View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21204_low_3 (Length: 425)

Name: NF21204_low_3
Description: NF21204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21204_low_3
NF21204_low_3
[»] chr3 (66 HSPs)
chr3 (22-175)||(42532500-42532653)
chr3 (21-175)||(44421064-44421220)
chr3 (23-175)||(5530178-5530330)
chr3 (47-173)||(2764910-2765032)
chr3 (270-326)||(1745547-1745603)
chr3 (270-350)||(11007743-11007823)
chr3 (270-317)||(15064052-15064099)
chr3 (270-344)||(1311019-1311093)
chr3 (270-340)||(48404865-48404935)
chr3 (272-349)||(11915754-11915831)
chr3 (270-339)||(13921331-13921400)
chr3 (270-355)||(19269924-19270009)
chr3 (270-355)||(26830502-26830587)
chr3 (270-355)||(27449078-27449163)
chr3 (270-326)||(5260956-5261012)
chr3 (279-355)||(7623600-7623676)
chr3 (270-326)||(13905098-13905154)
chr3 (270-326)||(21490094-21490150)
chr3 (280-344)||(23217278-23217342)
chr3 (270-326)||(23773496-23773552)
chr3 (39-175)||(2802057-2802193)
chr3 (270-317)||(5744444-5744491)
chr3 (270-317)||(5781403-5781450)
chr3 (270-317)||(8428199-8428246)
chr3 (270-317)||(16299889-16299936)
chr3 (270-317)||(17762670-17762717)
chr3 (270-317)||(19063990-19064037)
chr3 (270-317)||(19545538-19545585)
chr3 (270-317)||(19610366-19610413)
chr3 (270-317)||(26098841-26098888)
chr3 (270-317)||(26390694-26390741)
chr3 (268-355)||(49915441-49915528)
chr3 (270-340)||(21816726-21816796)
chr3 (278-340)||(29236049-29236111)
chr3 (270-355)||(17582361-17582446)
chr3 (270-355)||(29215982-29216067)
chr3 (279-339)||(11085411-11085471)
chr3 (270-326)||(19223468-19223524)
chr3 (270-350)||(28389968-28390048)
chr3 (270-326)||(29956391-29956447)
chr3 (270-326)||(30005546-30005602)
chr3 (270-326)||(43329823-43329879)
chr3 (287-350)||(1628210-1628273)
chr3 (270-349)||(10803716-10803795)
chr3 (270-317)||(10941725-10941772)
chr3 (270-317)||(18091607-18091654)
chr3 (270-317)||(18104590-18104637)
chr3 (280-355)||(18539794-18539869)
chr3 (270-317)||(28859619-28859666)
chr3 (270-317)||(31250116-31250163)
chr3 (270-317)||(37283551-37283598)
chr3 (281-355)||(4393421-4393495)
chr3 (279-317)||(27711237-27711275)
chr3 (279-317)||(30219366-30219404)
chr3 (278-336)||(46942496-46942554)
chr3 (270-355)||(8110329-8110414)
chr3 (286-355)||(9652568-9652637)
chr3 (286-355)||(11219128-11219197)
chr3 (270-355)||(18380014-18380099)
chr3 (286-355)||(27212857-27212926)
chr3 (286-355)||(29704108-29704177)
chr3 (270-311)||(31433771-31433812)
chr3 (270-326)||(3461370-3461426)
chr3 (270-326)||(5565741-5565797)
chr3 (270-326)||(6718729-6718785)
chr3 (270-310)||(21020100-21020140)
[»] chr7 (47 HSPs)
chr7 (24-175)||(35933113-35933264)
chr7 (24-175)||(47661933-47662085)
chr7 (270-355)||(22486388-22486473)
chr7 (270-326)||(3872247-3872303)
chr7 (270-355)||(816251-816336)
chr7 (270-355)||(10050896-10050981)
chr7 (270-355)||(24605832-24605917)
chr7 (270-349)||(6849271-6849350)
chr7 (270-349)||(23750796-23750875)
chr7 (270-355)||(31042245-31042330)
chr7 (270-355)||(36636500-36636585)
chr7 (270-326)||(21917394-21917450)
chr7 (270-350)||(23577249-23577329)
chr7 (287-326)||(2093439-2093478)
chr7 (271-326)||(3904539-3904594)
chr7 (270-317)||(28800910-28800957)
chr7 (280-355)||(31425581-31425656)
chr7 (270-344)||(1842899-1842973)
chr7 (270-311)||(1824260-1824301)
chr7 (270-355)||(20174014-20174099)
chr7 (286-355)||(22501588-22501657)
chr7 (270-355)||(40847495-40847580)
chr7 (270-326)||(2650888-2650944)
chr7 (270-326)||(11036530-11036586)
chr7 (270-310)||(21871607-21871647)
chr7 (270-350)||(39979684-39979764)
chr7 (270-326)||(45664791-45664847)
chr7 (270-317)||(7733372-7733419)
chr7 (270-349)||(9698598-9698677)
chr7 (270-317)||(15014465-15014512)
chr7 (270-317)||(15330265-15330312)
chr7 (270-317)||(18217861-18217908)
chr7 (270-317)||(26577297-26577344)
chr7 (270-317)||(27806050-27806097)
chr7 (270-317)||(42926480-42926527)
chr7 (270-317)||(47523710-47523757)
chr7 (270-340)||(21623030-21623100)
chr7 (270-344)||(32267352-32267426)
chr7 (270-344)||(38057637-38057711)
chr7 (286-339)||(10222705-10222758)
chr7 (270-355)||(20429459-20429544)
chr7 (270-311)||(27304908-27304949)
chr7 (270-311)||(48933174-48933215)
chr7 (270-326)||(4514788-4514844)
chr7 (270-310)||(11852047-11852087)
chr7 (270-326)||(23699885-23699941)
chr7 (287-355)||(37135362-37135430)
[»] chr1 (54 HSPs)
chr1 (24-175)||(2798199-2798350)
chr1 (24-175)||(6839389-6839540)
chr1 (24-175)||(6831064-6831215)
chr1 (26-175)||(11634325-11634475)
chr1 (24-175)||(8978171-8978323)
chr1 (24-153)||(14478132-14478263)
chr1 (27-172)||(29404769-29404914)
chr1 (270-355)||(9259243-9259328)
chr1 (270-350)||(38531230-38531310)
chr1 (270-340)||(4340416-4340486)
chr1 (270-340)||(41120797-41120867)
chr1 (270-355)||(13102310-13102395)
chr1 (270-355)||(13523021-13523106)
chr1 (286-355)||(14486708-14486777)
chr1 (270-355)||(22789651-22789736)
chr1 (270-355)||(41071895-41071980)
chr1 (270-326)||(32046899-32046955)
chr1 (270-317)||(6459249-6459296)
chr1 (270-317)||(9110035-9110082)
chr1 (270-317)||(12720841-12720888)
chr1 (270-317)||(19865276-19865323)
chr1 (270-317)||(41752465-41752512)
chr1 (270-317)||(45839324-45839371)
chr1 (270-317)||(46339505-46339552)
chr1 (270-317)||(50845390-50845437)
chr1 (280-355)||(51973418-51973493)
chr1 (270-355)||(9464097-9464182)
chr1 (270-355)||(11917780-11917865)
chr1 (270-355)||(12161808-12161893)
chr1 (270-355)||(15243079-15243164)
chr1 (270-355)||(19081722-19081807)
chr1 (270-355)||(19129610-19129695)
chr1 (270-355)||(22158796-22158881)
chr1 (286-355)||(22603542-22603611)
chr1 (270-355)||(23457891-23457976)
chr1 (270-355)||(52183672-52183757)
chr1 (270-326)||(28229515-28229571)
chr1 (270-317)||(6412113-6412160)
chr1 (270-317)||(25788057-25788104)
chr1 (286-317)||(41063229-41063260)
chr1 (270-317)||(41359020-41359067)
chr1 (280-326)||(7181625-7181671)
chr1 (286-344)||(13195588-13195646)
chr1 (280-350)||(18890619-18890689)
chr1 (278-340)||(46786026-46786088)
chr1 (270-355)||(14760861-14760946)
chr1 (270-355)||(20408220-20408305)
chr1 (288-349)||(29549418-29549479)
chr1 (268-317)||(30928436-30928485)
chr1 (270-350)||(7830030-7830110)
chr1 (270-310)||(12174826-12174866)
chr1 (279-355)||(18894969-18895045)
chr1 (270-310)||(27253915-27253955)
chr1 (286-350)||(29093630-29093694)
[»] chr8 (48 HSPs)
chr8 (24-175)||(32525039-32525190)
chr8 (24-175)||(32529238-32529390)
chr8 (26-175)||(26345444-26345593)
chr8 (24-175)||(44980880-44981031)
chr8 (271-408)||(6084305-6084443)
chr8 (270-355)||(6817046-6817131)
chr8 (270-339)||(30687944-30688013)
chr8 (270-326)||(23752346-23752402)
chr8 (270-317)||(24576084-24576131)
chr8 (270-340)||(5670229-5670299)
chr8 (270-340)||(11938752-11938822)
chr8 (270-340)||(19256219-19256289)
chr8 (270-355)||(3823125-3823210)
chr8 (270-355)||(32961651-32961736)
chr8 (272-340)||(30467016-30467084)
chr8 (270-317)||(8555364-8555411)
chr8 (270-317)||(22939343-22939390)
chr8 (270-317)||(24193256-24193303)
chr8 (270-317)||(27869268-27869315)
chr8 (272-355)||(31344234-31344317)
chr8 (270-340)||(24636659-24636729)
chr8 (270-311)||(8789876-8789917)
chr8 (270-355)||(17103925-17104010)
chr8 (270-311)||(19240903-19240944)
chr8 (270-311)||(19314087-19314128)
chr8 (270-311)||(19488121-19488162)
chr8 (270-355)||(21350470-21350555)
chr8 (286-355)||(37992091-37992160)
chr8 (270-355)||(40289481-40289565)
chr8 (286-326)||(4647831-4647871)
chr8 (270-350)||(17824676-17824756)
chr8 (270-326)||(26399067-26399123)
chr8 (270-350)||(43431619-43431699)
chr8 (286-325)||(8824847-8824886)
chr8 (270-317)||(17810328-17810375)
chr8 (270-317)||(18010120-18010167)
chr8 (270-317)||(19493715-19493762)
chr8 (270-317)||(27910824-27910871)
chr8 (270-317)||(27957243-27957290)
chr8 (286-344)||(29345074-29345132)
chr8 (280-326)||(32247930-32247976)
chr8 (270-311)||(4331014-4331055)
chr8 (270-311)||(5879240-5879281)
chr8 (270-326)||(25273387-25273443)
chr8 (270-310)||(31399568-31399608)
chr8 (245-273)||(32524939-32524967)
chr8 (286-326)||(33413046-33413086)
chr8 (270-310)||(33652604-33652644)
[»] chr4 (44 HSPs)
chr4 (31-175)||(28395025-28395169)
chr4 (271-355)||(30269049-30269133)
chr4 (271-355)||(30283056-30283140)
chr4 (270-355)||(19839171-19839256)
chr4 (270-355)||(55309273-55309358)
chr4 (270-326)||(30508008-30508064)
chr4 (270-317)||(18714932-18714979)
chr4 (270-349)||(32175797-32175876)
chr4 (270-340)||(13028876-13028946)
chr4 (270-340)||(25026564-25026634)
chr4 (270-355)||(22128372-22128457)
chr4 (270-355)||(27040085-27040170)
chr4 (270-326)||(9238685-9238741)
chr4 (270-326)||(14944767-14944823)
chr4 (270-317)||(22156661-22156708)
chr4 (279-350)||(36689674-36689745)
chr4 (270-340)||(4627138-4627208)
chr4 (270-344)||(38223513-38223587)
chr4 (270-355)||(5399601-5399686)
chr4 (270-311)||(9670539-9670580)
chr4 (270-355)||(25147713-25147798)
chr4 (270-355)||(46286289-46286374)
chr4 (270-326)||(4606889-4606945)
chr4 (273-349)||(5473847-5473923)
chr4 (270-326)||(7112006-7112062)
chr4 (270-326)||(19680484-19680540)
chr4 (280-344)||(37761912-37761976)
chr4 (270-317)||(2275738-2275785)
chr4 (270-317)||(9059012-9059059)
chr4 (270-349)||(13564975-13565054)
chr4 (270-317)||(37378683-37378730)
chr4 (270-325)||(42055419-42055474)
chr4 (270-349)||(45532639-45532718)
chr4 (270-340)||(4586818-4586888)
chr4 (278-336)||(9913269-9913327)
chr4 (281-355)||(18051831-18051905)
chr4 (279-317)||(33914089-33914127)
chr4 (272-317)||(12071992-12072037)
chr4 (270-339)||(16915377-16915446)
chr4 (270-355)||(18744130-18744215)
chr4 (270-339)||(34557191-34557260)
chr4 (270-326)||(9239341-9239397)
chr4 (286-326)||(29625346-29625386)
chr4 (270-326)||(38645771-38645827)
[»] scaffold0283 (1 HSPs)
scaffold0283 (24-175)||(16261-16413)
[»] chr2 (33 HSPs)
chr2 (24-175)||(43166033-43166186)
chr2 (270-355)||(13788115-13788200)
chr2 (270-326)||(44476435-44476491)
chr2 (270-317)||(14757181-14757228)
chr2 (270-355)||(22140424-22140509)
chr2 (270-355)||(31266344-31266429)
chr2 (270-355)||(41637608-41637693)
chr2 (270-355)||(41736162-41736247)
chr2 (270-326)||(32008971-32009027)
chr2 (270-326)||(43408571-43408627)
chr2 (270-317)||(28841402-28841449)
chr2 (279-350)||(37802447-37802518)
chr2 (270-337)||(44722940-44723007)
chr2 (270-340)||(23858017-23858087)
chr2 (270-340)||(37552232-37552302)
chr2 (270-355)||(2556085-2556170)
chr2 (286-355)||(9004384-9004453)
chr2 (270-355)||(21293771-21293856)
chr2 (272-317)||(27523039-27523084)
chr2 (270-355)||(29749463-29749548)
chr2 (270-355)||(30783328-30783413)
chr2 (270-355)||(32300441-32300526)
chr2 (270-326)||(13613153-13613209)
chr2 (270-326)||(23388438-23388494)
chr2 (270-326)||(28262383-28262439)
chr2 (270-326)||(28319639-28319695)
chr2 (270-355)||(1141526-1141611)
chr2 (270-355)||(15636795-15636880)
chr2 (270-339)||(26687751-26687820)
chr2 (270-311)||(35697489-35697530)
chr2 (287-355)||(8430286-8430354)
chr2 (286-350)||(29998635-29998699)
chr2 (287-355)||(32185822-32185890)
[»] chr5 (41 HSPs)
chr5 (270-355)||(8886911-8886996)
chr5 (270-355)||(11927846-11927931)
chr5 (270-339)||(32726786-32726855)
chr5 (270-340)||(24138901-24138971)
chr5 (270-355)||(17079399-17079484)
chr5 (270-326)||(4125248-4125304)
chr5 (270-350)||(20959507-20959587)
chr5 (279-350)||(27428081-27428152)
chr5 (272-355)||(36831952-36832035)
chr5 (270-355)||(33818621-33818706)
chr5 (270-326)||(746928-746984)
chr5 (270-326)||(10494760-10494816)
chr5 (270-326)||(16631934-16631990)
chr5 (270-326)||(17039691-17039747)
chr5 (270-317)||(618326-618373)
chr5 (270-317)||(16121899-16121946)
chr5 (270-349)||(23408980-23409059)
chr5 (270-349)||(25673288-25673367)
chr5 (280-355)||(36196388-36196463)
chr5 (270-344)||(25652643-25652717)
chr5 (270-340)||(26708645-26708715)
chr5 (270-340)||(26978379-26978449)
chr5 (272-326)||(40484067-40484121)
chr5 (270-355)||(7888791-7888876)
chr5 (270-355)||(12045721-12045806)
chr5 (272-317)||(17772030-17772075)
chr5 (280-317)||(31853158-31853195)
chr5 (270-338)||(17036472-17036540)
chr5 (270-326)||(23975658-23975714)
chr5 (270-310)||(35620403-35620443)
chr5 (270-326)||(38837731-38837787)
chr5 (270-317)||(2472774-2472821)
chr5 (270-317)||(5982677-5982724)
chr5 (270-317)||(15061005-15061052)
chr5 (270-317)||(23423816-23423863)
chr5 (270-317)||(25397848-25397895)
chr5 (270-317)||(28265535-28265582)
chr5 (270-308)||(33816818-33816856)
chr5 (270-311)||(8108920-8108961)
chr5 (270-311)||(12328286-12328327)
chr5 (270-310)||(17986768-17986808)
[»] chr6 (44 HSPs)
chr6 (270-350)||(12845002-12845082)
chr6 (270-355)||(9892957-9893042)
chr6 (270-350)||(25398001-25398081)
chr6 (270-349)||(495687-495766)
chr6 (270-317)||(6598496-6598543)
chr6 (270-317)||(11049811-11049858)
chr6 (270-355)||(15364518-15364603)
chr6 (270-355)||(26224422-26224507)
chr6 (270-355)||(28364905-28364990)
chr6 (270-326)||(5360432-5360488)
chr6 (270-350)||(12351646-12351726)
chr6 (270-326)||(13145025-13145081)
chr6 (270-326)||(19175837-19175893)
chr6 (270-350)||(21990234-21990314)
chr6 (270-317)||(2992647-2992694)
chr6 (270-317)||(14772693-14772740)
chr6 (270-317)||(18033585-18033632)
chr6 (270-317)||(24661069-24661116)
chr6 (270-317)||(26939619-26939666)
chr6 (272-326)||(17919559-17919613)
chr6 (270-311)||(2669347-2669388)
chr6 (270-311)||(6978315-6978356)
chr6 (270-355)||(12951702-12951787)
chr6 (270-355)||(22083832-22083917)
chr6 (270-355)||(27705416-27705501)
chr6 (287-355)||(14886555-14886623)
chr6 (271-355)||(21140933-21141017)
chr6 (287-350)||(5270391-5270454)
chr6 (270-317)||(6605556-6605603)
chr6 (270-317)||(11077681-11077728)
chr6 (270-317)||(14872151-14872198)
chr6 (280-355)||(22579419-22579494)
chr6 (280-326)||(23281809-23281855)
chr6 (270-355)||(12200688-12200773)
chr6 (286-355)||(20182139-20182208)
chr6 (270-355)||(21691556-21691641)
chr6 (286-355)||(22153783-22153852)
chr6 (270-311)||(33250768-33250809)
chr6 (270-326)||(5192249-5192305)
chr6 (270-326)||(12499239-12499295)
chr6 (270-326)||(12506568-12506624)
chr6 (270-326)||(12509606-12509662)
chr6 (286-326)||(16250878-16250918)
chr6 (270-326)||(18492392-18492448)
[»] scaffold0007 (3 HSPs)
scaffold0007 (270-344)||(3747-3821)
scaffold0007 (270-350)||(202773-202853)
scaffold0007 (286-355)||(276210-276279)
[»] scaffold0006 (2 HSPs)
scaffold0006 (270-336)||(121047-121113)
scaffold0006 (270-326)||(84734-84790)
[»] scaffold0603 (1 HSPs)
scaffold0603 (270-355)||(6039-6124)
[»] scaffold0599 (1 HSPs)
scaffold0599 (272-349)||(7505-7582)
[»] scaffold0576 (1 HSPs)
scaffold0576 (270-355)||(9289-9374)
[»] scaffold0001 (3 HSPs)
scaffold0001 (268-317)||(8168-8217)
scaffold0001 (268-317)||(21900-21949)
scaffold0001 (270-355)||(84297-84382)
[»] scaffold0240 (1 HSPs)
scaffold0240 (272-340)||(15052-15120)
[»] scaffold0009 (1 HSPs)
scaffold0009 (270-326)||(182553-182609)
[»] scaffold0002 (1 HSPs)
scaffold0002 (270-326)||(439986-440042)
[»] scaffold0219 (1 HSPs)
scaffold0219 (270-317)||(19635-19682)
[»] scaffold0058 (1 HSPs)
scaffold0058 (272-355)||(74603-74686)
[»] scaffold0047 (1 HSPs)
scaffold0047 (272-350)||(58581-58659)
[»] scaffold0014 (1 HSPs)
scaffold0014 (270-340)||(22220-22290)
[»] scaffold0717 (1 HSPs)
scaffold0717 (272-317)||(981-1026)
