View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21205_low_41 (Length: 289)

Name: NF21205_low_41
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21205_low_41
NF21205_low_41
[»] chr7 (56 HSPs)
chr7 (18-283)||(3585356-3585622)
chr7 (183-283)||(8052429-8052528)
chr7 (183-283)||(13280756-13280856)
chr7 (183-283)||(4450668-4450768)
chr7 (192-283)||(8977479-8977570)
chr7 (183-283)||(2565903-2566003)
chr7 (183-283)||(11804695-11804795)
chr7 (183-283)||(18986744-18986844)
chr7 (183-283)||(19001372-19001472)
chr7 (183-265)||(26249075-26249157)
chr7 (192-283)||(5236875-5236966)
chr7 (183-283)||(9078881-9078982)
chr7 (183-283)||(3173707-3173807)
chr7 (183-283)||(9767782-9767882)
chr7 (183-283)||(23173685-23173785)
chr7 (182-283)||(6046524-6046625)
chr7 (183-276)||(39270273-39270365)
chr7 (183-283)||(10611710-10611810)
chr7 (183-283)||(19154815-19154915)
chr7 (183-283)||(20754214-20754314)
chr7 (183-283)||(23897237-23897337)
chr7 (182-283)||(2927871-2927972)
chr7 (183-280)||(19201458-19201555)
chr7 (183-243)||(9722478-9722538)
chr7 (183-243)||(10332441-10332501)
chr7 (186-265)||(14195763-14195842)
chr7 (183-249)||(6039297-6039363)
chr7 (185-243)||(21707339-21707397)
chr7 (183-242)||(1254696-1254754)
chr7 (193-243)||(9288947-9288997)
chr7 (193-243)||(9298739-9298789)
chr7 (183-283)||(1589236-1589337)
chr7 (182-283)||(6018355-6018456)
chr7 (183-252)||(19201322-19201391)
chr7 (183-243)||(1810941-1811001)
chr7 (183-235)||(10414279-10414331)
chr7 (183-283)||(13287710-13287810)
chr7 (192-251)||(3736365-3736424)
chr7 (193-283)||(10418554-10418644)
chr7 (183-221)||(17189710-17189748)
chr7 (180-242)||(20176131-20176193)
chr7 (194-283)||(144973-145061)
chr7 (187-283)||(21502851-21502948)
chr7 (183-283)||(9978282-9978382)
chr7 (183-267)||(15170764-15170848)
chr7 (192-223)||(16055265-16055296)
chr7 (181-223)||(1767433-1767475)
chr7 (183-221)||(24751198-24751236)
chr7 (192-265)||(1586206-1586279)
chr7 (194-223)||(5485680-5485709)
chr7 (200-265)||(21234118-21234183)
chr7 (183-223)||(2506820-2506860)
chr7 (183-231)||(12865259-12865307)
chr7 (183-223)||(13252707-13252747)
chr7 (183-231)||(17887730-17887778)
chr7 (183-231)||(44192361-44192409)
[»] chr1 (51 HSPs)
chr1 (42-177)||(10020000-10020135)
chr1 (183-283)||(18527496-18527596)
chr1 (183-283)||(15542308-15542408)
chr1 (183-283)||(729133-729233)
chr1 (183-279)||(12210266-12210362)
chr1 (183-283)||(21663090-21663190)
chr1 (183-283)||(22624613-22624713)
chr1 (183-283)||(26611331-26611431)
chr1 (183-264)||(27973319-27973400)
chr1 (183-283)||(21450764-21450864)
chr1 (183-265)||(14782545-14782627)
chr1 (182-284)||(22507380-22507483)
chr1 (183-265)||(26647357-26647439)
chr1 (187-265)||(28009761-28009839)
chr1 (183-251)||(33192381-33192449)
chr1 (183-283)||(35133881-35133981)
chr1 (183-265)||(15158788-15158870)
chr1 (183-265)||(24901224-24901306)
chr1 (182-252)||(25959458-25959528)
chr1 (198-283)||(16180715-16180799)
chr1 (182-283)||(18832212-18832313)
chr1 (183-283)||(18734585-18734685)
chr1 (183-283)||(18827393-18827493)
chr1 (183-283)||(21333071-21333171)
chr1 (183-283)||(22426515-22426615)
chr1 (180-283)||(16817105-16817208)
chr1 (193-283)||(16363620-16363710)
chr1 (183-283)||(25402435-25402535)
chr1 (181-283)||(9403631-9403723)
chr1 (182-265)||(27116222-27116305)
chr1 (195-249)||(16114831-16114885)
chr1 (187-265)||(22626158-22626236)
chr1 (182-230)||(24464664-24464712)
chr1 (204-283)||(12011205-12011284)
chr1 (183-242)||(14235284-14235343)
chr1 (182-265)||(20107869-20107952)
chr1 (183-241)||(22621832-22621890)
chr1 (182-232)||(44797166-44797216)
chr1 (182-243)||(11845220-11845281)
chr1 (185-282)||(16785603-16785700)
chr1 (193-280)||(26581574-26581660)
chr1 (183-243)||(9782979-9783039)
chr1 (193-265)||(15571698-15571770)
chr1 (183-231)||(27912113-27912161)
chr1 (183-242)||(17365809-17365868)
chr1 (183-233)||(7221563-7221613)
chr1 (183-241)||(26652613-26652671)
chr1 (183-220)||(23034931-23034968)
chr1 (183-223)||(15526806-15526846)
chr1 (183-283)||(18098248-18098348)
chr1 (183-231)||(34104967-34105015)
[»] chr4 (36 HSPs)
chr4 (182-283)||(15166465-15166566)
chr4 (182-283)||(22171745-22171846)
chr4 (183-283)||(17335355-17335455)
chr4 (196-283)||(7583789-7583876)
chr4 (184-283)||(9536756-9536855)
chr4 (194-283)||(10106292-10106381)
chr4 (183-279)||(17711307-17711403)
chr4 (183-283)||(18750821-18750921)
chr4 (182-283)||(12616711-12616812)
chr4 (184-252)||(8968072-8968140)
chr4 (182-252)||(25025134-25025204)
chr4 (183-283)||(19556541-19556639)
chr4 (183-280)||(17218529-17218625)
chr4 (183-283)||(9849707-9849807)
chr4 (183-243)||(13588745-13588805)
chr4 (211-279)||(16928925-16928993)
chr4 (196-283)||(20828152-20828239)
chr4 (177-243)||(17434471-17434537)
chr4 (183-251)||(22350240-22350308)
chr4 (183-283)||(25096297-25096394)
chr4 (182-243)||(15047804-15047865)
chr4 (182-243)||(15106559-15106620)
chr4 (183-283)||(11252129-11252229)
chr4 (203-243)||(16669741-16669781)
chr4 (183-251)||(17277874-17277942)
chr4 (195-265)||(9054020-9054090)
chr4 (183-265)||(14573464-14573545)
chr4 (193-243)||(19883522-19883572)
chr4 (194-283)||(11512037-11512126)
chr4 (180-265)||(12836067-12836152)
chr4 (227-283)||(17108715-17108771)
chr4 (195-265)||(9263362-9263432)
chr4 (177-251)||(19094279-19094353)
chr4 (227-265)||(19603901-19603939)
chr4 (183-221)||(22346138-22346176)
chr4 (182-243)||(1832053-1832114)
[»] chr3 (43 HSPs)
chr3 (186-283)||(8145245-8145342)
chr3 (183-283)||(12517287-12517387)
chr3 (183-283)||(34276437-34276537)
chr3 (183-274)||(19912586-19912677)
chr3 (183-283)||(18457111-18457211)
chr3 (187-283)||(25850952-25851048)
chr3 (183-252)||(52935533-52935602)
chr3 (183-283)||(13938846-13938946)
chr3 (183-283)||(16242194-16242293)
chr3 (186-265)||(22247012-22247090)
chr3 (183-265)||(7805757-7805839)
chr3 (193-283)||(8765671-8765761)
chr3 (193-283)||(8770561-8770651)
chr3 (183-265)||(18535785-18535867)
chr3 (183-261)||(22470402-22470480)
chr3 (183-283)||(1096761-1096860)
chr3 (194-282)||(8115305-8115393)
chr3 (192-283)||(12771211-12771302)
chr3 (183-265)||(819846-819928)
chr3 (195-265)||(12372344-12372414)
chr3 (203-283)||(3114729-3114809)
chr3 (183-243)||(20886905-20886965)
chr3 (183-274)||(2166035-2166125)
chr3 (186-268)||(19170144-19170226)
chr3 (183-283)||(27412658-27412759)
chr3 (183-235)||(26092950-26093002)
chr3 (183-243)||(31283903-31283963)
chr3 (183-261)||(2508719-2508797)
chr3 (203-261)||(19387879-19387937)
chr3 (184-265)||(3429225-3429306)
chr3 (182-283)||(20021816-20021917)
chr3 (234-283)||(20431469-20431518)
chr3 (183-252)||(20891645-20891714)
chr3 (183-283)||(16228344-16228444)
chr3 (213-283)||(17135089-17135159)
chr3 (181-283)||(21740476-21740578)
chr3 (181-243)||(27852601-27852663)
chr3 (194-283)||(14977803-14977892)
chr3 (183-231)||(5270806-5270854)
chr3 (209-253)||(5521550-5521594)
chr3 (182-234)||(15669337-15669389)
chr3 (183-223)||(23054591-23054631)
chr3 (192-243)||(22450486-22450537)
[»] chr8 (53 HSPs)
chr8 (183-283)||(17510901-17511001)
chr8 (192-283)||(15176441-15176532)
chr8 (182-283)||(20400331-20400432)
chr8 (183-283)||(13313271-13313371)
chr8 (182-283)||(19704983-19705084)
chr8 (185-283)||(24583173-24583271)
chr8 (181-283)||(23867827-23867929)
chr8 (182-283)||(29380959-29381061)
chr8 (183-283)||(29765391-29765492)
chr8 (183-283)||(14271838-14271938)
chr8 (183-283)||(17100206-17100306)
chr8 (183-283)||(24380353-24380453)
chr8 (183-283)||(25481505-25481605)
chr8 (183-283)||(22501830-22501930)
chr8 (183-283)||(28621601-28621701)
chr8 (183-283)||(6886665-6886767)
chr8 (183-265)||(21316798-21316880)
chr8 (197-283)||(24090892-24090978)
chr8 (185-283)||(26829468-26829566)
chr8 (183-283)||(18446859-18446959)
chr8 (183-283)||(19265819-19265919)
chr8 (183-279)||(24389757-24389853)
chr8 (183-283)||(26139785-26139885)
chr8 (183-242)||(21695413-21695472)
chr8 (183-265)||(4007151-4007233)
chr8 (186-252)||(30117661-30117727)
chr8 (182-279)||(24520001-24520098)
chr8 (182-283)||(26888483-26888584)
chr8 (182-242)||(5151957-5152017)
chr8 (186-242)||(15557405-15557461)
chr8 (183-231)||(18836841-18836889)
chr8 (183-238)||(25227301-25227356)
chr8 (183-265)||(24908919-24909001)
chr8 (183-265)||(24911140-24911222)
chr8 (183-236)||(13833603-13833656)
chr8 (183-243)||(6286319-6286379)
chr8 (183-235)||(17650006-17650058)
chr8 (183-243)||(28858873-28858932)
chr8 (183-281)||(24381325-24381424)
chr8 (195-265)||(18007551-18007620)
chr8 (182-223)||(28275323-28275364)
chr8 (195-283)||(28903979-28904067)
chr8 (183-283)||(19791390-19791490)
chr8 (192-244)||(24381995-24382047)
chr8 (183-222)||(24750883-24750922)
chr8 (185-243)||(14077159-14077216)
chr8 (185-243)||(15058506-15058564)
chr8 (198-267)||(7985130-7985199)
chr8 (192-265)||(17835558-17835631)
chr8 (187-244)||(24105520-24105577)
chr8 (183-243)||(12342891-12342951)
chr8 (183-219)||(17998315-17998351)
chr8 (183-243)||(24518588-24518647)
[»] chr6 (49 HSPs)
chr6 (183-283)||(17384020-17384120)
chr6 (184-283)||(24469795-24469894)
chr6 (183-283)||(14641629-14641729)
chr6 (183-283)||(22404254-22404354)
chr6 (183-283)||(24480021-24480121)
chr6 (187-283)||(17822027-17822124)
chr6 (208-283)||(19577562-19577637)
chr6 (192-265)||(22564558-22564631)
chr6 (183-283)||(9519729-9519829)
chr6 (183-283)||(14076393-14076493)
chr6 (193-281)||(14723683-14723771)
chr6 (183-283)||(21760407-21760507)
chr6 (183-283)||(14078034-14078135)
chr6 (183-283)||(19593975-19594076)
chr6 (183-252)||(21687129-21687198)
chr6 (183-279)||(1636635-1636730)
chr6 (183-267)||(4340677-4340761)
chr6 (185-265)||(9841034-9841114)
chr6 (203-283)||(21152511-21152591)
chr6 (196-283)||(11136915-11137002)
chr6 (184-283)||(23644318-23644417)
chr6 (183-265)||(8038050-8038132)
chr6 (192-242)||(27961252-27961302)
chr6 (194-279)||(22845862-22845947)
chr6 (183-283)||(18171253-18171353)
chr6 (182-265)||(19246291-19246374)
chr6 (183-265)||(9848178-9848260)
chr6 (192-234)||(23087116-23087158)
chr6 (183-243)||(14727171-14727231)
chr6 (203-283)||(17847777-17847857)
chr6 (185-244)||(26820896-26820955)
chr6 (192-265)||(15600423-15600496)
chr6 (180-265)||(19721843-19721927)
chr6 (193-265)||(21932489-21932562)
chr6 (192-283)||(21845737-21845829)
chr6 (228-283)||(8066649-8066704)
chr6 (184-223)||(17379461-17379500)
chr6 (193-252)||(21036958-21037017)
chr6 (210-265)||(21060431-21060486)
chr6 (210-265)||(21079748-21079803)
chr6 (183-241)||(31878848-31878906)
chr6 (186-243)||(8246650-8246706)
chr6 (193-265)||(13216314-13216387)
chr6 (183-220)||(23005246-23005283)
chr6 (183-220)||(23783100-23783137)
chr6 (209-242)||(32760007-32760040)
chr6 (196-232)||(3358190-3358226)
chr6 (183-239)||(9338978-9339034)
chr6 (183-231)||(10505195-10505243)
[»] chr2 (34 HSPs)
chr2 (183-279)||(26313179-26313275)
chr2 (183-283)||(27907522-27907622)
chr2 (183-282)||(28918186-28918285)
chr2 (183-283)||(17891728-17891828)
chr2 (195-283)||(18758298-18758386)
chr2 (183-283)||(21905723-21905823)
chr2 (183-265)||(23010043-23010125)
chr2 (183-283)||(17350975-17351075)
chr2 (183-242)||(16157084-16157143)
chr2 (184-283)||(18120546-18120645)
chr2 (182-265)||(35680099-35680182)
chr2 (183-283)||(29144631-29144732)
chr2 (187-283)||(24086310-24086406)
chr2 (183-283)||(25196608-25196708)
chr2 (183-283)||(25532233-25532333)
chr2 (183-283)||(25886191-25886291)
chr2 (192-283)||(22569051-22569142)
chr2 (188-283)||(27540270-27540365)
chr2 (181-283)||(34574510-34574613)
chr2 (181-283)||(25537553-25537655)
chr2 (183-241)||(26651637-26651695)
chr2 (209-265)||(22627399-22627455)
chr2 (184-283)||(28930271-28930371)
chr2 (184-243)||(29717358-29717418)
chr2 (183-265)||(18553304-18553386)
chr2 (183-243)||(32137912-32137972)
chr2 (182-265)||(16257875-16257958)
chr2 (194-252)||(25882581-25882639)
chr2 (185-243)||(28766889-28766947)
chr2 (187-265)||(29851031-29851109)
chr2 (183-221)||(34179307-34179345)
chr2 (183-243)||(18970775-18970833)
chr2 (183-231)||(16042663-16042711)
chr2 (183-283)||(20379283-20379383)
[»] scaffold0016 (1 HSPs)
scaffold0016 (203-283)||(4821-4901)
[»] chr5 (42 HSPs)
chr5 (203-283)||(23387567-23387647)
chr5 (193-283)||(28666489-28666579)
chr5 (186-283)||(24162014-24162111)
chr5 (183-283)||(20860336-20860436)
chr5 (194-283)||(17469569-17469658)
chr5 (183-283)||(19003765-19003865)
chr5 (183-283)||(23338889-23338988)
chr5 (183-283)||(34132083-34132183)
chr5 (183-283)||(29987953-29988054)
chr5 (183-274)||(25400738-25400829)
chr5 (184-265)||(24320522-24320604)
chr5 (183-283)||(24658299-24658400)
chr5 (183-283)||(19006848-19006948)
chr5 (183-279)||(19053102-19053198)
chr5 (183-243)||(25572478-25572538)
chr5 (183-283)||(26069246-26069346)
chr5 (183-243)||(26117474-26117534)
chr5 (185-283)||(22797422-22797520)
chr5 (183-265)||(26122397-26122479)
chr5 (183-265)||(34488872-34488954)
chr5 (192-265)||(18832237-18832310)
chr5 (182-243)||(23266853-23266914)
chr5 (183-283)||(20548453-20548553)
chr5 (183-263)||(23214825-23214905)
chr5 (181-285)||(29799039-29799143)
chr5 (178-265)||(23110191-23110278)
chr5 (183-241)||(19761581-19761639)
chr5 (193-283)||(25920828-25920918)
chr5 (187-244)||(15691304-15691361)
chr5 (183-283)||(24142404-24142504)
chr5 (183-283)||(31600075-31600175)
