||||||| | || | ||||| |||||||||||||||| ||| ||    || |||||||||| ||||||||||||||||| |||      
T  44544278 tataagcaaaa-ttgacttttttggttcattcaattaatgatgtatgtagttcataaac----cacatacatcattaattgaatgaacctaaaaagtc-- 44544186  T
Q  589 aattttgcttata 601  Q
    |||||||||||||    
T  44544185 aattttgcttata 44544173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 571
Target Start/End: Original strand, 21970510 - 21970597
Alignment:
Q  484 attattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaa 571  Q
    ||||||||||| ||||||| || ||||| ||| | ||||||||||||||||||||| |||||| | | || ||| || ||||||||||    
T  21970510 attattataagtaaaagtttacattttatattcattcaataaatgatgtatgtagtatatatatagaccacatatattatttattgaa 21970597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 571
Target Start/End: Original strand, 21992946 - 21993033
Alignment:
Q  484 attattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaa 571  Q
    ||||||||||| ||||||| || ||||| ||| | ||||||||||||||||||||| |||||| | | || ||| || ||||||||||    
T  21992946 attattataagtaaaagtttacattttatattcattcaataaatgatgtatgtagtatatatatagaccacatatattatttattgaa 21993033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 479 - 538
Target Start/End: Complemental strand, 36566771 - 36566712
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtag 538  Q
    |||||| |||||||||||||||||  ||||||||||| | ||||||||||||||| ||||    
T  36566771 cggtcactattataagcaaaagttttctttttagattcattcaataaatgatgtaggtag 36566712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 604
Target Start/End: Complemental strand, 47334783 - 47334653
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| |||||||||| ||||| |||| || || ||||||||| | ||| |||||||||||| |  | ||| ||| ||||||||||||||||| |||||||    
T  47334783 ccctccggtcattatcataagtaaaattttacattttagattcattcattaaatgatgtatatgatctataataaaaatcatatacatcattaattgaat 47334684  T
Q  573 gaacctaaaacgtcaaaattttgcttataata 604  Q
    |||  |||||   |||| ||||||||||||||    
T  47334683 gaatttaaaa-tacaaagttttgcttataata 47334653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 582
Target Start/End: Original strand, 24596893 - 24596999
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaa 575  Q
    |||||||||||||||||| |||| || || ||||||||| | |||||||| |||||||||  ||||| ||  | || |||||||| ||||||| ||||||    
T  24596893 ttcggtcattattataagtaaaaatttacattttagattcattcaataaacgatgtatgtgatttataatgtagattatatacattatttattcaatgaa 24596992  T
Q  576 cctaaaa 582  Q
    | |||||    
T  24596993 cttaaaa 24596999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 26244521 - 26244411
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| ||||||| |||||| ||  | ||||||||| | ||| |||||||||||||| || |||| || | | ||||||||||||| |||||||    
T  26244521 ccctccggtcactattataggcaaaattttgcattttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaat 26244422  T
Q  573 gaacctaaaac 583  Q
    ||| |||||||    
T  26244421 gaatctaaaac 26244411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 606
Target Start/End: Original strand, 27224579 - 27224711
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||| ||||| |  || ||||||||| | ||| ||||||||||||||  | ||| ||| |||| |||||||||||||| |||||    
T  27224579 ccctccggtcactattataaacaaaaatcaacattttagatttattcattaaatgatgtatgtgatctataataaaaattatatacatcatttaatgaat 27224678  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagt 606  Q
     || |||||| | | || ||||||||||||||||    
T  27224679 caatctaaaatg-ctaatttttgcttataatagt 27224711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 608
Target Start/End: Original strand, 10872678 - 10872805
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaaccta 579  Q
    |||| |||||||||||||| |  |  ||||| ||| | ||| ||||||||||||||  |||||| || | | ||||||||||||| |||||||||| |||    
T  10872678 gtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtgatttataataaagaccatatacatcattaattgaatgaatcta 10872777  T
Q  580 aaacgtcaaaattttgcttataatagtga 608  Q
    |||  | ||| ||||||||||||||||||    
T  10872778 aaatat-aaatttttgcttataatagtga 10872805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 22528960 - 22528884
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| | ||||| |||||||||||| |||||||| | | | || |||||||||| |||||||||||||||||    
T  22528960 ttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaacctaaaa 22528884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 545
Target Start/End: Original strand, 39964293 - 39964365
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat 545  Q
    ||||| |||||||||||||||||||||    |||||||||||| | | ||||||| ||||||||||| |||||    
T  39964293 tccctccggtcattattataagcaaaaaactactttttagattcattgaataaattatgtatgtagtctatat 39964365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 588
Target Start/End: Complemental strand, 40326563 - 40326464
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||||| |||||||||||| |||||| |||  || || |||||||||| |||||||||| | |||| ||||    
T  40326563 tataagcaaaa-ttgactttttaggttcattcaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaatgaatcaaaaaagtca 40326465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 546
Target Start/End: Original strand, 13900229 - 13900300
Alignment:
Q  476 cttcggtcattattataagcaaaagttgac-tttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    ||||||||| |||||||||||||| || || |||||||||| | |||||||||||| |||| ||| ||||||    
T  13900229 cttcggtcactattataagcaaaaattcacttttttagattcattcaataaatgatttatgcagtctatata 13900300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 620
Target Start/End: Complemental strand, 26104835 - 26104769
Alignment:
Q  553 atatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagta 620  Q
    |||||||||||| | ||||||||||||||| || ||| ||||||||||| |||||| || ||||||||    
T  26104835 atatacatcattaaatgaatgaacctaaaatgt-aaatttttgcttatattagtgaccagagggagta 26104769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 582
Target Start/End: Complemental strand, 37897817 - 37897714
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| |  || ||||| ||| | ||| ||||| |||||||| || |||| || | ||||||||||||||| |||||||||| ||    
T  37897817 ggtcactattataagcaaaaatcaacattttaaattcattcattaaattatgtatgtggtctataataaagatcatatacatcattaattgaatgaatct 37897718  T
Q  579 aaaa 582  Q
    ||||    
T  37897717 aaaa 37897714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 40470417 - 40470551
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    ||||||||||| || ||||||||||| || | |||||||||| | ||| ||||||| ||||||||| | || || | |  | |||| ||||||| |||||    
T  40470417 cccttcggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtagtctttattatagactacatacgtcatttaatgaat 40470516  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| ||||||  ||||| ||||||||||| ||||||    
T  40470517 gaatctaaaa-atcaaacttttgcttatattagtga 40470551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 608
Target Start/End: Original strand, 331846 - 331931
Alignment:
Q  523 taaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||||| || |||| || | || |||||||||||||| |||||||| |||||| ||  || ||||||||||||||||||    
T  331846 taaatgatgtatgtggtctataataaagattatatacatcatttaatgaatgaatctaaaatgt-taatttttgcttataatagtga 331931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 4181945 - 4182039
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||  || |||| ||||||| | ||||| |||||||||||| || |||| || | ||||||||||||||| ||||||| || ||||||    
T  4181945 tataagcaaattttaacttgttagatttattcaattaatgatgtatgtggtctataatatagatcatatacatcattgattgaataaatctaaaa 4182039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 575
Target Start/End: Complemental strand, 10872813 - 10872711
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| || |  ||||||||| | ||||| |||||||||| | || | || || |||||| |||||||||||| |||||    
T  10872813 ccctccggtcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatttaatgaat 10872714  T
Q  573 gaa 575  Q
    |||    
T  10872713 gaa 10872711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 21217170 - 21217299
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  || ||||||||| | ||| |||||||||||||  |||||| ||||| |  | |||||||||||| |||||  | |    
T  21217170 cggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatatatc 21217269  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||   | ||||||||||||||||||    
T  21217270 taaaacgt-tgatttttgcttataatagtga 21217299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 558
Target Start/End: Original strand, 22152724 - 22152798
Alignment:
Q  484 attattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatac 558  Q
    ||||||||||| |||| || |  ||||| ||| | ||||||||||||||||||||| |||||| | |||||||||    
T  22152724 attattataagtaaaaattcaaattttatattcattcaataaatgatgtatgtagtatatatatagatcatatac 22152798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 608
Target Start/End: Complemental strand, 43599162 - 43599105
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||| ||||||||||||  ||||||| |||||| | |||||||||||||||||||||||    
T  43599162 atcacatacatcatttaaggaatgaatctaaaatg-caaaattttgcttataatagtga 43599105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 2128495 - 2128430
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    |||| |||||||||||||| || |  ||||||||| | |||||||||||||||||| || ||||||    
T  2128495 gtcactattataagcaaaaattcatgttttagattcattcaataaatgatgtatgtggtctatata 2128430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 610
Target Start/End: Complemental strand, 7601975 - 7601919
Alignment:
Q  553 atatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||||||| |||| |||||||||| ||||||  ||||| ||||||||||||||||||||    
T  7601975 atatacaccattaattgaatgaatctaaaat-tcaaagttttgcttataatagtgatc 7601919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 26121680 - 26121571
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| ||||||| | |||| ||  | ||||||||| | ||| |||||||||||||| || |||| || | | ||||||||||||| |||||||    
T  26121680 ccctccggtcactattatagggaaaattttgcattttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaat 26121581  T
Q  573 gaacctaaaa 582  Q
    ||| ||||||    
T  26121580 gaatctaaaa 26121571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 582
Target Start/End: Complemental strand, 27224709 - 27224612
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||| ||  | ||||||||||| ||| |||||||||||| || ||| || || | |||| |||||||||||| ||||| || ||||||    
T  27224709 tattataagcaaaaattagcattttagattgattcattaaatgatgtatataatttttattatagatcacatacatcatttaatgaataaatctaaaa 27224612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 544
Target Start/End: Original strand, 48191719 - 48191784
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata 544  Q
    |||||| |||||||| ||||| || || ||||||||| | ||| |||||||||||||| |||||||    
T  48191719 cggtcactattataaacaaaaattaacattttagattcattcattaaatgatgtatgtggtttata 48191784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 582
Target Start/End: Complemental strand, 50466902 - 50466845
Alignment:
Q  525 aatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||| ||||| || |||||| | ||||||||||||||| |||||||||| ||||||    
T  50466902 aatgatatatgtggtctatataaagatcatatacatcattaattgaatgaatctaaaa 50466845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 589
Target Start/End: Complemental strand, 51760259 - 51760194
Alignment:
Q  525 aatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaa 589  Q
    |||||||||||| ||| ||| ||  ||||| |||||||||| ||||||||||||||||| ||||||    
T  51760259 aatgatgtatgtggttcataatatgaatcacatacatcattaattgaatgaacctaaaaagtcaaa 51760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 331939 - 331879
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    |||| |||||| |||||||||||||| || || ||||||||| | ||| ||||||||||||    
T  331939 ccctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 331879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 1043967 - 1044031
Alignment:
Q  519 tcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||| |||||||||||||| ||||| || | |||| |||||||||| ||| |||||||||||||    
T  1043967 tcaattaatgatgtatgtagcttataatatagatcacatacatcattaattaaatgaacctaaaa 1044031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 1086553 - 1086617
Alignment:
Q  519 tcaataaatgatgtatgtagtttatatacaa-atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||||||| || ||||||  | | ||| |||||||||||||||||||| ||||||    
T  1086553 tcaataaatgatgtatgtggtatatataatagaccatgtacatcatttattgaatgaatctaaaa 1086617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 564
Target Start/End: Complemental strand, 34327650 - 34327558
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatt 564  Q
    ||||| || |||||||||||| ||||| || || ||||||||| | ||| |||||||||||| |  ||||| ||  |||||||||||||||||    
T  34327650 tccctccgatcattattataaacaaaaattaacattttagattcattcattaaatgatgtatatgatttataatcaaaatcatatacatcatt 34327558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 556 - 608
Target Start/End: Original strand, 36566717 - 36566768
Alignment:
Q  556 tacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||||||||||| |||||| |  ||| ||||||||||||||||||    
T  36566717 tacatcatttattgaatgaatctaaaaag-aaaacttttgcttataatagtga 36566768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 50660078 - 50660042
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagatt 515  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  50660078 cggtccttattataagaaaaagttgactttttagatt 50660042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 52638141 - 52638065
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| | ||||| |||||||||||| ||  ||| || |||||| |||||| ||| |||||||||||||||||    
T  52638141 ttttagattcattcaattaatgatgtatgtggtcgataatataaatcacatacattattaattgaatgaacctaaaa 52638065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 486 - 609
Target Start/End: Complemental strand, 8169225 - 8169103
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||| | | || |||||||||||||||||||||||||||| |     
T  8169225 tattataagcaaaagttaactttttagattcattcaataaatgatgtatgtagtctatatatagaccacatacatcatttattgaatgaacctaaaaag- 8169127  T
Q  586 caaaattttgcttataatagtgat 609  Q
    | || |||||||||||||| ||||    
T  8169126 ccaacttttgcttataataatgat 8169103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 478 - 608
Target Start/End: Complemental strand, 11602904 - 11602775
Alignment:
Q  478 tcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacc 577  Q
    ||||||| |||||||| |||||||| |||||||||||| | ||||||||||||||||||||| |||||| |  ||| |||||| ||||| ||||||||||    
T  11602904 tcggtcactattataaacaaaagttcactttttagattcattcaataaatgatgtatgtagtctatatatagttcacatacataatttaatgaatgaacc 11602805  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    |||||  || || |||| |||||||||||||    
T  11602804 taaaaaatc-aacttttacttataatagtga 11602775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 606
Target Start/End: Original strand, 8169104 - 8169227
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaa 581  Q
    |||||||||||||||||||||| |||||||| || | |||||||||||||||||| || |||||| | |  | ||||||||||||||||||||| |||||    
T  8169104 tcattattataagcaaaagttggctttttaggttcattcaataaatgatgtatgtggtctatatatagactacatacatcatttattgaatgaatctaaa 8169203  T
Q  582 acgtcaaaattttgcttataatagt 606  Q
    | ||  || ||||||||||||||||    
T  8169204 aagt-taacttttgcttataatagt 8169227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 23797347 - 23797481
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    ||||||||||| |||||||||||||| ||  | ||||||||| | ||| ||||||||||||||||| ||| ||| | | || |||||||||| |||||||    
T  23797347 cccttcggtcactattataagcaaaattttgcattttagattcattcattaaatgatgtatgtagtctataataaagaccagatacatcattaattgaat 23797446  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| |||||| | ||||||||| |||||||||||||    
T  23797447 gaatctaaaatg-caaaattttacttataatagtga 23797481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 475 - 608
Target Start/End: Original strand, 37491273 - 37491406
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatg 573  Q
    |||| ||||| |||||||||||||| || |||||||||||| | | ||||||||||||||||||| ||||| |   | ||||||||||||||||| ||||    
T  37491273 cctttggtcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatg 37491372  T
Q  574 aacctaaaacgtcaaaattttgcttataatagtga 608  Q
    || |||||| || ||| ||||| ||||||||||||    
T  37491373 aatctaaaaagt-aaacttttgattataatagtga 37491406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 582
Target Start/End: Complemental strand, 21099377 - 21099276
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||| ||||||||| ||||||| |||||||| ||| | ||||||||||| ||||||||| |||||| | | ||  |||||||||||||||||||||||||    
T  21099377 gtcactattataagtaaaagttcactttttatattcattcaataaatgacgtatgtagtctatatatagaccacttacatcatttattgaatgaacctaa 21099278  T
Q  581 aa 582  Q
    ||    
T  21099277 aa 21099276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 473 - 546
Target Start/End: Original strand, 34840612 - 34840685
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    ||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||| | ||||||    
T  34840612 tccctccggtcattattataagcaaaagttcactttttagattcattcaataaatgatgtatgtaatatatata 34840685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 581
Target Start/End: Complemental strand, 30457859 - 30457764
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaa 581  Q
    ||||||||| ||||||| |||||||| ||| | |||||||||| ||||||| || |||||| | |||| |||||||||||||||||||||| ||||    
T  30457859 tattataagtaaaagttcactttttaaattcattcaataaatgttgtatgttgtctatatatagatcacatacatcatttattgaatgaacttaaa 30457764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 504 - 593
Target Start/End: Complemental strand, 27163276 - 27163186
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||||||||| ||| |||||||||||||||| ||||||| || | | || |||||||||||||| ||||||||||||| ||||||||||    
T  27163276 actttttagattcactaaataaatgatgtatgtggtttataatatagaccacatacatcatttattcaatgaacctaaaaagtcaaaattt 27163186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 580
Target Start/End: Original strand, 32599681 - 32599768
Alignment:
Q  493 agcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||| |||||| | | || | |||||||||| |||||||||||||    
T  32599681 agcaaaagttagctttttagattcattcaataaatgatgtatgtagtctatatatagaccacaaacatcatttaatgaatgaacctaa 32599768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 620
Target Start/End: Original strand, 38940218 - 38940364
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||| | ||||||||| ||| |||| || |||||| | |  | |||||||||||||| |||    
T  38940218 tccctccggtcattattataagcaaaaattgacattttagattcattcaataaataatgaatgtggtctatatatagactacatacatcatttattaaat 38940317  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagta 620  Q
    |||  ||||| ||  || ||||  |||||||||| ||| |||||||||    
T  38940318 gaatttaaaaagt-gaatttttaattataatagtaatcgaagggagta 38940364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 9555396 - 9555267
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    ||||||||||||||||||||| || || ||||||||| | ||| |||||||||||||| |||||| ||| | |  |||||||||||| ||||||| ||      
T  9555396 cggtcattattataagcaaaactttacattttagattcattcattaaatgatgtatgtggtttatgataaagactatatacatcattaattgaataaatt 9555297  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||| || |||||||| ||||| |||||||    
T  9555296 taaaatgt-aaaattttacttatgatagtga 9555267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 604
Target Start/End: Complemental strand, 38940361 - 38940231
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    |||||||| | | ||||||||  |||| || |||||||| ||| | | ||||||||||||||||||| |||||| | | || || ||| |||||||||||    
T  38940361 tcccttcgattactattataattaaaaattcactttttaaattcatttaataaatgatgtatgtagtctatatatagaccacattcattatttattgaat 38940262  T
Q  573 gaacctaaaacgtcaaaattttgcttataata 604  Q
    ||| |||||| ||| || ||||||||||||||    
T  38940261 gaatctaaaatgtc-aatttttgcttataata 38940231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 580
Target Start/End: Original strand, 43813124 - 43813231
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| || | |||||||||| | ||||||||||| ||||||||| ||| |||   | || ||||||||||||||||||    
T  43813124 ccctccggtcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaat 43813223  T
Q  573 gaacctaa 580  Q
    ||| ||||    
T  43813224 gaatctaa 43813231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 35160764 - 35160874
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||||| |||||||||||| ||| |||| | | | || |||||||||| ||||||||||||||||| |||     
T  35160764 tataagcaaaa-ttgactttttaggttcattcaattaatgatgtatgtggttcatattatagaccaaatacatcattcattgaatgaacctaaaaagtc- 35160861  T
Q  588 aaattttgcttata 601  Q
     |||||||||||||    
T  35160862 -aattttgcttata 35160874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 593
Target Start/End: Original strand, 31549808 - 31549911
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| || || | ||||| |||||||||||| |||||||| | ||| || |||||||||| ||||||||||||||||| ||||    
T  31549808 tataagcaaattttgactttt-aggttcattcaatcaatgatgtatgtggtttatattataaaccacatacatcattgattgaatgaacctaaaa-gtca 31549905  T
Q  588 aaattt 593  Q
    ||||||    
T  31549906 aaattt 31549911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 593
