View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21205_high_60 (Length: 248)
Name: NF21205_high_60
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21205_high_60 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 39092778 - 39093004
Alignment:
| Q |
18 |
tccttgagatacctactcagcccttatcatataaagtccatatttccatcaccgagacatatgacaggtctataggcccacccatcactgagacatatga |
117 |
Q |
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| T |
39092778 |
tccttgagatacctactcaggccttatcatataaagtccatatttccatcaccgagatatatgacaggtctgtaggccca----tcactgatacatatga |
39092873 |
T |
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| Q |
118 |
cccatgacctgagtagaccaagtcatgtaagctgtatgcacaaacgcgccatactcgaatagagggaacataatatgataagcattaggagtgagtgtag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39092874 |
cccatgacctgagtagaccaagtcatgtaagctgtatgcacaaacgcgccatactcgaatagagggaacataatatgataagcattaggagtgagtgtag |
39092973 |
T |
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| Q |
218 |
caactagcttccgagttaaatggccacaatc |
248 |
Q |
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|||||||||||||||||| |||||||||||| |
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| T |
39092974 |
caactagcttccgagttagatggccacaatc |
39093004 |
T |
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