chr5 (181-252)||(18939548-18939619)
chr5 (183-265)||(24188913-24188996)
chr5 (242-283)||(16521962-16522003)
chr5 (183-223)||(17831750-17831790)
chr5 (183-243)||(26148279-26148339)
chr5 (185-265)||(26348457-26348537)
chr5 (183-223)||(32415830-32415870)
chr5 (192-243)||(24263759-24263810)
chr5 (182-223)||(21352972-21353013)
chr5 (183-223)||(24513196-24513236)
chr5 (203-243)||(26253529-26253569)
[»] scaffold0258 (1 HSPs)
scaffold0258 (182-283)||(20251-20352)
[»] scaffold0043 (1 HSPs)
scaffold0043 (183-261)||(88436-88514)
[»] scaffold0386 (3 HSPs)
scaffold0386 (185-265)||(4874-4954)
scaffold0386 (183-265)||(13474-13556)
scaffold0386 (183-251)||(9112-9179)
[»] scaffold0014 (1 HSPs)
scaffold0014 (183-283)||(192119-192219)
[»] scaffold0032 (1 HSPs)
scaffold0032 (183-265)||(92828-92910)
[»] scaffold0555 (1 HSPs)
scaffold0555 (183-283)||(6450-6550)
[»] scaffold0019 (3 HSPs)
scaffold0019 (181-283)||(182509-182611)
scaffold0019 (182-243)||(24839-24900)
scaffold0019 (182-243)||(35215-35276)
[»] scaffold0056 (1 HSPs)
scaffold0056 (183-280)||(23036-23133)
[»] scaffold0024 (1 HSPs)
scaffold0024 (182-283)||(41336-41436)
[»] scaffold0113 (1 HSPs)
scaffold0113 (182-231)||(6685-6734)
[»] scaffold0111 (1 HSPs)
scaffold0111 (182-283)||(21437-21538)
[»] scaffold0002 (2 HSPs)
scaffold0002 (214-283)||(95621-95690)
scaffold0002 (194-231)||(369261-369298)
[»] scaffold0637 (1 HSPs)
scaffold0637 (183-243)||(7423-7483)
[»] scaffold0451 (2 HSPs)
scaffold0451 (183-283)||(5727-5827)
scaffold0451 (193-265)||(10103-10175)
[»] scaffold0115 (1 HSPs)
scaffold0115 (195-251)||(36143-36199)
[»] scaffold0005 (1 HSPs)
scaffold0005 (183-265)||(243831-243912)
[»] scaffold0094 (1 HSPs)
scaffold0094 (182-243)||(12267-12328)
[»] scaffold0072 (1 HSPs)
scaffold0072 (183-242)||(38329-38388)
[»] scaffold0227 (1 HSPs)
scaffold0227 (186-231)||(1454-1499)


Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 3585356 - 3585622
Alignment:
Q  18 gttgcatattgaagaccagtgtcg-attttcttgtacttagattgtcgatataacatgttttgagctttcaacattaccttgtctctcatttgatcttca 116  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585356 gttgcatattgaagaccagtgtcacattttcttgtacttagattgtcgatataacatgttttgagctttcaacattaccttgtctctcatttgatcttca 3585455  T
Q  117 catcctcaggctcattcatgattttcaattctaagcgctccactgataaagcatcacgaagacttctgatgacaagtcatcttacattattcttagcatg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585456 catcctcaggctcattcatgattttcaattctaagcgctccactgataaagcatcacgaagacttctgatgacaagtcatcttacattattcttagcatg 3585555  T
Q  217 tttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585556 tttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 3585622  T

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Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 8052429 - 8052528
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  8052429 tgatgacaaatcatcttacgttattcttagcatgtttt-cagtcattttcagtaggttttagcagcaaaaatgaggagtattagaatgattgcctatgat 8052527  T

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Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 13280856 - 13280756
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| | | |||||||| ||||||||||||||||    
T  13280856 tgatgacatgtcatcttacgttattcttagcatgtttttcaattaatttcagtaggttttagcagcaaaaagaacgagtattagaatgattgcctatgat 13280757  T
Q  283 t 283  Q
    |    
T  13280756 t 13280756  T

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Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 4450768 - 4450668
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| || |||||||| ||||    
T  4450768 tgatgacagatcatcttacgttattcttagcatgttttccagtcattttcagtaggttttagcaacaaaatggaggagtattagaacgattgcctgtgat 4450669  T
Q  283 t 283  Q
    |    
T  4450668 t 4450668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 8977479 - 8977570
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||  | |||||||||||    
T  8977479 gtcatcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaactgcctatgatt 8977570  T

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Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 2566003 - 2565903
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||  |||| |||||||||||| || ||||| |||||||    
T  2566003 tgatgacaagtcatcttacgatattcttagcatgtttttcagtcattttcagtaggttttggcaagaaaaaggaggagtattataacgattgtctatgat 2565904  T
Q  283 t 283  Q
    |    
T  2565903 t 2565903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 11804795 - 11804695
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||| |||||| || ||||||||||| |||||||||||||||||||||||||||| |||| ||||||| || |||||||||||||    
T  11804795 tgatgacagatcatcttacgttattcataacatgtttttcagtcattttcagtaggttttagcagcaaaaaggagcagtattagaacgattgcctatgat 11804696  T
Q  283 t 283  Q
    |    
T  11804695 t 11804695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 18986744 - 18986844
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||| || || ||||||||||    
T  18986744 tgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgcctatgat 18986843  T
Q  283 t 283  Q
    |    
T  18986844 t 18986844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 19001372 - 19001472
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||| || || ||||||||||    
T  19001372 tgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgcctatgat 19001471  T
Q  283 t 283  Q
    |    
T  19001472 t 19001472  T

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Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 26249075 - 26249157
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  26249075 tgatgacaggtcatcttacgttattcatagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggatgagtatta 26249157  T

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Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 5236875 - 5236966
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| |||| ||  ||| |||||||||    
T  5236875 gtcatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggaggattagaacaatttcctatgatt 5236966  T

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Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 9078881 - 9078982
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgttttt-caatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||| |||||||||| ||||||||||||||||||| || | ||||||||||||||| |||||||||| |||||||||||  || ||||| ||||||    
T  9078881 tgatgacatgtcatcttacgttattcttagcatgttttttcagttattttcagtaggtttcagcagcaaaaaggaggagtattggaacgattgtctatga 9078980  T
Q  282 tt 283  Q
    ||    
T  9078981 tt 9078982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 3173807 - 3173707
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||| | ||||||||||||||||||||| ||||||||| ||||||| ||||| |||  |||||||||||| || |||||||||||||    
T  3173807 tgatgacagatcatcttgcgttattcttagcatgtttttcagtcattttcattaggtttcagcagtaaatgggaggagtattagaaagattgcctatgat 3173708  T
Q  283 t 283  Q
    |    
T  3173707 t 3173707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 9767882 - 9767782
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||||| || |||||||||||||||||||||  |||||||||||||||||| ||| ||||| ||||||||||| |   ||||||||||||    
T  9767882 tgatgacaggtcatctcacgttattcttagcatgtttttcagccattttcagtaggttttaccagaaaaatagaggagtattagatcaattgcctatgat 9767783  T
Q  283 t 283  Q
    |    
T  9767782 t 9767782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 23173685 - 23173785
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||||||||||||||| | ||||| | ||||||||||| |||||| |||||||||||| ||  |||| |||||||    
T  23173685 tgatgacatgtcatcttacgttattcttagcatgtttttcagttatttttaataggttttagctgcaaaaaggaggagtattagaacaattgtctatgat 23173784  T
Q  283 t 283  Q
    |    
T  23173785 t 23173785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 6046625 - 6046524
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||| |||||||||||  ||||||||| ||||||||| | |||||||||||| ||| ||||||| ||| |||||||||||  ||| |||||||||||    
T  6046625 ctgatgataagtcatcttatgttattcttaacatgttttttagtcattttcagtaagttgtagcagctaaaaggaggagtatttgaattattgcctatga 6046526  T
Q  282 tt 283  Q
    ||    
T  6046525 tt 6046524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 39270273 - 39270365
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcc 276  Q
    |||||||| |||||||||| |||| |||||||||||||||| ||||||| |||| |||||||||| |||| |||||||||||| || |||||||    
T  39270273 tgatgacatgtcatcttacgttat-cttagcatgtttttcagtcatttttagtaagttttagcagtaaaaaggaggagtattagaacgattgcc 39270365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 10611810 - 10611710
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||| | ||||||||||||||||| ||| | ||||| | |||||||||||||||||| ||| |||||||| || |||||||||||||    
T  10611810 tgatgacatatcatcttgcgttattcttagcatgtttctcagtgattttaaataggttttagcagcaaaaaggatgagtattagaacgattgcctatgat 10611711  T
Q  283 t 283  Q
    |    
T  10611710 t 10611710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 19154915 - 19154815
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||||||||||||||    |||||||||||||| | ||||||||| ||||| ||||| | | ||||||||||||    
T  19154915 tgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctatgat 19154816  T
Q  283 t 283  Q
    |    
T  19154815 t 19154815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 20754314 - 20754214
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||||||||||||||    |||||||||||||| | ||||||||| ||||| ||||| | | ||||||||||||    
T  20754314 tgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctatgat 20754215  T
Q  283 t 283  Q
    |    
T  20754214 t 20754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 23897337 - 23897237
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||| ||| |||| |||||| ||||||||  ||||||||||| |   ||||||||||||    
T  23897337 tgatgacatgtcatcttacattattcttaacatgtttttcagtcaattttagtatgttttaccagcaaaacagaggagtattatatcaattgcctatgat 23897238  T
Q  283 t 283  Q
    |    
T  23897237 t 23897237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 2927972 - 2927871
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |   ||| |||||| ||||| |||||||  ||||||||||| || |||| |||||||    
T  2927972 ctgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttagtagcaaaaatgaggagtattagaaagattacctatga 2927873  T
Q  282 tt 283  Q
    ||    
T  2927872 tt 2927871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 19201555 - 19201458
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    |||||||| |||||||||  ||||||||| ||||||||||  | |||||||||||| ||||||||||||| || ||| ||||| || |||||||||||    
T  19201555 tgatgacaggtcatcttatgttattcttaacatgtttttctgttattttcagtaggatttagcagcaaaaaggtggactattagaacgattgcctatg 19201458  T

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Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 9722538 - 9722478
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  9722538 tgatgacaaatcatcttacgttattattagcatgtttttcaatcattttcagtagatttta 9722478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 10332501 - 10332441
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  10332501 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgtttta 10332441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 14195842 - 14195763
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||| || ||||||  ||||||||||||||||||||| ||||||| ||||||||||| ||||||||  |||||||||||    
T  14195842 tgacaggtgatcttatgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtatta 14195763  T

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Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 6039297 - 6039363
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagca 249  Q
    ||||| || |||||||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||    
T  6039297 tgatgtcatgtcatcttacattattcttaacatgtttttcagtcattttcagtagattttaccagca 6039363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 21707339 - 21707397
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  21707339 atgacacgtcatcttacgttattcttagcatatttttcaatcatttttagtaggtttta 21707397  T

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Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 1254696 - 1254754
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||    
T  1254696 tgatgacaagtcatcttacgttatt-ttagcatgtttttcagtcattttcagttggtttt 1254754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 9288997 - 9288947
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  9288997 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggtttta 9288947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 9298789 - 9298739
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  9298789 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggtttta 9298739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 1589337 - 1589236
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatca-ttttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||| |||||||||   ||||||||||||||||||||  || |||||||||||||||| | ||||| | ||||||||||| | | ||||| |||||    
T  1589337 tgatgacaggtcatcttatgctattcttagcatgtttttcagccatttttcagtaggttttatctgcaaagtagaggagtattagattaattgcatatga 1589238  T
Q  282 tt 283  Q
    ||    
T  1589237 tt 1589236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 6018456 - 6018355