Target Start/End: Complemental strand, 31549918 - 31549815
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| || || | ||||| |||||||||||| ||||||| || ||| || |||||||||| ||||||||||||||||| ||||    
T  31549918 tataagcaaattttgactttt-aggttcattcaatcaatgatgtatgtggtttataatataaaccacatacatcattgattgaatgaacctaaaa-gtca 31549821  T
Q  588 aaattt 593  Q
    ||||||    
T  31549820 aaattt 31549815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 593
Target Start/End: Original strand, 40211167 - 40211270
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| ||||| | ||||| |||||||||||| ||||||| || | |||| ||||||| || ||||||||||||||||| ||||    
T  40211167 tataagcaaattttgactttt-agattcattcaatcaatgatgtatgtggtttatattatagatcacatacatctttgattgaatgaacctaaaa-gtca 40211264  T
Q  588 aaattt 593  Q
    ||||||    
T  40211265 aaattt 40211270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 622
Target Start/End: Complemental strand, 37491407 - 37491266
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagt---ttatatacaaatcatatacatcatttattgaatgaacc 577  Q
    |||| |||||||| |||||||| |||||||||||| | | |||||||||||||| | ||   ||||||| |   ||||  ||||||||||| ||| || |    
T  37491407 gtcactattataatcaaaagtttactttttagattcatttaataaatgatgtatatggtcacttatatagactacata--catcatttatttaataaatc 37491310  T
Q  578 taaaacgtcaaaattttgcttataatagtgatcaaagggagtatt 622  Q
    ||||| || ||| |||||||||||||||||| |||||| ||||||    
T  37491309 taaaaagt-aaatttttgcttataatagtgaccaaaggaagtatt 37491266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 4027233 - 4027326
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||| |||| |||||||||| | ||| | |||||||||||| || ||||| |  |||||||||||||||| | |||||||||||||||    
T  4027233 tataagcaaaa-ttgagtttttagattcattcatttaatgatgtatgttgtctatattatgaatcatatacatcattaaatgaatgaacctaaaa 4027326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 583
Target Start/End: Original strand, 22752563 - 22752669
Alignment:
Q  478 tcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaac 576  Q
    |||||||| | ||||||||||| || |  ||||||||| | ||||||||| |||||| |  |||||| || |||||| |||||| ||||||||||||||     
T  22752563 tcggtcataaatataagcaaaaatttatattttagattcattcaataaataatgtatattatttataataaaaatcacatacataatttattgaatgaat 22752662  T
Q  577 ctaaaac 583  Q
    |||||||    
T  22752663 ctaaaac 22752669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 621
Target Start/End: Complemental strand, 23797407 - 23797342
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||||||||||| | ||||| ||||    
T  23797407 atacatcatttaatgaatgaatctaaaatg-caaaattttgcttataatagtgaccgaagggtgtat 23797342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 488 - 582
Target Start/End: Complemental strand, 32599789 - 32599695
Alignment:
Q  488 ttataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||||||||| || |||| || | ||| |||||||||| ||| || |||||| | |  | ||||||||||||||||||||| ||||||    
T  32599789 ttataagcaaaagttgatttgttaggttcattcattaaatgatgtttgtggtctatatatagactacatacatcatttattgaatgaatctaaaa 32599695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 601
Target Start/End: Complemental strand, 35160874 - 35160764
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||||| |||||||||| | || |||| ||  || || |||||||||| ||||||||||||||||| |||     
T  35160874 tataagcaaaa-ttgactttttaggttcattcaatgaatgatgtatttggtctataatatgaaccacatacatcattaattgaatgaacctaaaaagtc- 35160777  T
Q  588 aaattttgcttata 601  Q
     |||||||||||||    
T  35160776 -aattttgcttata 35160764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 47535051 - 47535117
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||||||||||||||||||| |||||| || |   ||||||||||||||||||||  |||||||||    
T  47535051 atacatcatttattgaatgaatctaaaaggttatttttttgcttataatagtgatcggagggagtat 47535117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 607
Target Start/End: Original strand, 7701192 - 7701320
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  || ||||||||| | ||| |||||||||||||  |||||| ||||| |  | |||||||||||| |||||| | |    
T  7701192 cggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 7701291  T
Q  578 taaaacgtcaaaattttgcttataatagtg 607  Q
    ||||||||   | |||||||||||||||||    
T  7701292 taaaacgt-tgatttttgcttataatagtg 7701320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 604
Target Start/End: Original strand, 21387581 - 21387705
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| || ||||||||||| |  | ||| |||||| | ||||| ||||||||||||||| | ||| | | | || |||||||||||||| |||||| ||    
T  21387581 ggtcactaatataagcaaaaatccattttctagattcattcaattaatgatgtatgtagtctttattatataccacatacatcatttattaaatgaatct 21387680  T
Q  579 aaaacgtcaaaattttgcttataata 604  Q
    |||| || ||||||||||||||||||    
T  21387681 aaaaagt-aaaattttgcttataata 21387705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 18091331 - 18091267
Alignment:
Q  519 tcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||| ||||| || ||||| ||| |||| |||||||||||||||||| |||||||||    
T  18091331 tcaataaatgatttatgtggtatatattacagatcacatacatcatttattgaataaacctaaaa 18091267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 610
Target Start/End: Original strand, 34840749 - 34840796
Alignment:
Q  562 atttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  34840749 atttattgaatgaacctaaaatgtc-aacttttgcttataatagtgatc 34840796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 593
Target Start/End: Complemental strand, 39970266 - 39970179
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||| ||| | ||||| |||||||||||| || |||| || ||| || |||||||||| ||||||||||||||||| ||||||||||    
T  39970266 tttttaaattcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaacctaaaa-gtcaaaattt 39970179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 593
Target Start/End: Complemental strand, 47778553 - 47778451
Alignment:
Q  490 ataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    |||||||||  ||||||||| | ||| | ||||| |||||||||||||||  ||| || |||||| |||||| ||| ||||||||||||||||| |||||    
T  47778553 ataagcaaattttgacttttaa-attcattcaattaatgatgtatgtagtcgataatataaatcacatacattattaattgaatgaacctaaaa-gtcaa 47778456  T
Q  589 aattt 593  Q
    |||||    
T  47778455 aattt 47778451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 582
Target Start/End: Original strand, 3341903 - 3341997
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||||| ||||||||||| ||| | ||||| |||||||||| | ||| |||||   |||| |||||||||| ||||||| ||| |||||    
T  3341903 attataagcaaaa-ttgactttttatattcattcaattaatgatgtatatggttcatatatggatcacatacatcattaattgaataaacttaaaa 3341997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 536
Target Start/End: Complemental strand, 21387710 - 21387655
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||| |||||||||||||| || |||||||||||| | | ||||||||||||||||    
T  21387710 gtcaatattataagcaaaattttactttttagattcatttaataaatgatgtatgt 21387655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Original strand, 24211580 - 24211659
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||| | ||||| ||| |||||||| ||| ||| ||   ||||||||||||||| |||||||||||||||||    
T  24211580 actttttagattcattcaattaataatgtatgtggttcataatatggatcatatacatcattaattgaatgaacctaaaa 24211659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 43103071 - 43103205
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| || || ||||| ||| | | | ||||||||||||| ||  |||| || |||| |||||||||||| ||| |||    
T  43103071 ccctccggtcactattataagcaaaaattaacattttaaattcatttattaaatgatgtatgcagactatattaaaaattatatacatcattaattaaat 43103170  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
     || ||||||  | |||||||| |||||||||||||    
T  43103171 aaatctaaaatat-aaaattttacttataatagtga 43103205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 621
Target Start/End: Complemental strand, 2456395 - 2456330
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    |||||||||| ||| ||||||||||||| || | | ||||||||||||||||||||  |||||||||    
T  2456395 atacatcattaattcaatgaacctaaaaagt-agatttttgcttataatagtgatcggagggagtat 2456330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 2943211 - 2943273
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||||||||| |||||||||||||| |  || ||||||||| | ||| ||||||||||||||    
T  2943211 cccttcggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgt 2943273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 601
Target Start/End: Complemental strand, 6580619 - 6580520
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgctta 599  Q
    |||||||||||| || | ||| | |||||||||||| ||  |||| |  |||||||||||||||| | ||||||||||||||| |||  |||||||||||    
T  6580619 ttgactttttaggttcattcacttaatgatgtatgtggtacatattatgaatcatatacatcattaaatgaatgaacctaaaatgtc--aattttgctta 6580522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 604
Target Start/End: Original strand, 9555264 - 9555389
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| ||| ||||| |||| || || ||||| ||| | ||||| |||||||||| |||| | ||| | ||| || |||||||||||| |||||||| |    
T  9555264 cggtcactatcataagtaaaattttacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacatacatcatttaatgaatgaatc 9555363  T
Q  578 taaaacgtcaaaattttgcttataata 604  Q
    ||||| || ||| ||||||||||||||    
T  9555364 taaaatgt-aaagttttgcttataata 9555389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 10095718 - 10095780
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||| |||||| |||||||||||||| || || ||||||||| | ||| ||||||||||||||    
T  10095718 ccctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgt 10095780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 544
Target Start/End: Original strand, 16777891 - 16777961
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata 544  Q
    |||| |||||| || |||||||||||||| | |||||||||| | | | ||||||||||||||||| ||||    
T  16777891 ccctccggtcactaatataagcaaaagtttaatttttagattcatttattaaatgatgtatgtagtctata 16777961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 608
Target Start/End: Complemental strand, 18654686 - 18654553
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagttta-tatacaaatcatatacatcatttattgaatg 573  Q
    ||||| |||| ||||||||| | ||||| | |||||||||| | | |||||||||||||| | || || |||| | | || |||||| |||||||||| |    
T  18654686 ccttctgtcactattataagtacaagtttattttttagatttatttaataaatgatgtatatggtatattatatagaccacatacattatttattgaaag 18654587  T
Q  574 aacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||| || ||| |||| |||||| ||||||    
T  18654586 aacctaaaaagt-aaactttttcttatagtagtga 18654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 545
Target Start/End: Complemental strand, 18820071 - 18820001
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat 545  Q
    |||||| ||||||||| ||| |||| || || ||||||||| | |||||||||||||||||| || |||||    
T  18820071 ccttcgatcattattacaagtaaaatttaacattttagattcattcaataaatgatgtatgttgtctatat 18820001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 19688105 - 19688207
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaaccta 579  Q
    |||| ||||||||||||||    || |||||| || | ||||||||||||||||||||||||| ||  | | || |||||||||||||| |||||| |||    
T  19688105 gtcactattataagcaaaaaaatacattttaggttcattcaataaatgatgtatgtagtttattatgtagaccacatacatcatttattaaatgaatcta 19688204  T
Q  580 aaa 582  Q
    |||    
T  19688205 aaa 19688207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 601
Target Start/End: Original strand, 30005902 - 30006001
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgctta 599  Q
    |||||||||| | || | ||||| ||||| |||||| || |||| ||  ||||| |||||||||| ||||||||||||||||| |||  |||||||||||    
T  30005902 ttgacttttttggttcattcaattaatgacgtatgtggtctataatatgaatcacatacatcattaattgaatgaacctaaaaagtc--aattttgctta 30005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 32549867 - 32549929
Alignment:
Q  521 aataaatgatgtatgtagtttatatacaa-atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||||| || |||||  || |||| ||||||||||||||||||||| ||||||    
T  32549867 aataaatgatgtatgtggtctatattaaagatcacatacatcatttattgaatgaatctaaaa 32549929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 589
Target Start/End: Complemental strand, 46578376 - 46578290
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacgtcaaa 589  Q
    ||||||||| || | ||||| |||||||||||||||| || ||| ||| || |||||||||| ||||||||||  ||||| ||||||    
T  46578376 actttttaggttcattcaattaatgatgtatgtagttcataatataaaccacatacatcattaattgaatgaatttaaaaagtcaaa 46578290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 603
Target Start/End: Complemental strand, 1741944 - 1741893
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataat 603  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  1741944 atcacatacatcattaattgaatgaacctaaaa-gtcaaaa-tttgcttataat 1741893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 582
Target Start/End: Original strand, 18654545 - 18654654
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaa-atcatatacatcatttattgaat 572  Q
    |||| |||||| || |||||| ||||||| ||||||||| ||   ||||||||| |||||||| || ||||||  | | ||||||||||||||||| |||    
T  18654545 ccctccggtcactactataagaaaaagtttactttttaggttctttcaataaataatgtatgtggtctatataatataccatatacatcatttattaaat 18654644  T
Q  573 gaacctaaaa 582  Q
     || ||||||    
T  18654645 aaatctaaaa 18654654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 593
Target Start/End: Original strand, 27163191 - 27163284
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||||||||| || | | |||||||||||||||| || |||| || ||| || |||||||||||||| | |||| |||||| || |||||||    
T  27163191 ttgactttttaggttcattgaataaatgatgtatgtggtctatattataaaccacatacatcatttatttagtgaatctaaaaagtgaaaattt 27163284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 583
Target Start/End: Original strand, 31417561 - 31417626
Alignment:
Q  519 tcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaac 583  Q
    |||||||||||||||| | || || | || |||||| ||||||||||||||||||||| |||||||    
T  31417561 tcaataaatgatgtatattgtctacaataaaaatcacatacatcatttattgaatgaatctaaaac 31417626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 33471521 - 33471598
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||| | ||||| |||||||||||| ||| |||| | | | || |||||||||| |||||||||||||||||    
T  33471521 tttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacctaaaa 33471598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 785688 - 785585
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| ||||||||| |||| || || |||||  || | |||||||||||| |||||||| || | || ||| ||||||||||| |||||||||||||     
T  785688 cggtcactattataaggaaaaattcacattttacgttcattcaataaatgatatatgtagtctacattataaaccatatacatca-ttattgaatgaaca 785590  T
Q  578 taaaa 582  Q
    |||||    
T  785589 taaaa 785585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 3838227 - 3838151
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| | ||||| ||| |||||| | || |||| || |||||| |||||||||| |||||||||||||||||    
T  3838227 ttttagattcattcaatcaataatgtatttggtctataatataaatcacatacatcattgattgaatgaacctaaaa 3838151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 610
Target Start/End: Complemental strand, 6847340 - 6847281
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||||||||||||||| ||||||| ||  ||||| | |||| ||||||||||||||||||||    
T  6847340 atcatatacatcattaattgaataaatataaaatg-caaatttttgcttataatagtgatc 6847281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 513
Target Start/End: Original strand, 21857067 - 21857107
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttaga 513  Q
    ||||| |||||| ||||||||||||||||| ||||||||||    
T  21857067 tccctccggtcactattataagcaaaagtttactttttaga 21857107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 507 - 582
Target Start/End: Complemental strand, 22752668 - 22752592
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| | ||||||||| ||||||||  ||| ||| | |||| |||||||| |||||||||||||| ||||||    
T  22752668 ttttagattcattcaataaattatgtatgtgatttttattataaataatatacattatttattgaatgaatctaaaa 22752592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 27942421 - 27942357
Alignment:
Q  519 tcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||| |||||||||||| ||||||| ||   ||||||||||||||| |||||||||| ||||||    
T  27942421 tcaattaatgatgtatgtggtttataatatggatcatatacatcattaattgaatgaatctaaaa 27942357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 28229044 - 28228993
Alignment:
Q  558 catcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||||||||||| |||||| |||||| || ||| ||||||||||||||||||||    
T  28229044 catcatttattaaatgaagctaaaatgttaaa-ttttgcttataatagtgatc 28228993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 31319625 - 31319549
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaa 581  Q
    |||||||||| | |||| |||||||||||||||| ||| ||| | | || ||| |||||| ||||||||||||||||    
T  31319625 tttttagattcattcaaaaaatgatgtatgtagtctataataaagaccacatatatcattaattgaatgaacctaaa 31319549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 552 - 608
Target Start/End: Complemental strand, 31813473 - 31813418
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||||| |||||||||| |||||| || ||| ||||| ||||||||||||    
T  31813473 catatacatcattaattgaatgaatctaaaatgt-aaatttttgtttataatagtga 31813418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 34840790 - 34840730
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    |||||||||||||||||||| |||||| || | ||||||||| || ||||| || ||||||    
T  34840790 tattataagcaaaagttgacattttaggttcattcaataaataatctatgtggtctatata 34840730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 41395806 - 41395766
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagatt 515  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  41395806 ccttcggttcttattataagaaaaagttgactttttagatt 41395766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 487 - 608
Target Start/End: Original strand, 16667076 - 16667196
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtc 586  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||| | | | || |||||||||||||||||||||| ||||| |||    
T  16667076 attataaacaaaagttaactttttagattgattcaataaatgatgtatgtaatttataaatagaccacatacatcatttattgaatgaacgtaaaatgtc 16667175  T
Q  587 aaaattttgcttataatagtga 608  Q
     || |||| |||||||||||||    
T  16667176 -aacttttacttataatagtga 16667196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 480 - 621
Target Start/End: Complemental strand, 37255816 - 37255676
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| ||||||||||||||||| |||||||| ||| | ||||||||| |||||||||||||||||| | | || ||||||||||||||||||||| |||    
T  37255816 ggtcactattataagcaaaagttcactttttaaattcattcaataaattatgtatgtagtttatatatagaccacatacatcatttattgaatgaatcta 37255717  T
Q  580 aaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    |||   | || ||||||||||||||||||   ||||||||||    
T  37255716 aaa-aaccaacttttgcttataatagtgacagaagggagtat 37255676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 473 - 624
Target Start/End: Original strand, 11796583 - 11796733
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    |||| ||||||| ||||||||||||||||||||||||| |||| | ||||| |||||| ||||| ||||||||| | || | ||||||||||||||||||    
T  11796583 tcccatcggtcactattataagcaaaagttgactttttcgattcattcaatgaatgatatatgtggtttatatatagattacatacatcatttattgaat 11796682  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtattta 624  Q
     || |||||| ||  || |||||||||||||||||  | |||| ||||||||    
T  11796683 aaatctaaaaagt-gaatttttgcttataatagtggccgaaggaagtattta 11796733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 475 - 621
Target Start/End: Complemental strand, 11796724 - 11796579
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatga 574  Q
    ||||||| || |||||||||||||| || |||||||||||| | ||||||||||||||||||| | |||||| ||| || ||| |||||| |||||||||    
T  11796724 ccttcggccactattataagcaaaaattcactttttagatttattcaataaatgatgtatgtaatctatatataaaccacatatatcattcattgaatga 11796625  T
Q  575 acctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    | | |||| ||| || |||||||||||||||||| | | ||||||||    
T  11796624 atcgaaaaagtc-aacttttgcttataatagtgaccgatgggagtat 11796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 489 - 610
Target Start/End: Original strand, 5535728 - 5535848
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    |||||||||||  | | |||||||||| | |||||||||||||||||||||||||||| | | || |||||||| ||||||||||||||||| | ||| |    
T  5535728 tataagcaaaaactcattttttagattcattcaataaatgatgtatgtagtttatatatagaccacatacatcagttattgaatgaacctaacaagtc-a 5535826  T
Q  589 aattttgcttataatagtgatc 610  Q
    | ||||||||||||||||||||    
T  5535827 atttttgcttataatagtgatc 5535848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 473 - 621
Target Start/End: Original strand, 37255680 - 37255827
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||||| |||| ||||||||||||||||||  |||||||||| | |||||||||||||||||| || |||||| |||  | |||||| |||||||||||    
T  37255680 tcccttctgtcactattataagcaaaagttggttttttagattcattcaataaatgatgtatgtggtctatatataaactacatacataatttattgaat 37255779  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    |||  ||||| ||  || |||||||||||||||||| || | |||||||    
T  37255780 gaatttaaaaagt-gaacttttgcttataatagtgaccagaaggagtat 37255827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 473 - 608