[»] scaffold0076 (1 HSPs)
scaffold0076 (270-326)||(26506-26562)
[»] scaffold0023 (1 HSPs)
scaffold0023 (286-326)||(39779-39819)
[»] scaffold0128 (1 HSPs)
scaffold0128 (270-340)||(10723-10793)
[»] scaffold0019 (1 HSPs)
scaffold0019 (279-317)||(173476-173514)
[»] scaffold0502 (1 HSPs)
scaffold0502 (270-311)||(10930-10971)
[»] scaffold0087 (1 HSPs)
scaffold0087 (280-317)||(37857-37894)
[»] scaffold0108 (1 HSPs)
scaffold0108 (280-316)||(12685-12721)


Alignment Details
Target: chr3 (Bit Score: 146; Significance: 9e-77; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 42532500 - 42532653
Alignment:
Q  22 tatgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactga 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42532500 tatgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctaataattcaaactga 42532599  T
Q  122 acatacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42532600 acatacacacctcttttacatagtttaacaatactaaaacttccaataactacc 42532653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 44421064 - 44421220
Alignment:
Q  21 ttatgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgat--aattcaaac 118  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||| |||||    
T  44421064 ttatgttgttaattgaacaagaaaacagttgcaggaaatgaacaagacaaaggagaaataactgttttcattcatataattggtctgataaaatacaaac 44421163  T
Q  119 tgaacatacacacttcttttacatagtttaacaatac-taaaacttccaataactacc 175  Q
     ||||| ||| || | ||||||||||||| ||||||| ||||||||||||||||||||    
T  44421164 agaacacaca-acctgttttacatagtttgacaatacataaaacttccaataactacc 44421220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 5530178 - 5530330
Alignment:
Q  23 atgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataa-ttcaaactga 121  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||| ||  ||||||||| | ||    |||||||    
T  5530178 atgttgttaattgaacaagaaaacagttgcaggaaatgaacaagacagaggagaaataactgctttcatttatgaaattggtctaacaacaaaaaactga 5530277  T
Q  122 acatacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    ||| ||| |  | ||||||||||||| |||||||||||||||||||||||||||    
T  5530278 acacaca-atctgttttacatagtttgacaatactaaaacttccaataactacc 5530330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 2765032 - 2764910
Alignment:
Q  47 agttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaacatacaca-cttcttttacatagt 145  Q
    |||||||| ||||||||||||    |||||||||| ||||||||||||| |||||| ||| ||||   ||||| |||||||||  | |||||||||||      
T  2765032 agttgcaggaaatgaacaaga----ggagaaataaatgctttcattcatgtaattgatct-ataaaggaaactaaacatacactgcctcttttacatata 2764938  T
Q  146 ttaacaatactaaaacttccaataacta 173  Q
    || |||||||||||||||||||||||||    
T  2764937 ttcacaatactaaaacttccaataacta 2764910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 1745547 - 1745603
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||    
T  1745547 acaaattccttggtcgcaaaatttagtgacggaattagagagagattttacgttttc 1745603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 11007743 - 11007823
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| |||||    
T  11007743 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaat 11007823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 15064052 - 15064099
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  15064052 acaaattccttggtcgcaaaatttagtgacggaattagagagagattt 15064099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 1311019 - 1311093
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| ||||    
T  1311019 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccatcactaaatttccctc 1311093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 48404935 - 48404865
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  48404935 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 48404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 11915831 - 11915754
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||    
T  11915831 aaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 11915754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 13921400 - 13921331
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || ||||||||    
T  13921400 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 13921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 19269924 - 19270009
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| ||||||||||||||||||||| |||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  19269924 acaaattccttggtcgcaaaatttagtgacggaattaaagagggattttacgttttccctcactaaatttccctcactaatttttg 19270009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 26830502 - 26830587
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||| ||||||||||||||||| ||||| || |||||  ||||||||||| |||| ||||| ||||    
T  26830502 acaaattccatggtcgcaaaattttgtgacggaattagagagggatttcacgttttccctctctaaatttccctcactaatttttg 26830587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 27449163 - 27449078
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  27449163 acaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 27449078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 5261012 - 5260956
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  5261012 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 5260956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 7623600 - 7623676
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||  || | |||||| |||| ||||| ||||    
T  7623600 ttggtcgcaaaatttagtgacggaattagagagggatttcacattttccctcacaaaatttccctcactaatttttg 7623676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 13905098 - 13905154
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  13905098 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 13905154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 21490094 - 21490150
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  21490094 acaaattccttggtcgcaaaatttagtgacagaattagagagggattttacattttc 21490150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 23217278 - 23217342
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||  ||||||||||| ||||    
T  23217278 tggtcccaaaatttagtgacggaattagagagggatttcacgttttccctctctaaattttcctc 23217342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 23773552 - 23773496
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  23773552 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 23773496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 2802193 - 2802057
Alignment:
Q  39 aagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaacataca-cacttcttt 137  Q
    ||||||| || ||||| ||||||||||||    |||||||||| ||||||||||||| |||||| ||| ||||   |||||||||||||| | | |||||    
T  2802193 aagaaaataggtgcaggaaatgaacaaga----ggagaaataaatgctttcattcatgtaattgatct-ataaaggaaactgaacatacaccgcctcttt 2802099  T
Q  138 ----tacatagtttaacaatactaaaacttccaataactacc 175  Q
        || ||||||| ||||||||||||||||| |||||||||    
T  2802098 tccatatatagtttcacaatactaaaacttccgataactacc 2802057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 5744491 - 5744444
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  5744491 acaaattccttagtcgcaaaatttagtgacggaattagagagagattt 5744444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 5781450 - 5781403
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  5781450 acaaattccttagtcgcaaaatttagtgacggaattagagagagattt 5781403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 8428246 - 8428199
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||    
T  8428246 acaaattccttggtcgtaaaatttagtgacggaattagagagagattt 8428199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 16299936 - 16299889
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  16299936 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 16299889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 17762717 - 17762670
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  17762717 acaaattccttggtcacaaaatttagtgacggaattagagagcgattt 17762670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 19064037 - 19063990
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19064037 acaaattccttggtcacaaaatttagtgacggaattagagagcgattt 19063990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 19545585 - 19545538
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19545585 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 19545538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 19610413 - 19610366
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19610413 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 19610366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 26098888 - 26098841
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  26098888 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 26098841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 26390694 - 26390741
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  26390694 acaaattccttggtcacaaaatttagtgacggaattagagagggattt 26390741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 355
Target Start/End: Complemental strand, 49915528 - 49915441
Alignment:
Q  268 taacaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  49915528 taacaaatttcttagtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 49915441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 21816796 - 21816726
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  |||| || |||||  || |||||||||    
T  21816796 acaaattccttggtcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaattta 21816726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 29236111 - 29236049
Alignment:
Q  278 cttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  29236111 cttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 29236049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 17582361 - 17582446
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  17582361 acaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 17582446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 29216067 - 29215982
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  29216067 acaaattccttggtcgcaaaatttagtgatggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 29215982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 11085411 - 11085471
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    |||||| |||||||||||||||||||||||||| ||||| ||| ||||  || ||||||||    
T  11085411 ttggtcgcaaaatttagtgacggaattagagagggatttcacaatttccctcactaaattt 11085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 19223524 - 19223468
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| |||||||  ||||||||||||||||||||||||| ||||| || |||||    
T  19223524 acaaattccttggtcgtaaaatttagtgacggaattagagagggattttacgttttc 19223468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 28390048 - 28389968
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||||  |||||| |||||||||||||||||||||||||  ||||| || |||||  || |||||||| |||| |||||    
T  28390048 acaaattcgttggtcgcaaaatttagtgacggaattagagaaggatttcacgttttccctcactaaatttccctcactaat 28389968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 29956447 - 29956391
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| ||||||||||||||||||||||| || ||||| ||||||||    
T  29956447 acaaattccatggtcgcaaaatttagtgacggaattagaaagggatttcacattttc 29956391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 30005602 - 30005546
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| ||||||||||||||||||||||| || ||||| ||||||||    
T  30005602 acaaattccatggtcgcaaaatttagtgacggaattagaaagggatttcacattttc 30005546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 43329823 - 43329879
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| |||||||  ||||||||||||||||||||||||  ||||| ||||||||    
T  43329823 acaaattccttggtcgtaaaatttagtgacggaattagagaaggattttacattttc 43329879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 1628273 - 1628210
Alignment:
Q  287 aaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||||||||||| |||||||||| ||||| || |||||  ||||||||||| |||| |||||    
T  1628273 aaaatttagtgacgaaattagagagggatttcacgttttccctctctaaatttccctcactaat 1628210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 10803795 - 10803716
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| ||||||| ||||||||| ||||||||||| ||||  |||| || |||||  || |||||||| |||||||||    
T  10803795 acaaatttcttggtcgcaaaatttaatgacggaattaaagaggaattttacgttttccctcactaaatttccctcgctaa 10803716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 10941725 - 10941772
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| |||||    
T  10941725 acaaattccttggtcgcaaaatttagtgatggaattagagagggattt 10941772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 18091607 - 18091654
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||||  |||||| |||||||||||||||||||||||||| |||||    
T  18091607 acaaattttttggtcgcaaaatttagtgacggaattagagagggattt 18091654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 18104590 - 18104637
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| | ||||| |||||||||||||||||||||||||| |||||    
T  18104590 acaaattccatggtcgcaaaatttagtgacggaattagagagggattt 18104637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 18539869 - 18539794
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  18539869 tggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 18539794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 28859666 - 28859619
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  28859666 acaaattccttggttgcaaaatttagtgacggaattagagagggattt 28859619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 31250163 - 31250116
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||| ||||||||||| |||||    
T  31250163 acaaatttcttggtcgcaaaatttagtgacagaattagagagggattt 31250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 37283598 - 37283551
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  37283598 acaaattccttggtcataaaatttagtgacggaattagagagggattt 37283551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 4393421 - 4393495
Alignment:
Q  281 ggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  4393421 ggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 4393495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 27711237 - 27711275
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  27711237 ttggtcgcaaaatttagtgacggaattagagagaaattt 27711275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 30219404 - 30219366
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  30219404 ttggtcgcaaaatttagtgacggaattagagagggattt 30219366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 46942554 - 46942496
Alignment:
Q  278 cttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaa 336  Q
    ||||||| |||||||||||||| ||||||||||| ||||| || |||||  ||||||||    
T  46942554 cttggtcgcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaa 46942496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 8110414 - 8110329
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||||  |||||||| ||||||||||||||||  |||| || |||||  || |||||||| |||| ||||| ||||    