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||| | |||||||||  ||||| ||||||||||||||| ||  ||| ||||||||||| || |||||  ||||||||||| | | |||||||||||    
T  6018456 ctgatgatatgtcatcttatgttatttttagcatgtttttcagtcgattttagtaggttttaccaacaaaacagaggagtattagattaattgcctatga 6018357  T
Q  282 tt 283  Q
    ||    
T  6018356 tt 6018355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 19201322 - 19201391
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    ||||||||  ||||||||| ||||||||||||||||||||| | ||||| | |||| |||||||||||||    
T  19201322 tgatgacagatcatcttacgttattcttagcatgtttttcagtaatttttattaggctttagcagcaaaa 19201391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 1811001 - 1810941
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| |||||| |||||||||||||| ||||||| |||| ||||||    
T  1811001 tgatgacatgtcatcttacgttattcgtagcatgtttttcagtcattttaagtaagtttta 1810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 10414279 - 10414331
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagt 235  Q
    |||||||| |||||||||||||||||||||||||||||||  | |||||||||    
T  10414279 tgatgacaggtcatcttacattattcttagcatgtttttcggttattttcagt 10414331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 13287710 - 13287810
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |   ||| ||||||   || || ||||| ||| |||||||| || |||||||||||||    
T  13287710 tgatgacaagtcatcttacgttattcttaacatgtttttcagtttattttagtaggaaataacatcaaaaaggatgagtattagaacgattgcctatgat 13287809  T
Q  283 t 283  Q
    |    
T  13287810 t 13287810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 3736424 - 3736365
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaa 251  Q
    |||||||||| ||||||||||||||||||| | ||  ||||||||||||||| |||||||    
T  3736424 gtcatcttacgttattcttagcatgttttttagtctatttcagtaggttttaccagcaaa 3736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 10418644 - 10418554
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||| | ||| ||||| ||||||||| | |||||||||||||||||||  |||||||  ||||||||||| |   |||||||||||||    
T  10418644 tcatcttccgttactcttaacatgttttttagtcattttcagtaggttttactagcaaaacagaggagtattagagcaattgcctatgatt 10418554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 17189710 - 17189748
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgttttt 221  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  17189710 tgatgacatgtcatcttacattattcttagcatgttttt 17189748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 20176193 - 20176131
Alignment:
Q  180 ttctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    ||||||||||| || |  ||||||||||||||||||||||| || |||||||||||| |||||    
T  20176193 ttctgatgacatgtaactttacattattcttagcatgttttccagtcattttcagtatgtttt 20176131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 145061 - 144973
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||  ||||||||| |||||||| || ||||||| ||||||||||| |||||||| ||| |||||||| |   |||||||||||||    
T  145061 catcttatgttattcttaacatgtttt-cagtcatttttagtaggttttaccagcaaaacggatgagtattagagcaattgcctatgatt 144973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 21502948 - 21502851
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgttttt-caatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||| ||||||||||||||||| | |||||||||| |  ||||||| |||||||||||  ||| |||  ||||||||||| ||  |||||||||||||    
T  21502948 gacatgtcatcttacattattcgtggcatgttttttcggtcatttttagtaggttttacgagctaaacagaggagtattagaacaattgcctatgatt 21502851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 9978382 - 9978282
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||  |||||||||| || ||||||| |   ||| ||||||   |||||||||||||||||||||||| || | |||||||||||    
T  9978382 tgatgacagatcatcttatgttattcttagaatatttttcagtttattttagtaggaaatagcagcaaaatggaggagtattagaacggttgcctatgat 9978283  T
Q  283 t 283  Q
    |    
T  9978282 t 9978282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 15170764 - 15170848
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaa 267  Q
    |||||||| |||| |||||||||||||||  || |||| || ||||||||| ||| ||| | ||| |||| ||||||||||||||    
T  15170764 tgatgacaggtcaccttacattattcttacaatattttccagtcattttcaatagatttcaccagtaaaacggaggagtattaaa 15170848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 223
Target Start/End: Original strand, 16055265 - 16055296
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttca 223  Q
    ||||||||||||||||||||||||||||||||    
T  16055265 gtcatcttacattattcttagcatgtttttca 16055296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 1767475 - 1767433
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||||||||| |||||||||| ||||||||||||| |||||||    
T  1767475 tctgatgacaggtcatcttacgttattcttagcatatttttca 1767433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 24751198 - 24751236
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgttttt 221  Q
    |||||| || |||||||||||||||||||||||||||||    
T  24751198 tgatgaaaaatcatcttacattattcttagcatgttttt 24751236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 1586279 - 1586206
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||| ||| |||||||||||||||||| || || ||  ||||||||| || ||||||||| |||||| ||||    
T  1586279 gtcatcctacgttattcttagcatgttttccagtctttaccagtaggttataccagcaaaatagaggagcatta 1586206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 5485709 - 5485680
Alignment:
Q  194 catcttacattattcttagcatgtttttca 223  Q
    ||||||||||||||||||||||||||||||    
T  5485709 catcttacattattcttagcatgtttttca 5485680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 21234183 - 21234118
Alignment:
Q  200 acattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||| |||| ||||||| | ||||||||| ||||| ||  |||||||||||    
T  21234183 acattatttttagcatgttattcagtcatttttaataggttttaccagcataacagaggagtatta 21234118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 2506820 - 2506860
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||||||| |||||||||| ||||||| |||||||||||||    
T  2506820 tgatgacaggtcatcttacgttattctcagcatgtttttca 2506860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 12865307 - 12865259
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    ||||||||| ||||||||| ||||| | ||||| |||||||||||||||    
T  12865307 tgatgacaaatcatcttacgttattttcagcatatttttcaatcatttt 12865259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 13252707 - 13252747
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  13252707 tgatggcaggtcatcttacgttattcttagcatgtttttca 13252747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 17887730 - 17887778
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    |||||||| |||||| ||| ||||||||||||| ||||||| |||||||    
T  17887730 tgatgacaggtcatcctacgttattcttagcatatttttcagtcatttt 17887778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 44192361 - 44192409
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    ||||||||  ||||||||| ||||| | |||||||||||||||||||||    
T  44192361 tgatgacacatcatcttacgttattttcagcatgtttttcaatcatttt 44192409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 10020135 - 10020000
Alignment:
Q  42 attttcttgtacttagattgtcgatataacatgttttgagctttcaacattaccttgtctctcatttgatcttcacatcctcaggctcattcatgatttt 141  Q
    ||||||||| ||||||| || | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||    
T  10020135 attttcttggacttagaatgccaatataacatgttttgagatttcagcattaccttgtctctcatttgatcttcacatccttagcctcaatcatgatttt 10020036  T
Q  142 caattctaagcgctccactgataaagcatcacgaag 177  Q
    |||||||||| |||||||||||||||||||||||||    
T  10020035 caattctaagagctccactgataaagcatcacgaag 10020000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 18527496 - 18527596
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  18527496 tgatgacaagtcatcttacgttattcttagcatctttttcactcattttcaataggttttagcggcaaaaaggaggagtattagaatgattgcctatgat 18527595  T
Q  283 t 283  Q
    |    
T  18527596 t 18527596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 15542308 - 15542408
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| | |||||||||| || |||||||||||||    
T  15542308 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttagcagcaaaaagtaggagtattagaacgattgcctatgat 15542407  T
Q  283 t 283  Q
    |    
T  15542408 t 15542408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 729233 - 729133
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| || ||||| |||||||    
T  729233 tgatgaaaggtcatcttacgttattcttagcatgcttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgtctatgat 729134  T
Q  283 t 283  Q
    |    
T  729133 t 729133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 12210362 - 12210266
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||| | |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| || ||||| ||||    
T  12210362 tgatgataggtcatcttacattattcttagcatgtttttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaaagattgtctat 12210266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 21663090 - 21663190
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||| |||| ||||||| || |||||||||||||    
T  21663090 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacatcaaaaaggagaagtattagaacgattgcctatgat 21663189  T
Q  283 t 283  Q
    |    
T  21663190 t 21663190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 22624713 - 22624613
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||||||||||||||||||||||| | |   ||| |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  22624713 tgatgacatgtcatcttacattattcttagcatgtttttaagtttattttagtaggatttagcagcaaaaaggaggagtattaaaatgattgcctatgat 22624614  T
Q  283 t 283  Q
    |    
T  22624613 t 22624613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 26611331 - 26611431
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||||||||||||||||| | | | |||||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  26611331 tgatgacaggtcatcttacgttattcttagcatgtttttcaattaatattagtaggatttagcagcaaaaaggaggagtattggaatgattgcctatgat 26611430  T
Q  283 t 283  Q
    |    
T  26611431 t 26611431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 27973400 - 27973319
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatt 264  Q
    ||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  27973400 tgatgaccagttatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacagcaaaaaggaggagtatt 27973319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 21450864 - 21450764
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||  ||||  ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||  || |||||||||||||    
T  21450864 tgatgacaggtcatcttaagttatctttagcatgtttctcagtcattttcagtaggttttagcagcaaaaaggaggagtattggaaagattgcctatgat 21450765  T
Q  283 t 283  Q
    |    
T  21450764 t 21450764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 14782627 - 14782545
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||| |||||    
T  14782627 tgatgacaggtcatcttacgttattcttagcatgtttttcactcaatttcaataggttttagcagcaaaaaggaggactatta 14782545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 22507380 - 22507483
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaa-tcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    ||||||||| || ||||||| |||||||||||||||||||  | | ||||||| ||||||||||| |||||| |||||||||||| || |||||||||||    
T  22507380 ctgatgacatgtgatcttacgttattcttagcatgtttttttagttattttcattaggttttagcggcaaaaaggaggagtattagaacgattgcctatg 22507479  T
Q  281 attc 284  Q
    ||||    
T  22507480 attc 22507483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 26647357 - 26647439
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||| ||||||||||||| ||||||| || |||||||||||||||| || ||||| ||||||||||||    
T  26647357 tgatgacaggtcatcttacgttattcttagcatatttttcagtctttttcagtaggttttaccaacaaaacggaggagtatta 26647439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 28009839 - 28009761
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||  || ||||||||||||||| ||||||| ||||    
T  28009839 gacatgtcatcttacattattcttagcatgtttttcagtcattttcgctaagttttagcagcaaaaaggaggagcatta 28009761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 33192449 - 33192381
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaa 251  Q
    |||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  33192449 tgatgacaagtcatcttacgctattcttagcatgtttttcagtcaatttcagtaggttttaccagcaaa 33192381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 35133981 - 35133881
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||   |||||||||||||| || |||| ||||||||||| || |||||||||||||||||||| | |||||||| |||    
T  35133981 tgatgacaggtcatcttacgttatctgtagcatgtttttcagtcttttttagtaggttttaccaacaaaatggaggagtattaaagtaattgcctacgat 35133882  T
Q  283 t 283  Q
    |    
T  35133881 t 35133881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 15158788 - 15158870
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| ||||  |||| ||||||||||||||||||||| | ||||| |||||| ||||||||||||| ||||||||||||    
T  15158788 tgatgacaggtcaaattacgttattcttagcatgtttttcagttattttaagtaggatttagcagcaaaaaggaggagtatta 15158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 24901306 - 24901224
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||| ||||||||  ||| |||||||    