Target Start/End: Original strand, 44171432 - 44171564
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||| |||||||||| |||||||| | |||||| ||| | ||||||||||||||||||| | |||||| ||| ||||||||||||||| |||||    
T  44171432 tccctccggttattattataaacaaaagttaattttttaaattcattcaataaatgatgtatgtaatctatatataaa-catatacatcatttaatgaat 44171530  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||  || || ||||||||||||||||||    
T  44171531 gaacctaaaa-atc-aacttttgcttataatagtga 44171564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 582
Target Start/End: Original strand, 22020121 - 22020223
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| ||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||| ||  | |||| | |||||||||||| ||||||||||    
T  22020121 ggtcactattataagcaaaagttcactttttagattcattcaataaatgatatatgtagtttacatgtagatcacacacatcatttattaaatgaaccta 22020220  T
Q  580 aaa 582  Q
    |||    
T  22020221 aaa 22020223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 492 - 608
Target Start/End: Complemental strand, 4386445 - 4386330
Alignment:
Q  492 aagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaat 591  Q
    ||||||||||| |||||||||||| | |||||||||||| ||||||||||||||| | | || |||||||||||| | ||| || |||||| ||| || |    
T  4386445 aagcaaaagtttactttttagattcattcaataaatgatctatgtagtttatatatagaccacatacatcatttaataaattaatctaaaaagtc-aact 4386347  T
Q  592 tttgcttataatagtga 608  Q
    |||||||||||||||||    
T  4386346 tttgcttataatagtga 4386330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 473 - 608
Target Start/End: Complemental strand, 3094408 - 3094274
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||| |||||||| |||||||||||||||||| || | ||||||||||| ||||||||| ||||   | | |||||||||||||||||||||    
T  3094408 tccctccggtcactattataaccaaaagttgactttttaggttcattcaataaatgacgtatgtagtctatacgtagaccatatacatcatttattgaat 3094309  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||  |||||  | ||| ||||| ||||||||||||    
T  3094308 gaatataaaaaat-aaatttttgtttataatagtga 3094274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 4386329 - 4386430
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||| |||||||||||||||||||||||||||||| | | | |||||||||||||| || |||||| |||  | ||| ||||||||||||||||| ||||    
T  4386329 gtcactattataagcaaaagttgactttttagattaatttattaaatgatgtatgtggtctatatataaactacatagatcatttattgaatgaatctaa 4386428  T
Q  581 aa 582  Q
    ||    
T  4386429 aa 4386430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 3740444 - 3740341
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| || |||||||||||||||||||||||| || | ||||||||||||| ||||||| |||||| | | || |||||||||||||| ||| ||| |    
T  3740444 cggtcactaatataagcaaaagttgactttttaggttcattcaataaatgatgcatgtagtctatatatagaccagatacatcatttatttaataaactt 3740345  T
Q  579 aaaa 582  Q
    ||||    
T  3740344 aaaa 3740341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 621
Target Start/End: Complemental strand, 5535842 - 5535708
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    |||||||||||||| ||||||| |||| || | ||||||| |||||||||| || |||||| |||  | ||||||||||||||||||||| ||||||  |    
T  5535842 tattataagcaaaaattgacttgttaggttcattcaataactgatgtatgtggtctatatataaactacatacatcatttattgaatgaatctaaaaaat 5535743  T
Q  586 caaaattttgcttataatagtgatcaaagggagtat 621  Q
      |  ||||||||||| ||||||||| |||||||||    
T  5535742 -gagtttttgcttatactagtgatcagagggagtat 5535708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 475 - 582
Target Start/End: Complemental strand, 16667203 - 16667096
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatga 574  Q
    |||||||||| ||||||||| |||||||||| |||||  || | |||||||||||||||||| || ||| || |||| | |||||||||||||||||| |    
T  16667203 ccttcggtcactattataagtaaaagttgacattttacgttcattcaataaatgatgtatgtggtctatttataaattacatacatcatttattgaatca 16667104  T
Q  575 acctaaaa 582  Q
    | ||||||    
T  16667103 atctaaaa 16667096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 474 - 610
Target Start/End: Complemental strand, 3511850 - 3511714
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| ||||||||||||||||||||| ||  | ||||| ||| | ||| ||||||||| |||| || |||| || | ||||||||||||||| |||||||    
T  3511850 ccctccggtcattattataagcaaaactttgcattttaaatttattcattaaatgatgaatgtggtctataataaagatcatatacatcattaattgaat 3511751  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||| |||||| || ||| ||||||||||| ||||||||    
T  3511750 gaatctaaaatgt-aaagttttgcttatattagtgatc 3511714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 504 - 618
Target Start/End: Complemental strand, 41459525 - 41459411
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataa 602  Q
    |||||||||||| | |||||||||||| ||||||||||| | || | |||  ||||||||||||||||||||| ||||||  |||||| |||| ||||||    
T  41459525 actttttagattcattcaataaatgatttatgtagtttacaatatatatctcatacatcatttattgaatgaatctaaaaaatcaaaa-tttgtttataa 41459427  T
Q  603 tagtgatcaaagggag 618  Q
    |||| ||| |||||||    
T  41459426 tagtcatcgaagggag 41459411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 474 - 610
Target Start/End: Original strand, 19934637 - 19934773
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| |  |||||||||||| | |||||||||||||||||| || ||| | |   | || ||||||||||||||||||    
T  19934637 ccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaat 19934736  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||| ||||||  | | | ||||||||||||||||||||    
T  19934737 gaatctaaaaaat-agatttttgcttataatagtgatc 19934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 20215693 - 20215574
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||| |||| ||||||||||||||  ||||||||| | |||||||||||||||| |||       | | | || ||||||||||||||||||||||||||    
T  20215693 gtcactattttaagcaaaagttgatattttagattcattcaataaatgatgtatctag-------aaagaccacatacatcatttattgaatgaacctaa 20215601  T
Q  581 aacgtcaaaattttgcttataatagtga 608  Q
    || ||| || ||||||||||||||||||    
T  20215600 aatgtc-aatttttgcttataatagtga 20215574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 36072704 - 36072577
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaaccta 579  Q
    |||| ||||||||| |||| ||  | ||||| ||| | ||| ||||||||||||||||| |||| || | | ||||||||||||  |||||||||| |||    
T  36072704 gtcactattataagtaaaactttgcattttaaattcattcattaaatgatgtatgtagtctataataaagaccatatacatcataaattgaatgaatcta 36072605  T
Q  580 aaacgtcaaaattttgcttataatagtga 608  Q
    ||| | |||||||||||||||||||||||    
T  36072604 aaatg-caaaattttgcttataatagtga 36072577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 567
Target Start/End: Complemental strand, 2865106 - 2865015
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttat 567  Q
    ||||||||||||||||| ||||| || || ||||||||| | ||| |||||||||||| |||||| || || | ||||||||||||||||||    
T  2865106 ttcggtcattattataaacaaaaattaacattttagattaattcattaaatgatgtatatagtttttattatagatcatatacatcatttat 2865015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 539
Target Start/End: Complemental strand, 46518559 - 46518496
Alignment:
Q  476 cttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagt 539  Q
    |||||||||||||||||||||||| || ||||||||| || | |||||||||||||||| ||||    
T  46518559 cttcggtcattattataagcaaaaattaactttttaggtttattcaataaatgatgtatttagt 46518496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 54164812 - 54164946
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| |  |||||||||||| | |||||||||||||||||| || ||| | |   | || ||||||||||||||||||    
T  54164812 ccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaat 54164911  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| ||||||  | | | ||||||||||||||||||    
T  54164912 gaatctaaaaaat-agatttttgcttataatagtga 54164946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 608
Target Start/End: Complemental strand, 54164954 - 54164820
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagttta-tatacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| |  | |||||||||| | |||||||||||||||||| ||  | || | | | || ||||||||||||||||||    
T  54164954 ccctccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaat 54164855  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| |||||| ||   ||||||||||||||||||||    
T  54164854 gaatctaaaaagt-ggaattttgcttataatagtga 54164820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 534
Target Start/End: Original strand, 2401045 - 2401099
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    ||||||||||||||||||||||| |||||||| ||| | ||||||||||||||||    
T  2401045 ggtcattattataagcaaaagttaactttttaaattcattcaataaatgatgtat 2401099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 546
Target Start/End: Original strand, 15659940 - 15660006
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    ||||| ||||| ||||||||||| ||||||||| || | ||||||||||||||||||||| ||||||    
T  15659940 ggtcactattacaagcaaaagttcactttttaggttcattcaataaatgatgtatgtagtctatata 15660006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 604
Target Start/End: Complemental strand, 20814665 - 20814540
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaa-atcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||| ||||  |  |||||||||||| | ||||||||||||| |||| || || ||   | |||| || ||||||||||||||||||||    
T  20814665 cggtcactattataaacaaatttctactttttagattcattcaataaatgatgcatgtggtctagattgtagatcacatgcatcatttattgaatgaacc 20814566  T
Q  578 taaaacgtcaaaattttgcttataata 604  Q
    ||||| ||||||| |||||||||||||    
T  20814565 taaaaagtcaaaa-tttgcttataata 20814540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 29006971 - 29006842
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  |||||||| ||| | |||||||||||||||||| || ||| | |   |||| ||||||||||||||||||||| |    
T  29006971 cggtcactattataagcaaaattccactttttaaattcattcaataaatgatgtatgtggtctatttaatggatcacatacatcatttattgaatgaatc 29006872  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    |||||  | | | ||||||||||||||||||    
T  29006871 taaaaaat-agatttttgcttataatagtga 29006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 38381980 - 38382109
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| || || ||||||||| | | | |||||||||||||| |||||| ||||| |  | |||||||||||| |||||| | |    
T  38381980 cggtcactattataagcaaaaatttacattttagattcattgattaaatgatgtatgtggtttataatacagactacatacatcatttaatgaatgtatc 38382079  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||   | ||||||||||||||||||    
T  38382080 taaaacgt-tgatttttgcttataatagtga 38382109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 575
Target Start/End: Complemental strand, 44171565 - 44171473
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaa 575  Q
    |||| ||||||||||||||||||| ||||||| || | ||| |||||||||||| | ||||||||| | || | |||||||||||||||||||||    
T  44171565 gtcactattataagcaaaagttga-tttttaggttcattcattaaatgatgtatat-gtttatatatagattacatacatcatttattgaatgaa 44171473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 608
Target Start/End: Complemental strand, 38382111 - 38381983
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| |  || ||||||||  | ||| ||||||||||||||||| | || || ||| || |||||||||||| | |||||| ||    
T  38382111 ggtcactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccacatacatcatttaatcaatgaatct 38382012  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    |||| || ||| ||||||||||||||||||    
T  38382011 aaaatgt-aaatttttgcttataatagtga 38381983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 610
Target Start/End: Complemental strand, 40814810 - 40814673
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    ||||||||||| | |||||| ||||| || || ||||||||| | ||| |||||||| ||||| |||||| ||| | |||||||| ||||||  ||||||    
T  40814810 cccttcggtcactgttataaacaaaaattaacattttagattcattcattaaatgatatatgtggtttataataaagatcatatatatcattagttgaat 40814711  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||| ||||||  | || |||||  ||||||||||||||    
T  40814710 gaatctaaaatattaatattttaattataatagtgatc 40814673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 54106489 - 54106601
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| || |  ||||||||| | |||||||||||||||||| || || | || | |||| ||||||||||||||||||||| ||||||| | |    
T  54106489 tataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtctacaataaagatcacatacatcatttattgaatgaatctaaaacat-a 54106587  T
Q  588 aaattttgcttata 601  Q
    || |||||||||||    
T  54106588 aatttttgcttata 54106601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 582
Target Start/End: Complemental strand, 2254082 - 2253986
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||| |||||||| | |||||| ||| | |||||||||||| |||||||| |||||| | | || |||||||||||| ||||| || ||||||    
T  2254082 tattataaacaaaagtttattttttaaattcattcaataaatgatatatgtagtctatatatagaccacatacatcatttaatgaataaatctaaaa 2253986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 535
Target Start/End: Complemental strand, 28815923 - 28815863
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatg 535  Q
    |||||||||| ||||||||||||||||||||||||||| || | | |||||||||| ||||    
T  28815923 ccttcggtcactattataagcaaaagttgactttttaggttcatttaataaatgatatatg 28815863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 608
Target Start/End: Complemental strand, 19934767 - 19934645
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacg 584  Q
    |||||||||||||| |  | |||||||||| | |||||||||||||||||| ||  || | | | | || ||||||||||||||||||||| |||||| |    
T  19934767 tattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaaag 19934668  T
Q  585 tcaaaattttgcttataatagtga 608  Q
    |   ||||||||||||||||||||    
T  19934667 t-ggaattttgcttataatagtga 19934645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 28702060 - 28702194
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| || ||||||||||||||   |||||||||| | ||| ||||||||||||||||| | || || | |  | |||| ||||||| |||||    
T  28702060 ccctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtctttattatagactacatacgtcatttaatgaat 28702159  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||  ||||| ||||||||||| ||||||    
T  28702160 gaacctaaaa-atcaaacttttgcttatattagtga 28702194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 610
Target Start/End: Original strand, 34616220 - 34616350
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||| ||||| |  || ||||||||| | ||| |||||||||||||  |||||| ||||| |  |||||||||||||| |||||| | ||    
T  34616220 ggtcactattataaacaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactatatacatcatttaatgaatgtatct 34616319  T
Q  579 aaaacgtcaaaattttgcttataatagtgatc 610  Q
    |||||||   | ||||||||||||||||||||    
T  34616320 aaaacgt-tgatttttgcttataatagtgatc 34616350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 587
Target Start/End: Complemental strand, 39923945 - 39923847
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| ||||||||||||||| ||||| | |||||||||||| ||| || |||   |||| |||||||||| | ||||||||||||||| ||||    
T  39923945 tataagcaaaa-ttgactttttagattcactcatttaatgatgtatgtggttcataatatggatcacatacatcattaaatgaatgaacctaaaaagtca 39923847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 575
Target Start/End: Original strand, 2253952 - 2254054
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| || |||||||||||| ||||| || | |||||||||| | ||| |||||||||||||| || |||||| | |  | ||| ||||||||||||||    
T  2253952 tccctccgatcattattataaacaaaaattaattttttagatttattcattaaatgatgtatgtggtctatatatagactacatatatcatttattgaat 2254051  T
Q  573 gaa 575  Q
    |||    
T  2254052 gaa 2254054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 580
Target Start/End: Complemental strand, 9992698 - 9992636
Alignment:
Q  519 tcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||||||||||||||| |||| |||| ||   |||||||||||||||||||||||||||||||    
T  9992698 tcaataaatgatgtatatagtctataatattgatcatatacatcatttattgaatgaacctaa 9992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 20215566 - 20215628
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||| |||||| |||||||||||||| ||||| |||||| || | ||||||||||||||||||    
T  20215566 ccctccggtcactattataagcaaaaattgacattttaggttcattcaataaatgatgtatgt 20215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 593
Target Start/End: Complemental strand, 54787089 - 54787004
Alignment:
Q  508 tttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||||| | ||||| |||||||||||| || |||| || ||| || |||||||||| ||||||||||||||||| ||||||||||    
T  54787089 tttagattcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaacctaaaa-gtcaaaattt 54787004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 582
Target Start/End: Original strand, 2582815 - 2582916
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||||||||||||||||| |  |  ||||||||||| ||| ||||||||||||||||| ||| ||| |  ||||| |||| ||||| |||||||| ||||    
T  2582815 tcattattataagcaaaaatcaatattttagattgattcattaaatgatgtatgtagtctataataaaggtcataaacataatttaatgaatgaatctaa 2582914  T
Q  581 aa 582  Q
    ||    
T  2582915 aa 2582916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 548
Target Start/End: Complemental strand, 6087561 - 6087500
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatataca 548  Q
    ||||||||||||| || | |||| ||||| | ||||||||||||||||||||| ||||||||    
T  6087561 attataagcaaaaatttaattttcagatttattcaataaatgatgtatgtagtctatataca 6087500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 582
Target Start/End: Complemental strand, 6462841 - 6462744
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaa-atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||| ||||| || | |||||||||| | ||||||||||||||||||  | ||| ||    |||| ||||||||||||||||||||||||||||    
T  6462841 tattataaacaaaattttattttttagattcattcaataaatgatgtatgtgatctatttaatggatcacatacatcatttattgaatgaacctaaaa 6462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 546
Target Start/End: Original strand, 16912437 - 16912510
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    ||||| || ||| ||||||||| ||||||  | |||||||||| | ||||||||||||||||||||| ||||||    
T  16912437 tccctccgatcaatattataagtaaaagtgtaatttttagattcattcaataaatgatgtatgtagtctatata 16912510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 536
Target Start/End: Original strand, 20814533 - 20814590
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||||||||||||||||||  |||||||||||| || | ||||||||||||| ||||    
T  20814533 cggtcattattataagcaaattttgactttttaggttcattcaataaatgatgcatgt 20814590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 568
Target Start/End: Complemental strand, 31262729 - 31262640
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagt-ttatatacaaatcatatacatcatttatt 568  Q
    ||||| |||||||||||||| ||||| ||||||||| | || ||||||||| |||||||| ||  ||| | |||| ||||||||||||||    
T  31262729 ggtcactattataagcaaaatttgacattttagattcattcgataaatgatatatgtagtctttaatatagatcacatacatcatttatt 31262640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 39533897 - 39533788
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| ||||||||||||||||||||| |  || ||||||||| | ||| ||||||||||||||  | ||| ||| | || |||||||||||||| | |||    
T  39533897 ccctacggtcattattataagcaaaaatcaacattttagatttattcattaaatgatgtatgtgatctataataaagattatatacatcatttaataaat 39533798  T
Q  573 gaacctaaaa 582  Q
    ||| ||||||    
T  39533797 gaatctaaaa 39533788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 603
Target Start/End: Complemental strand, 46462508 - 46462392
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    |||||||||||   || ||||||||| || | | ||||||||||||||||||| | ||| | ||| ||||||||||||||||| |||||| |||||| ||    
T  46462508 attataagcaatttttcactttttaggttcattgaataaatgatgtatgtagtctttattataaaccatatacatcatttatttaatgaatctaaaaagt 46462409  T
Q  586 caaaattttgcttataat 603  Q
     ||||  |||||||||||    
T  46462408 gaaaa-gttgcttataat 46462392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 621
Target Start/End: Original strand, 3094273 - 3094412
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||| |||||||| ||||| || | |||||| ||| | |||||||||||||||| | || ||  || | |  | |||| |||||||||||||||||||||    
T  3094273 gtcactattataaacaaaaatttattttttatattcattcaataaatgatgtatatggtctacgtatagactacatacgtcatttattgaatgaacctaa 3094372  T
Q  581 aacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    || ||| || ||||| |||||||||||| |  |||||||||    
T  3094373 aaagtc-aacttttggttataatagtgaccggagggagtat 3094412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 619
Target Start/End: Complemental strand, 15659994 - 15659931
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagt 619  Q
    |||||||||||||||||||||||||||| ||  || |||||||| ||||||||| || |||||||    
T  15659994 atacatcatttattgaatgaacctaaaaagt-gaacttttgcttgtaatagtgaccagagggagt 15659931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 604
Target Start/End: Original strand, 19595512 - 19595567
Alignment:
Q  548 aaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataata 604  Q
    |||||||||| ||||||||||||||||| |||||| ||  |||||||||||||||||    
T  19595512 aaatcatatatatcatttattgaatgaatctaaaatgt-gaaattttgcttataata 19595567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 601
Target Start/End: Complemental strand, 24156275 - 24156154
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    ||||||||||||||||||||| || || ||||||||| | | | ||||||||||||||  |  || |||  || || |||||||||| | ||||||||||    