T  8110414 acaaattccttggtcggaaaatttaatgacggaattagagaggaattttacgttttccctcactaaatttccctcactaatttttg 8110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 9652637 - 9652568
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  9652637 caaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 9652568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 11219197 - 11219128
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||| |||||||||||||||| ||||| || |||||  || | |||||| |||| ||||||||||    
T  11219197 caaaatttaatgacggaattagagagggatttcacgttttccctcacaaaattttcctcactaatatttg 11219128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 18380099 - 18380014
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||| ||  |||||||||||||||||||| |||| ||||| ||||||||  ||  ||||||| |||| ||||| ||||    
T  18380099 acaaatttcttgatcgtaaaatttagtgacggaattaaagagggattttacattttccctcattaaatttccctcactaatttttg 18380014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 27212857 - 27212926
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||||||||||||| |||| ||||| || ||||   ||||||||||| |||| ||||| ||||    
T  27212857 caaaatttagtgacggaattaaagagggatttcacgtttttcctctctaaatttccctcactaatttttg 27212926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 29704108 - 29704177
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||||||||||||| |||| ||||| || |||||| || | |||||| |||| ||||| ||||    
T  29704108 caaaatttagtgacggaattaaagagggatttcacgttttctctcacaaaatttccctcactaatttttg 29704177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 31433812 - 31433771
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| |||||||  |||||||||||||||||||||||||    
T  31433812 acaaattccttggtcgtaaaatttagtgacggaattagagag 31433771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 3461370 - 3461426
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| |||| || ||||||||| |||||||||||||||| ||||| || |||||    
T  3461370 acaaatttcttgatcgcaaaatttaatgacggaattagagagggattttacgttttc 3461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 5565797 - 5565741
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||||||||||  |||||||||| ||||| || |||||    
T  5565797 acaaatttcttggtcgcaaaatttagtgacataattagagagggatttcacgttttc 5565741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 6718785 - 6718729
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| ||||||||||||||||||||||| || ||||| || |||||    
T  6718785 acaaatttcatggtcgcaaaatttagtgacggaattagaaagggatttcacgttttc 6718729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 21020140 - 21020100
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| ||||||  |||||||||||||||||||||||||    
T  21020140 acaaattccttggttgcaaaatttagtgacggaattagaga 21020100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 1e-75; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 35933113 - 35933264
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35933113 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataatacaaactgaac 35933212  T
Q  124 atacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35933213 atacacacctcttttacatagtttaacaatactaaaacttccaataactacc 35933264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 47661933 - 47662085
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    |||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||||  ||||||||||||||| ||||||||||    
T  47661933 tgttgttacttgaacaagaaaacagttgcaggaaatgaacaagacagaggagaaataactgatttcattcatgaaattggtctgataatacaaactgaac 47662032  T
Q  124 atacac-acttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    | |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  47662033 acacacaacctcttttacatagtttaacaatactaaaacttccaataactacc 47662085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 22486473 - 22486388
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || ||||| ||| |||||||| |||| ||||| ||||    
T  22486473 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccgtcactaaatttccctcactaatttttg 22486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 3872247 - 3872303
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| || |||||    
T  3872247 acaaattccttggtctcaaaatttagtgacggaattagagagagattttacgttttc 3872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 816251 - 816336
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||  ||||||||||| |||| ||||| ||||    
T  816251 acaaattctttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccatctctaaattttcctcactaatttttg 816336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 10050896 - 10050981
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  10050896 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 10050981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 24605917 - 24605832
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||| || |||||  || |||||||| |||| ||||| ||||    
T  24605917 acaaattctttggtcgcaaaatttagtgacggaattagagagagatttcacgttttccctcactaaattttcctcactaatttttg 24605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 6849271 - 6849350
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||||| || ||||   || |||||||| |||||||||    
T  6849271 acaaattccttagtcgcaaaatttagtgacggaattagagagagattttacgttttacctcactaaatttccctcgctaa 6849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 23750796 - 23750875
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| |||||||  ||||||||||||||||||||||||| ||||| ||||||||  || |||||||| |||| ||||    
T  23750796 acaaattccttggtcgtaaaatttagtgacggaattagagagggattttacattttccctcactaaatttccctcactaa 23750875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 31042330 - 31042245
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||| ||||||||||| ||||| || |||||  |||||||| || |||| ||||| ||||    
T  31042330 acaaattccttggtcgcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcactaatttttg 31042245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 36636585 - 36636500
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  36636585 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttgcctcactaatttttg 36636500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 21917394 - 21917450
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  21917394 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 21917450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 23577249 - 23577329
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||| ||||||||||||||||||||||| || ||||| || |||||  || |||||||| |||| |||||    
T  23577249 acaaattccttggtcgcaaaatttagtgacggaattagatagggatttcacgttttccctcactaaatttccctcactaat 23577329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 2093439 - 2093478
Alignment:
Q  287 aaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  2093439 aaaatttagtgacggaattagagagagatttgacgttttc 2093478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 3904539 - 3904594
Alignment:
Q  271 caaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  3904539 caaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 3904594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 28800957 - 28800910
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  28800957 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattt 28800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 31425581 - 31425656
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  31425581 tggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 31425656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 1842973 - 1842899
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||||| ||||||| |||||||||||||||||||||| ||| ||||| || |||||  || |||||||| ||||    
T  1842973 acaaattccttggtcgcaaaatttagtgacggaattagggagggattttacgttttccctcactaaatttccctc 1842899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 1824260 - 1824301
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  1824260 acaaatttcttggtcgcaaaatttagtgacggaattagagag 1824301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 20174099 - 20174014
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  20174099 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 20174014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 22501657 - 22501588
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||| |||||||||||||||| ||||| || |||||  ||||||||||| |||| ||||| ||||    
T  22501657 caaaatttaatgacggaattagagagggatttcacgttttccctctctaaatttccctcactaatttttg 22501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 40847495 - 40847580
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  40847495 acaaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 40847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 2650888 - 2650944
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  2650888 acaaatttcatggtcgcaaaatttagtgacggaattagagagggattttacgttttc 2650944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 11036586 - 11036530
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  11036586 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 11036530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 21871647 - 21871607
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  21871647 acaaatttcttggtcgcaaaatttagtgacggaattagaga 21871607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 39979684 - 39979764
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||| ||||||||| |||||||||||||||| ||||| |  |||||  || |||||||| |||| |||||    
T  39979684 acaaattccttggtcgcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaatttccctcactaat 39979764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 45664847 - 45664791
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||| || |||||    
T  45664847 acaaattccttgatcgcaaaatttagtgacggaattagagagggattttacgttttc 45664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 7733372 - 7733419
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||| ||||||||||||||| |||||    
T  7733372 acaaattccttggtcgcaaaatttagagacggaattagagagggattt 7733419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 9698598 - 9698677
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| |||||||  |||||||||||||||||||||||||  |||| || |||||  || |||||||| |||| ||||    
T  9698598 acaaattccttggtcataaaatttagtgacggaattagagaggaattttacgttttccctcactaaatttccctcactaa 9698677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 15014465 - 15014512
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| |||||||||||||||||||||||||| |||||    
T  15014465 acaaattccttagtcgcaaaatttagtgacggaattagagagggattt 15014512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 15330265 - 15330312
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||| |||||||||||| ||||    
T  15330265 acaaatttcttggtcgcaaaatttagtgacagaattagagagaaattt 15330312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 18217908 - 18217861
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||||| |||||||||| |||||    
T  18217908 acaaattccttggtcgcaaaatttagtgacgaaattagagagggattt 18217861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 26577344 - 26577297
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| |||||    
T  26577344 acaaattccttggtcgcaaaatttagtgacggtattagagagggattt 26577297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 27806097 - 27806050
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  27806097 acaaattccttggtcgtaaaatttagtgacggaattagagagggattt 27806050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 42926480 - 42926527
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| |||||||||||||||||||||||||| |||||    
T  42926480 acaaatttcttagtcgcaaaatttagtgacggaattagagagggattt 42926527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 47523710 - 47523757
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||||  |||||| |||||||||||||||||||||||||| |||||    
T  47523710 acaaattctttggtcgcaaaatttagtgacggaattagagagggattt 47523757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 21623100 - 21623030
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||| | ||||||||||||| |||||||||||| ||||| || |||||  || |||||||||    
T  21623100 acaaattccttgggcgcaaaatttagtgatggaattagagagggattttacgttttccctcactaaattta 21623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 32267426 - 32267352
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||||| |||| || |||||||||||||| ||||||||||| |||||  | |||||  ||||||||||| ||||    
T  32267426 acaaatttcttgatcgcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaatttccctc 32267352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 38057711 - 38057637
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||||| ||||||| |||| |||||||||||||||| |||| ||||| || |||||  || |||||||| ||||    
T  38057711 acaaattccttggtcgcaaagtttagtgacggaattaaagagggatttcacgttttccctcgctaaatttccctc 38057637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 10222705 - 10222758
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    ||||||||| |||| ||||||||||| ||||| || |||||| |||||||||||    
T  10222705 caaaatttaatgacagaattagagagggattttacgttttctttctctaaattt 10222758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 20429544 - 20429459
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | |||||  ||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  20429544 acaaatttcatggtcgtaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 20429459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 27304949 - 27304908
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||| | ||||||||||||||||||||||||||    
T  27304949 acaaattccttggccgcaaaatttagtgacggaattagagag 27304908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 48933215 - 48933174
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  48933215 acaaattccatggtcgcaaaatttagtgacggaattagagag 48933174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 4514844 - 4514788
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| ||||||||||||| |||||||||||| ||||| | ||||||    
T  4514844 acaaattctttggtcgcaaaatttagtgaaggaattagagagggatttcatattttc 4514788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 11852087 - 11852047
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    |||||||  |||||| |||||||||||||||||||||||||    
T  11852087 acaaattctttggtcacaaaatttagtgacggaattagaga 11852047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 23699885 - 23699941
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||| |||||| |||| ||||| ||||||||    
T  23699885 acaaatttcatggtcgcaaaatttagtgacagaattaaagagggatttcacattttc 23699941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 37135362 - 37135430
Alignment:
Q  287 aaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  37135362 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 37135430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 1e-75; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 2798199 - 2798350
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2798199 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagacaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 2798298  T
Q  124 atacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2798299 atacacacctcttttacatagtttaacaatactaaaacttccaataactacc 2798350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 6839389 - 6839540