T  24901306 tgattacaagtcatcttacgttatttttagcatatttttcaatcattttcagtagattttaccagcaaaacagagaagtatta 24901224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 25959458 - 25959528
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    ||||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||| | ||||||    
T  25959458 ctgatgacaagtcatcttacattattcttaggatgtttctcagtctttttcagtaggttttaccggcaaaa 25959528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 16180799 - 16180715
Alignment:
Q  198 ttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||||||||||||||||||| | |||||||||||  ||||||| ||||| |||||||||||| ||  |||||||||||||    
T  16180799 ttacattattcttagcatgtttttcagttattttcagtagagtttagcaacaaaaaggaggagtattagaa-cattgcctatgatt 16180715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 18832313 - 18832212
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||  || |||||||||||||||||| | | ||| | ||||| |||||||||||| |||||||||||| || |||| |||||||    
T  18832313 ctgatgacaggtcatcttaggttcttcttagcatgtttttcagttactttaattaggtcttagcagcaaaaaggaggagtattagaacgattacctatga 18832214  T
Q  282 tt 283  Q
    ||    
T  18832213 tt 18832212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 18734585 - 18734685
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| || ||||||| ||||||||||||||||||||| |    || |||||| |||| |||||||| |||||||||||| || |||||||||||||    
T  18734585 tgatgacaggttatcttacgttattcttagcatgtttttcagtttactttagtaggatttaacagcaaaaaggaggagtattagaacgattgcctatgat 18734684  T
Q  283 t 283  Q
    |    
T  18734685 t 18734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 18827493 - 18827393
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||  |||||||||| ||||||||| ||||||||||| | ||||| | ||||| ||||||| | || ||| |||||||| ||||||||||||||||    
T  18827493 tgatgactggtcatcttacgttattcttaacatgtttttcagttattttaattaggtcttagcaggagaaaggatgagtattagaatgattgcctatgat 18827394  T
Q  283 t 283  Q
    |    
T  18827393 t 18827393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 21333071 - 21333171
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||  |||||||||  ||||||| || | | ||||| ||||||||||||| |||| |||| |||||||||| |||||||||||||    
T  21333071 tgatgacatgtcatcttatgttattcttaatatgttttgcacttagtttcaataggttttagcaggaaaaaggagaagtattaaaacgattgcctatgat 21333170  T
Q  283 t 283  Q
    |    
T  21333171 t 21333171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 22426515 - 22426615
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| | ||||||||||||||||||| |   ||| ||||||   ||||||||||| |||||||||||| || |||||||||||||    
T  22426515 tgatgacaggtcatcttacgtcattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatgat 22426614  T
Q  283 t 283  Q
    |    
T  22426615 t 22426615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 16817105 - 16817208
Alignment:
Q  180 ttctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| |   ||| ||||||   ||||||||||| |||||||| ||| ||  |||||||||    
T  16817105 ttctgatgacaagtcatcttacgttattcttaacatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtgttagaactattgcctat 16817204  T
Q  280 gatt 283  Q
    ||||    
T  16817205 gatt 16817208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 16363710 - 16363620
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||| ||||| |||||||||||| || ||||||||||||| ||||| || |||||| ||||||||||| |   |||||||||||||    
T  16363710 tcatcttacgttatttttagcatgttttccagtcattttcagtagtttttaccaacaaaatagaggagtattagatcaattgcctatgatt 16363620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 25402435 - 25402535
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||| | ||||||||||||||||||||| |   ||| |||||| |||||||||||||  ||||||||||| || |||||  ||||||    
T  25402435 tgatgacaggtcatcttgcgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaagaggagtattagaacgattgtttatgat 25402534  T
Q  283 t 283  Q
    |    
T  25402535 t 25402535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 9403723 - 9403631
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    ||||||||||  |||||||||||||||||||||||||||||||          ||||||||||||||||||| | |||||||||| || | |||||||||    
T  9403723 tctgatgacagatcatcttacattattcttagcatgtttttca----------gtaggttttagcagcaaaaagaaggagtattagaacgtttgcctatg 9403634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 27116222 - 27116305
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| | |||||||||| || |||||| ||||||||||||||||||| ||||||||||| ||  |||| ||| ||||||||    
T  27116222 ctgatgaaatgtcatcttacgtttttcttaacatgtttttcaatcatttttagtaggttttaccataaaaacggatgagtatta 27116305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 16114885 - 16114831
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagca 249  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||| |||||    
T  16114885 atcttacgttattcttagcatgtttttcaatcattttcagcatgttttaccagca 16114831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 22626158 - 22626236
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| |||||||||| ||||||||||||||||||| |||  |||| ||||| ||||| ||||||||  |||||||||||    
T  22626158 gacaggtcatcttacgttattcttagcatgtttttgaattttttttagtagcttttaccagcaaaacagaggagtatta 22626236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 24464712 - 24464664
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattt 230  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  24464712 ctgatgacatgtcatcttacgttattcttagcatgtttttcagtcattt 24464664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 12011205 - 12011284
Alignment:
Q  204 tattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||||| | | |||||||| |   |||||||||||||    
T  12011205 tatttttagcatgtttttcacacattttcagtaggttttaccagcaaaacgaatgagtattagagcaattgcctatgatt 12011284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 14235284 - 14235343
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    ||||| || |||||||||| ||| ||||||||||||||||| ||||||| ||||||||||    
T  14235284 tgatggcatgtcatcttacgttactcttagcatgtttttcagtcatttttagtaggtttt 14235343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 20107952 - 20107869
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||| ||||||||||||||| ||||||||||||||||||  |   ||| ||||||   ||||||||||| ||||||||||||    
T  20107952 ctgatggcaagtcatcttacatcattcttagcatgtttttctgtttattttagtaggaaatagcagcaaaaaggaggagtatta 20107869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 22621890 - 22621832
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttt 241  Q
    |||||||| || ||||||| | ||||||||||||||||||| ||||||| |||||||||    
T  22621890 tgatgacaggttatcttacgtaattcttagcatgtttttcagtcatttttagtaggttt 22621832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 44797216 - 44797166
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttc 232  Q
    |||||||||  ||||||||||||||||||||||||||||||| || |||||    
T  44797216 ctgatgacagatcatcttacattattcttagcatgtttttcagtctttttc 44797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 11845220 - 11845281
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||  ||||||||| ||||||||||||| ||||||| | ||||| |||||||||||    
T  11845220 ctgatgacagatcatcttacgttattcttagcatatttttcagttatttttagtaggtttta 11845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 16785603 - 16785700
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | ||||||||  |||| |||||||||| || ||| ||||||| | ||||||| ||| |||| |||||||||||| ||  ||||||||||||    
T  16785603 atgacatgacatcttacgctatttttagcatgttcttaaataattttcaatgggttttaccagtaaaacggaggagtattagaacaattgcctatgat 16785700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 26581660 - 26581574
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagca-gcaaaatggaggagtattaaaatgattgcctatg 280  Q
    ||||||||||||||||||||||||||||||| | ||||||| |  |||||  ||  || ||||||||||||||| ||| ||||||||||    
T  26581660 tcatcttacattattcttagcatgtttttcagttattttcaatcagtttt--catccataatggaggagtattagaattattgcctatg 26581574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 9782979 - 9783039
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||  ||||||||| ||||| ||||||||||||||||||  ||| |||||||||||    
T  9782979 tgatgacagatcatcttacgttattattagcatgtttttcaatctattttagtaggtttta 9783039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 15571698 - 15571770
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||| ||||| ||||||||||||||| ||| ||| |||||||||||  ||||||   |||||||||||    
T  15571698 tcatcttacgttatttttagcatgtttttcagtcaattttagtaggttttactagcaaagcagaggagtatta 15571770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 27912161 - 27912113
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    |||||||| |||||||||| ||||||||| ||||||||||| |||||||    
T  27912161 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcatttt 27912113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 17365868 - 17365809
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    |||||||||||||||| || |||||||| | || ||||| | ||||||||||||||||||    
T  17365868 tgatgacaagtcatctcacgttattcttggaatattttttagtcattttcagtaggtttt 17365809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 7221613 - 7221563
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttca 233  Q
    |||| ||| |||||||||| ||||||||| ||||||||||| |||||||||    
T  7221613 tgataacatgtcatcttacgttattcttaacatgtttttcagtcattttca 7221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 26652671 - 26652613
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttt 241  Q
    |||||||| |||||| ||| ||||| ||||||||||||||| | ||||| |||||||||    
T  26652671 tgatgacatgtcatcctacgttatttttagcatgtttttcagttatttttagtaggttt 26652613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 23034931 - 23034968
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttt 220  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  23034931 tgatgacaggtcatcttgcattattcttagcatgtttt 23034968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 15526806 - 15526846
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||||||| |||||||||| ||||||||| |||||||||||    
T  15526806 tgatgacatgtcatcttacgttattcttatcatgtttttca 15526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 18098248 - 18098348
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| || ||||||| ||||| ||||  ||||||||||||   || ||||||||||| |||||||   ||||||||||| |   ||||||||||||    
T  18098248 tgatgacaggttatcttacgttatttttagactgtttttcaatctaatttagtaggttttaccagcaaaccagaggagtattagatcaattgcctatgat 18098347  T
Q  283 t 283  Q
    |    
T  18098348 t 18098348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 34105015 - 34104967
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    ||||||||||||||||||| ||||| |||  || |||||||||||||||    
T  34105015 tgatgacaagtcatcttacgttatttttaatatatttttcaatcatttt 34104967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 15166566 - 15166465
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| || |||||||| |||    
T  15166566 ctgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggttttagcagcaaaaacgaggagtattagaacgattgcctgtga 15166467  T
Q  282 tt 283  Q
    ||    
T  15166466 tt 15166465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 22171846 - 22171745
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||||||||||||||||||||||||    ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||    
T  22171846 ctgatgacaggtcatcttacattattcttagcatgtttttctgctattttcattaggttttagcagcaaaaaggaggagtattagaatgattgcctatga 22171747  T
Q  282 tt 283  Q
    ||    
T  22171746 tt 22171745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 17335355 - 17335455
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||| |||||||||||| |||||||||||| ||||||| ||||||| |||||||||||| || |||||||||||||    
T  17335355 tgatgacatgtcatcttacgttattcttggcatgtttttcagtcattttcagtaagttttagaagcaaaaaggaggagtattagaacgattgcctatgat 17335454  T
Q  283 t 283  Q
    |    
T  17335455 t 17335455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 7583876 - 7583789
Alignment:
Q  196 tcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||||||||    
T  7583876 tcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatgatt 7583789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 9536756 - 9536855
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||| ||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||  ||| |||||||||    
T  9536756 gatgacaggtcctcttatgttattcttagcatgtttttcaattattttcagtaggttttagcagcaaaaaggaggagtattacaacaattacctatgatt 9536855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 10106381 - 10106292
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||| ||  |||| ||||||||    
T  10106381 catcttacattattcttagcatgtttttctgtcattttcagtaggttttagctgcaaaaaggaggagtattacaacaattgtctatgatt 10106292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 17711403 - 17711307
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||||| ||||  |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||  ||||||||||| || ||||||||||    
T  17711403 tgatgacaggtcaaattacattattcttagcatgttttttagtcattttcagtaggttttagctgcaaaaatgaggagtattagaacgattgcctat 17711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 18750921 - 18750821
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||||||||| ||||||| ||||||| | |||||||||||| ||||||||||||| |||||||||||| |   ||||||||||||    