T  24156275 cggtcattattataagcaaaatttaacattttagatttatttattaaatgatgtatgtgatccataatatgaaccacatacatcattaaatgaatgaacc 24156176  T
Q  578 taaaacgtcaaaattttgcttata 601  Q
    ||||| |||  |||||||||||||    
T  24156175 taaaaagtc--aattttgcttata 24156154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 593
Target Start/End: Complemental strand, 25700566 - 25700478
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatatacaa-atcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||||||| | |||||||||||||||||| || |||||   | |||| |||||||||||| |||||||| |||||| || |||||||    
T  25700566 tttttagattcattcaataaatgatgtatgtggtctatattgtagatcacatacatcatttactgaatgaatctaaaaagtaaaaattt 25700478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 608
Target Start/End: Original strand, 3740355 - 3740441
Alignment:
Q  521 aataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||||| | || |||||| | |  | || ||||||||||||||||||||||||| ||| || ||||||||||| ||||||    
T  3740355 aataaatgatgtatctggtctatatatagactacatgcatcatttattgaatgaacctaaaaagtc-aacttttgcttatattagtga 3740441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 21587029 - 21586950
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||| | ||||||||||||||||||||| ||| ||| |   || ||||||||||||||||||  ||||||||    
T  21587029 actttttagattcattcaataaatgatgtatgtagtctataatataggacacatacatcatttattgaatttacctaaaa 21586950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 614
Target Start/End: Original strand, 31262679 - 31262733
Alignment:
Q  559 atcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaag 614  Q
    ||||||||| ||||||| |||||| |||||| |||||||||||||||||| |||||    
T  31262679 atcatttatcgaatgaatctaaaatgtcaaa-ttttgcttataatagtgaccaaag 31262733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 43635947 - 43635868
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| |||| ||||| |||||||||||||||| || |||  || || |||||||||| |||||||||| ||||||    
T  43635947 actttttaggttgattcaattaatgatgtatgtagttcataatatgaaccacatacatcattaattgaatgaatctaaaa 43635868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 582
Target Start/End: Complemental strand, 11583821 - 11583739
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||||||| | ||||| |||||||||||||||| ||| ||   | || |||||||||| |||||||||| ||||||    
T  11583821 ttgactttttagattcattcaattaatgatgtatgtagttcatattatggaccacatacatcattaattgaatgaagctaaaa 11583739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 575
Target Start/End: Original strand, 12912608 - 12912710
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    ||||||| ||||||||||||| |||| || || ||||||||| | ||| |||||||||||| | || ||| ||| ||||||||||  ||||| | |||||    
T  12912608 cccttcgatcattattataagtaaaaattaacattttagatttattcattaaatgatgtatatggtatataataaaaatcatatatgtcattaagtgaat 12912707  T
Q  573 gaa 575  Q
    |||    
T  12912708 gaa 12912710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 582
Target Start/End: Original strand, 18626720 - 18626815
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||| || |  ||||||||| | ||| |||||||||||||| |||||| ||| | ||||||| ||||||| ||||||| || ||||||    
T  18626720 tattataagcaaaaattaa--ttttagattcattcattaaatgatgtatgtggtttataataaagatcatatgcatcattaattgaataaatctaaaa 18626815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 19596064 - 19595999
Alignment:
Q  548 aaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaag 614  Q
    |||||| |||||||||||||| |||||||||||||  || || |||| ||||||||||| |||||||    
T  19596064 aaatcaaatacatcatttattaaatgaacctaaaatatc-aatttttacttataatagtaatcaaag 19595999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 621
Target Start/End: Complemental strand, 22020171 - 22020110
Alignment:
Q  559 atcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||||||||||||||| |||||| || ||  |||||||||||||||||| || |||||||||    
T  22020171 atcatttattgaatgaatctaaaaagtgaac-ttttgcttataatagtgaccagagggagtat 22020110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 554 - 604
Target Start/End: Original strand, 22624472 - 22624520
Alignment:
Q  554 tatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataata 604  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  22624472 tatacatcattaattgaatgaacctaaaa-gtcaaaa-tttgcttataata 22624520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 29006839 - 29006968
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagttta-tatacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  | |||||||||| | ||||||||||||||||||  |  | || | | | || |||||||||||||||||||||      
T  29006839 cggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaaatagaccacatacatcatttattgaatgaatt 29006938  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||| ||   ||||||||||||||||||||    
T  29006939 taaaaagt-ggaattttgcttataatagtga 29006968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 607
Target Start/End: Original strand, 33377494 - 33377547
Alignment:
Q  553 atatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtg 607  Q
    |||||||||||| |||||||||| |||||| | ||||||||| ||||||||||||    
T  33377494 atatacatcattaattgaatgaatctaaaatg-caaaattttacttataatagtg 33377547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 601
Target Start/End: Complemental strand, 34321496 - 34321397
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgctta 599  Q
    |||||||||||| || | ||| | ||||||||||||||| |||| ||  || || |||||||||| | ||||||||||||||| ||  ||||||||||||    
T  34321496 ttgactttttaggttcattcatttaatgatgtatgtagtctatattatgaaccacatacatcattaaatgaatgaacctaaaaagt--aaattttgctta 34321399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 35877316 - 35877358
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagatt 515  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||    
T  35877316 tccctccggtccttattataagaaaaagttgactttttagatt 35877358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 37895401 - 37895359
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagatt 515  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||    
T  37895401 tccctccggtccttattataagaaaaagttgactttttagatt 37895359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 607
Target Start/End: Original strand, 6462788 - 6462844
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtg 607  Q
    |||| ||||||||||||||||||||| ||||||  | ||||||||| |||||||||||    
T  6462788 atcacatacatcatttattgaatgaatctaaaaaat-aaaattttgtttataatagtg 6462844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Original strand, 12721674 - 12721754
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatataca--aatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| ||| ||||| |  || || |||||||||| |||||||||||||||||    
T  12721674 actttttaggttcattcaattaatgatgtatgtggttcatatatatgaaccacatacatcattaattgaatgaacctaaaa 12721754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 12721757 - 12721677
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatataca--aatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| ||| ||||| |  || || |||||||||| |||||||||||||||||    
T  12721757 actttttaggttcattcaattaatgatgtatgtggttcatatatatgaaccacatacatcattaattgaatgaacctaaaa 12721677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 609
Target Start/End: Original strand, 21142096 - 21142224
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaaccta 579  Q
    |||| |||||||| ||||| |  || ||||||||| |  || |||||||||||| |||||||| ||| | | ||||||||||||| ||| |||||| |||    
T  21142096 gtcactattataaacaaaaatcaacattttagattcatgcattaaatgatgtatttagtttataataaagaccatatacatcattaattaaatgaatcta 21142195  T
Q  580 aaacgtcaaaattttgcttataatagtgat 609  Q
    |||  | ||| |||||||||||||| ||||    
T  21142196 aaatat-aaacttttgcttataataatgat 21142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 533
Target Start/End: Original strand, 27537061 - 27537114
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgta 533  Q
    |||||||||||||||||||| || || ||||||||| | ||| |||||||||||    
T  27537061 ggtcattattataagcaaaaatttacattttagattcattcattaaatgatgta 27537114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 28815868 - 28815916
Alignment:
Q  559 atcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||| ||||||||||||| ||| || ||||||||||||||||||    
T  28815868 atcatttattaaatgaacctaaaaagtc-aacttttgcttataatagtga 28815916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 593
Target Start/End: Original strand, 40952554 - 40952657
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| ||||| | ||||| ||||||||||||||| ||| ||| |||  | |||||| ||| ||||||||||| ||||| ||||    
T  40952554 tataagcaaattttgactttt-agattcattcaattaatgatgtatgtagtctataatataaactacatacattattaattgaatgaacttaaaa-gtca 40952651  T
Q  588 aaattt 593  Q
    ||||||    
T  40952652 aaattt 40952657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 50519343 - 50519389
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataat 603  Q
    |||||||||| ||||||||||||||||| ||||||  ||||||||||||    
T  50519343 atacatcattaattgaatgaacctaaaaagtcaaa--tttgcttataat 50519389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 16171046 - 16170942
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| ||||||||| |||| |  || ||||||||| | | | ||||||||||||||||| ||| ||| | | |||||||| |||| |||||||||| |    
T  16171046 cggtcactattataaggaaaaatcaacattttagatttattaattaaatgatgtatgtagtctataataaagaccatatacaccattaattgaatgaatc 16170947  T
Q  578 taaaa 582  Q
    |||||    
T  16170946 taaaa 16170942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 477 - 545
Target Start/End: Complemental strand, 17658045 - 17657977
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat 545  Q
    |||| ||||| ||||||| |||| || | |||||||||| | |||||||||||| |||||||| |||||    
T  17658045 ttcgatcattgttataagtaaaactttattttttagattcattcaataaatgatatatgtagtctatat 17657977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 588
Target Start/End: Original strand, 20787571 - 20787670
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||| | |||||||||||| ||| ||| || ||| || |||||||||| | |||||||| |||||| ||||    
T  20787571 tataagcaaaa-ttgactttttaggttcattcatttaatgatgtatgttgttcatattataaaccacatacatcattaaatgaatgaatctaaaaagtca 20787669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 552 - 588
Target Start/End: Complemental strand, 34595752 - 34595716
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  34595752 catatacatcattaattgaatgaacctaaaaagtcaa 34595716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 552 - 588
Target Start/End: Original strand, 34595760 - 34595796
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  34595760 catatacatcattaattgaatgaacctaaaaagtcaa 34595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 548 - 603
Target Start/End: Original strand, 44551272 - 44551325
Alignment:
Q  548 aaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataat 603  Q
    ||||||||||||||||| ||||||| ||| ||||| |||  |||||||||||||||    
T  44551272 aaatcatatacatcattaattgaataaacttaaaaagtc--aattttgcttataat 44551325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 8e-26; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 474 - 606
Target Start/End: Original strand, 13462932 - 13463063
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatg 573  Q
    |||| |||||| ||||| |||||||||||  ||||||||||  | ||||||||||||||||||| | |||||| ||| || |||||||||||| ||||||    
T  13462932 ccctccggtcactattagaagcaaaagtttgctttttagatccattcaataaatgatgtatgtaatctatatataaaccacatacatcatttaatgaatg 13463031  T
Q  574 aacctaaaacgtcaaaattttgcttataatagt 606  Q
    ||||||||| ||| || ||||||||||||||||    
T  13463032 aacctaaaaagtc-aatttttgcttataatagt 13463063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 486 - 608
Target Start/End: Complemental strand, 13463061 - 13462940
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    |||||||||||||| |||||||||||| || | ||| |||||||||||||| ||||||||| | || | ||||||||||||||||||| | |||||| |     
T  13463061 tattataagcaaaaattgactttttaggttcattcattaaatgatgtatgtggtttatatatagattacatacatcatttattgaatggatctaaaaag- 13462963  T
Q  586 caaaattttgcttataatagtga 608  Q
    |||| |||||||| |||||||||    
T  13462962 caaacttttgcttctaatagtga 13462940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 482 - 566
Target Start/End: Complemental strand, 24111232 - 24111148
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcattta 566  Q
    ||||||||||||| ||||||| | |||||||||| | |||||||||||||||| ||||||||||| ||| || ||||||||||||    
T  24111232 tcattattataagtaaaagttcaatttttagatttattcaataaatgatgtatatagtttatatataaaccacatacatcattta 24111148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 519 - 611
Target Start/End: Complemental strand, 28991544 - 28991451
Alignment:
Q  519 tcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatca 611  Q
    ||||||||||||||||||||| ||||| | |||||| |||||||| |||||||||||| |||||| | |||  |||| ||||||||||||||||    
T  28991544 tcaataaatgatgtatgtagtatatattaaaaatcacatacatcagttattgaatgaatctaaaatgacaattttttacttataatagtgatca 28991451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 476 - 536
Target Start/End: Complemental strand, 32124263 - 32124203
Alignment:
Q  476 cttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||| || |||||    
T  32124263 cttcggtcattattataagcaaaaattgactttttagattcattcaataaataatatatgt 32124203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 486 - 608
Target Start/End: Original strand, 18491672 - 18491794
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatc-atttattgaatgaacctaaaacg 584  Q
    ||||||||| ||||  | |||||||||||| | | || |||||||||||||||| |||||   || || ||||||| ||||||||||||||||||||| |    
T  18491672 tattataagaaaaaaatcactttttagattcatttaacaaatgatgtatgtagtctatatgtgaaccacatacatcaatttattgaatgaacctaaaaag 18491771  T
Q  585 tcaaaattttgcttataatagtga 608  Q
    || || |||| |||||||||||||    
T  18491772 tc-aacttttacttataatagtga 18491794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 583
Target Start/End: Complemental strand, 3012501 - 3012391
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagttta-tatacaaatcatatacatcatttattgaat 572  Q
    |||||| ||||| | ||||||||||| || |  ||||||||| | |||||||||||||||||| |||||  ||| | | || ||||||||||||||||||    
T  3012501 cccttcagtcataaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgttgtttacaataaagaccacatacatcatttattgaat 3012402  T
Q  573 gaacctaaaac 583  Q
    || ||||||||    
T  3012401 gatcctaaaac 3012391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 588
Target Start/End: Complemental strand, 3418881 - 3418782
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||||| ||| |||||||| ||| |||| |  || ||||||||||||| ||||||||||||||||| ||||    
T  3418881 tataagcaaaa-ttgactttttaggttcattcaattaataatgtatgtggttcatattatgaaccatatacatcattaattgaatgaacctaaaaagtca 3418783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 481 - 536
Target Start/End: Complemental strand, 5085489 - 5085434
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||||||||||||||| | |||||||||||| || |||||||||||| |||||||    
T  5085489 gtcattattataagcaacaattgactttttagtttcactcaataaatgttgtatgt 5085434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 582
Target Start/End: Complemental strand, 18491804 - 18491693
Alignment:
Q  472 atcccttcggtcattattataagcaaaagttgactttttagattgactcaataaa-tgatgtatgtagtttatatacaaatcatatacatcatttattga 570  Q
    |||||| |||||| ||||||||| ||||||||||||||||| || | |||||||| |||||||||| ||| | ||| | |  | ||||||||||| || |    
T  18491804 atccctccggtcactattataagtaaaagttgactttttaggttcattcaataaattgatgtatgtggttcacatatagactacatacatcatttgttaa 18491705  T
Q  571 atgaacctaaaa 582  Q
    ||||| ||||||    
T  18491704 atgaatctaaaa 18491693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 523 - 582
Target Start/End: Original strand, 24111148 - 24111207
Alignment:
Q  523 taaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||| || ||||||    
T  24111148 taaatgatgtatgtggtttatatataaactatatacatcatttattgaataaatctaaaa 24111207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 31632249 - 31632186
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||| |||||| ||||||||| ||||||||||||||||| || | | ||||||||||||||||    
T  31632249 tccctccggtcactattataagtaaaagttgactttttaggttcatttaataaatgatgtatgt 31632186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 608
Target Start/End: Original strand, 8449585 - 8449709
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata--caa-atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||| || |  |||| |||| | |||||||||||||||||| || ||||||  ||| ||||||| ||||||| |||||||||| ||||||    
T  8449585 tattataagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctatataatcaagatcatatgcatcattaattgaatgaatctaaaa 8449684  T
Q  583 cgtcaaaattttgcttataatagtga 608  Q
      |  || ||||||||||||||||||    
T  8449685 tat-taatttttgcttataatagtga 8449709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 608
Target Start/End: Original strand, 8458389 - 8458513
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata--caa-atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||| || |  |||| |||| | |||||||||||||||||| || ||||||  ||| ||||||| ||||||| |||||||||| ||||||    
T  8458389 tattataagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctatataatcaagatcatatgcatcattaattgaatgaatctaaaa 8458488  T
Q  583 cgtcaaaattttgcttataatagtga 608  Q
      |  || ||||||||||||||||||    
T  8458489 tat-taatttttgcttataatagtga 8458513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 621
Target Start/End: Original strand, 16120966 - 16121111
Alignment:
Q  476 cttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatga 574  Q
    ||||||||| ||||||||| |||||||  ||||||| ||| | |||||||||||||||  | || |||| ||   | || |||||||||||||| |||||    
T  16120966 cttcggtcactattataagtaaaagttatctttttaaattcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatga 16121065  T
Q  575 acctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    | |||||| ||   | ||||||||||||||||||||  |||||||||    
T  16121066 atctaaaaagt-tgatttttgcttataatagtgatcggagggagtat 16121111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 580
Target Start/End: Original strand, 14173395 - 14173496
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| |  | |||||||||| | ||||||||||| ||||||||| ||| |||   | || ||||||||||||||||||||| ||    
T  14173395 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatct 14173494  T
Q  579 aa 580  Q
    ||    
T  14173495 aa 14173496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 580
Target Start/End: Original strand, 14177931 - 14178032
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| |  | |||||||||| | ||||||||||| ||||||||| ||| |||   | || ||||||||||||||||||||| ||    
T  14177931 ggtcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatct 14178030  T
Q  579 aa 580  Q
    ||    
T  14178031 aa 14178032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 624
Target Start/End: Original strand, 31632188 - 31632256
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtattta 624  Q
    |||||||||||||| ||||||||||||| ||| || |||| ||||||||||||| |  ||||||||||||    
T  31632188 atacatcatttattaaatgaacctaaaaagtc-aacttttacttataatagtgaccggagggagtattta 31632256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 15517226 - 15517122
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacc 577  Q
    ||||||||||||||||||||| |  |  ||||||||| | ||| |||||||||||||| || |||| || | |  |||||||||||||| |||||||| |    
T  15517226 cggtcattattataagcaaaaatcaatattttagattcattcattaaatgatgtatgtggtctataataaagacgatatacatcatttaatgaatgaatc 15517127  T
Q  578 taaaa 582  Q
    |||||    
T  15517126 taaaa 15517122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 588
Target Start/End: Original strand, 21478579 - 21478667
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    ||||||||||||||| | ||||| |||||||||||| ||| ||| || | | || |||||||||| |||||||||||| ||||| ||||    
T  21478579 ttgactttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaaccaaaaacatcaa 21478667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 610
Target Start/End: Original strand, 32254825 - 32254956
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| ||||||||| |||| || || ||||||| | | ||  ||||||||||||||||| ||| ||| | | || |||||||||||| |||||||| |    
T  32254825 cggtcactattataaggaaaaattaacattttagaatcattcgttaaatgatgtatgtagtctataataaagaccacatacatcatttaatgaatgaatc 32254924  T
Q  578 taaaacgtcaaaattttgcttataatagtgatc 610  Q
    |||||  |  || ||||||||||||||||||||    
T  32254925 taaaatat-taacttttgcttataatagtgatc 32254956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 10731584 - 10731505
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| ||||||| || | |||| |||||||||| | |||||||||||||||    
T  10731584 actttttaggttcattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaatgaacctaaaa 10731505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Original strand, 19687496 - 19687575
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||||||| || | | ||| || |||||||||| |||||||||||||||||    
T  19687496 actttttaggttcattcaattaatgatgtatgtagttcatgtcataaaccacatacatcattaattgaatgaacctaaaa 19687575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 601
Target Start/End: Original strand, 4156365 - 4156464
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgctta 599  Q