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6839389 tgttgttaattgaacaagaaaacagttgcagagaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctaataattcaaactgaac 6839488  T
Q  124 atacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6839489 atacacacctcttttacatagtttaacaatactaaaacttccaataactacc 6839540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 6831064 - 6831215
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6831064 tgttgttaattgaacatgaaaacagttgcagaaaatgaacaagacaaaggagaaataactgctttcattcatataattggtctgataatacaaactgaac 6831163  T
Q  124 atacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6831164 atacacacctcttttacatagtttaacaatactaaaacttccaataactacc 6831215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 11634475 - 11634325
Alignment:
Q  26 ttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaacat 125  Q
    |||||||||||||||||||| |||||||| | |||||||||| | |||||||||||||||||||||||| |||||||||||||| || |||||| |||||    
T  11634475 ttgttaattgaacaagaaaatagttgcaggatatgaacaagacagaggagaaataactgctttcattcaaataattggtctgatgatacaaactaaacat 11634376  T
Q  126 acac-acttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  11634375 acacaaccacttttacatagtttaacaatactaaaacttccaataactacc 11634325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 8978171 - 8978323
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    |||||||||||||||| ||||| |||||| | ||| |||||| | | |||||||||||||||||||| |||| ||||||||||||| ||| |||||||||    
T  8978171 tgttgttaattgaacaggaaaatagttgctggaaaagaacaaaatagaggagaaataactgctttcaatcatgtaattggtctgattattaaaactgaac 8978270  T
Q  124 atacac-acttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    ||| || |||| ||||||||||||| |||||||||||||||||||||||||||    
T  8978271 ataaacaactttttttacatagtttcacaatactaaaacttccaataactacc 8978323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 14478132 - 14478263
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgat---aattcaaactg 120  Q
    ||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||   ||  |||||||    
T  14478132 tgttgttaactaaacaagaaaacagttgcaggaaatgaacaagacaaaggagaaataactgctttcattcatgtaatttgtctgatgaaaaaacaaactg 14478231  T
Q  121 aacatacacacttcttttacatagtttaacaat 153  Q
    |||||||| || |||||||||||||||||||||    
T  14478232 aacataca-acctcttttacatagtttaacaat 14478263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 29404914 - 29404769
Alignment:
Q  27 tgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaacata 126  Q
    |||||| |||||||||||| |||||| | ||||||||| || | |||||||||||||||||| |||||| |||  |||||||| |   |||||||||  |    
T  29404914 tgttaactgaacaagaaaatagttgctggaaatgaacacgacagaggagaaataactgctttgattcatgtaaccggtctgat-acaaaaactgaactga 29404816  T
Q  127 ca-cacttcttttacatagtttaacaatactaaaacttccaataact 172  Q
    ||  || | ||||||||||||| | | ||||||||||||||||||||    
T  29404815 cataacatattttacatagtttcatagtactaaaacttccaataact 29404769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 9259243 - 9259328
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||| || |||||  || | |||||| |||| ||||||||||    
T  9259243 acaaatttcatggtcgcaaaatttagtgacggaattagagagagatttcacgttttccctcacaaaatttccctcactaatatttg 9259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 38531230 - 38531310
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||| ||| ||||||||||||| |||||||||||||||||| || |||||  ||||||||||| |||| |||||    
T  38531230 acaaattccttagtcgcaaaatttagtgatggaattagagagagatttcacgttttccctctctaaatttccctcactaat 38531310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 4340486 - 4340416
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  4340486 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 4340416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 41120797 - 41120867
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  41120797 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 41120867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 13102395 - 13102310
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||||| |  |||||  || |||||||| |||| ||||| ||||    
T  13102395 acaaattccttggtcgcaaaatttagtgacggaattagaaagagattttatgttttccctcactaaatttccctcactaatttttg 13102310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 13523021 - 13523106
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||  |||||||| || |||| ||||| ||||    
T  13523021 acaaattctttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaaattccctcactaatttttg 13523106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 14486708 - 14486777
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||||||||||||||||||||| || |||||  ||||||||||| |||| ||||| ||||    
T  14486708 caaaattcagtgacggaattagagagagatttcacgttttccctctctaaattttcctcactaatttttg 14486777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 22789651 - 22789736
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||| |||||||| |||||||| || |||||  ||||||||||| |||| ||||| ||||    
T  22789651 acaaattccatggtcgcaaaatttagtgactgaattagatagagatttcacgttttccctctctaaatttccctcactaatttttg 22789736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 41071895 - 41071980
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  41071895 acaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 41071980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 32046955 - 32046899
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||| || |||||    
T  32046955 acaaatttcttggtcgcaaaatttagtgtcggaattagagagagattttacgttttc 32046899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 6459296 - 6459249
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  6459296 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 6459249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 9110035 - 9110082
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  9110035 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattt 9110082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 12720888 - 12720841
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  12720888 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 12720841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 19865323 - 19865276
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19865323 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 19865276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 41752512 - 41752465
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  41752512 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 41752465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 45839371 - 45839324
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  45839371 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 45839324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 46339505 - 46339552
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  46339505 acaaattccttagtcgcaaaatttagtgacggaattagagagagattt 46339552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 50845390 - 50845437
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  50845390 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 50845437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 51973493 - 51973418
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||||  || | |||||| ||||  |||||||||    
T  51973493 tggtcgcaaaatttagtgacggaattagagagaaatttcacattttccctcacaaaatttccctcattaatatttg 51973418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 9464182 - 9464097
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  9464182 acaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 9464097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 11917865 - 11917780
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||| |||||| ||||||||||||||||||||||| || || || || |||||  |||||||| ||| ||| ||||| ||||    
T  11917865 acaaattatttggtcgcaaaatttagtgacggaattagaaagggagttcacgttttccctctctaaacttatctcactaatttttg 11917780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 12161893 - 12161808
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  12161893 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 12161808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 15243164 - 15243079
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||| || ||||||||||||||||||||||| || ||||| || |||||  || |||||||| |||| ||||| ||||    
T  15243164 acaaattccttgatcgcaaaatttagtgacggaattagatagggatttcacgttttccctcactaaatttccctcactaatttttg 15243079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 19081807 - 19081722
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||||  ||||||||||||| ||||||||||| ||||| || |||||  |||||||| || |||| ||||| ||||    
T  19081807 acaaattccttggtcgtaaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcactaatttttg 19081722  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 19129695 - 19129610
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||||  ||||||||||||| ||||||||||| ||||| || |||||  |||||||| || |||| ||||| ||||    
T  19129695 acaaattccttggtcgtaaaatttagtgacagaattagagagggatttcacgttttccctctctaaaattccctcactaatttttg 19129610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 22158881 - 22158796
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  22158881 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 22158796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 22603611 - 22603542
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  22603611 caaaatttagtgacggaattagagagcgattttacgttttccctcactaaatttccctcactaatttttg 22603542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 23457976 - 23457891
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  23457976 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 23457891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 52183757 - 52183672
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  52183757 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 52183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 28229515 - 28229571
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| ||||| || |||||    
T  28229515 acaaattccttggtcgcaaaatttagtgatggaattagagagggattttacgttttc 28229571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 6412113 - 6412160
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||||||||||| |||| |||||    
T  6412113 acaaatttcttggtcgcaaaatttagtgacggaattaaagagggattt 6412160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 25788057 - 25788104
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| | ||||| |||||||||||||||||||||||||| |||||    
T  25788057 acaaattccatggtcgcaaaatttagtgacggaattagagagggattt 25788104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 317
Target Start/End: Complemental strand, 41063260 - 41063229
Alignment:
Q  286 caaaatttagtgacggaattagagagagattt 317  Q
    ||||||||||||||||||||||||||||||||    
T  41063260 caaaatttagtgacggaattagagagagattt 41063229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 41359067 - 41359020
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||||  |||||| |||||||||||||||||||||||||| |||||    
T  41359067 acaaattctttggtcgcaaaatttagtgacggaattagagagggattt 41359020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 7181625 - 7181671
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  7181625 tggtcacaaaatttagtgacggaattagagagggatttcacgttttc 7181671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 13195646 - 13195588
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    |||||||||||||| ||||||||||| |||||  |||||||  ||||||||||| ||||    
T  13195646 caaaatttagtgacagaattagagagggattttgcattttccctctctaaatttccctc 13195588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 350
Target Start/End: Original strand, 18890619 - 18890689
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||| ||||||||||| |||||||||||||| ||||| || |||||| || | |||||| |||| |||||    
T  18890619 tggtcgcaaaatttagtaacggaattagagagggatttcacgttttctctcacaaaatttccctcactaat 18890689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 46786026 - 46786088
Alignment:
Q  278 cttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||||| |||||||||||||||| ||||| || |||||  || |||||||||    
T  46786026 cttggtcgcaaaatttaatgacggaattagagagggattttacgttttccctcactaaattta 46786088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 14760946 - 14760861
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||| ||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  14760946 acaaattctttggtcgcaaaatttagtgacggaattagtgagggatttcatgttttccctcactaaatttccctcactaatttttg 14760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 20408220 - 20408305
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| ||||||||||| |||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  20408220 acaaattccatggtcgcaaaatttagtaacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 20408305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 29549479 - 29549418
Alignment:
Q  288 aaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    |||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||    
T  29549479 aaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 29549418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 30928436 - 30928485
Alignment:
Q  268 taacaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||||| ||||||| |||||||||||||  |||||||||||| ||||    
T  30928436 taacaaattccttggtcgcaaaatttagtgagagaattagagagaaattt 30928485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 7830110 - 7830030
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||| ||||||||||||||| |||||| ||| ||||| |  |||||  || |||||||| |||| |||||    
T  7830110 acaaattccttggtcgcaaaatttagtgacgaaattagggagggatttcatgttttccctcactaaatttccctcactaat 7830030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 12174826 - 12174866
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  12174826 acaaattccttcgtcgcaaaatttagtgacggaattagaga 12174866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 18894969 - 18895045
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||| ||||||||||||||| |||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  18894969 ttggtcgcaaaatttagtgacgaaattagagagggatttcatgttttccctcactaaattttcctcactaatttttg 18895045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 27253915 - 27253955
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| | ||||| |||||||||||||||||||||||||    
T  27253915 acaaattccatggtcgcaaaatttagtgacggaattagaga 27253955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 29093630 - 29093694
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||||| ||| ||||||||||||  |||| ||||||||  ||||||||||| |||| |||||    
T  29093630 caaaatttaatgatggaattagagaggaattttacattttccatctctaaatttccctcactaat 29093694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 3e-73; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 32525190 - 32525039
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32525190 tgttgttaattgaacaagaaaacagttgcagataatgaacaagaaaaaggagaaataactgctttcattcatataattggtctaataattcaaactgaac 32525091  T