T  18750921 tgatgacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatgat 18750822  T
Q  283 t 283  Q
    |    
T  18750821 t 18750821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 12616812 - 12616711
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||| | ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| |||||||| ||  ||| |||||||    
T  12616812 ctgatgacatgtcatcttacgtaattcttaacatgtttttcagtctttttcagtaggttttagcagcaaaaaggatgagtattagaacaatttcctatga 12616713  T
Q  282 tt 283  Q
    ||    
T  12616712 tt 12616711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 8968072 - 8968140
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  8968072 gatgacatgtcatcttacgttattcttagcatgtttttcagtcattttaagtaggttttagcagcaaaa 8968140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 25025204 - 25025134
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    ||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  25025204 ctgatgacaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaa 25025134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 19556541 - 19556639
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||||||| |||||| ||||||||| |||||||||||| ||| | || ||||||||| || |||||||||||||    
T  19556541 tgatgacaggtcatcttacgttattcttagcatg-ttttcagtcattttcaataggttttagcaccaataagg-ggagtattagaacgattgcctatgat 19556638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 17218625 - 17218529
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    |||||| | |||||||||| ||||||||||||||||||||| |||  ||||||| ||||| | ||||||| |||||||||||| || |||||||||||    
T  17218625 tgatgataggtcatcttacgttattcttagcatgtttttcagtca-attcagtaagttttcgaagcaaaaaggaggagtattagaacgattgcctatg 17218529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 9849707 - 9849807
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||| |||||||||| ||||||| ||||||||||| || |||||   |||||||||| |   ||||||||||||    
T  9849707 tgatgacaggtcatcttacgttattcttagtatgtttttcagtcatttttagtaggttttaccaacaaaacaaaggagtattagatcaattgcctatgat 9849806  T
Q  283 t 283  Q
    |    
T  9849807 t 9849807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 13588805 - 13588745
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  13588805 tgatgacaaatcatcttacgttattattagcatgtttttcaatcattttcagtagatttta 13588745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 16928993 - 16928925
Alignment:
Q  211 agcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    ||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||| |||||||| ||||    
T  16928993 agcatgtttttcagtcattttcagtaggttttagcggcaaaaatgaggagtattagaatgattgtctat 16928925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 20828152 - 20828239
Alignment:
Q  196 tcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||| ||||||||||||| ||||||| || |||||| ||||| |||||||||||||  |||||||||| ||  |||||||||||||    
T  20828152 tcttacgttattcttagcatctttttcagtctttttcaataggtattagcagcaaaataaaggagtattacaacaattgcctatgatt 20828239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 17434537 - 17434471
Alignment:
Q  177 gacttctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||| |||||||| |||||||||| ||||| ||||||||||||| | |||||||||||||||||||    
T  17434537 gacttgtgatgacaggtcatcttacgttatttttagcatgtttttaagtcattttcagtaggtttta 17434471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 22350240 - 22350308
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaa 251  Q
    ||||||||| ||||||||||||||||||||||||||||||| |   ||| ||||||||||| |||||||    
T  22350240 tgatgacaaatcatcttacattattcttagcatgtttttcagtttattttagtaggttttaccagcaaa 22350308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 25096394 - 25096297
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| || ||||||||||||||| || | ||||||||||||   | ||||||||||   ||||||||| || |||||||||||||    
T  25096394 tgatgacatgtcatcttacgttgttcttagcatgttttacagtaattttcagtaggaaattgcagcaaaat---ggagtattagaacgattgcctatgat 25096298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 15047865 - 15047804
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||| |||| |||| |||||||| |||||||||||| ||| |||||||||||||||    
T  15047865 ctgatgacaattcattttacgttattcttggcatgtttttcagtcaatttcagtaggtttta 15047804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 15106559 - 15106620
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||| |||| |||| |||||||| |||||||||||| ||| |||||||||||||||    
T  15106559 ctgatgacaattcattttacgttattcttggcatgtttttcagtcaatttcagtaggtttta 15106620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 11252129 - 11252229
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||| ||||||||||||||| |   ||| |||||| |||||||  ||||   |||||||||| || |||||||||||||    
T  11252129 tgatgacaggtcatcttacgttatttttagcatgtttttcagtttattttagtaggatttagcaaaaaaaaaaaggagtattagaacgattgcctatgat 11252228  T
Q  283 t 283  Q
    |    
T  11252229 t 11252229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 16669741 - 16669781
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  16669741 ttattcttagcatgtttttcaatcaatttcagtaggtttta 16669781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 17277942 - 17277874
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaa 251  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||  ||| |||| |||||| |||||||    
T  17277942 tgatgacatgtcatcttacgttattcttagcatgtttttcagtctattttagtaagttttaccagcaaa 17277874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 9054090 - 9054020
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| ||| |||||||||||||| || |||||||||||||||||||  |||| ||| || ||||||||    
T  9054090 atcttacgttaatcttagcatgttttgcagtcattttcagtaggttttacaagcagaatagatgagtatta 9054020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 14573545 - 14573464
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||  ||||||||| ||||||||||||| ||||| | ||||||| |||||||||||  |||||||  |||||||||||    
T  14573545 tgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtatta 14573464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 19883522 - 19883572
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||||    
T  19883522 tcatcttacgtaattcttagtatgtttttcgatcattttcagtaggtttta 19883572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 11512037 - 11512126
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||  ||||||||| ||||||||||| ||| || ||||||||||||  |||||||   |||||||||| ||| |||| ||||||||    
T  11512037 catcttatgttattcttatcatgtttttcagtcaattgcagtaggttttacaagcaaaacaaaggagtattagaataattgtctatgatt 11512126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 12836067 - 12836152
Alignment:
Q  180 ttctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| ||||||  ||||||||| ||||||||||||||||||||| ||||||| ||||  |||||  || |||||  ||||||||||    
T  12836067 ttctaatgacatttcatcttacgttattcttagcatgtttttcagtcatttttagtatattttacaaggaaaataaaggagtatta 12836152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 17108771 - 17108715
Alignment:
Q  227 attttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||||||||||| |||||||| ||| |||||||| ||  |||||||||||||    
T  17108771 attttcagtaggttttaacagcaaaaaggatgagtattagaaaaattgcctatgatt 17108715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 9263362 - 9263432
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| ||||| ||||||||||||||| |||  |||| ||||||||| ||||| ||  |||||||||||    
T  9263362 atcttacgttatttttagcatgtttttcagtcaaattcaataggttttatcagcagaactgaggagtatta 9263432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 19094353 - 19094279
Alignment:
Q  177 gacttctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaa 251  Q
    |||| |||||||||||||| ||||||||||| ||| ||| |||||   ||| ||| ||||||||||| |||||||    
T  19094353 gactcctgatgacaagtcaacttacattatttttaacatatttttatgtcaattttagtaggttttaccagcaaa 19094279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 19603901 - 19603939
Alignment:
Q  227 attttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  19603901 attttcagtaggttttagtagcaaaaaggaggagtatta 19603939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 22346176 - 22346138
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgttttt 221  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  22346176 tgatgacaagtcatcttacgttattcttagcatattttt 22346138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 1832053 - 1832114
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||| |||||||||  |||||||  |||||||||||| |||| || |||||||||||    
T  1832053 ctgatgacatgtcatcttatgttattctaggcatgtttttcagtcatattaagtaggtttta 1832114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 8145342 - 8145245
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||  |||||||||||||    
T  8145342 tgacaggtcatcttacattattcttagcatgtttttcaatcaatttcagtaggttttagcagcaaaaatgaggagtattaaaacaattgcctatgatt 8145245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 12517387 - 12517287
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  12517387 tgatgacaggtcatcttacgttattcttagcatctttttcagtcattttcagtaggttttagtagcaaaaaggaggagtattagaatgattgcctatgat 12517288  T
Q  283 t 283  Q
    |    
T  12517287 t 12517287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 34276437 - 34276537
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||| |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  34276437 tgatgacaggtcattttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattataacgattgcctatgat 34276536  T
Q  283 t 283  Q
    |    
T  34276537 t 34276537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 19912677 - 19912586
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattg 274  Q
    |||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||| || |||||    
T  19912677 tgatgacaggtcatcttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaagaggagtattagaacgattg 19912586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 18457111 - 18457211
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||||||||  ||||||||| ||||| |||| | |||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||    
T  18457111 tgatgacaggtcatcttacgctattcttaggatgttattcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatgat 18457210  T
Q  283 t 283  Q
    |    
T  18457211 t 18457211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 25850952 - 25851048
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||| |||||||||  ||||||||||||||||||||| | ||||| |||||| |||||||||| || ||||||||||||||| ||||||||||||||    
T  25850952 gacaggtcatcttatgttattcttagcatgtttttcagttatttttagtaggatttagcagcagaaaggaggagtattaaaacgattgcctatgatt 25851048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 52935533 - 52935602
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    |||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52935533 tgatgataggtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccagcaaaa 52935602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 13938846 - 13938946
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||| |||| |||||||||||||||| || || || |||||||||||||||||| ||||| |||||||||||| || ||||||| |||||    
T  13938846 tgatgacaggtcattttacgttattcttagcatgttgttaaagcaatttcagtaggttttagcaccaaaaaggaggagtattagaacgattgccaatgat 13938945  T
Q  283 t 283  Q
    |    
T  13938946 t 13938946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 16242194 - 16242293
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||||||| ||||||| ||||||| |||| |||||||||| |||| | |||||||||| || |||||||||||||    
T  16242194 tgatgacaggtcatcttacgttattcttagcatatttttcactcatttttagta-gttttagcagaaaaaagaaggagtattagaacgattgcctatgat 16242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 22247090 - 22247012
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  22247090 tgacatgtcatcttacgttattcttagcat-tttttcagtcattttcagtaggttttaccagcaaaatagaggagtatta 22247012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 7805839 - 7805757
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||    |||||| |||||||||||    
T  7805839 tgatgacaggtcatcttacgttattcttagcatgtttttcaatcattttcagtatgttttacatccaaaatagaggagtatta 7805757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 8765761 - 8765671
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||  ||||||||||| || |||| |||||||||    
T  8765761 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatgatt 8765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 8770651 - 8770561
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||  ||||||||||| || |||| |||||||||    
T  8770651 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatgatt 8770561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 18535867 - 18535785
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||| |||||||   |||||||||||    
T  18535867 tgatgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagcagaggagtatta 18535785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 22470402 - 22470480
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagt 261  Q
    |||||||| |||||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||  |||||||    
T  22470402 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttaccagcaaaacagaggagt 22470480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 1096761 - 1096860
