View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21205_high_56 (Length: 250)
Name: NF21205_high_56
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21205_high_56 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 1495376 - 1495153
Alignment:
| Q |
13 |
taggttcatagttgcggtttgtaagtttaagttgtcaaactcgttataatctcttttcagacctataaactctgatactataagtaggtcaagtgacggt |
112 |
Q |
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| T |
1495376 |
taggttcatagttgcggtttgtaagtttaagttgtcaaactcgttataatctcttttcagacctataaactctgatactataagtaggtcaagtgatggt |
1495277 |
T |
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| Q |
113 |
ttgtaaagtgataagtattagtatttgtaaacttctttcaaacctttaagctctgataata-------tttatactagacataactcatatttacacaat |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
1495276 |
ttgtaaagtgataagtattagtatttgtaaacttctttcaaacctttaagctctgataatattaagtttttatactagacataactcatatttacacaat |
1495177 |
T |
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| Q |
206 |
cggcttgtaacgtgagtaatgtca |
229 |
Q |
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|||||||||||||||||||||||| |
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| T |
1495176 |
cggcttgtaacgtgagtaatgtca |
1495153 |
T |
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