Q  124 atacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32525090 atacacacctcttttacatagtttaacaatactaaaacttccaataactacc 32525039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 32529390 - 32529238
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32529390 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctaataattcaaactgaac 32529291  T
Q  124 at-acacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    || |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32529290 ataacacacctcttttacatagtttaacaatactaaaacttccaataactacc 32529238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 26345593 - 26345444
Alignment:
Q  26 ttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaacat 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  26345593 ttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaagaagaaataactgctttcattcatataattggtctgataatacaaactaaacat 26345494  T
Q  126 acacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26345493 acacacctcttttacatagtttaacaatactaaaactttcaataactacc 26345444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 44981031 - 44980880
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44981031 tgttgttaattgaacaagaaaacagttgcaggaaatgaacaagacagaggagaaataactgctttcattcatataattggtctgataatacaaactgaac 44980932  T
Q  124 atacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    | |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  44980931 acacacacctcttttacatagtttagcaatactaaaacttccaataactacc 44980880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 271 - 408
Target Start/End: Original strand, 6084305 - 6084443
Alignment:
Q  271 caaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatt-tgnnnnnnnagtagtg 369  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |        |||||||    
T  6084305 caaattccttggtctaaaaatttagtgacggaattagagagagatttgacattttcagtctctaaatttacctcgctaatattatttttttttagtagtg 6084404  T
Q  370 gaaccttgctatagttttatcatttttaaaacattgctt 408  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6084405 gaaccttgctatagttttatcatttttaaaacattgctt 6084443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 6817131 - 6817046
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||  || |||||||| |||| ||||| ||||    
T  6817131 acaaatttcttggtcacaaaatttagtgacggaattagagagagattttacattttccctcactaaatttccctcactaatttttg 6817046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 30688013 - 30687944
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||  || ||||||||    
T  30688013 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacattttccttcactaaattt 30687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 23752346 - 23752402
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  23752346 acaaattccttggtcgcaaaatttagtgacggaattagagagtgattttacattttc 23752402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 24576084 - 24576131
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  24576084 acaaattccttggtcgcaaaatttagtgacggaattagagagagattt 24576131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 5670229 - 5670299
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  5670229 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 5670299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 11938822 - 11938752
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  11938822 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 11938752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 19256289 - 19256219
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  19256289 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 19256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 3823210 - 3823125
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  3823210 acaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 3823125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 32961736 - 32961651
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||| |||||||||||||||||||||  |||| ||||||||  || |||||||| |||| ||||| ||||    
T  32961736 acaaatttcttggtcgcaaagtttagtgacggaattagagaggaattttacattttccctcactaaatttccctcactaatttttg 32961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 30467016 - 30467084
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||| || |||||  || |||||||||    
T  30467016 aaatttcttggtcgcaaaatttagtgatggaattagagagagattttacgttttccctcactaaattta 30467084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 8555364 - 8555411
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||    
T  8555364 acaaattctttggtcgcaaaatttagtgacggaattagagagagattt 8555411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 22939390 - 22939343
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  22939390 acaaattcctttgtcgcaaaatttagtgacggaattagagagagattt 22939343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 24193256 - 24193303
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  24193256 acaaatttcatggtcgcaaaatttagtgacggaattagagagagattt 24193303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 27869315 - 27869268
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||    
T  27869315 acaaattctttggtcgcaaaatttagtgacggaattagagagagattt 27869268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 31344234 - 31344317
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| |||| || ||||||||| ||||||||||||||||  |||| ||||||||  |||||||| || |||| ||||||||||    
T  31344234 aaatttcttgatcgcaaaatttaatgacggaattagagaggaatttcacattttccctctctaaaattccctcactaatatttg 31344317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 24636729 - 24636659
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  24636729 acaaatttcttgatcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 24636659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 8789917 - 8789876
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  8789917 acaaattccttggtcgcaaaatttagtgacggaattagagag 8789876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 17103925 - 17104010
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  17103925 acaaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 17104010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 19240944 - 19240903
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  19240944 acaaattccttggtcgcaaaatttagtgacggaattagagag 19240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 19314128 - 19314087
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  19314128 acaaattccttggtcgcaaaatttagtgacggaattagagag 19314087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 19488121 - 19488162
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  19488121 acaaattccttggtcgcaaaatttagtgacggaattagagag 19488162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 21350555 - 21350470
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||  ||||| || ||||   || |||||||| |||| ||||| ||||    
T  21350555 acaaattccttggtcgcaaaatttagtgacggaattagagatggattttacgtttttcctcactaaatttccctcactaatttttg 21350470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 37992160 - 37992091
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||||||||||||||||||||||||||| |  |||||  || |||||||| |||| ||||| ||||    
T  37992160 caaaatttagtgacggaattagagagagatttcatgttttccctcactaaattttcctcactaatttttg 37992091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 40289481 - 40289565
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||| ||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  40289481 acaaattccttggtcgcaaaatttagtgacggaattag-gagggattttacgttttccctcactaaatttccctcactaatttttg 40289565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 4647831 - 4647871
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  4647831 caaaatttagtgacggaattagagagggatttcacattttc 4647871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 17824676 - 17824756
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| |||||    
T  17824676 acaaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaat 17824756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 26399067 - 26399123
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||    
T  26399067 acaaattcgttggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 26399123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 43431619 - 43431699
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||  ||||||||||||||| |||||||||| ||||| || |||||  || |||||||| |||| |||||    
T  43431619 acaaattccttggttgcaaaatttagtgacgaaattagagagggattttacgttttccctcactaaatttccctcactaat 43431699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 325
Target Start/End: Complemental strand, 8824886 - 8824847
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacatttt 325  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  8824886 caaaatttagtgacggaattagagagggattttacatttt 8824847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 17810375 - 17810328
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||||| |||||||||| |||||    
T  17810375 acaaatttcttggtcgcaaaatttagtgacgaaattagagagggattt 17810328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 18010120 - 18010167
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| |||| || |||||||||||||||||||||||||| |||||    
T  18010120 acaaattccttgatcgcaaaatttagtgacggaattagagagggattt 18010167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 19493715 - 19493762
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||||  |||||| |||||||||||||||||||||||||| |||||    
T  19493715 acaaattctttggtcgcaaaatttagtgacggaattagagagggattt 19493762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 27910824 - 27910871
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| |||||||||||||||||||||||||| |||||    
T  27910824 acaaattccttagtcacaaaatttagtgacggaattagagagggattt 27910871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 27957243 - 27957290
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| |||||||||||||||||||||||||| |||||    
T  27957243 acaaattccttagtcacaaaatttagtgacggaattagagagggattt 27957290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 29345132 - 29345074
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    |||||||||||||||||||||| ||| ||||| || |||||  ||||||||||| ||||    
T  29345132 caaaatttagtgacggaattagggagggatttcacgttttccctctctaaatttccctc 29345074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 32247976 - 32247930
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  32247976 tggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 32247930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 4331055 - 4331014
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  4331055 acaaattccatggtcgcaaaatttagtgacggaattagagag 4331014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 5879281 - 5879240
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| |||||||  |||||||||||||||||||||||||    
T  5879281 acaaatttcttggtcgtaaaatttagtgacggaattagagag 5879240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 25273387 - 25273443
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| |||||||||||||| ||||||||||| ||||| || |||||    
T  25273387 acaaattctttggtcgcaaaatttagtgacagaattagagagggattttacgttttc 25273443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 31399568 - 31399608
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| | ||||| |||||||||||||||||||||||||    
T  31399568 acaaattccatggtcgcaaaatttagtgacggaattagaga 31399608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 273
Target Start/End: Complemental strand, 32524967 - 32524939
Alignment:
Q  245 tcagcagtcctaagcatgatatttaacaa 273  Q
    |||||||||||||||||||||||||||||    
T  32524967 tcagcagtcctaagcatgatatttaacaa 32524939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 33413046 - 33413086
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||||||||||||||||||||| ||||| || |||||    
T  33413046 caaaatttagtgacggaattagagagggattttacgttttc 33413086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 33652644 - 33652604
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| ||||||| ||||||||||||||||| |||||||    
T  33652644 acaaattccttggtcgcaaaatttagtgacggagttagaga 33652604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 28395169 - 28395025
Alignment:
Q  31 aattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaacatacaca 130  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28395169 aattgaacaagaaaacagttgcagaaaatgaacaagacaaaggagaaataactgctttcattcatataattggtctgataatacaaactgaacatacaca 28395070  T
Q  131 cttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    | |||||||||||| ||||||||||||||||||||||||||||||    
T  28395069 cctcttttacatagattaacaatactaaaacttccaataactacc 28395025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 271 - 355
Target Start/End: Original strand, 30269049 - 30269133
Alignment:
Q  271 caaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||  || |||||||| |||| ||||| ||||    
T  30269049 caaattatttggtcgcaaaatttagtgacggaattagagagagattttacattttccctcgctaaatttccctcactaatttttg 30269133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 271 - 355
Target Start/End: Complemental strand, 30283140 - 30283056
Alignment:
Q  271 caaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||  || |||||||| |||| ||||| ||||    
T  30283140 caaattatttggtcgcaaaatttagtgacggaattagagagagattttacattttccctcgctaaatttccctcactaatttttg 30283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 19839256 - 19839171
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||||||||| ||||    
T  19839256 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattttcctcgctaatttttg 19839171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 55309273 - 55309358
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  55309273 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 55309358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 30508064 - 30508008
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  30508064 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacattttc 30508008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 18714979 - 18714932
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  18714979 acaaattccttggtctcaaaatttagtgacggaattagagagggattt 18714932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 32175797 - 32175876
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||    
T  32175797 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 32175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 13028876 - 13028946
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  13028876 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 13028946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 25026634 - 25026564
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||||| || |||||  || |||||||||    
T  25026634 acaaattccttagtcgcaaaatttagtgacggaattagagagagattttacgttttccctcactaaattta 25026564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 22128372 - 22128457
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||| ||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  22128372 acaaattccttggtcgcaaaatttagtgacagaattagagagggatttcacgttttccctcactaaatttccctcactaatttttg 22128457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 27040085 - 27040170