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||| |||||||||| | |||||||||||  ||||||||||||||| |||||| || || || |||||||||||||    
T  1096761 tgatgacaggtcatcttacgttattctttgcatgttttt-agtcattttcagtcagttttagcagcaaaaaggaggattactagaacgattgcctatgat 1096859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 8115305 - 8115393
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||| |||||||||||| || | ||||| |||||||||||| ||||||| |||||||||||| || |||||||||||||    
T  8115305 catcttacgttatttttagcatgttttccagttattttgagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatgat 8115393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 12771211 - 12771302
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||  || |||||||| || |||| ||| |||||    
T  12771211 gtcatcttacgttattcttagcatgtttttcagtcattttcagtatattttagcagcaaaaatgatgagtattagaacgatttcctgtgatt 12771302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 819846 - 819928
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||| | |||||||||| ||||||||||||||||||||| ||| |||||||||||||||  |||| ||| |||||||||||    
T  819846 tgatgataggtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggttttacaagcataatagaggagtatta 819928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 12372344 - 12372414
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  12372344 atcttacgtaattcttagcatttttttcaatcattttcagtaggttttacgagcaaaaaggaggagtatta 12372414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 3114729 - 3114809
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||||||||  ||||||||||| | | |||||||||||||    
T  3114729 ttattcttagcatgtttttcagtcttttacagtaggttttaccagcaaaacagaggagtattagagtaattgcctatgatt 3114809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 20886965 - 20886905
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  20886965 tgatgacaggtcatcttacgttattcttagcatgtttttcaatcgttttcaataggtttta 20886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 2166035 - 2166125
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattg 274  Q
    |||||||| |||||  ||| |||||||| ||||||||||   |||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  2166035 tgatgacaggtcatgatacgttattcttggcatgttttttg-tcattttcagtaggttttagcaacaaaaaggaggagtattaaaacgattg 2166125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 19170144 - 19170226
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaa 268  Q
    ||||| |||||||| || |||||||||||||||||||  ||| ||||||| ||||||||||| ||||  ||||||||||||||    
T  19170144 tgacatgtcatcttgcactattcttagcatgtttttcggtcaatttcagttggttttagcagaaaaaacgaggagtattaaaa 19170226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 27412658 - 27412759
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaat-cattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |   ||||  |||||   |||||| ||||||||||||||||||||  |||||||||||    
T  27412658 tgatgacaagtcatcttacgttatttttagcatgtttttcagtattttttttgtaggaaatagcagaaaaatggaggagtattaaaacaattgcctatga 27412757  T
Q  282 tt 283  Q
    ||    
T  27412758 tt 27412759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 26093002 - 26092950
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagt 235  Q
    |||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  26093002 tgatgacatgtcatcttacattattcttagcatatttttcaattattttcagt 26092950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 31283903 - 31283963
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| ||||||| || ||||||||| ||||||||||||||||||| |||||||||||    
T  31283903 tgatgacaggtcatctaacgttattcttatcatgtttttcaatcattttaagtaggtttta 31283963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 2508719 - 2508797
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagt 261  Q
    ||||| || |||||||||| |||||||||| |||||||||| |||||||||||| |||||| |||| ||| ||| ||||    
T  2508719 tgatggcatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaagttttaacagcgaaaaggatgagt 2508797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 19387879 - 19387937
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagt 261  Q
    ||||| ||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  19387879 ttatttttagcttgtttttcagtcattttcagtaggttttaccagcaaaatagaggagt 19387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 3429225 - 3429306
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| |||||||||| ||||||||| ||||||||||| ||  ||| ||||||||||| |||||||   |||||||||||    
T  3429225 gatgacatgtcatcttacgttattcttatcatgtttttcattctattttagtaggttttaccagcaaaccagaggagtatta 3429306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 20021816 - 20021917
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||| ||| ||||||||||||||||| |   ||| |||| |   |||||||||||||||||||||||| || ||||| || |||    
T  20021816 ctgatgacatgtcatcttacgttactcttagcatgtttttcagtttattttagtatgaaatagcagcaaaatggaggagtattagaacgattgtctgtga 20021915  T
Q  282 tt 283  Q
    ||    
T  20021916 tt 20021917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 20431518 - 20431469
Alignment:
Q  234 gtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  20431518 gtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 20431469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 20891645 - 20891714
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    ||||| || |||||||||| ||||||||||||| ||||||| || |||||||||||||||| || |||||    
T  20891645 tgatggcaggtcatcttacgttattcttagcatatttttcagtcgttttcagtaggttttaccaacaaaa 20891714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 16228344 - 16228444
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||||||| |||||| |   ||| ||||||   ||||| ||||| |||||||||||| ||  ||||||||||||    
T  16228344 tgatgacaggtcatcttacgttattcttagcatgcttttcagtttattttagtaggaaatagcaacaaaaaggaggagtattagaactattgcctatgat 16228443  T
Q  283 t 283  Q
    |    
T  16228444 t 16228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 17135159 - 17135089
Alignment:
Q  213 catgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| | | |||| ||||||||    
T  17135159 catgtttttcagtcatttttagtaggttttactagcaaaatagaggagtattatattaattgtctatgatt 17135089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 21740578 - 21740476
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    ||||||||||| ||||||||| ||||| | || |||||||||||| ||||||| ||| |||||  |||||||  ||||||| ||  || ||||| |||||    
T  21740578 tctgatgacaattcatcttacgttattttaagtatgtttttcaattattttcattagattttaatagcaaaaatgaggagtttttgaacgattgactatg 21740479  T
Q  281 att 283  Q
    |||    
T  21740478 att 21740476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 27852601 - 27852663
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||| ||| |||||| ||||| ||||||||| ||| | |||||||||||||||||||    
T  27852601 tctgatgacatgtcgtcttacgttatttttagcatgtcttttagtcattttcagtaggtttta 27852663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 14977892 - 14977803
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||| ||||||||||||| ||||||| |   ||| |||| | ||||| ||||||| |||||||||||| ||  |||||||||||||    
T  14977892 catcttacgttattcttagcatatttttcagtttattttagtatgatttagtagcaaaaaggaggagtattataacaattgcctatgatt 14977803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 5270806 - 5270854
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    |||||||||  ||||||||||||||||||| |||||||||| |||||||    
T  5270806 tgatgacaaaccatcttacattattcttaggatgtttttcagtcatttt 5270854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 5521594 - 5521550
Alignment:
Q  209 ttagcatgtttttcaatcattttcagtaggttttagcagcaaaat 253  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||    
T  5521594 ttagcatgtttttcagtcattttcaataggttttaccagcaaaat 5521550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 15669337 - 15669389
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcag 234  Q
    ||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||    
T  15669337 ctgatgacaggtcatcttacattattcttggcatgattttcagtcaatttcag 15669389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 23054591 - 23054631
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  23054591 tgattacaagttatcttacattattcttagcatgtttttca 23054631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 22450537 - 22450486
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||| |||||||||||||| |||||| || |||||| |||||||||    
T  22450537 gtcatcttacgttattcttagcatgcttttcagtcgttttcattaggtttta 22450486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 17511001 - 17510901
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| |||||||||||| || |||||||||||||    
T  17511001 tgatgataggtcatcttacattattcttagcatgtttttcagtcactttcagtaggttttagctgcaaaaaggaggagtattagaacgattgcctatgat 17510902  T
Q  283 t 283  Q
    |    
T  17510901 t 17510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 15176441 - 15176532
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  15176441 gtcatcttacattattcttagcatgtgtttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 15176532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 20400432 - 20400331
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||||||||| || |||| |||||||    
T  20400432 ctgatgacaggtcatcttacgttattcttagcatgcttttcagtcattttcagtgggttttagcagcaaaaaggaggagtattagaacgatttcctatga 20400333  T
Q  282 tt 283  Q
    ||    
T  20400332 tt 20400331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 13313271 - 13313371
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||| |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| ||  ||||||||||||    
T  13313271 tgatgacatgtcgtcttacgttattcttagcatgtttttcagtcattttcaataggttttagcagcaaaaaggaggagtattagaacaattgcctatgat 13313370  T
Q  283 t 283  Q
    |    
T  13313371 t 13313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 19705084 - 19704983
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||| || | |||||||||| || ||||||||||||    
T  19705084 ctgatgacatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaggttttaacagcataaagaaggagtattagaacgattgcctatga 19704985  T
Q  282 tt 283  Q
    ||    
T  19704984 tt 19704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 24583173 - 24583271
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||| ||||| |||  ||||||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||| || ||||||||||||||    
T  24583173 atgacaggtcattttatgttattcttagcatgtttttcagtcatttttagtagattttagcagcaaaaaggaggagtattagaacgattgcctatgatt 24583271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 283
Target Start/End: Original strand, 23867827 - 23867929
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    |||||||||| |||||||||| | |||||||| ||||||||||  |||||| |||||||||||||||||||   ||||||||||| || |||||||||||    
T  23867827 tctgatgacaggtcatcttacgtaattcttagtatgtttttcaggcatttttagtaggttttagcagcaaagacgaggagtattagaacgattgcctatg 23867926  T
Q  281 att 283  Q
    |||    
T  23867927 att 23867929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 29380959 - 29381061
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaat-cattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    ||||||||| |||||||||| |||||||||||||||||||  || || ||||| |||||||||| ||||||| |||||||||||| || |||||||||||    
T  29380959 ctgatgacaggtcatcttacgttattcttagcatgtttttttattcaatttcaataggttttagtagcaaaaaggaggagtattagaacgattgcctatg 29381058  T
Q  281 att 283  Q
    |||    
T  29381059 att 29381061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 29765391 - 29765492
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaa-tcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||| |||||||||| |||||||||||||||||||  | | |||||||||||||||||||||||||| ||| | |||||| || ||||||||||||    
T  29765391 tgatgacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttagcagcaaaaaggaagtgtattagaacgattgcctatga 29765490  T
Q  282 tt 283  Q
    ||    
T  29765491 tt 29765492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 14271938 - 14271838
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||  |||||||   |||||||||| | | ||||||||||||    
T  14271938 tgatgacaggtcatcttacgttattcttagcatgtttttcaacctttttcagtaggttttactagcaaaacaaaggagtattagagtaattgcctatgat 14271839  T
Q  283 t 283  Q
    |    
T  14271838 t 14271838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 17100206 - 17100306
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||| |||| ||||||  |||||||||| |||||    
T  17100206 tgatgacaggtcatctcaagttattcttagcatgtttttcaattattttcataaggttttagcagcaaaaaggagaagtatttgaatgattgccaatgat 17100305  T
Q  283 t 283  Q
    |    
T  17100306 t 17100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 24380353 - 24380453
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||| ||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||| ||  ||||||||||| ||  ||||||||||||    
T  24380353 tgataacatgtcatcttacgttattcttagcatgtttttcactcaatttcagtaggttttaccagcagaacagaggagtattagaacaattgcctatgat 24380452  T
Q  283 t 283  Q
    |    
T  24380453 t 24380453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 25481505 - 25481605
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||||||| ||| |||| | ||| ||||||   |||||||||||||||||||||||| || |||||||||||||    
T  25481505 tgatgacaggtcatcttacgttattcttagcatgctttacaattaattttagtaggaaatagcagcaaaatggaggagtattagaacgattgcctatgat 25481604  T