    |||||||||||| || | ||| | |||||||||||| ||  |||| | ||||||| ||||||||| | ||||||||||||||| |||  |||||||||||    
T  4156365 ttgactttttaggttcattcatttaatgatgtatgtggtccatattataaatcatgtacatcattaaatgaatgaacctaaaaagtc--aattttgctta 4156462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 589
Target Start/End: Original strand, 9908165 - 9908251
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaa 589  Q
    ||||||||| || | ||||| |||||||||||| ||  ||| ||  ||||| |||||||||| ||||||||||||||||| ||||||    
T  9908165 actttttaggttcattcaatcaatgatgtatgtggtccataatatgaatcacatacatcattaattgaatgaacctaaaaagtcaaa 9908251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 544
Target Start/End: Complemental strand, 26527319 - 26527261
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata 544  Q
    |||||||||||||| || || ||||||||| | ||| |||||||||||||| |||||||    
T  26527319 tattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtttata 26527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 30438745 - 30438787
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagatt 515  Q
    |||||||| || |||||||||| ||||||||||||||||||||    
T  30438745 tcccttcgatccttattataagaaaaagttgactttttagatt 30438787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 582
Target Start/End: Original strand, 31714537 - 31714643
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaa 575  Q
    |||||||| |||||||||||||| |  || |||||| || | ||| |||| ||||||| |  | |||| || | ||||||||||||||| ||||||||||    
T  31714537 ttcggtcactattataagcaaaaatcaacattttagtttcattcattaaacgatgtatatgatatataataaatatcatatacatcattaattgaatgaa 31714636  T
Q  576 cctaaaa 582  Q
    |||||||    
T  31714637 cctaaaa 31714643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 608
Target Start/End: Complemental strand, 16199179 - 16199127
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||| ||||||||||||||| || | | ||||||||||||||||||    
T  16199179 atacatcatttaatgaatgaacctaaaatgt-agatttttgcttataatagtga 16199127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 583
Target Start/End: Complemental strand, 33053861 - 33053796
Alignment:
Q  519 tcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaac 583  Q
    |||||||||||||||||| || || | || | |||| ||||||||||||||||||||| |||||||    
T  33053861 tcaataaatgatgtatgttgtctacaataaagatcacatacatcatttattgaatgaatctaaaac 33053796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 3212337 - 3212273
Alignment:
Q  519 tcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||| |||||||||||| ||  ||| || |||||| |||||||||| |||||||||||||||||    
T  3212337 tcaattaatgatgtatgtggtccataatataaatcacatacatcattaattgaatgaacctaaaa 3212273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 582
Target Start/End: Original strand, 3673848 - 3673880
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||||||||||||||| ||||||    
T  3673848 atcatatacatcatttattgaatgaatctaaaa 3673880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 609
Target Start/End: Complemental strand, 6033099 - 6032972
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||||||||||||||||  || |  |||||| || |  |||||||||||||||||||| |||| || | | || |||||| ||||||| |||||| ||||    
T  6033099 tcattattataagcaaattttaatattttaggttcatccaataaatgatgtatgtagtctatattaaagaccacatacattatttattaaatgaatctaa 6033000  T
Q  581 aacgtcaaaattttgcttataatagtgat 609  Q
    ||  || || |||| ||||||||||||||    
T  6032999 aatatc-aatttttacttataatagtgat 6032972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 583
Target Start/End: Complemental strand, 13276545 - 13276517
Alignment:
Q  555 atacatcatttattgaatgaacctaaaac 583  Q
    |||||||||||||||||||||||||||||    
T  13276545 atacatcatttattgaatgaacctaaaac 13276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 15718522 - 15718462
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    |||||||||||||| || |||||| | ||| | |||||||||||||||||| || ||||||    
T  15718522 tattataagcaaaaattcacttttaaaattcattcaataaatgatgtatgtggtgtatata 15718462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 572
Target Start/End: Complemental strand, 30460739 - 30460655
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    ||||||||||| || ||||||||||| || ||||| |||||||||||| || | || || | |||| |||||||||| |||||||    
T  30460739 tataagcaaaaatttactttttagatagattcaattaatgatgtatgtggtctttattatatatcacatacatcattgattgaat 30460655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 8e-26; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 480 - 608
Target Start/End: Original strand, 52112881 - 52113008
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| ||||||||||||||||| |||||||| ||| | |||||||||||||||||| || |||||| ||| || ||||||||||||||  |||||||||    
T  52112881 ggtcactattataagcaaaagttcactttttatattcattcaataaatgatgtatgtggtctatatagaaaccacatacatcatttattagatgaaccta 52112980  T
Q  580 aaacgtcaaaattttgcttataatagtga 608  Q
    ||| ||| || |||| |||||||||||||    
T  52112981 aaaagtc-aacttttacttataatagtga 52113008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 473 - 588
Target Start/End: Complemental strand, 39940628 - 39940513
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| || ||| ||||||||| |||| || |||||||||||| | ||||||||| ||||||||||| |||||| ||| ||||||||||||||||| |||    
T  39940628 tccctccgatcactattataagtaaaaatttactttttagattcattcaataaataatgtatgtagtctatatataaaccatatacatcatttattaaat 39940529  T
Q  573 gaacctaaaacgtcaa 588  Q
    |||||||||| |||||    
T  39940528 gaacctaaaaagtcaa 39940513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 473 - 608
Target Start/End: Original strand, 34768277 - 34768411
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||| |||| ||||||||| || |||||||| |||   |||||||||||||||| |||| |||||| | |||| |||||| |||| ||||||    
T  34768277 tccctccggtcactattgtaagcaaaatttcactttttaaattctttcaataaatgatgtatatagtctatatatagatcacatacattatttgttgaat 34768376  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||| ||| || ||||||||||||||||||    
T  34768377 gaacctaaaaagtc-aacttttgcttataatagtga 34768411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 473 - 608
Target Start/End: Complemental strand, 52113017 - 52112883
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||||| |||| ||||||||| ||||||||||||||||| || |   |||||||||||||||| |||| |||| | | || ||||||||||||||||||    
T  52113017 tcccttcagtcactattataagtaaaagttgactttttaggttcatctaataaatgatgtatgtggtttctatatagaccacatacatcatttattgaat 52112918  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||  ||||| ||  || ||||||||||||||||||    
T  52112917 gaatataaaaagt-gaacttttgcttataatagtga 52112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 52923322 - 52923456
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagttta-tatacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| || ||||||||| || | |||||||||||||||||| ||  | || | | |||| ||||||||||||||||||    
T  52923322 ccctccggtcactattataagcaaaatttcactttttaggttcattcaataaatgatgtatgtggtccattaaatatatcacatacatcatttattgaat 52923421  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||| || | | ||||||||||||||||||    
T  52923422 gaacctaaaaagt-agatttttgcttataatagtga 52923456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 19175722 - 19175595
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaaccta 579  Q
    |||| |||||||||||||| |  |||||||||||| | |||||||||||||||||| ||| || | | | | || |||||||||||||||||||||||||    
T  19175722 gtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgtggttcattaaatagaccacatacatcatttattgaatgaaccta 19175623  T
Q  580 aaacgtcaaaattttgcttataatagtga 608  Q
    ||| ||  ||||||| |||||||||||||    
T  19175622 aaaagt-gaaattttacttataatagtga 19175595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 477 - 620
Target Start/End: Complemental strand, 42660493 - 42660352
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaac 576  Q
    |||||||| ||||||||||||||||| | |||||| | | | |||||||||||||||||| || ||||||   ||  ||||||||||||||||||||||     
T  42660493 ttcggtcactattataagcaaaagttcattttttaaaatcattcaataaatgatgtatgtggtctatataatgat-gtatacatcatttattgaatgaat 42660395  T
Q  577 ctaaaacgtcaaaattttgcttataatagtgatcaaagggagta 620  Q
    ||||||  || || |||||||||||||||| | | |||||||||    
T  42660394 ctaaaaaatc-aacttttgcttataatagtaaacgaagggagta 42660352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 621
Target Start/End: Complemental strand, 34768414 - 34768273
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| ||||||||||||||||||||||||||| || | |||| |||| ||||||||  | |||||| | |  ||||||||||||||||||| |||  |    
T  34768414 cggtcactattataagcaaaagttgactttttaggttcattcaacaaataatgtatgtgatctatatatagactatatacatcatttattgaaagaattt 34768315  T
Q  579 aaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    |||| ||  |||||||||||| |||||||| |  |||||||||    
T  34768314 aaaaagt-gaaattttgcttacaatagtgaccggagggagtat 34768273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 38834609 - 38834719
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatataca-aatcatatacatcatttattgaa 571  Q
    ||||| |||||| |||||||||||||| || | |||||||||| | | |||||||||||||| |||| |||||| |  | ||||||||||||||||||||    
T  38834609 tccctccggtcactattataagcaaaaatttattttttagattcattaaataaatgatgtatatagtctatataaatgaccatatacatcatttattgaa 38834708  T
Q  572 tgaacctaaaa 582  Q
    |||| ||||||    
T  38834709 tgaatctaaaa 38834719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 5431345 - 5431473
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| |||||||||||||| || |||||||||||| | ||||||||||| |||||| || ||| |  | | || ||||||||||||||||||||| ||    
T  5431345 cggtcactattataagcaaaaattcactttttagattcattcaataaatgaagtatgttgtctatgtgtagaccacatacatcatttattgaatgaatct 5431444  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    |||| ||  || ||||||||||| ||||||    
T  5431445 aaaaagt-taatttttgcttatattagtga 5431473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 487 - 575
Target Start/End: Original strand, 36163970 - 36164058
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaa 575  Q
    |||||||||| || || | |||||||||| | |||||||||||||||||||||||||||| | | || ||| |||||||||||||||||    
T  36163970 attataagcagaatttcattttttagatttattcaataaatgatgtatgtagtttatatatataccacatatatcatttattgaatgaa 36164058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 494 - 610
Target Start/End: Original strand, 39940506 - 39940621
Alignment:
Q  494 gcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    ||||||||||||||||||| || | | |||||||||||||| | ||||||||| | |  | |||||| |||||||||||||| |||||| || ||| |||    
T  39940506 gcaaaagttgactttttaggttcatttaataaatgatgtatatggtttatatatagactacatacattatttattgaatgaatctaaaaagt-aaatttt 39940604  T
Q  594 tgcttataatagtgatc 610  Q
    | |||||||||||||||    
T  39940605 tacttataatagtgatc 39940621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 19175592 - 19175721
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| ||||||||| |||| || ||||||||| || | |||||||||||||||||| || ||| | |  || || ||||||||||||||||||||| |    
T  19175592 cggtcactattataagtaaaatttcactttttaggttcattcaataaatgatgtatgtggtctatttaatgaaccacatacatcatttattgaatgaatc 19175691  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||| || | | ||||||||||||||||||    
T  19175692 taaaaagt-agatttttgcttataatagtga 19175721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 582
Target Start/End: Original strand, 42915652 - 42915754
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| || |||||||||||||||| ||||||| || | ||||||||||||| ||||||| |||||| | | || ||| |||||||||| ||||||| ||    
T  42915652 ggtcactaatataagcaaaagttgattttttaggttcattcaataaatgatgcatgtagtctatatatagaccacatatatcatttatttaatgaactta 42915751  T
Q  580 aaa 582  Q
    |||    
T  42915752 aaa 42915754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 5431476 - 5431348
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| || ||||||||||| || |||||||||||| | |||||||||||||||||| || || | | | |  | |||| |||||||||||||||| ||    
T  5431476 cggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtatgtggtctacacatagacaacatacttcatttattgaatgaatct 5431377  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    |||| ||  || ||||||||||||||||||    
T  5431376 aaaaagt-gaatttttgcttataatagtga 5431348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 6079070 - 6079171
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    ||||||||| |||||||||||||||||||||| || | | |||||||||| ||||| || | ||||  ||  | ||||||||||||||||||||| ||||    
T  6079070 gtcattattgtaagcaaaagttgactttttaggtttatttaataaatgatatatgtggtctgtatatgaacgacatacatcatttattgaatgaatctaa 6079169  T
Q  581 aa 582  Q
    ||    
T  6079170 aa 6079171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 608
Target Start/End: Complemental strand, 52923458 - 52923330
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaa-atcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| |  ||||||||| || | ||||||||||||||||||  | ||| ||    | || ||||||||||||||||||||||||    
T  52923458 ggtcactattataagcaaaaatctactttttaggttcattcaataaatgatgtatgtgatatatttaatggaccacatacatcatttattgaatgaacct 52923359  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    |||| ||  |||||||||||||||||||||    
T  52923358 aaaaagt-gaaattttgcttataatagtga 52923330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 608
Target Start/End: Original strand, 1409051 - 1409182
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattga-ctcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaa 575  Q
    |||||||| ||||||||||||||||| |||||||||||| |  | ||||||| |||||| |||| |||| | | | |  |||||||||||||||||||||    
T  1409051 ttcggtcactattataagcaaaagttcactttttagattcatttaaataaataatgtatctagtctatacatagaccgcatacatcatttattgaatgaa 1409150  T
Q  576 cctaaaacgtcaaaattttgcttataatagtga 608  Q
     |||||| |   || ||||||||||||||||||    
T  1409151 tctaaaaag-ataatttttgcttataatagtga 1409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 480 - 588
Target Start/End: Complemental strand, 6079198 - 6079090
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| ||||||||| |||| |  || ||||||||| | |||||||||||||||||| ||| ||||||| | || ||| |||||||||| ||| ||||||    
T  6079198 ggtcactattataagaaaaaatccaccttttagattcattcaataaatgatgtatgtcgttcatatacagaccacatatatcatttattaaataaaccta 6079099  T
Q  580 aaacgtcaa 588  Q
    ||| |||||    
T  6079098 aaaagtcaa 6079090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 582
Target Start/End: Complemental strand, 36164097 - 36163990
Alignment:
Q  477 ttcggtcattattataagcaaaagttgacttttt--agattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatga 574  Q
    ||||||||||||||||||||||| || |||||||  | ||| | |||||||||||| ||||| || |||||| |||  | |||||||||||||||||| |    
T  36164097 ttcggtcattattataagcaaaaattaactttttttaaattcattcaataaatgatatatgtggtatatatataaactacatacatcatttattgaataa 36163998  T
Q  575 acctaaaa 582  Q
    | ||||||    
T  36163997 atctaaaa 36163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 47446767 - 47446664
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| ||||||||| ||||  | |||||||| ||| | ||||||||||||||||||||| |||||  | |||| |||||| |||||| |||| |||||    
T  47446767 cggtcactattataagtaaaaactcactttttaaattcattcaataaatgatgtatgtagtctatatgtagatcacatacataatttatagaattaacct 47446668  T
Q  579 aaaa 582  Q
    ||||    
T  47446667 aaaa 47446664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 481 - 608
Target Start/End: Original strand, 51022723 - 51022848
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||| |||||||||||||||||||  ||||||||| | |||||||||||||| ||   |||| ||| |  ||| ||||| ||||||||||||||||| ||    
T  51022723 gtcactattataagcaaaagttgatattttagattcattcaataaatgatgtgtgatcttta-atataggtcacatacaccatttattgaatgaaccaaa 51022821  T
Q  581 aacgtcaaaattttgcttataatagtga 608  Q
    ||  |  |||||||||||||||||||||    
T  51022822 aatat-taaattttgcttataatagtga 51022848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 24981977 - 24981848
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  || ||||||||| | ||| |||||||||||||  |||||| ||||| |  | |||||||||||| |||||| | |    
T  24981977 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 24981878  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||  || ||||||||||||||||||    
T  24981877 taaaacgt-taatttttgcttataatagtga 24981848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 6340704 - 6340639
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    ||||||||||||||||||| || ||||||||| || | |||||||||||| ||||| |||||||||    
T  6340704 gtcattattataagcaaaaattaactttttaggttcattcaataaatgatatatgtggtttatata 6340639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 546
Target Start/End: Complemental strand, 19580335 - 19580262
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    ||||| |||||| |||||||| |||||||  | |||||||||| | ||||||||||||||||||||| ||||||    
T  19580335 tccctccggtcactattataaacaaaagtatattttttagattcattcaataaatgatgtatgtagtgtatata 19580262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 42660355 - 42660416
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    |||||||| | | ||||||||||||||||||| |||||||||| | ||||||||||||||||    
T  42660355 tcccttcgtttactattataagcaaaagttgattttttagattcattcaataaatgatgtat 42660416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 602
Target Start/End: Original strand, 2492508 - 2492603
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataa 602  Q
    ||||||||| | ||| | |||||||||||| ||||||| || | |||||||||||||||||||||||| | |||||| || ||| ||||||||||||    
T  2492508 ttttagattcattcactgaatgatgtatgtggtttataataaagatcatatacatcatttattgaatggatctaaaatgt-aaacttttgcttataa 2492603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 602
Target Start/End: Original strand, 17310430 - 17310545
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    ||||||||||||  || ||||||||  || | ||||| |||||||||| | || |||| ||||||||||||| |||||| |||||||||||||| ||  |    
T  17310430 attataagcaaattttaactttttaagttcattcaattaatgatgtatatggtctataatacaaatcatatatatcattaattgaatgaacctacaaaat 17310529  T
Q  586 caaaattttgcttataa 602  Q
    ||||| |||||||||||    
T  17310530 caaaa-tttgcttataa 17310545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 610
Target Start/End: Original strand, 31998189 - 31998324
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatg 573  Q
    |||||||||| |||||||||||||| ||    ||||| ||| | | | ||||||||||||||  | |||| || | ||||||||||||||| | ||||||    
T  31998189 ccttcggtcactattataagcaaaactttgtattttatattcatttattaaatgatgtatgtgatctataataaagatcatatacatcattaaatgaatg 31998288  T
Q  574 aacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    || |||||| | |||| ||||||||||||||||||||    
T  31998289 aatctaaaatg-caaagttttgcttataatagtgatc 31998324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 615
Target Start/End: Complemental strand, 9902706 - 9902568
Alignment:
Q  476 cttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaa 575  Q
    ||||||||| || ||||||||||| ||   |||||| | | | |||||||||||| ||||||||||||||| | | || |||||||||||| | ||| ||    
T  9902706 cttcggtcactactataagcaaaaatttgatttttaaagtcattcaataaatgatatatgtagtttatatatagaccacatacatcatttaataaattaa 9902607  T
Q  576 cctaaaacgtcaaaattttgcttataatagtgatcaaagg 615  Q
    ||||||| ||  || |||| ||||||| ||||||| ||||    
T  9902606 cctaaaaagt-taatttttacttataacagtgatcgaagg 9902568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 495 - 621
Target Start/End: Complemental strand, 38834731 - 38834605
Alignment:
Q  495 caaaagttgactttttagattgactcaataaatgatgtatgtagtt-tatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||||| |||||||||||| | |||||||||||||||| | ||  | |||| | |  |||||||||||||||| |||||| ||||||  | ||| |||    
T  38834731 caaaagtttactttttagattcattcaataaatgatgtatatggtcatttatatagactatatacatcatttatttaatgaatctaaaaaat-aaatttt 38834633  T
Q  594 tgcttataatagtgatcaaagggagtat 621  Q
    ||||||||||||||| |  |||||||||    
T  38834632 tgcttataatagtgaccggagggagtat 38834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 41563108 - 41563029
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || |||||||||||||||||||| |||||| |||   |  | ||||||||||||||||||||||||||||    
T  41563108 actttttaggttcactcaataaatgatgtatgtggtttataatatggactacatacatcatttattgaatgaacctaaaa 41563029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 582
Target Start/End: Complemental strand, 44674020 - 44673918
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagttta-tatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||||||||||||||||| || | |||||||||| | ||||| |||||| ||||||||||| |||| | | || ||| |||||||||| ||| |||||    
T  44674020 ggtcattattataagcaaaaatttaatttttagattcattcaat-aatgatatatgtagtttattatatagaccacatatatcatttattaaataaacct 44673922  T
Q  579 aaaa 582  Q
    ||||    
T  44673921 aaaa 44673918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 1409191 - 1409129
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatg 535  Q
    ||||| |||||| |||||||||||||| ||  ||||||||||| | |||||||||||||||||    
T  1409191 tccctccggtcactattataagcaaaaattatctttttagattcattcaataaatgatgtatg 1409129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 548
Target Start/End: Original strand, 10256792 - 10256854
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatataca 548  Q
    ||||||||| |||| || |||||||||||| | |||||||||||||||||| || ||||||||    
T  10256792 tattataagaaaaaattcactttttagattcattcaataaatgatgtatgtggtctatataca 10256854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 608