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||||||||    
T  27040085 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatatttg 27040170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 9238685 - 9238741
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||| || |||||    
T  9238685 acaaatttcttggtcgcaaaatttagtgacggaattagagagaaattttacgttttc 9238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 14944823 - 14944767
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  14944823 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 14944767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 22156661 - 22156708
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  22156661 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 22156708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 350
Target Start/End: Complemental strand, 36689745 - 36689674
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||| |||||||||||||||||||||||||| ||||| || |||||   | |||||||| ||||||||||    
T  36689745 ttggtcgcaaaatttagtgacggaattagagagggatttcacgttttcccacactaaatttccctcgctaat 36689674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 4627138 - 4627208
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| |||| ||  |||||||||||||| |||||||||||||||| ||||||||  || |||||||||    
T  4627138 acaaatttcttgatcgtaaaatttagtgacgaaattagagagagattttacattttccctcactaaattta 4627208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 38223587 - 38223513
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||||| ||||||| |||||||||||||| ||||||||||| |||||  | |||||  ||||||||||| ||||    
T  38223587 acaaattccttggtcgcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaatttccctc 38223513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 5399686 - 5399601
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||  |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  5399686 acaaattccttggttgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 5399601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 9670539 - 9670580
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  9670539 acaaattccttggtcgcaaaatttagtgacggaattagagag 9670580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 25147798 - 25147713
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  25147798 acaaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 25147713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 46286289 - 46286374
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  46286289 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 46286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 4606889 - 4606945
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||| | |||||||||||||||||||||||||| ||||| || |||||    
T  4606889 acaaatttcttggccgcaaaatttagtgacggaattagagagtgatttcactttttc 4606945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 5473923 - 5473847
Alignment:
Q  273 aattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    |||| ||||||| ||||||||||||||||||||| |||| ||||| || |||||  || |||||||| |||| ||||    
T  5473923 aattccttggtcgcaaaatttagtgacggaattaaagagggattttacgttttccctcactaaattttcctcactaa 5473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 7112006 - 7112062
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| |||||||  |||||||||||||||||||| |||| ||||| ||||||||    
T  7112006 acaaatttcttggtcgaaaaatttagtgacggaattatagagggattttacattttc 7112062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 19680484 - 19680540
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  19680484 acaaatttcatggtcgcaaaatttagtgacggaattagagagggattttacgttttc 19680540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 37761912 - 37761976
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| ||||    
T  37761912 tggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattttcctc 37761976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 2275738 - 2275785
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| |||| || |||||||||||||||||||||||||| |||||    
T  2275738 acaaattccttgatcgcaaaatttagtgacggaattagagagggattt 2275785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 9059012 - 9059059
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||| |||||||||||||||| |||||    
T  9059012 acaaattccttggtcgcaaaatttaatgacggaattagagagggattt 9059059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 13564975 - 13565054
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| |||||||  |||||||||||||||||||||||||  |||| || |||||  || |||||||| |||| ||||    
T  13564975 acaaattccttggtcataaaatttagtgacggaattagagaggaattttacgttttccctcactaaatttccctcactaa 13565054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 37378683 - 37378730
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| | ||||| |||||||||||||||||||||||||| |||||    
T  37378683 acaaattccatggtcgcaaaatttagtgacggaattagagagggattt 37378730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 42055474 - 42055419
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacatttt 325  Q
    ||||||| ||||||| ||||||||||| |||||||||| ||| ||||| |||||||    
T  42055474 acaaattccttggtcgcaaaatttagtaacggaattagtgagtgattttacatttt 42055419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 45532639 - 45532718
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| |||| || ||||||||| |||||||||||||||| ||||| || |||||  || |||||||| |||| ||||    
T  45532639 acaaatttcttgatcgcaaaatttaatgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 45532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 4586818 - 4586888
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| |||| ||  ||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  4586818 acaaattccttgatcgtaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 4586888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 9913327 - 9913269
Alignment:
Q  278 cttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaa 336  Q
    ||||||| |||||||||||||| ||||||||||| ||||| || |||||  ||||||||    
T  9913327 cttggtcgcaaaatttagtgacagaattagagagggatttcacgttttccctctctaaa 9913269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 18051905 - 18051831
Alignment:
Q  281 ggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  18051905 ggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 18051831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 33914127 - 33914089
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  33914127 ttggtcgcaaaatttagtgacggaattagagagggattt 33914089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 12072037 - 12071992
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||| |||| || |||||||||||||||||||||||||| |||||    
T  12072037 aaattccttgatcgcaaaatttagtgacggaattagagagggattt 12071992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 16915446 - 16915377
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    |||||||  |||||| ||||||||||||||  |||||||||||||||| | ||||||  || ||||||||    
T  16915446 acaaatttgttggtcgcaaaatttagtgacaaaattagagagagatttcatattttccctcactaaattt 16915377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 18744130 - 18744215
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | |||||  ||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  18744130 acaaatttcatggtcataaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 18744215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 34557260 - 34557191
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    ||||||| ||||||| ||||||||| ||||||||||| ||| |||||| || |||||  || ||||||||    
T  34557260 acaaattccttggtcacaaaatttaatgacggaattaaagacagattttaccttttccctcgctaaattt 34557191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 9239341 - 9239397
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||| | |||||||||||||||| ||||| || |||||    
T  9239341 acaaattccttggtcgcaaaattgaatgacggaattagagagggatttcacgttttc 9239397  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 29625386 - 29625346
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||||||||||||||||||||| ||||| || |||||    
T  29625386 caaaatttagtgacggaattagagagggatttcacgttttc 29625346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 38645827 - 38645771
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| ||||||||||||||||| |||||||| ||||| || |||||    
T  38645827 acaaattctttggtcgcaaaatttagtgacggagttagagagggattttacgttttc 38645771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 16413 - 16261
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctgataattcaaactgaac 123  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16413 tgttgttaattgaacaagaaaacagttgcaggaaatgaacaagacagaggagaaataactgctttcattcatataattggtctgataatacaaactgaac 16314  T
Q  124 atacacacttctt-ttacatagtttaacaatactaaaacttccaataactacc 175  Q
    | |||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  16313 acacacacctcttcttacatagtttagcaatactaaaacttccaataactacc 16261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 43166033 - 43166186
Alignment:
Q  24 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagaaaaaggagaaataactgctttcattcatataattggtctg--ataattcaaactga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | ||   |||||||    
T  43166033 tgttgttaattgaacaagaaaacagttgcagaaaatgaacaagacaaaggagaaataactgctttcattcatataattggtctgaaaaaaacaaaactga 43166132  T
Q  122 acatacacacttcttttacatagtttaacaatactaaaacttccaataactacc 175  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  43166133 acatacacacctcttttacatagtttgacaatactaaaacttccaataactacc 43166186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 13788115 - 13788200
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| ||||||||||||||| |||||||||| ||||| ||||||||  || |||||||| |||| ||||| ||||    
T  13788115 acaaattccttggtcgcaaaatttagtgacgaaattagagagggattttacattttccctcactaaattttcctcactaatttttg 13788200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 44476435 - 44476491
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||    
T  44476435 acaaattccttggtcgcaaaatttagtgacggaattagagagagattttacgttttc 44476491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 14757181 - 14757228
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  14757181 acaaatttcttggtcgcaaaatttagtgacggaattagagagagattt 14757228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 22140424 - 22140509
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||| || | |||||| |||| ||||| ||||    
T  22140424 acaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttctttcacaaaatttccctcactaatttttg 22140509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 31266429 - 31266344
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  31266429 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcgctaaatttccctcactaatttttg 31266344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 41637693 - 41637608
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  41637693 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaattttcctcactaatttttg 41637608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 41736247 - 41736162
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||| || ||||||||||||||| |||||||||| ||||| ||||||||  || |||||||| |||| ||||| ||||    
T  41736247 acaaattccttgatcgcaaaatttagtgacgaaattagagagggattttacattttccctcactaaattttcctcactaatttttg 41736162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 32009027 - 32008971
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  32009027 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 32008971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 43408571 - 43408627
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  43408571 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 43408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 28841402 - 28841449
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  28841402 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 28841449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 37802447 - 37802518
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||| |||||||||||||||||||||||||  ||||| || |||||  ||||||||||| |||| |||||    
T  37802447 ttggtcgcaaaatttagtgacggaattagagactgattttacgttttccctctctaaatttccctcactaat 37802518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 44723007 - 44722940
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaat 337  Q
    ||||||| ||| ||| |||||||||||||||||||||||||| ||||| | ||||||| || ||||||    
T  44723007 acaaattccttagtcgcaaaatttagtgacggaattagagagggatttcatattttctctcactaaat 44722940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 23858017 - 23858087
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||  ||||| || |||||  || |||||||||    
T  23858017 acaaattccttggtcgcaaaatttagtgacggaattagagaatgattttacgttttccctcactaaattta 23858087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 37552302 - 37552232
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    |||||||  |||||| ||||||||| |||||||||||||||| ||||| ||||||||  || |||||||||    
T  37552302 acaaattctttggtcgcaaaatttaatgacggaattagagagggattttacattttccctcactaaattta 37552232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 2556170 - 2556085
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||   |||||||||||||||||||||||| | |||| ||||||||  |||||||| || |||| ||||| ||||    
T  2556170 acaaatttcttggttgtaaaatttagtgacggaattagagaaaaatttcacattttccctctctaaaattccctcactaatttttg 2556085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 9004384 - 9004453
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||||| ||||||||||||| |||| ||||||||  || |||||||| |||| ||||| ||||    
T  9004384 caaaatttagtgatggaattagagagaaattttacattttccctcactaaatttccctcactaatttttg 9004453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 21293771 - 21293856
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||||| || |||||  || | |||||| |||| ||||| ||||    
T  21293771 acaaattccatggtcgtaaaatttagtgacggaattagagagagatttcacgttttccctcacaaaatttccctcactaatttttg 21293856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 27523084 - 27523039
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||    
T  27523084 aaattccttggtcgcaaaatttagtgacggaattagagagggattt 27523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 29749463 - 29749548
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||| ||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  29749463 acaaatttcttggtcgcaaaatttagtgacggaattagggagggatttcatgttttccctcactaaattttcctcactaatttttg 29749548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 30783413 - 30783328
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  30783413 acaaattcattggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 30783328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 32300526 - 32300441
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  32300526 acaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 32300441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 13613153 - 13613209
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||    