Q  283 t 283  Q
    |    
T  25481605 t 25481605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 22501930 - 22501830
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||| ||||||||| |||||||||||||| |||||||| ||||||| ||||||||  ||||||||||| | | || |||||||||    
T  22501930 tgatgacatatcatcttacgttattcttatcatgtttttcaatctttttcagttggttttaccagcaaaacagaggagtattagagtaatcgcctatgat 22501831  T
Q  283 t 283  Q
    |    
T  22501830 t 22501830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 28621701 - 28621601
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||||| || ||||||||||||||||||||| | ||||||| ||||||||||||  |||| | | |||||||| || |||||||||||||    
T  28621701 tgatgacaggtcatctaacgttattcttagcatgtttttcagttattttcattaggttttagcataaaaaagaatgagtattagaacgattgcctatgat 28621602  T
Q  283 t 283  Q
    |    
T  28621601 t 28621601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 6886767 - 6886665
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttc--aatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    ||||||||||||||||||| ||||||||||||||||||||  | |  |||| ||||||||||| || |||||| ||||||||||| | | ||||||||||    
T  6886767 tgatgacaagtcatcttacgttattcttagcatgtttttcagacttttttttagtaggttttaccatcaaaatagaggagtattagagtaattgcctatg 6886668  T
Q  281 att 283  Q
    |||    
T  6886667 att 6886665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 21316880 - 21316798
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||| |||||||||||||||||||||||  |||| ||||| | | ||||||||||||| |||||||||    
T  21316880 tgatgacaggtcatcttacgttattcttagcatgtttttcaattctttttagtagttctaagcagcaaaatggcggagtatta 21316798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 24090892 - 24090978
Alignment:
Q  197 cttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||| ||||||||||||||||||||| | ||||| | |||||||||||||||||| ||| |||||||| ||  |||||||||||||    
T  24090892 cttacgttattcttagcatgtttttcagttattttaattaggttttagcagcaaaaaggaagagtattagaacaattgcctatgatt 24090978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 26829468 - 26829566
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||| |||||||||| ||||||||||||||||||||| |  |||| ||||||   ||||| ||||||||||||||| || || ||||||||||||||    
T  26829468 atgacacgtcatcttacgttattcttagcatgtttttcagtattttttagtaggaaatagcaacaaaatggaggagtaatagaacgattgcctatgatt 26829566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 18446859 - 18446959
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | |||||||||| ||||| ||| ||||||||||| | |||| ||||||| ||||||||||||| |||||||||||| ||  ||| ||||||||    
T  18446859 tgatgataggtcatcttacgttatttttaccatgtttttcagttatttccagtaggatttagcagcaaaaaggaggagtattagaaccatttcctatgat 18446958  T
Q  283 t 283  Q
    |    
T  18446959 t 18446959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 19265919 - 19265819
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||||||||||||||| |   ||| |||||| |||| || ||||| |||||||||||| ||  ||||||||||||    
T  19265919 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttaacaacaaaaaggaggagtattagaacaattgcctatgat 19265820  T
Q  283 t 283  Q
    |    
T  19265819 t 19265819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 24389853 - 24389757
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||||| |||||||||| |||||||||| | |||||| | | |||||||||||||||||||| |||||  ||||||||||| ||  |||||||||    
T  24389853 tgatgacaggtcatcttacgttattcttagtaagttttttagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattgcctat 24389757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 26139885 - 26139785
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | |||||||||| |||||||||||||||||||||||   ||| ||||||   ||||| ||||| |||||||||||| || |||||||||||||    
T  26139885 tgatgaaaggtcatcttacgttattcttagcatgtttttcaatttattttagtaggaaatagcatcaaaaaggaggagtattagaacgattgcctatgat 26139786  T
Q  283 t 283  Q
    |    
T  26139785 t 26139785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 21695413 - 21695472
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  21695413 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggtttt 21695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 4007151 - 4007233
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||  ||| | ||||||||||||||| ||||||| ||||||||| | ||||||||| |||||||||||    
T  4007151 tgatgacaggtcatcttatgttaatattagcatgtttttcagtcatttttagtaggtttcaccagcaaaatagaggagtatta 4007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 30117661 - 30117727
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    ||||| || ||||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  30117661 tgacaggttatcttacgttatttttagcatgtttttcattcattttcagtaggttttaccagcaaaa 30117727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 24520001 - 24520098
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||||||| ||| || || ||||||||||||||||||||| | |||||||||||| ||||| ||||||| |||  ||||||| ||  |||||||||    
T  24520001 ctgatgacaaatcaactcacgttattcttagcatgtttttcagttattttcagtaggatttagtagcaaaaaggataagtattagaacaattgcctat 24520098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 26888584 - 26888483
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||||  |||| |||| ||||| ||||||| ||||||| | ||||| |||||||||||||| ||||| |||||||||||  || ||||| ||||||    
T  26888584 ctgatgacagatcattttacgttatttttagcatatttttcatttatttttagtaggttttagcaacaaaaaggaggagtattggaacgattgtctatga 26888485  T
Q  282 tt 283  Q
    ||    
T  26888484 tt 26888483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 5152017 - 5151957
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    |||||||||||||||||||| ||||||||| ||||||||||| | ||||||||| ||||||    
T  5152017 ctgatgacaagtcatcttacgttattcttaacatgtttttcagtaattttcagttggtttt 5151957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 15557461 - 15557405
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    ||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  15557461 tgacatgtcatcttacattattcttagtctgtttttcagtcattttcagtaggtttt 15557405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 18836889 - 18836841
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  18836889 tgatgacagatcatcttacattattcttagcatgtttttcaatcatttt 18836841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 25227356 - 25227301
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtagg 238  Q
    |||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||    
T  25227356 tgatgacaggtcatcttacattattcttagcaggtttttcagttattttcagtagg 25227301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 24909001 - 24908919
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| ||||  |||| ||||| ||||||||||||||||||| ||||| |||||||||  |||| ||||||||| |||||    
T  24909001 tgatgacaggtcaaattacgttatttttagcatgtttttcaatcaatttcaataggttttacaagcagaatggaggaatatta 24908919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 24911222 - 24911140
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| ||||  |||| ||||| ||||||||||||||||||| ||||| |||||||||  |||| ||||||||| |||||    
T  24911222 tgatgacaggtcaaattacgttatttttagcatgtttttcaatcaatttcaataggttttacaagcagaatggaggaatatta 24911140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 13833603 - 13833656
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagta 236  Q
    ||||||||||| ||||||| |||||||| |||||||||||| ||||||||||||    
T  13833603 tgatgacaagtaatcttacgttattctttgcatgtttttcagtcattttcagta 13833656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 6286379 - 6286319
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| ||||||||||||||| |||| |||| ||| |||||||||||    
T  6286379 tgatgacaggtcatcttacgttattcttagcatgtctttctatcaattttagtaggtttta 6286319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 17650058 - 17650006
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagt 235  Q
    ||||||||||||||||||| ||||||||| ||||||||||| || ||||||||    
T  17650058 tgatgacaagtcatcttacgttattcttaacatgtttttcagtcgttttcagt 17650006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 28858932 - 28858873
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| | ||||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  28858932 tgatgacaggccatcttacattattcttagcatg-ttttcagtcatttttagtaggtttta 28858873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 24381325 - 24381424
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatg-tttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||| |||||||||  |||||||||||||| ||||||| ||| |||||| |||||||| ||||| ||  ||||||||||  ||  |||||||||||    
T  24381325 tgatgacaggtcatcttaagttattcttagcatgttttttcagtcaatttcagcaggttttaccagcagaacagaggagtattttaacaattgcctatga 24381424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 18007620 - 18007551
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| ||||| ||||||| ||||||| ||||||||||||||||||| || |||||||| ||| |||||    
T  18007620 atcttacgttattgttagcat-tttttcagtcattttcagtaggttttaccaacaaaatggtggaatatta 18007551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 28275323 - 28275364
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  28275323 ctgatgacaaatcatcttacgttattcttagcatgtttttca 28275364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 28903979 - 28904067
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagc-aaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||| |||||||||| |||||  ||||||||||||||||||||||| || | ||||| ||||||||||| ||  ||||| |||||||    
T  28903979 atcttacgttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatt 28904067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 19791490 - 19791390
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||| ||||  ||||||||||||||| ||  ||| | ||||||||| |||||||   ||||||||||||||  |||| |||||||    
T  19791490 tgatgacagatcatcttacgttataattagcatgtttttcagtctattttaataggttttaccagcaaaccagaggagtattaaaacaattgtctatgat 19791391  T
Q  283 t 283  Q
    |    
T  19791390 t 19791390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 24381995 - 24382047
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttag 244  Q
    |||||||| | ||||||||||||||| ||| | ||||||||||||||||||||    
T  24381995 gtcatctttcgttattcttagcatgtattttagtcattttcagtaggttttag 24382047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 24750922 - 24750883
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttc 222  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  24750922 tgatgacatgttatcttacattattcttagcatgtttttc 24750883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 14077216 - 14077159
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||||||||||| || |||||| ||||||||| | ||||||| |||||||||||    
T  14077216 atgacaagtcatcttacgttcttcttaacatgttttttagtcatttt-agtaggtttta 14077159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 15058506 - 15058564
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||| |||  |||| ||||||||||||||||||| | ||||||| |||||||||||    
T  15058506 atgacaaatcaatttacgttattcttagcatgttttttagtcatttttagtaggtttta 15058564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 7985199 - 7985130
Alignment:
Q  198 ttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaa 267  Q
    |||| ||||||||| ||||| ||||| |||  || ||||||||||| ||||||||  |||||||||||||    
T  7985199 ttacgttattcttaacatgtatttcagtcaaatttagtaggttttaccagcaaaacagaggagtattaaa 7985130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 17835631 - 17835558
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||||| |||||||||| || ||||||| | | |||||||||||||||  |||| ||| | |||||||||    
T  17835631 gtcatcttacgttattcttagtatatttttcagttaatttcagtaggttttacaagcagaatagtggagtatta 17835558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 24105520 - 24105577
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttag 244  Q
    |||| |||||||||| |||| |||||||||||||||| | ||| |||||||| |||||    
T  24105520 gacaggtcatcttacgttatgcttagcatgtttttcagttattctcagtaggatttag 24105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 12342891 - 12342951
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| ||||||||| | ||||||||| ||  ||| |||||||||||    
T  12342891 tgatgacatgtcatcttacgttattcttaacttgtttttcagtctattttagtaggtttta 12342951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 17998351 - 17998315
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgttt 219  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  17998351 tgataacaggtcatcttacattattcttagcatgttt 17998315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 24518588 - 24518647
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| ||||||| || |||||||||| |||||||| | | |||||||||||||||||    
T  24518588 tgatgacatgtcatctaacgttattcttagtatgttttt-agttattttcagtaggtttta 24518647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 17384120 - 17384020
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| |||||||||||| |||||||||||| |||    
T  17384120 tgatgacagatcatcttacattattcttagcatgtttttcagttattttcattaggttttagcagcaaaaaggaggagtattacaatgattgcctaagat 17384021  T
Q  283 t 283  Q
    |    
T  17384020 t 17384020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 24469894 - 24469795
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||| || ||||||||||||||    