Target Start/End: Original strand, 14214605 - 14214662
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||| |||||||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  14214605 atcacatacatcatttattgaatgaacctaaaaagt-aagtttttgcttataatagtga 14214662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 29043452 - 29043562
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaa 571  Q
    ||||| || |||||||||||||||||| |  ||||||||| || | ||||||||||| |||| |||| |||| |    | || |||||||||||||||||    
T  29043452 tccctccgctcattattataagcaaaaatcaactttttaggttcattcaataaatgacgtatttagtctatatttttgaccaaatacatcatttattgaa 29043551  T
Q  572 tgaacctaaaa 582  Q
    |||||||||||    
T  29043552 tgaacctaaaa 29043562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 610
Target Start/End: Complemental strand, 34597647 - 34597525
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaa 580  Q
    ||||||| ||||||||||| || |||||||||||| | |||| ||||||||||||| || |      | | || ||||||||||| ||||||||| ||||    
T  34597647 gtcattactataagcaaaaattcactttttagattcattcaacaaatgatgtatgtggtct------agaccacatacatcatttgttgaatgaatctaa 34597554  T
Q  581 aacgtcaaaattttgcttataatagtgatc 610  Q
    || ||  || ||||||||||||||||||||    
T  34597553 aaagt-gaatttttgcttataatagtgatc 34597525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 610
Target Start/End: Original strand, 34953902 - 34954031
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaaccta 579  Q
    |||| |||||||||||||| |  |  ||||| ||| | ||| |||||||||||||| || |||| || | | ||||||||||||| |||||||||| |||    
T  34953902 gtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatcta 34954001  T
Q  580 aaacgtcaaaattttgcttataatagtgatc 610  Q
    |||  | ||| ||||||||||||||||||||    
T  34954002 aaatat-aaatttttgcttataatagtgatc 34954031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 608
Target Start/End: Complemental strand, 45010902 - 45010845
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||||||| ||||||||||  ||||| | |||||||||||||||||||||||    
T  45010902 atcatatacatcattaattgaatgaatttaaaatg-caaaattttgcttataatagtga 45010845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 589
Target Start/End: Original strand, 48636747 - 48636833
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaa 589  Q
    ||||||||| || | ||||| |||||||||||| || |||| || |||||| |||||||||| | ||||||||||||||| ||||||    
T  48636747 actttttaggttcattcaatcaatgatgtatgtggtctataatataaatcaaatacatcattaactgaatgaacctaaaaagtcaaa 48636833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 538
Target Start/End: Complemental strand, 12750624 - 12750559
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtag 538  Q
    |||||||||| | ||||||||  |||| ||||||||||| ||| | ||||||||||||||||||||    
T  12750624 tcccttcggttactattataaataaaaattgactttttaaattcattcaataaatgatgtatgtag 12750559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 41563028 - 41563105
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| || | |||||||||||||||||||||  |||| | ||| || |||||||||||||||| |||||||||||    
T  41563028 tttttaggttcattcaataaatgatgtatgtagtccatattataaaccacatacatcatttattgagtgaacctaaaa 41563105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 42140455 - 42140364
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||| |||||||||||| || | ||||| |||||||||||| || ||| || | | ||||||||||||| |||||||||||| ||||    
T  42140455 tataagcaaaa-ttgactttttaggtttattcaattaatgatgtatgtggtatat-tatagaccatatacatcattaattgaatgaaccaaaaa 42140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 588
Target Start/End: Original strand, 4682952 - 4683051
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| || |||||||||||| | ||||| |||||||||||| ||| ||| || | | || |||||||||| |||||||||||| |||| ||||    
T  4682952 tataagcaaaa-ttaactttttagatttattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaaccaaaaaagtca 4683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 620
Target Start/End: Original strand, 10256848 - 10256913
Alignment:
Q  553 atatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagta 620  Q
    |||||||||||||||||||||||| |||||  |  ||||||| |||||||||||||||  ||||||||    
T  10256848 atatacatcatttattgaatgaacttaaaagtt--aaatttttcttataatagtgatcggagggagta 10256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 608
Target Start/End: Complemental strand, 25547533 - 25547478
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||| ||||||||||||    
T  25547533 catatacatcatttattaaatgaatctaaaatgtc-aaattttgattataatagtga 25547478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 601
Target Start/End: Complemental strand, 11989445 - 11989323
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| || ||||||||||||||   |||||||||| | ||| ||||||||||||||||| | || || | |  | |||| ||||||| ||||||||||    
T  11989445 cggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtctttattatagactacatacgtcatttaatgaatgaacc 11989346  T
Q  578 taaaacgtcaaaattttgcttata 601  Q
    |||||  ||||| |||||||||||    
T  11989345 taaaa-atcaaacttttgcttata 11989323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 587
Target Start/End: Original strand, 21852452 - 21852550
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||||||| || | ||||| |||||| ||||| ||| |||| |   |||| |||||||||| ||||||||||||||||| ||||    
T  21852452 tataagcaaaa-ttgactttttaggttcattcaattaatgatatatgtggttcatattatggatcacatacatcattaattgaatgaacctaaaaagtca 21852550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Original strand, 31909778 - 31909857
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||||||||| || ||||| | ||| || |||||||||| |||||||||||||||||    
T  31909778 actttttaggttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaacctaaaa 31909857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 536
Target Start/End: Original strand, 34597522 - 34597581
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||| ||| |||||||||||||| || |||||||||||| | |||| |||||||||||||    
T  34597522 ttcgatcactattataagcaaaaattcactttttagattcattcaacaaatgatgtatgt 34597581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 589
Target Start/End: Original strand, 34598894 - 34598977
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaa 589  Q
    ||||||||| | ||||  |||||||||||| ||| ||| ||  |||||||||||||||| |||||||||| |||||| ||||||    
T  34598894 ttttagattcattcaaataatgatgtatgtggttcataatatgaatcatatacatcattaattgaatgaatctaaaaagtcaaa 34598977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 42761457 - 42761512
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    ||||||||||||||||||||| || || ||||||||| | ||||| ||||||||||    
T  42761457 cggtcattattataagcaaaactttacattttagattcattcaattaatgatgtat 42761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 575
Target Start/End: Original strand, 43738607 - 43738706
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaa 575  Q
    |||||||| |||||||||||||| || || ||||| ||| | ||| || ||||| |||||  ||||| ||| ||||||||||||||||| ||| ||||||    
T  43738607 ttcggtcactattataagcaaaaattaacattttaaattcattcattagatgatatatgtgatttataataaaaatcatatacatcattaattaaatgaa 43738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 601
Target Start/End: Original strand, 48605099 - 48605195
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttata 601  Q
    ||||||||| || | ||||| |||||||||||| ||  ||| ||  ||||| |||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  48605099 actttttaggttcattcaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaatgaacctaaaaagtcaaa--tttgcttata 48605195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Original strand, 3384222 - 3384284
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||| ||||||||| ||||||||||| || |||||||||||  | ||||| ||||||||||||    
T  3384222 ccctccggtcattaatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 3384284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 604
Target Start/End: Original strand, 6340634 - 6340699
Alignment:
Q  538 gtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataata 604  Q
    ||||||||| ||| || ||| |||||||||||||||||||||||| ||  || ||||||||||||||    
T  6340634 gtttatatataaaccacatatatcatttattgaatgaacctaaaaagt-taatttttgcttataata 6340699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 536
Target Start/End: Complemental strand, 14214670 - 14214608
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||| |||||| ||||||||||||||  | ||||||||| || | ||||||||||||||||||    
T  14214670 ccctccggtcactattataagcaaaaacttactttttaggttcattcaataaatgatgtatgt 14214608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 601
Target Start/End: Complemental strand, 18023738 - 18023628
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| || ||||||||| || | ||| | |||||||||||| ||| ||| || ||| ||||||||| ||| | ||||||||||||||| ||      
T  18023738 tataagcaaaa-ttcactttttaggttcattcatttaatgatgtatgtggttcataatataaaccatatacattattaaatgaatgaacctaaaaagt-- 18023642  T
Q  588 aaattttgcttata 601  Q
    ||||||||||||||    
T  18023641 aaattttgcttata 18023628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 588
Target Start/End: Complemental strand, 23392664 - 23392563
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    ||||||||||||  || |||||||||||| | | ||| | |||||||||| ||||||| ||   |||||||||||||||  |||||||||||||||| ||    
T  23392664 attataagcaaatttt-actttttagattcatttaattattgatgtatgtggtttataatattgatcatatacatcattagttgaatgaacctaaaatgt 23392566  T
Q  586 caa 588  Q
    |||    
T  23392565 caa 23392563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 45925259 - 45925369
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| || |||||||||||| | ||| | |||||||||||| || ||||| |  || || |||||||||| | ||||||||||||||| ||      
T  45925259 tataagcaaaa-ttcactttttagattcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaaagt-- 45925355  T
Q  588 aaattttgcttata 601  Q
    ||||||||||||||    
T  45925356 aaattttgcttata 45925369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 582
Target Start/End: Original strand, 49586325 - 49586355
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||||||||||||||||||||    
T  49586325 catatacatcatttattgaatgaacctaaaa 49586355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 47827 - 47762
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagt 539  Q
    |||| ||||||||| ||||||||||| ||   |||||||||| | ||| |||||||||||||||||    
T  47827 ccctccggtcattaatataagcaaaactttgatttttagattcattcattaaatgatgtatgtagt 47762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 589
Target Start/End: Complemental strand, 2091808 - 2091771
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaaa 589  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  2091808 catatacatcattaattgaatgaacctaaaaagtcaaa 2091771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 608
Target Start/End: Original strand, 3013615 - 3013743
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| ||||||||||||||  | |  ||||||||| | ||||| |||| ||||||| || | ||| | |||| |||||||||||||| ||||||||  |    
T  3013615 ggtcactattataagcaaaaaattatattttagatttattcaattaatgttgtatgtggtctttattataaataatatacatcatttaatgaatgaatgt 3013714  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    |||| ||  || ||||||||||||||||||    
T  3013715 aaaatgt-taatttttgcttataatagtga 3013743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 606
Target Start/End: Complemental strand, 3549912 - 3549788
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||||||||||||||||| || || ||||| ||| | ||| ||||| |||||||| || ||| ||| | | | |||| |||||| |||||||||| ||||    
T  3549912 tcattattataagcaaaaattaacattttaaattcattcattaaataatgtatgtggtctataataaagaccgtatatatcattaattgaatgaatctaa 3549813  T
Q  581 aacgtcaaaattttgcttataatagt 606  Q
    || || | | ||||||||||||||||    
T  3549812 aatgt-agatttttgcttataatagt 3549788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 3606274 - 3606322
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||||||||||| ||||||||||||||| | ||||| ||||||||||||    
T  3606274 attataagcaaaa-ttgactttttagattcattcaattaatgatgtatgt 3606322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 8751463 - 8751540
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| || | ||||| |||||||||||| |||||| | | ||| || |||||||||| |||||||||||||||||    
T  8751463 tttttaggttcattcaattaatgatgtatgtggtttatgttataaaccacatacatcattaattgaatgaacctaaaa 8751540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 8751541 - 8751464
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| || | ||||| |||||||||||| |||||||  | ||| || |||||||||| |||||||||||||||||    
T  8751541 tttttaggttcattcaattaatgatgtatgtggtttataacataaaccacatacatcattaattgaatgaacctaaaa 8751464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 608
Target Start/End: Original strand, 9902568 - 9902700
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatga 574  Q
    |||||| ||| | ||||||| |||| || ||||||||| || | | | |||||||||||||| || |||||| |||  | ||| |||||||||||||||     
T  9902568 ccttcgatcactgttataagtaaaaattaactttttaggttaatttattaaatgatgtatgtggtctatatataaactacatatatcatttattgaatg- 9902666  T
Q  575 acctaaaacgtcaaaattttgcttataatagtga 608  Q
    || | |||  ||||| ||||||||||| ||||||    
T  9902667 actttaaaaatcaaatttttgcttatagtagtga 9902700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 582
Target Start/End: Complemental strand, 13288472 - 13288367
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaac 576  Q
    |||||||| |||||||||||||| |  ||||| || ||| | |||||||||||||||||| || |||| | | | || |||||  ||||||||||| ||     
T  13288472 ttcggtcactattataagcaaaaatgcactttataaatttattcaataaatgatgtatgtggtatataaatagaccacatacaatatttattgaataaat 13288373  T
Q  577 ctaaaa 582  Q
    ||||||    
T  13288372 ctaaaa 13288367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 15278674 - 15278597
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| || | ||||| |||||||||||| ||||||| || | |||| |||||||||| | |||||||||||||||    
T  15278674 tttttaggttcattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaatgaacctaaaa 15278597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 19580196 - 19580245
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    ||||||||||||| ||||||||| | ||| | ||||||||||||||||||    
T  19580196 attataagcaaaaattgacttttaaaattcattcaataaatgatgtatgt 19580245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 31909858 - 31909781
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| || | ||||| |||||||||||| ||||||| || | | || |||||||||| |||||||||||||||||    
T  31909858 tttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacctaaaa 31909781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 621
Target Start/End: Complemental strand, 42915781 - 42915641
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| ||||||||||||||    ||||||||  || | | |||||||||| ||||| || |||||| | |  | || ||||||||||||||||||||||    
T  42915781 ggtcactattataagcaaaaaaacactttttaagttcattaaataaatgatatatgtggtctatatatagactacatgcatcatttattgaatgaaccta 42915682  T
Q  580 aaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    |||  || || ||||||||||| |||||| || || ||||||    
T  42915681 aaaaatc-aacttttgcttatattagtgaccagagagagtat 42915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 608
Target Start/End: Original strand, 48083509 - 48083637
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| || |  |||||| || | ||| |||||||||||||| || ||| ||| | ||||||||| | ||| |||||||||| ||    
T  48083509 ggtcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctataataaagatcatatacgttattaattgaatgaatct 48083608  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    ||||  | ||| ||||||||||| ||||||    
T  48083609 aaaatat-aaagttttgcttatattagtga 48083637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 553 - 593
Target Start/End: Original strand, 12030310 - 12030349
Alignment:
Q  553 atatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  12030310 atatacatcattgattgaatgaacctaaaa-gtcaaaattt 12030349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 492 - 572
Target Start/End: Original strand, 13288352 - 13288432
Alignment:
Q  492 aagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    |||||||||| || |||||||||| | |||||||||  ||||||| || ||| || | | || ||||||||||||||||||    
T  13288352 aagcaaaagtggattttttagatttattcaataaatattgtatgtggtctatttatataccacatacatcatttattgaat 13288432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 588
Target Start/End: Original strand, 15285257 - 15285356
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||| |||||||||| ||| | | ||| |||||||| ||||||| ||   |||| |||||||||| | ||||||||||||||| ||||    
T  15285257 tataagcaaaa-ttgagtttttagattaacttatttaattatgtatgtggtttataatatggatcacatacatcattaaatgaatgaacctaaaaagtca 15285355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 582
Target Start/End: Original strand, 27864495 - 27864527
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||| ||||||||||||||||||||||||||||    
T  27864495 atcaaatacatcatttattgaatgaacctaaaa 27864527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 588
Target Start/End: Original strand, 37215187 - 37215286
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| ||||||||||||||| | ||| | |||||||||||| ||| || |||   |||| |||||||||| | | ||||||||||||| ||||    
T  37215187 tataagcaaaa-ttgactttttagattcattcatttaatgatgtatgtggttcataatatggatcacatacatcattaaataaatgaacctaaaaagtca 37215285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 486 - 588
Target Start/End: Original strand, 41824272 - 41824374
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    |||||||||||||| || | |||||||||| | ||||||||| |||||||||||||||||| | | || |||||||||||||||||||||||||||| ||    
T  41824272 tattataagcaaaaattcattttttagattcattcaataaattatgtatgtagtttatatatagaccacatacatcatttattgaatgaacctaaaaagt 41824371  T
Q  586 caa 588  Q
    |||    
T  41824372 caa 41824374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 479 - 582
Target Start/End: Original strand, 44274546 - 44274649
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| |||||||| ||||||||||| ||||||||| | |||||||||||| |||||||| |||||||| |  | ||||||||||||||||||||| ||    
T  44274546 cggtcactattataaacaaaagttgacattttagattcattcaataaatgatatatgtagtctatatacagactacatacatcatttattgaatgaatct 44274645  T
Q  579 aaaa 582  Q
    ||||    
T  44274646 aaaa 44274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 473 - 609
Target Start/End: Complemental strand, 41824402 - 41824267
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||| || |||||| |||| |||||||||||| || | |||||||||||||||||| || |||||| |||  | |||||| |||||||||||    
T  41824402 tccctccggtcactactataagtaaaaattgactttttaggttcattcaataaatgatgtatgtggtctatatataaactacatacataatttattgaat 41824303  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgat 609  Q
    ||| ||||||  |  || |||||||||||||||||||    
T  41824302 gaatctaaaaaat-gaatttttgcttataatagtgat 41824267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 608
Target Start/End: Original strand, 14952776 - 14952898
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacg 584  Q
    |||||||||||||||||  ||||||| ||| | ||||||||||||| ||||||| ||||| | | |||| |||||||||||| |||||||||  |||| |    
T  14952776 tattataagcaaaagtttgctttttaaattcattcaataaatgatgcatgtagtctatataatagatcacatacatcatttaatgaatgaactaaaaaag 14952875  T
Q  585 tcaaaattttgcttataatagtga 608  Q
    || ||||||||||||||| |||||    
T  14952876 tc-aaattttgcttataagagtga 14952898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 608
Target Start/End: Complemental strand, 44274667 - 44274549
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    ||||||||||| || |||||||||||| | ||||||||||||||||||||| | |||| | |  | ||| ||||||||||||||||| |||||| ||| |    
T  44274667 tataagcaaaaattcactttttagattcattcaataaatgatgtatgtagtctgtatatagactacatatatcatttattgaatgaatctaaaatgtc-a 44274569  T
Q  589 aattttgcttataatagtga 608  Q
    | ||||| ||||||||||||    
T  44274568 acttttgtttataatagtga 44274549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 480 - 608
Target Start/End: Complemental strand, 41805409 - 41805281
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||||||||||||||||| ||  | ||||||||| ||||| |||||||||||| | || |||| || | |  |||||||||||| ||||||||||  |    
T  41805409 ggtcattattataagcaaaactttgcattttagattcactcattaaatgatgtatatggtctataataaagactatatacatcattaattgaatgaattt 41805310  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    |||| | |||||||||||||||||||||||    
T  41805309 aaaatg-caaaattttgcttataatagtga 41805281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 482 - 608
Target Start/End: Complemental strand, 31102082 - 31101956
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||||||||||||||||||||  | ||||||||| | ||| |||||||||||||| |||||| ||| | |||||||| |||||| |  ||||||| ||||    
T  31102082 tcattattataagcaaaagtttgcattttagattcattcattaaatgatgtatgtggtttataataaagatcatatatatcattaaccgaatgaatctaa 31101983  T
Q  581 aacgtcaaaattttgcttataatagtga 608  Q
    || | ||||  |||||||||||||||||    
T  31101982 aatg-caaacatttgcttataatagtga 31101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 601
Target Start/End: Complemental strand, 30202609 - 30202499
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| | |||||||||| || | ||||| ||||||||||||||| |||| ||  ||||| |||||||||| ||||||||||||||||| ||||    