T  13613153 acaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 13613209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 23388438 - 23388494
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  23388438 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 23388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 28262439 - 28262383
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  28262439 acaaatttcatggtcacaaaatttagtgacggaattagagagggatttcacgttttc 28262383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 28319639 - 28319695
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  28319639 acaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 28319695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 1141611 - 1141526
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||| ||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  1141611 acaaatttcatggtcgcaaaatttagtgacagaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 1141526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 15636795 - 15636880
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| ||||||||||||||| |||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  15636795 acaaatttcatggtcgcaaaatttagtgacgaaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 15636880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 26687751 - 26687820
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    ||||||| ||||||  |||||||||||||||||||||||||  ||||| |  ||||| ||| ||||||||    
T  26687751 acaaattccttggttgcaaaatttagtgacggaattagagatggatttcatgttttccgtcactaaattt 26687820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 35697530 - 35697489
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    |||||||  |||||| ||||||||||||||||||||||||||    
T  35697530 acaaattttttggtcgcaaaatttagtgacggaattagagag 35697489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 8430354 - 8430286
Alignment:
Q  287 aaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  8430354 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 8430286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 29998635 - 29998699
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||||||||||||||||||||||  ||||| || |||||  |||||||| || |||| |||||    
T  29998635 caaaatttagtgacggaattagagaaggatttcacgttttccttctctaaaattccctcactaat 29998699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 32185890 - 32185822
Alignment:
Q  287 aaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  32185890 aaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 32185822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 8886911 - 8886996
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||  || |||||||| |||| ||||| ||||    
T  8886911 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacattttccctcactaaatttccctcactaatttttg 8886996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 11927846 - 11927931
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||| ||| |||||||||||||||||||||||||| ||||| || ||||| ||||||||| || |||| ||||| ||||    
T  11927846 acaaattacttcgtcgcaaaatttagtgacggaattagagagggatttcacgttttccgtctctaaaattccctcactaatttttg 11927931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 32726786 - 32726855
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattt 339  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||  |||||||||||    
T  32726786 acaaattccttggtcgcaaaatttagtgacggaattagagagaaatttcacattttccctctctaaattt 32726855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 24138901 - 24138971
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| || |||||  || |||||||||    
T  24138901 acaaattgcttggtcgcaaaatttagtgacggaattagagagagattttacgttttccctcactaaattta 24138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 17079484 - 17079399
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||||  |||||  | ||||||||| |||| ||||| ||||    
T  17079484 acaaatttcttggtcgcaaaatttagtgacggaattagagagggatttgatgttttccctttctaaatttccctcactaatttttg 17079399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 4125248 - 4125304
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4125248 acaaatttcatggtcgcaaaatttagtgacggaattagagagagatttcacattttc 4125304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 20959587 - 20959507
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||| |||  ||||||||||||||||||||||||||||||| || |||||  ||||||||||| |||| |||||    
T  20959587 acaaattccttagtcgtaaaatttagtgacggaattagagagagatttcacgttttccctctctaaatttccctcactaat 20959507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 27428081 - 27428152
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||| |||||||||||||||||||||||||| ||||| || |||||  ||||||||||| |||| |||||    
T  27428081 ttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaattttcctcactaat 27428152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 36831952 - 36832035
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||| ||||||||  || |||||||| |||| ||||| ||||    
T  36831952 aaattccttggtcacaaaatttagtgatggaattagagagggattttacattttccctcactaaatttccctcactaatttttg 36832035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 33818621 - 33818706
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  33818621 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 33818706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 746928 - 746984
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  746928 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 746984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 10494816 - 10494760
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  10494816 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 10494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 16631934 - 16631990
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  16631934 acaaattccttggtcacaaaatttagtgacggaattagagagggattttacgttttc 16631990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 17039691 - 17039747
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  17039691 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 17039747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 618373 - 618326
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  618373 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 618326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 16121899 - 16121946
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  16121899 acaaattccttggtcacaaaatttagtgacggaattagagagggattt 16121946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 349
Target Start/End: Complemental strand, 23409059 - 23408980
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||    
T  23409059 acaaatttcttgatcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 23408980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 25673288 - 25673367
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    |||||||  |||||| ||||||| |||||||||||||||||| ||||| |  ||||||||| |||||||| |||| ||||    
T  25673288 acaaattctttggtcgcaaaattcagtgacggaattagagagggatttcatgttttctgtcactaaatttccctcactaa 25673367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 36196463 - 36196388
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||  || | |||||| |||| ||||| ||||    
T  36196463 tggtcgcaaaatttagtgacggaattagagagggatttcacattttccctcacaaaatttccctcactaatttttg 36196388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 25652643 - 25652717
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||||| ||| ||| |||||||| ||||||||||||||||| ||||| ||||||||  || |||||||| ||||    
T  25652643 acaaattccttagtcgcaaaattttgtgacggaattagagagggattttacattttccctcactaaatttccctc 25652717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 26708645 - 26708715
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  |||| || |||||  || |||||||||    
T  26708645 acaaattccttggtcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaattta 26708715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 26978379 - 26978449
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  |||| || |||||  || |||||||||    
T  26978379 acaaattccttggtcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaattta 26978449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 40484121 - 40484067
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  40484121 aaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 40484067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 7888876 - 7888791
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||||  |||||||||||||||| |||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  7888876 acaaattccttggtcgtaaaatttagtgacggagttagagagggattttacgttttccctcactaaattttcctcactaatttttg 7888791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 12045806 - 12045721
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||||  ||||||||||||||||||||||||  ||||| || |||||  || |||||||| |||| ||||| ||||    
T  12045806 acaaatttcttggtcgtaaaatttagtgacggaattagagaaggattttacgttttccctcactaaatttccctcactaatttttg 12045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 17772030 - 17772075
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||    
T  17772030 aaattccttgatcgcaaaatttagtgacggaattagagagagattt 17772075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 31853158 - 31853195
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  31853158 tggtcgcaaaatttagtgacggaattagagagagattt 31853195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 17036472 - 17036540
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatt 338  Q
    ||||||| ||||||| |||||||||||||| ||||||||||| |||||  | |||||  ||||||||||    
T  17036472 acaaattccttggtcgcaaaatttagtgacagaattagagagggattttgcgttttccctctctaaatt 17036540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 23975714 - 23975658
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  23975714 acaaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 23975658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 35620403 - 35620443
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  35620403 acaaattccttggtcgcaaaatttagtgacggaattagaga 35620443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 38837731 - 38837787
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| ||||| || |||||    
T  38837731 acaaattccttggtcgcaaaatttagtgatggaattagagagggattttacgttttc 38837787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 2472774 - 2472821
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||| |||||||||||||||| |||||    
T  2472774 acaaattccttggtcgcaaaatttaatgacggaattagagagggattt 2472821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 5982724 - 5982677
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||| ||||||||||||||||||||| |||||    
T  5982724 acaaattccttggtcgcaaagtttagtgacggaattagagagggattt 5982677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 15061052 - 15061005
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| | ||||| |||||||||||||||||||||||||| |||||    
T  15061052 acaaatttcatggtcgcaaaatttagtgacggaattagagagggattt 15061005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 23423816 - 23423863
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  23423816 acaaattccttggttgcaaaatttagtgacggaattagagagggattt 23423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 25397848 - 25397895
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||||  |||||| |||||||||||||||||||||||||| |||||    
T  25397848 acaaattctttggtcgcaaaatttagtgacggaattagagagggattt 25397895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 28265535 - 28265582
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| | ||||| |||||||||||||||||||||||||| |||||    
T  28265535 acaaattccatggtcgcaaaatttagtgacggaattagagagggattt 28265582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 33816818 - 33816856
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattaga 308  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  33816818 acaaattccttggtcgcaaaatttagtgacggaattaga 33816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 8108920 - 8108961
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  8108920 acaaatttcatggtcgcaaaatttagtgacggaattagagag 8108961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 12328286 - 12328327
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| |||| || ||||||||||||||||||||||||||    
T  12328286 acaaatttcttgatcgcaaaatttagtgacggaattagagag 12328327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 17986808 - 17986768
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagaga 310  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  17986808 acaaattccttcgtcgcaaaatttagtgacggaattagaga 17986768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 12845082 - 12845002
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||| || |||||  ||||||||||| |||| |||||    
T  12845082 acaaattctttggtcgcaaaatttagtgacggaattagagagagatttcacgttttccctctctaaattttcctcactaat 12845002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 9893042 - 9892957
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  9893042 acaaattccttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaatttccctcactaatttttg 9892957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 25398081 - 25398001
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| |||||    
T  25398081 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaat 25398001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 495687 - 495766
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||    
T  495687 acaaattccttggtcgcaaaatttagtgacggaattagagagtgattttacgttttccctcactaaatttccctcactaa 495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 6598543 - 6598496
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  6598543 acaaattacttggtcgcaaaatttagtgacggaattagagagggattt 6598496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 11049811 - 11049858
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  11049811 acaaattccttggtcgcaaaatttagtgacggaattagagagagattt 11049858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 15364518 - 15364603
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||  ||||| || |||||  || |||||||| |||| ||||| ||||    
T  15364518 acaaattccttggtcgcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaatttccctcactaatttttg 15364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 26224507 - 26224422
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||| | |||||||||| ||||    
T  26224507 acaaatttcttggtcacaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcgctaatttttg 26224422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 28364990 - 28364905
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  28364990 acaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 28364905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 5360488 - 5360432
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||| || |||||    
T  5360488 acaaattttttggtcgcaaaatttagtgacggaattagagagagattttacgttttc 5360432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 12351646 - 12351726