T  30202609 tataagcaaaact-gactttttaggttcattcaattaatgatgtatgtagtctataatatgaatcacatacatcattgattgaatgaacctaaaaagtca 30202511  T
Q  588 aaattttgcttata 601  Q
    ||  ||||||||||    
T  30202510 aa--tttgcttata 30202499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 582
Target Start/End: Complemental strand, 18731400 - 18731303
Alignment:
Q  486 tattataagcaaaagtt-gactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||||||    |||||||||| | ||||||||| ||||||||||| |||| | | |||| |||||||||||||||||| |||||||||    
T  18731400 tattataagcaaaagttcttttttttagattcattcaataaataatgtatgtagtctatacatagatcacatacatcatttattgaatcaacctaaaa 18731303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 582
Target Start/End: Original strand, 43542929 - 43543026
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||  |||||| |||||||||||| | ||||||||||||| || ||||||||| ||  ||  | ||||||||||||||||||||||||||||    
T  43542929 tattataagagaaagttcactttttagattcattcaataaatgatgcatctagtttatattaagaacgagatacatcatttattgaatgaacctaaaa 43543026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 15119776 - 15119910
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    ||||||||||| |||||||||||||| || || ||||||||| | ||| |||||||||||||| || ||| ||| | |  |||||||||||| | |||||    
T  15119776 cccttcggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctataataaagacaatatacatcattaaatgaat 15119875  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
     || |||||| || | | ||||||||||||||||||    
T  15119876 aaatctaaaatgt-agatttttgcttataatagtga 15119910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 621
Target Start/End: Complemental strand, 45472546 - 45472404
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagat-tgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| ||||||||| |||| |||| ||||||||  | | ||||||||| |||||||||||| | ||| | |  | |||||||||||||||||||||      
T  45472546 cggtcactattataagaaaaaattgattttttagagcttattcaataaataatgtatgtagttcacatatagactacatacatcatttattgaatgaatt 45472447  T
Q  578 taaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||| || ||| |||| ||||||||||||||| || |||||||    
T  45472446 taaaaagt-aaatttttacttataatagtgatcgaatggagtat 45472404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 611
Target Start/End: Complemental strand, 13333583 - 13333451
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  || ||||||||| | | | |||||||||||||  |||||| |||||||  | |||||||||||| |||||| | |    
T  13333583 cggtcactattataagcaaaaatctacattttagattcattgattaaatgatgtatgcggtttataatacaaactacatacatcatttaatgaatgtatc 13333484  T
Q  578 taaaacgtcaaaattttgcttataatagtgatca 611  Q
    ||||||||   | |||||||||||||||||||||    
T  13333483 taaaacgt-tgatttttgcttataatagtgatca 13333451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 621
Target Start/End: Complemental strand, 23143628 - 23143480
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaa 571  Q
    ||||| |||||| |||||||||||||| |  ||||||||| || | |||||||||||||||| | ||  || ||  | |||| |||||||||||||| |     
T  23143628 tccctccggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtatttggtccataatgtagatcaaatacatcatttattaag 23143529  T
Q  572 tgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||||||||| ||   | |||||||||||||||||| | ||||||||||    
T  23143528 tgaacctaaaaagt-tgatttttgcttataatagtgaccgaagggagtat 23143480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 621
Target Start/End: Complemental strand, 23555418 - 23555270
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaa 571  Q
    ||||| |||||| |||||||||||||| |  ||||||||| || | |||||||||||||||| | ||  || ||  | |||| |||||||||||||| |     
T  23555418 tccctccggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtatttggtccataatgtagatcaaatacatcatttattaag 23555319  T
Q  572 tgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||||||||| ||   | |||||||||||||||||| | ||||||||||    
T  23555318 tgaacctaaaaagt-tgatttttgcttataatagtgaccgaagggagtat 23555270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 593
Target Start/End: Complemental strand, 37396329 - 37396226
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| || || | ||||| |||||||||||| || |||| || ||||||||||||||||| |||||||||| |||||| ||||    
T  37396329 tataagcaaattttgactttt-aggttcattcaatcaatgatgtatgtggtctataatataaatcatatacatcattaattgaatgaatctaaaa-gtca 37396232  T
Q  588 aaattt 593  Q
    ||||||    
T  37396231 aaattt 37396226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 610
Target Start/End: Complemental strand, 1961444 - 1961314
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| |  || ||||||||| | ||| |||||||||||||| || ||| ||| | | ||||||||||||| ||| ||  || ||    
T  1961444 ggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattaaacaaatct 1961345  T
Q  579 aaaacgtcaaaattttgcttataatagtgatc 610  Q
    |||| || ||| ||||||||||||||||||||    
T  1961344 aaaatgt-aaatttttgcttataatagtgatc 1961314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 622
Target Start/End: Complemental strand, 27964391 - 27964277
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagt 606  Q
    ||||||||| | | |||||||||||||| |||   ||||| | | || |||||| ||||||||||||||||||||| ||| || |||||||||||| |||    
T  27964391 ttttagattcatttaataaatgatgtatctagaccatatatagaccacatacataatttattgaatgaacctaaaaagtc-aatttttgcttataaaagt 27964293  T
Q  607 gatcaaagggagtatt 622  Q
    || |  ||||||||||    
T  27964292 gaccggagggagtatt 27964277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 25270992 - 25270863
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  || ||||||||| | ||| |||||||||||||  |||||| ||||| |  | |||||||||||| |||||| | |    
T  25270992 cggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 25270893  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||   | ||||||||||||||||||    
T  25270892 taaaacgt-tgatttttgcttataatagtga 25270863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 593
Target Start/End: Original strand, 9071220 - 9071323
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| ||||| | ||||| ||||||||||||||| ||| ||| ||| || |||||| ||| ||||||||||| ||||| ||||    
T  9071220 tataagcaaattttgactttt-agattcattcaattaatgatgtatgtagtctataatataaaccacatacattattaattgaatgaacttaaaa-gtca 9071317  T
Q  588 aaattt 593  Q
    ||||||    
T  9071318 aaattt 9071323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 23143484 - 23143545
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    |||||||||||| |||||||||||||| |  ||||||||| || ||| ||||||||||||||    
T  23143484 tcccttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtat 23143545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 23555274 - 23555335
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    |||||||||||| |||||||||||||| |  ||||||||| || ||| ||||||||||||||    
T  23555274 tcccttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtat 23555335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 546
Target Start/End: Original strand, 27964282 - 27964355
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatata 546  Q
    ||||| |||||| | |||||||||||| |||||||||||| || | ||||||||| |||||||| || ||||||    
T  27964282 tccctccggtcacttttataagcaaaaattgactttttaggttcattcaataaattatgtatgtggtctatata 27964355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 611
Target Start/End: Complemental strand, 41057024 - 41056892
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||||||||| |  || ||||||||| | ||| |||||||||||||  |||||| ||||| |  | |||||||||||| |||||| | |    
T  41057024 cggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 41056925  T
Q  578 taaaacgtcaaaattttgcttataatagtgatca 611  Q
    |||||| |   | |||||||||||||||||||||    
T  41056924 taaaacat-tgatttttgcttataatagtgatca 41056892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 576
Target Start/End: Complemental strand, 43893212 - 43893155
Alignment:
Q  519 tcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaac 576  Q
    |||||||||| ||||| | || |||||| | |||||||||||||||||||||||||||    
T  43893212 tcaataaatggtgtatatggtctatatatagatcatatacatcatttattgaatgaac 43893155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 621
Target Start/End: Original strand, 41805273 - 41805420
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| ||  | ||||| ||| | ||||| |||||||||| |||| | || || | | ||||||||||||||| ||| |    
T  41805273 ccctccggtcactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattatagaccatatacatcatttaatgagt 41805372  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||| |||||| | |||| |||||||||||||| ||| || |||| ||||    
T  41805373 gaatctaaaatg-caaagttttgcttataataatgaccagagggtgtat 41805420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 545
Target Start/End: Original strand, 45472412 - 45472480
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat 545  Q
    |||| ||| ||||||||| |||| || |||||||| ||| | ||||||||||||||||||||| |||||    
T  45472412 ttcgatcactattataagtaaaaatttactttttaaattcattcaataaatgatgtatgtagtctatat 45472480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 593
Target Start/End: Complemental strand, 4637115 - 4637029
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    ||||||||| | ||||| |||||||||||| ||||||| || | | || |||||| ||| ||||||||||||||||| ||||||||||    
T  4637115 ttttagattcattcaattaatgatgtatgtggtttatattatagaccacatacattattgattgaatgaacctaaaa-gtcaaaattt 4637029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 608
Target Start/End: Original strand, 13333458 - 13333580
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacg 584  Q
    |||||||||||||| |  || ||||||||  | ||| ||||||||||||||||||| || || ||| |  |||||||||||| | |||||| |||||| |    
T  13333458 tattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtttgtattataaaccgcatacatcatttaatcaatgaatctaaaatg 13333557  T
Q  585 tcaaaattttgcttataatagtga 608  Q
    | | | ||||||||||||||||||    
T  13333558 t-agatttttgcttataatagtga 13333580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 621
Target Start/End: Complemental strand, 14952821 - 14952759
Alignment:
Q  558 catcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatcaaagggagtat 621  Q
    ||||||||||||||||||  ||||| | |||| ||||||||||||||| ||||||| |||||||    
T  14952821 catcatttattgaatgaatttaaaaag-caaacttttgcttataatagagatcaaaaggagtat 14952759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 26003434 - 26003568
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| ||||||  ||||||||||||| |  |  |||||| || | ||| ||||||||||||||||| |||| || | | ||||||||||||| |||||||    
T  26003434 ccctccggtcacaattataagcaaaaatcaatattttaggttcattcattaaatgatgtatgtagtatataataaagaccatatacatcattaattgaat 26003533  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| |||||| || | | |||||||||||| |||||    
T  26003534 gaatctaaaatgt-agatttttgcttataaaagtga 26003568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 27881251 - 27881346
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaac 583  Q
    ||||||||||| || |  ||||| ||| | |||||||||||||||||| ||||| | || | | || ||| |||||||||||||||||||||||||    
T  27881251 tataagcaaaaattcatgttttatattcattcaataaatgatgtatgttgtttacaataaataccacatatatcatttattgaatgaacctaaaac 27881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 32143405 - 32143539
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| || || ||||| ||| | | | |||||||||||||| |||||| ||| | |  |||||| ||||| |||||||    
T  32143405 ccctccggtcactattataagcaaaactttacattttaaattcatttattaaatgatgtatgtggtttatgataaagactatatacttcattaattgaat 32143504  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||  ||||| || ||| |||||||||||| |||||    
T  32143505 gaatttaaaatgt-aaagttttgcttataacagtga 32143539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 43341240 - 43341161
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||| | | |||||||||| ||||||||| ||| || ||| || || |||||||||||||||||| ||||||    
T  43341240 actttttagattcatttaataaatgatatatgtagttcatattataaaccacatgcatcatttattgaatgaatctaaaa 43341161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 608
Target Start/End: Original strand, 23738399 - 23738453
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaa-attttgcttataatagtga 608  Q
    |||||||||||||||||| ||||||||| || |||  ||||||||||||||||||    
T  23738399 atacatcatttattgaataaacctaaaatgttaaattttttgcttataatagtga 23738453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 29573829 - 29573922
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||| ||||||||||||||| | | ||| |||||||||| ||||  ||| || ||| || |||||||||| ||| |||||||||||||    
T  29573829 tataagcaaaa-ttgactttttagattcattaaattaatgatgtatatagtccataatataaaccacatacatcattaattaaatgaacctaaaa 29573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 33618322 - 33618229
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||| || ||||||||| || | ||| | ||||||||||||||| ||||| |  || ||||||||||||| | |||||||||||||||    
T  33618322 tataagcaaaa-ttcactttttaggtttattcatttaatgatgtatgtagtctatattatgaaccatatacatcattaaatgaatgaacctaaaa 33618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 583
Target Start/End: Complemental strand, 17866288 - 17866211
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaac 583  Q
    ||||||||| | ||||||||| |||||||| ||||| | || | | || |||||||||||||| ||||||||||||||    
T  17866288 ttttagattcattcaataaattatgtatgttgtttacaataaagaccacatacatcatttattaaatgaacctaaaac 17866211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 575
Target Start/End: Complemental strand, 32630514 - 32630445
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaa 575  Q
    ||||||||| | ||| ||||||||||||||||| ||| ||| | | ||||||||||||| ||||||||||    
T  32630514 ttttagatttattcattaaatgatgtatgtagtctataataaagaccatatacatcattaattgaatgaa 32630445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 582
Target Start/End: Original strand, 36490510 - 36490587
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||| | ||||| |||||||||||| ||| ||| |||  | || |||||||||| |||||||||||||||||    
T  36490510 tttttagattcattcaattaatgatgtatgtggttcataatacgtaccacatacatcattaattgaatgaacctaaaa 36490587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 593
Target Start/End: Original strand, 37396219 - 37396322
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| ||||| | ||||| |||||||||| |  ||||||| | | | || |||||||||| ||||||||||||||||| ||||    
T  37396219 tataagcaaattttgactttt-agattcattcaattaatgatgtatatgatttatattatagaccacatacatcattgattgaatgaacctaaaa-gtca 37396316  T
Q  588 aaattt 593  Q
    ||||||    
T  37396317 aaattt 37396322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 4898261 - 4898197
Alignment:
Q  519 tcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||| |||||||||||| ||  |||| | |||||| |||||||||| |||||||||||||||||    
T  4898261 tcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaa 4898197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 4945655 - 4945591
Alignment:
Q  519 tcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||| |||||||||||| ||  |||| | |||||| |||||||||| |||||||||||||||||    
T  4945655 tcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaa 4945591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Complemental strand, 17844047 - 17843983
Alignment:
Q  519 tcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||| |||||||||||| ||  |||| | ||| ||||||||||||| |||||||||||||||||    
T  17844047 tcaattaatgatgtatgtggtccatattataaaccatatacatcattaattgaatgaacctaaaa 17843983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 27331895 - 27331835
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagt 539  Q
    |||||| |||||||||||||| |  || ||||||||| | ||||| |||||||||||||||    
T  27331895 cggtcactattataagcaaaaatcaacattttagattcattcaattaatgatgtatgtagt 27331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 37195051 - 37195111
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    |||| |||||| || |||||||||||||| |  ||||||||| ||||||| ||||||||||    
T  37195051 ccctccggtcactaatataagcaaaagttaatattttagattcactcaattaatgatgtat 37195111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 43514800 - 43514864
Alignment:
Q  519 tcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||| |||||||||||| ||| ||| || | | ||||||||||||| |||||||||||||||||    
T  43514800 tcaattaatgatgtatgtggttcataatatagaccatatacatcattaattgaatgaacctaaaa 43514864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 608
Target Start/End: Original strand, 24820303 - 24820430
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||| |||||||||||||| || |||| |||| || | |||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||| |||    
T  24820303 ggtcactattataagcaaaaattcacttcttaggttcattcaataaatgatgtatgtggtttatataaagatcacatacatcatttattgaatgaatcta 24820402  T
Q  580 aaacgtcaaaattttgcttataatagtga 608  Q
    ||| |   || ||||||||||||||||||    
T  24820403 aaaag-agaatttttgcttataatagtga 24820430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 582
Target Start/End: Original strand, 13841850 - 13841955
Alignment:
Q  477 ttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaac 576  Q
    |||||||| |||||||||||||| || |||||||| ||| | |||||||||||||||| |||| || ||| |||  | ||||||||||||||||||||||    
T  13841850 ttcggtcactattataagcaaaaatttactttttaaattcattcaataaatgatgtatttagtctacatataaactacatacatcatttattgaatgaac 13841949  T
Q  577 ctaaaa 582  Q
    ||||||    
T  13841950 ctaaaa 13841955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 24820433 - 24820305
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||| |||||||||||||| ||  ||||||||||| | ||||||||||||||||||  | | |||| ||| || ||||||||||||||||||||||||    
T  24820433 cggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgtgatctttatataaaccacatacatcatttattgaatgaacct 24820334  T
Q  579 aaaacgtcaaaattttgcttataatagtga 608  Q
    || | ||  || ||||||||||||||||||    
T  24820333 aagaagt-gaatttttgcttataatagtga 24820305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 24419007 - 24418907
Alignment:
Q  488 ttataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||| || |||||| | | || |||||||||||||||||||||| ||||| ||||    
T  24419007 ttataagcaaaaattcactttttagattcattcaataaatgatgtatgtcgtctatatatagaccacatacatcatttattgaatgaacttaaaaagtca 24418908  T
Q  588 a 588  Q
    |    
T  24418907 a 24418907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 479 - 617
Target Start/End: Original strand, 6260613 - 6260751
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacct 578  Q
    |||||||||||||||||||||||||| ||||||| || | | ||||||||||||||||    |||||| | ||||||||  |||||||||||||||| ||    
T  6260613 cggtcattattataagcaaaagttgaatttttaggtttatttaataaatgatgtatgtgacctatatatagatcatatatttcatttattgaatgaatct 6260712  T
Q  579 aaaacgtcaaaattttgcttataatagtgatcaaaggga 617  Q
    ||||     || |||||||||||||||||| || |||||    
T  6260713 aaaaaaatgaatttttgcttataatagtgaccagaggga 6260751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 621
Target Start/End: Complemental strand, 36308102 - 36307986
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataat 603  Q
    |||||||||||| | ||||||||||||||||| ||| ||||||  || || ||||||||||||||||||||||||||||  || || ||||  |||||||    
T  36308102 actttttagattcattcaataaatgatgtatgcagtctatatatgaaccacatacatcatttattgaatgaacctaaaaaatc-aacttttatttataat 36308004  T
Q  604 agtgatcaaagggagtat 621  Q
    |||||||| |||| ||||    
T  36308003 agtgatcagagggcgtat 36307986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 620
Target Start/End: Complemental strand, 17800739 - 17800624
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataat 603  Q
    |||||||| ||| | |||||||||||||| ||| || |||||| | ||||||| ||||||||||||||||||||||| | ||| || ||||| |||||||    
T  17800739 actttttaaattcattcaataaatgatgtctgtggtctatatatagatcatatgcatcatttattgaatgaacctaataagtc-aacttttgtttataat 17800641  T
Q  604 agtgatcaaagggagta 620  Q
    | |||||| ||||||||    
T  17800640 aatgatcagagggagta 17800624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 24418879 - 24418988
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||| ||||||| || |||||||||||||||  || | |||||||||||||||||| || |||||| | |  | ||||||||||||||||||    
T  24418879 tccctccggtcactattataggctaaagttgactttttaagttcattcaataaatgatgtatgtggtctatatatagacgacatacatcatttattgaat 24418978  T
Q  573 gaacctaaaa 582  Q
    ||| ||||||    
T  24418979 gaatctaaaa 24418988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 473 - 608
Target Start/End: Complemental strand, 13841990 - 13841855
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgac-tttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaa 571  Q
    ||||| |||||| ||||||||  |||  ||||| ||||||| || | |||||||||||||||||||||||||||  | |  | |||||||||||||||||    
T  13841990 tccctacggtcactattataaataaatattgacctttttaggttcattcaataaatgatgtatgtagtttatatgtagactaaatacatcatttattgaa 13841891  T
Q  572 tgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||  ||||| || ||| ||||||||||||||||||    
T  13841890 tgaatttaaaaagt-aaatttttgcttataatagtga 13841855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 28882663 - 28882797
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||| |||||||||  |||||||||||| | |||||||||||||||||| || ||||| | | | || ||| ||||||||||||||    
T  28882663 ccctccggtcactattatgagcaaaagtctactttttagattcattcaataaatgatgtatgtggtatatataatagaccacatatatcatttattgaat 28882762  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