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||| ||| ||||||||| ||||||||||||||||| |||| || |||||  ||||||||||| |||| |||||    
T  12351646 acaaattccttagtcgcaaaatttaatgacggaattagagagaaatttcacgttttccctctctaaatttccctcactaat 12351726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 13145081 - 13145025
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||||    
T  13145081 acaaattccttggtcgcaaaatttagtgacggaattaaagagagatttcacgttttc 13145025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 19175837 - 19175893
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  |||| ||||||||    
T  19175837 acaaatttcttggtcgcaaaatttagtgacggaattagagaggaattttacattttc 19175893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 21990234 - 21990314
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||| ||||| |||||||||||||||||||| ||||| || |||||  || |||||||| |||| |||||    
T  21990234 acaaatttcttggtcgcaaaaattagtgacggaattagagagggattttacgttttccctcactaaattttcctcactaat 21990314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 2992694 - 2992647
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  2992694 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 2992647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 14772740 - 14772693
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||    
T  14772740 acaaattccttggtcgtaaaatttagtgacggaattagagagagattt 14772693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 18033585 - 18033632
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  18033585 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 18033632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 24661069 - 24661116
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  24661069 acaaattccttggtcgcaaaatttaatgacggaattagagagagattt 24661116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 26939666 - 26939619
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  26939666 acaaatttcttggtcgcaaaatttagtgacggaattagagagggattt 26939619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 17919613 - 17919559
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| ||| ||||    
T  17919613 aaattccttggtcgcaaaatttagtgacggaattagagagggattttacagtttc 17919559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 2669388 - 2669347
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  2669388 acaaattccttggtcgcaaaatttagtgacggaattagagag 2669347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 6978356 - 6978315
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  6978356 acaaattccttggtcgcaaaatttagtgacggaattagagag 6978315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 12951787 - 12951702
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| ||||||||| |||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  12951787 acaaattccttggtcgcaaaatttaatgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 12951702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 22083917 - 22083832
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||| ||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  22083917 acaaattccttggtcgcaaaattttgtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 22083832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 27705501 - 27705416
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  27705501 acaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 27705416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 14886623 - 14886555
Alignment:
Q  287 aaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||||||||||||||||||||| |||||||  |||||  || |||||||| |||| ||||| ||||    
T  14886623 aaaatttagtgacggaattagagagggatttgatgttttccctcactaaattttcctcactaatttttg 14886555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 355
Target Start/End: Complemental strand, 21141017 - 21140933
Alignment:
Q  271 caaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  21141017 caaatttcatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 21140933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 5270454 - 5270391
Alignment:
Q  287 aaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    |||||||||||||||||||||||||  |||| ||||||||  |||||||| || |||| |||||    
T  5270454 aaaatttagtgacggaattagagaggaatttcacattttccctctctaaaattccctcactaat 5270391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 6605556 - 6605603
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||| ||| |||||| |||||||||||||||||||||||||    
T  6605556 acaaatttcttagtcgcaaaatatagtgacggaattagagagagattt 6605603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 11077728 - 11077681
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| |||||    
T  11077728 acaaattccttggtcgcaaaatttagtgacggtattagagagggattt 11077681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 14872198 - 14872151
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||  |||||||||||||||||||||||||| |||||    
T  14872198 acaaattccttggttccaaaatttagtgacggaattagagagggattt 14872151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 22579419 - 22579494
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  22579419 tggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 22579494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 23281855 - 23281809
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||| |||||||||||||||||||||||||| ||||| || |||||    
T  23281855 tggtcgcaaaatttagtgacggaattagagagggatttcacgttttc 23281809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 12200773 - 12200688
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| |||||||  |||||||||||| |||||||||||| ||||| | ||||||  || |||||| | |||| ||||| ||||    
T  12200773 acaaattccttggtcgtaaaatttagtgagggaattagagagggatttcatattttccctcactaaatatccctcactaatttttg 12200688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 20182208 - 20182139
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  20182208 caaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttgcctcactaatttttg 20182139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 21691556 - 21691641
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||  |||||| ||||||||||||||| |||||||||| ||||| || ||||   |||||||| || |||| ||||| ||||    
T  21691556 acaaattctttggtcgcaaaatttagtgacgaaattagagagggatttcacgtttttcctctctaaaattccctcactaatttttg 21691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 22153783 - 22153852
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||||||||||||||||||||| ||||| || |||||  || | |||||| |||| ||||| ||||    
T  22153783 caaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttgcctcactaatttttg 22153852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 33250768 - 33250809
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||    
T  33250768 acaaattccttggtcgcaaaatttagtgatggaattagagag 33250809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 5192249 - 5192305
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  ||||||  ||||||||||||||||||||||||| ||||| || |||||    
T  5192249 acaaattctttggtcgtaaaatttagtgacggaattagagagggattttacgttttc 5192305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 12499295 - 12499239
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| ||||||||||||||||| |||||||| ||||| || |||||    
T  12499295 acaaattttttggtcgcaaaatttagtgacggagttagagagggattttacgttttc 12499239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 12506624 - 12506568
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| ||||||||||||||||| |||||||| ||||| || |||||    
T  12506624 acaaattttttggtcgcaaaatttagtgacggagttagagagggattttacgttttc 12506568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 12509606 - 12509662
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| ||||||||||||||||| |||||||| ||||| || |||||    
T  12509606 acaaattttttggtcgcaaaatttagtgacggagttagagagggattttacgttttc 12509662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 16250878 - 16250918
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||||||||| ||||||||||||||||| || |||||    
T  16250878 caaaatttagtgacagaattagagagagatttcacgttttc 16250918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 18492448 - 18492392
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| | ||||| |||||||||||||||||||||||| | ||||| || |||||    
T  18492448 acaaattccatggtcgcaaaatttagtgacggaattagagtgggatttcacgttttc 18492392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 3821 - 3747
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctc 344  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| ||||    
T  3821 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctc 3747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 202853 - 202773
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  |||| || |||||  || |||||||| |||| |||||    
T  202853 acaaattccttggtcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaattttcctcactaat 202773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 276210 - 276279
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    |||||||||||||||||||||||||| ||||| || |||||| || | |||||| |||| ||||| ||||    
T  276210 caaaatttagtgacggaattagagagggatttcacgttttctctcacaaaatttccctcactaatttttg 276279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 121047 - 121113
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaa 336  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  ||||||||    
T  121047 acaaatttcttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaa 121113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 84734 - 84790
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| ||||| || |||||    
T  84734 acaaattccttggtcgcaaaatttagtgatggaattagagagggattttacgttttc 84790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 6039 - 6124
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| ||||| || |||||  || |||||||| |||| ||||| ||||    
T  6039 acaaattccttggtcgcaaaatttagtgatggaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 7582 - 7505
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaa 349  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||| |||| ||||    
T  7582 aaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatttccctcactaa 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 9289 - 9374
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| ||||||| |||||||||||||||||||||||||  ||||| || |||||  || |||||||| |||| ||||| ||||    
T  9289 acaaattccttggtcgcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaatttccctcactaatttttg 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 8168 - 8217
Alignment:
Q  268 taacaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  8168 taacaaattccttggtcgcaaaatttagtgacggaattagagagggattt 8217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 21900 - 21949
Alignment:
Q  268 taacaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  21900 taacaaattccttggtcgcaaaatttagtgacggaattagagagggattt 21949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 84382 - 84297
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||| ||||||||  || | |||||| |||| ||||| ||||    
T  84382 acaaatttcatggtcacaaaatttagtgacggaattagagagggatttcacattttccctcacaaaatttccctcactaatttttg 84297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 15052 - 15120
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  15052 aaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 15120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 182609 - 182553
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||| ||| ||||    
T  182609 acaaattccttggtcgcaaaatttagtgacggaattagagagggattttacaatttc 182553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 440042 - 439986
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    ||||||| |||| || |||||||||||||||||||||||||| ||||| ||||||||    
T  440042 acaaatttcttgatcgcaaaatttagtgacggaattagagagggattttacattttc 439986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 19682 - 19635
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  19682 acaaattccttggtcgcaaaatttagtgacggaattagagagggattt 19635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 74603 - 74686
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaatatttg 355  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| ||||| ||||    
T  74603 aaatttcttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaatttttg 74686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 58659 - 58581
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaatttacctcgctaat 350  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||| |  |||||  || |||||||| |||| |||||    
T  58659 aaatttcttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttccctcactaat 58581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 22290 - 22220
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||| ||| |||||||||||||||||||||||||| ||||| || |||||  || |||||||||    
T  22290 acaaattccttagtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattta 22220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 981 - 1026
Alignment:
Q  272 aaattacttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||    
T  981 aaattccttggtcgcaaaatttagtgacggaattagagagggattt 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 26562 - 26506
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||  |||||| |||||||||||||||||||||||||| ||||| || |||||    
T  26562 acaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttc 26506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 39779 - 39819
Alignment:
Q  286 caaaatttagtgacggaattagagagagatttgacattttc 326  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  39779 caaaatttagtgacggaattagagagagatttcacgttttc 39819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 10723 - 10793
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagagagatttgacattttctgtctctaaattta 340  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||  |||| || |||||  || |||||||||    
T  10723 acaaattccttagtcgcaaaatttagtgacggaattagagaggaattttacgttttccctcactaaattta 10793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 317
Target Start/End: Complemental strand, 173514 - 173476
Alignment:
Q  279 ttggtctcaaaatttagtgacggaattagagagagattt 317  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  173514 ttggtcgcaaaatttagtgacggaattagagagtgattt 173476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 311
Target Start/End: Complemental strand, 10971 - 10930
Alignment:
Q  270 acaaattacttggtctcaaaatttagtgacggaattagagag 311  Q
    ||||||| ||||||| |||||||||||||| |||||||||||    
T  10971 acaaattccttggtcacaaaatttagtgacagaattagagag 10930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 37857 - 37894
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagattt 317  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  37857 tggtcgcaaaatttagtgacggaattagagagggattt 37894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 12721 - 12685
Alignment:
Q  280 tggtctcaaaatttagtgacggaattagagagagatt 316  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  12721 tggtcgcaaaatttagtgacggaattagagagggatt 12685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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