     ||||||||| ||   | ||||||||||||||||||    
T  28882763 aaacctaaaaggt-tgatttttgcttataatagtga 28882797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 34326249 - 34326378
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||||||| |||||||||| ||  | ||||||||| | ||||| |||||||||||| |||||| ||| | |  |||||||||||| ||||||||||      
T  34326249 cggtcattatcataagcaaaactttgcattttagattcattcaattaatgatgtatgttgtttataataaagactatatacatcattaattgaatgaatg 34326348  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||| | ||||||||| |||||||||||||    
T  34326349 taaaatg-caaaattttacttataatagtga 34326378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 482 - 609
Target Start/End: Original strand, 2296481 - 2296608
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacctaa 580  Q
    |||||||||||||||||| || || ||||||||| | ||| |||||||||||| | || ||| ||| | | ||| ||||| ||| |||||||||| ||||    
T  2296481 tcattattataagcaaaattttacattttagattcattcattaaatgatgtatatggtctataataaagaccatgtacattattaattgaatgaatctaa 2296580  T
Q  581 aacgtcaaaattttgcttataatagtgat 609  Q
    || | ||||||||| ||||||||||||||    
T  2296581 aatg-caaaattttacttataatagtgat 2296608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 480 - 607
Target Start/End: Original strand, 5888341 - 5888468
Alignment:
Q  480 ggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacct 578  Q
    ||||| |||||||||||||| || || ||||||||| | ||| |||||||||||||| || ||| ||| | | ||||||||||||| |||||||||| ||    
T  5888341 ggtcactattataagcaaaaattaacgttttagattcattcattaaatgatgtatgttgtctataataaagaccatatacatcattaattgaatgaatct 5888440  T
Q  579 aaaacgtcaaaattttgcttataatagtg 607  Q
    | || || | | |||||||||||||||||    
T  5888441 acaaagt-agatttttgcttataatagtg 5888468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 608
Target Start/End: Original strand, 33070164 - 33070298
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| | |||||||||||| ||    ||||||||| | ||| ||||||||||||||||| |||| || | | |||||||| |||| | |||||    
T  33070164 ccctccggtcactgttataagcaaaactttgtattttagattcattcattaaatgatgtatgtagtctataataaagaccatatacaccattaaatgaat 33070263  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| |||||| | |||||||||||||||||||||||    
T  33070264 gaatctaaaatg-caaaattttgcttataatagtga 33070298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 35969773 - 35969694
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| ||| ||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||    
T  35969773 actttttaggttcattcaattaataatgtatgtagtttatattataaaccatatacatcattaattgaatgaacctaaaa 35969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 608
Target Start/End: Original strand, 10117018 - 10117103
Alignment:
Q  523 taaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||||| || |||| || | ||||||||||||||| |||||||||| |||||| || ||| ||||||||||||||||||    
T  10117018 taaatgatgtatgtggtctataataaatatcatatacatcattaattgaatgaatctaaaatgt-aaatttttgcttataatagtga 10117103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 15037754 - 15037884
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaacc 577  Q
    |||||| |||||||| ||||| |  ||||||||| || | |||||||||||||||||||||| || | | |   || | |||||||||||||||||||||    
T  15037754 cggtcagtattataaacaaaaatctactttttaggttcattcaataaatgatgtatgtagttcattaaataggccacacacatcatttattgaatgaacc 15037853  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    |||||    |||||||| |||||||||||||    
T  15037854 taaaaaaataaaattttacttataatagtga 15037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 623
Target Start/End: Original strand, 17800636 - 17800775
Alignment:
Q  482 tcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaa 581  Q
    |||||||||||| ||||||||||||| |||| || | ||||||||||||| || |  | |||||| | | || | |||||||||||||||||||  ||||    
T  17800636 tcattattataaacaaaagttgacttattaggttcattcaataaatgatgcatatgatctatatatagaccacagacatcatttattgaatgaatttaaa 17800735  T
Q  582 acgtcaaaattttgcttataatagtgatcaaagggagtattt 623  Q
    | ||   |||||| ||||||| |||||||| ||| |||||||    
T  17800736 aagt--gaatttttcttataacagtgatcagaggaagtattt 17800775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 582
Target Start/End: Original strand, 36308003 - 36308099
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||  ||||||||| ||||||| || | |||||||||||||||||| ||| ||||| | |    ||||||||||||||||||||| ||||||    
T  36308003 tattataaataaaagttgattttttaggttcattcaataaatgatgtatgtggttcatatatagactgcatacatcatttattgaatgaatctaaaa 36308099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 608
Target Start/End: Complemental strand, 28882805 - 28882671
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| |  || |||||| || | |||||||||||| ||||| || ||| ||| | | || ||||||||||||||||||    
T  28882805 ccctccggtcactattataagcaaaaatcaaccttttaggtttattcaataaatgatatatgtggtctattatatataccacatacatcatttattgaat 28882706  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||| |||||| || | | ||||||| ||||||||||    
T  28882705 gaatctaaaaagt-agacttttgctcataatagtga 28882671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 610
Target Start/End: Complemental strand, 2296536 - 2296479
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||||||||||||||| |||||||| |||||| || |||||||||||||||||| |||||    
T  2296536 catatacatcatttaatgaatgaatctaaaatgt-aaaattttgcttataataatgatc 2296479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 593
Target Start/End: Complemental strand, 19293123 - 19293038
Alignment:
Q  508 tttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattt 593  Q
    |||||||| | ||||| |||||||||||| || |||| || ||| || |||||||||| ||||||||||||||||| ||||||||||    
T  19293123 tttagattcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaacctaaaa-gtcaaaattt 19293038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 608
Target Start/End: Complemental strand, 24287921 - 24287792
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacc 577  Q
    |||||||||||||||| |||| ||  | ||||||||| | ||| | |||||||||| | || | ||| | | | ||||||||||||||| |||||||| |    
T  24287921 cggtcattattataagtaaaactttgcattttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgaatc 24287822  T
Q  578 taaaacgtcaaaattttgcttataatagtga 608  Q
    ||||| | |||| ||||||||||||||||||    
T  24287821 taaaatg-caaagttttgcttataatagtga 24287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 592
Target Start/End: Original strand, 29916143 - 29916249
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    |||||||||| |  |||||||||||| |  | ||||| ||||||||||||||| |||| || | ||||||||||||||  |||||||||| ||||||  |    
T  29916143 attataagcagattttgactttttagctatattcaattaatgatgtatgtagtctataatatagatcatatacatcatcaattgaatgaatctaaaaaat 29916242  T
Q  586 caaaatt 592  Q
    |||||||    
T  29916243 caaaatt 29916249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 7484758 - 7484649
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| ||||||||||||||||||||| |  || ||||||||| | ||| |||||||||||||| ||  || ||| | |  |||||||||||||| |||||    
T  7484758 ccctacggtcattattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaat 7484659  T
Q  573 gaacctaaaa 582  Q
    ||| ||||||    
T  7484658 gaatctaaaa 7484649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 606
Target Start/End: Original strand, 2805813 - 2805944
Alignment:
Q  475 ccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatg 573  Q
    ||||| ||||||||||||||||||| || || |||| |||| | | | |||||||| ||||| || ||| ||| | ||||||||||| ||| ||||||||    
T  2805813 ccttcagtcattattataagcaaaattttacattttggattcatttattaaatgatatatgtggtctataataaagatcatatacattattaattgaatg 2805912  T
Q  574 aacctaaaacgtcaaaattttgcttataatagt 606  Q
    ||  ||||| || ||||||||  ||||||||||    
T  2805913 aatttaaaatgt-aaaattttatttataatagt 2805944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 5420312 - 5420219
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||| ||||||||||||||| | ||| | ||| |||||||| ||| |||| | | | ||||||||||||| | |||||||||||||||    
T  5420312 tataagcaaaa-ttgactttttagattcattcatttaattatgtatgtggttcatattatagaccatatacatcattaaatgaatgaacctaaaa 5420219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 507 - 608
Target Start/End: Original strand, 7258617 - 7258718
Alignment:
Q  507 ttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatag 605  Q
    ||||||||| | ||| ||||| |||||||| || |||| || | | ||||| ||||||| |||||||||| |||||| || |||||||| ||||||||||    
T  7258617 ttttagattcattcattaaataatgtatgtggtctataataaagaccatatgcatcattaattgaatgaatctaaaatgt-aaaattttacttataatag 7258715  T
Q  606 tga 608  Q
    |||    
T  7258716 tga 7258718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 582
Target Start/End: Complemental strand, 8568934 - 8568852
Alignment:
Q  501 ttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||| || | ||||| |||||||||||| ||| |||| | | | || |||||||||| |||||||||||||||||    
T  8568934 ttgactttttaggttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacctaaaa 8568852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 610
Target Start/End: Complemental strand, 27503035 - 27502906
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaaccta 579  Q
    ||||||||||||||||||| |  || ||||||||  | |||  |||| || |||||||| | ||| | |||||| |||||||||||| ||||||||  ||    
T  27503035 gtcattattataagcaaaaatcaacattttagatacattcataaaataatatatgtagtctttattataaatcacatacatcatttaatgaatgaattta 27502936  T
Q  580 aaacgtcaaaattttgcttataatagtgatc 610  Q
    ||| || ||  ||||||||||||||||||||    
T  27502935 aaatgttaat-ttttgcttataatagtgatc 27502906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 575
Target Start/End: Original strand, 37508942 - 37509036
Alignment:
Q  482 tcattattataagcaaaag-ttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaa 575  Q
    |||||||||||| |||||  || | |||||| ||| | ||||||||| || |||||||| |||||| | |||| |||||||||||||| ||||||    
T  37508942 tcattattataaacaaaaaattcattttttaaattcattcaataaataatatatgtagtatatatatatatcacatacatcatttattaaatgaa 37509036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 534
Target Start/End: Original strand, 2627172 - 2627233
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtat 534  Q
    ||||| |||||| ||||||||||| ||| | |||||||||||| | ||||||||| ||||||    
T  2627172 tccctccggtcactattataagcataagataactttttagattcattcaataaataatgtat 2627233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 589
Target Start/End: Original strand, 4274657 - 4274694
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaaa 589  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  4274657 catatacatcattgattgaatgaacctaaaaagtcaaa 4274694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 608
Target Start/End: Complemental strand, 5888395 - 5888343
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    |||||||||||| |||||||| |||||||||  || ||||||||||||||||||    
T  5888395 atacatcatttaatgaatgaatctaaaacgt-taatttttgcttataatagtga 5888343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 8568849 - 8568934
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    ||||||||| || | ||||| |||||||||||| || |||| ||  || || |||||||||| ||||||||||||||||| |||||    
T  8568849 actttttaggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacctaaaaagtcaa 8568934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 33934094 - 33934185
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||||  |||| ||||||| || | ||||| |||||||||||| || |||| | ||| || |||||||||| |||||||||||||||||    
T  33934094 tataagcaaattttga-tttttaggttcattcaatcaatgatgtatgtggtctata-ataaaccacatacatcattgattgaatgaacctaaaa 33934185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 608
Target Start/End: Complemental strand, 35781282 - 35781234
Alignment:
Q  559 atcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||||||||||||||||  | ||||||||| ||||||||||||    
T  35781282 atcatttattgaatgaacctaaaaaat-aaaattttgtttataatagtga 35781234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 544
Target Start/End: Original strand, 42749059 - 42749124
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata 544  Q
    |||||| || ||||||||||||||   |||||||||| | ||| ||||||||||||||||| ||||    
T  42749059 cggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtctata 42749124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 610
Target Start/End: Original strand, 44521327 - 44521383
Alignment:
Q  553 atatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtgatc 610  Q
    ||||||| |||| |||||||||| ||||||  ||||| ||||||||||||||||||||    
T  44521327 atatacaccattaattgaatgaatctaaaat-tcaaagttttgcttataatagtgatc 44521383  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 536
Target Start/End: Original strand, 45145460 - 45145517
Alignment:
Q  479 cggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgt 536  Q
    |||||| ||||| |||||||||||||| |||||| || | ||||||||| ||||||||    
T  45145460 cggtcactattacaagcaaaagttgacattttaggtttattcaataaataatgtatgt 45145517  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 588
Target Start/End: Complemental strand, 9203509 - 9203410
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| | |||||||| | || | ||||| |||||||||||| || |||| ||  |||||||||||||||| || |||||||| ||||| ||||    
T  9203509 tataagcaaaact-gacttttttggttcattcaattaatgatgtatgtggtctataatatgaatcatatacatcattaatcgaatgaacttaaaaagtca 9203411  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 582
Target Start/End: Complemental strand, 10983912 - 10983880
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaa 582  Q
    |||||||||||||||||||||||||| ||||||    
T  10983912 atcatatacatcatttattgaatgaatctaaaa 10983880  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 601
Target Start/End: Complemental strand, 11302007 - 11301958
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttata 601  Q
    ||||||||||||||| ||||||||| ||||||| ||  ||||||||||||||    
T  11302007 atcatatacatcattaattgaatgatcctaaaaagt--aaattttgcttata 11301958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 601
Target Start/End: Complemental strand, 11302954 - 11302905
Alignment:
Q  550 atcatatacatcatttattgaatgaacctaaaacgtcaaaattttgcttata 601  Q
    ||||||||||||||| ||||||||| ||||||| ||  ||||||||||||||    
T  11302954 atcatatacatcattaattgaatgatcctaaaaagt--aaattttgcttata 11302905  T

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Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 552 - 608
Target Start/End: Original strand, 24052906 - 24052961
Alignment:
Q  552 catatacatcatttattgaatgaacctaaaacgtcaaaattttgcttataatagtga 608  Q
    ||||||||||||||||| ||||||||||||| || | | ||||| ||||||||||||    
T  24052906 catatacatcatttattcaatgaacctaaaaagt-agatttttgtttataatagtga 24052961  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 506 - 582
Target Start/End: Complemental strand, 33934186 - 33934111
Alignment:
Q  506 tttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||| || | ||||| |||||||||||| |||||| || | | || |||||||||| |||||||||||||||||    
T  33934186 tttttaggttcattcaatcaatgatgtatgtggtttat-tatagaccacatacatcattgattgaatgaacctaaaa 33934111  T

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Target: scaffold0756 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 593
Target Start/End: Original strand, 3533 - 3636
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| ||||| | ||||| |||||||||||| |||||||| | | | || |||||||||| ||||||||||||||||| ||||    
T  3533 tataagcaaattttgactttt-agattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaacctaaaa-gtca 3630  T
Q  588 aaattt 593  Q
    ||||||    
T  3631 aaattt 3636  T

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Target: scaffold0542 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 593
Target Start/End: Complemental strand, 3539 - 3436
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||  ||||||||| ||||| | ||||| |||||||||||| |||||||| | | | || |||||||||| ||||||||||||||||| ||||    
T  3539 tataagcaaattttgactttt-agattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaacctaaaa-gtca 3442  T
Q  588 aaattt 593  Q
    ||||||    
T  3441 aaattt 3436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 621
Target Start/End: Complemental strand, 21250 - 21117
Alignment:
Q  486 tattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    ||||||||||||| ||| |||||||||||| | | |||||||||| ||||| || |||||  | | |||||||||| |||||| ||||||| ||||| ||    
T  21250 tattataagcaaatgttcactttttagattcatttaataaatgatatatgtggtctatat-tagaccatatacatcgtttatttaatgaacttaaaaagt 21152  T
Q  586 caaaattttgcttataatagtgatcaaagggagtat 621  Q
    | || |||| ||||||||| |||   ||||||||||    
T  21151 c-aacttttacttataataatgactgaagggagtat 21117  T

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Target: scaffold0148; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 606
Target Start/End: Original strand, 21121 - 21252
Alignment:
Q  473 tcccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaat 572  Q
    ||||||| |||||||||||||| ||||||||||||||||  || | | |||||| ||||||| | || || ||| | | || ||| |||||||||| |||    
T  21121 tcccttcagtcattattataagtaaaagttgactttttaagttcattaaataaacgatgtatatggtcta-atatagaccacatatatcatttattaaat 21219  T
Q  573 gaacctaaaacgtcaaaattttgcttataatagt 606  Q
    ||| |||||| || || | |||||||||||||||    
T  21220 gaatctaaaaagtgaaca-tttgcttataatagt 21252  T

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Target: scaffold1786 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 588
Target Start/End: Original strand, 523 - 624
Alignment:
Q  487 attataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaacgt 585  Q
    ||||||||||||  || |||||||||||| | | ||| | |||||||||| ||||||| ||   |||| |||||||||| ||||||||||||||||||||    
T  523 attataagcaaatttt-actttttagattcatttaattattgatgtatgtggtttataatattgatcacatacatcattaattgaatgaacctaaaacgt 621  T
Q  586 caa 588  Q
    |||    
T  622 caa 624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 14144 - 14065
Alignment:
Q  504 actttttagattgactcaataaatgatgtatgtagtttata-tacaaatcatatacatcatttattgaatgaacctaaaa 582  Q
    ||||||||| || | ||||| |||||| ||||||||||||| || | | ||||||||||||| |||||||||| ||||||    
T  14144 actttttaggttcattcaattaatgatctatgtagtttataatatagaccatatacatcattaattgaatgaatctaaaa 14065  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 604
Target Start/End: Original strand, 12931 - 13041
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatatacaaatcatatacatcatttattgaatgaacctaaaacgtcaa 588  Q
    ||||| |||||||| |||| |||| |||| ||||||||||||||     || |||||| || ||||||| || |||||||||||||| |||||| || ||    
T  12931 tataaacaaaagttaacttcttaggttgattcaataaatgatgtg----gtctatatataagtcatatatataatttattgaatgaatctaaaaagt-aa 13025  T
Q  589 aattttgcttataata 604  Q
    | |||| |||||||||    
T  13026 acttttacttataata 13041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 527
Target Start/End: Complemental strand, 13046 - 13000
Alignment:
Q  481 gtcattattataagcaaaagttgactttttagattgactcaataaat 527  Q
    |||||||||||||| ||||||| |||||||||||| | |||||||||    
T  13046 gtcattattataagtaaaagtttactttttagattcattcaataaat 13000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 22459 - 22569
Alignment:
Q  489 tataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttatat-acaaatcatatacatcatttattgaatgaacctaaaacgtca 587  Q
    ||||||||||| |||||||| ||| || | ||| | |||||||||||| ||| |||| |  || ||||||||||||| | ||||||||||||||| |||     
T  22459 tataagcaaaa-ttgactttgtaggttcattcacttaatgatgtatgtggttcatattattaaccatatacatcattaaatgaatgaacctaaaaagtc- 22556  T
Q  588 aaattttgcttata 601  Q
     |||||||||||||    
T  22557 -aattttgcttata 22569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 582
Target Start/End: Complemental strand, 24747 - 24638
Alignment:
Q  474 cccttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    |||| |||||| |||||||||||||| || |  ||||||||| | ||| |||||||||||||| || ||| ||| | || |||||| | ||| |||||||    
T  24747 ccctccggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctataataaagataatatacgttattaattgaat 24648  T
Q  573 gaacctaaaa 582  Q
    ||| ||||||    
T  24647 gaatctaaaa 24638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 89599 - 89696
Alignment:
Q  476 cttcggtcattattataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaat 572  Q
    ||||| |||||||||||||||||| |  || |||||||||   ||| ||||||||||||||  | ||| ||| | ||||||||||||||| |||||||    
T  89599 cttcgatcattattataagcaaaaatcaacattttagattctttcattaaatgatgtatgtgatctataataaagatcatatacatcattaattgaat 89696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 58381 - 58427
Alignment:
Q  555 atacatcatttattgaatgaacctaaaacgtcaaaattttgcttataat 603  Q
    |||||||||| ||||||||||||||||| ||||||  ||||||||||||    
T  58381 atacatcattaattgaatgaacctaaaaagtcaaa--tttgcttataat 58427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 488 - 575
Target Start/End: Complemental strand, 216400 - 216312
Alignment:
Q  488 ttataagcaaaagttgactttttagattgactcaataaatgatgtatgtagtttat-atacaaatcatatacatcatttattgaatgaa 575  Q
    |||||||||||| || || ||||| ||| | ||| |||||||||||||| |||||| ||| | ||||||| ||||||| ||| ||||||    
T  216400 ttataagcaaaatttaacattttaaattaattcattaaatgatgtatgtcgtttataataaagatcatatgcatcattaattaaatgaa 216312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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