T  24469894 gatgacaggtcatcttacgttatttttagtatgtttttcaatcattttcagtaggttttgacagcaaaaaggaggagtattagaacgattgcctatgatt 24469795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 14641729 - 14641629
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| || ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||  ||| ||||||||    
T  14641729 tgatgacaggttatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattacctatgat 14641630  T
Q  283 t 283  Q
    |    
T  14641629 t 14641629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 22404254 - 22404354
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||| | ||||||||| ||||||||||| | | |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  22404254 tgatgacatgtcatctttcgttattcttatcatgtttttcagtaaatttcagtaggttttagcagcaaaaaggaggagtattaaaacgattgtctatgat 22404353  T
Q  283 t 283  Q
    |    
T  22404354 t 22404354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 24480121 - 24480021
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||  || ||||| |||||||    
T  24480121 tgatgataggtcatcttacgttattcttagcatgtatttcaatcattttcagtaggttttggcagcaaaaaggaggagtattggaacgattgtctatgat 24480022  T
Q  283 t 283  Q
    |    
T  24480021 t 24480021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 17822027 - 17822124
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaa-tcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||| |||||||||| |||||||||||||||||||| | | ||||||| |||| ||||||||||||| |||||||||||| || ||||||||||||||    
T  17822027 gacatgtcatcttacgttattcttagcatgtttttctagttattttcaataggatttagcagcaaaaaggaggagtattagaacgattgcctatgatt 17822124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 19577562 - 19577637
Alignment:
Q  208 cttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||||||| | | |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  19577562 cttagcatgttttttagttattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 19577637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 22564558 - 22564631
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||||  |||||||||||    
T  22564558 gtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtatta 22564631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 9519829 - 9519729
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||| ||||||||| ||||| ||||||||||||| | | |||||||||||  ||||||||||||| |||||||||||| |   ||||||||||||    
T  9519829 tgatgacaattcatcttacgttatttttagcatgttttttagttattttcagtagtatttagcagcaaaaaggaggagtattagagcaattgcctatgat 9519730  T
Q  283 t 283  Q
    |    
T  9519729 t 9519729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 14076493 - 14076393
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||||||||||| |||||| | |||||||||| | ||||||||||||  |||||||||||| |   ||||||||||||    
T  14076493 tgatgacaggtcatcttacgttattcttagcatggttttcagttattttcagtatgatttagcagcaaagaggaggagtattagagaaattgcctatgat 14076394  T
Q  283 t 283  Q
    |    
T  14076393 t 14076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 14723771 - 14723683
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    ||||||||| |||||||||||||| |||||| | ||||||| |||| ||||| ||||||| |||||||||||| |||||||| ||||||    
T  14723771 tcatcttacgttattcttagcatgcttttcagttattttcaataggatttaggagcaaaaaggaggagtattagaatgattgtctatga 14723683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 21760407 - 21760507
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||| ||||  ||||||||||||| ||||||| ||||||||| |||  ||||||||||||| |||||| ||||| ||||||| ||||||||    
T  21760407 tgatgacaggtcaccttaagttattcttagcatatttttcagtcattttcaatagaatttagcagcaaaaaggaggattattagaatgatttcctatgat 21760506  T
Q  283 t 283  Q
    |    
T  21760507 t 21760507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 14078135 - 14078034
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatca-ttttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||| ||||||||||||||||||||||||| |||| | | | ||||||||||| ||||||||||||  |||||||||||| |   |||||||||||    
T  14078135 tgatgacaggtcatcttacattattcttagcatggtttttagttatttttcagtaggatttagcagcaaagaggaggagtattagagcaattgcctatga 14078036  T
Q  282 tt 283  Q
    ||    
T  14078035 tt 14078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 19593975 - 19594076
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaa-tcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||||||| |||||  ||| |||||||||||||||  | | ||||||||||||||||||| |||||| |||||||||||| ||  |||||||||||    
T  19593975 tgatgacaagtcgtcttatgttaatcttagcatgtttttttagttattttcagtaggttttagctgcaaaaaggaggagtattagaacaattgcctatga 19594074  T
Q  282 tt 283  Q
    ||    
T  19594075 tt 19594076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 21687129 - 21687198
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||| ||| ||||||||||| ||||||||    
T  21687129 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaaa 21687198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 1636730 - 1636635
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    ||||||||  ||||||||| ||||||||||||||||||||| | ||||| ||||||||||||| |||||| ||| |||||||| ||  |||||||||    
T  1636730 tgatgacagatcatcttacgttattcttagcatgtttttcagttatttttagtaggttttagcggcaaaaagga-gagtattagaacaattgcctat 1636635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 4340761 - 4340677
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaa 267  Q
    ||||||||  ||||||||| ||||| |||| ||||||||||   ||||||||||||||||||||| |||| ||||||||||||||    
T  4340761 tgatgacagatcatcttacgttatttttagtatgtttttcagatattttcagtaggttttagcagtaaaaaggaggagtattaaa 4340677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 9841114 - 9841034
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| ||||||||| ||||||||| ||||| ||| | ||||||||||||||||||| ||||| || ||||||||||||    
T  9841114 atgacaaatcatcttacgttattcttaacatgtgttttagtcattttcagtaggttttaccagcagaaaggaggagtatta 9841034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 21152511 - 21152591
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||| ||||||||||||||||| ||||| |||||| || |||||||||| |||||||||||| || ||||| ||||||||    
T  21152511 ttatttttagcatgtttttcaattatttttagtaggattaagcagcaaaaaggaggagtattagaacgattgtctatgatt 21152591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 11137002 - 11136915
Alignment:
Q  196 tcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||||||||||||||||||||| |   ||| |||||| ||||| ||||||| |||||| ||||| ||||||||| |||||||    
T  11137002 tcttacattattcttagcatgtttttcagtttattttagtaggatttagtagcaaaaaggaggattattagaatgattgcatatgatt 11136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 23644318 - 23644417
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||| || ||||||| |||||||||||||||||||||||  |||| ||||||||||| ||||||||   |||||||||| |   |||||||||||||    
T  23644318 gatgacaggttatcttacgttattcttagcatgtttttcaattgtttttagtaggttttaccagcaaaacataggagtattagatcaattgcctatgatt 23644417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 8038050 - 8038132
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| |||||||||| ||||||||||| |||||||||||| |||||| || ||| || |||||| | ||||||||||||    
T  8038050 tgatgacaggtcatcttacgttattcttagcctgtttttcaatctttttcactaagttataccagcaataaggaggagtatta 8038132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 27961302 - 27961252
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  27961302 gtcatcttacgttattcttaacatgtttttcaatcattttcagtaggtttt 27961252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 22845862 - 22845947
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||||| ||| ||||||||||||||||| | |||||||||| |||||| || ||||| |||||||||||| ||  |||||||||    
T  22845862 catcttacgttactcttagcatgtttttcagttattttcagtatgttttaacaacaaaaaggaggagtattagaacaattgcctat 22845947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 18171253 - 18171353
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||| ||||||||||||||||||||||| |    || | ||||   ||||| ||||| |||||||||||| ||||||||||||||||    
T  18171253 tgatgacaggtcatcttgcattattcttagcatgtttttcagtttactttaataggaaatagcaccaaaaaggaggagtattagaatgattgcctatgat 18171352  T
Q  283 t 283  Q
    |    
T  18171353 t 18171353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 19246374 - 19246291
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||| ||||||| || ||||||| ||||||||||||| ||  ||| ||||||||||| ||||||||| || ||||||||    
T  19246374 ctgatgacaggtcatctaacgttattctaagcatgtttttcagtctattttagtaggttttaacagcaaaatagatgagtatta 19246291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 9848260 - 9848178
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| ||||| | || ||||||||| ||||||||||| ||||||| |||||||||||  ||||||| ||| ||||||||    
T  9848260 tgatgacatgtcatttgacgttattcttaacatgtttttcagtcatttttagtaggttttattagcaaaaaggatgagtatta 9848178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 23087116 - 23087158
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcag 234  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  23087116 gtcatcttacattattcttagtatgtttttcaatcattttcag 23087158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 14727231 - 14727171
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| ||||| ||| ||||||||||| ||||||| |||||||||||    
T  14727231 tgatgacaggtcatcttacgttattattaccatgtttttcagtcatttttagtaggtttta 14727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 17847857 - 17847777
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||||||||||||| | | ||||| |||| |||||||||||||||  || |||||||| || ||||| ||||||||    
T  17847857 ttattcttagcatgttttttagttattttaagtaagttttagcagcaaaaatgaagagtattagaacgattgtctatgatt 17847777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 26820955 - 26820896
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttag 244  Q
    |||||| |||||||||| ||| ||||||||||||||||| | ||||||| ||||||||||    
T  26820955 atgacaggtcatcttacgttactcttagcatgtttttcagttattttcattaggttttag 26820896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 15600423 - 15600496
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||||||||||| ||| |||||||||| || |||  ||| ||||||||||||||||   ||||||||||    
T  15600423 gtcatcttacattattcgtagtatgtttttcagtcgtttgtagtgggttttagcagcaaaacacaggagtatta 15600496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 19721843 - 19721927
Alignment:
Q  180 ttctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||||| ||||| ||| ||||||||||  |||||||| | ||| |||||||||||||||  |||| ||| |||||||||||    
T  19721843 ttctgatgacaggtcatattaaattattcttaaaatgttttt-agtcaatttcagtaggttttacaagcagaatagaggagtatta 19721927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 21932562 - 21932489
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttca-gtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||  ||||||||||||||||||| || |||||||| || |||||||  ||||||| ||||||||||||    
T  21932562 tcatcttaagttattcttagcatgttttttaaacattttcatgtgggttttaatagcaaaaaggaggagtatta 21932489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 21845737 - 21845829
Alignment:
Q  192 gtcatcttacattattcttagcatgttttt-caatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||| ||||||||| ||||||||| || |||||||||  || |||||| || |||  |||||| ||||| || ||||||||||||||    
T  21845737 gtcatcttacgttattcttaacatgttttttcagtcattttcaaaagtttttagaagaaaagaggaggattattataacgattgcctatgatt 21845829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 8066704 - 8066649
Alignment:
Q  228 ttttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||| |||||||||||||| ||| |||||||| ||| |||| ||||||||    
T  8066704 ttttcagtagattttagcagcaaaaaggaagagtattagaataattgtctatgatt 8066649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 17379461 - 17379500
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  17379461 gatgacaattcatcttacgttattcttagcatgtttttca 17379500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 21037017 - 21036958
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    ||||||||| | ||||||| ||||||||||| | ||||| |||||||||||||| |||||    
T  21037017 tcatcttacgtcattcttatcatgtttttcagttatttttagtaggttttagcaacaaaa 21036958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 21060431 - 21060486
Alignment:
Q  210 tagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||||||||| ||||||||| |||||||||  | |||||| |||||||||||    
T  21060431 tagcatgtttttcagtcattttcaataggttttaaaaccaaaatagaggagtatta 21060486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 21079748 - 21079803
Alignment:
Q  210 tagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||||||||| |||||| |||||||||||  | |||||| |||||||||||    
T  21079748 tagcatgtttttcaaccatttttagtaggttttaaaaccaaaatagaggagtatta 21079803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 31878848 - 31878906
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttt 241  Q
    |||||| | |||||||||| ||||||||||||||||||||| ||  ||| |||||||||    
T  31878848 tgatgagaggtcatcttactttattcttagcatgtttttcagtctattttagtaggttt 31878906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 8246706 - 8246650
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||| ||||  ||||||||||||| ||||||| ||||||| |||||||||||    
T  8246706 tgacaagtcaccttatgttattcttagcat-tttttcagtcatttttagtaggtttta 8246650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 13216314 - 13216387
Alignment:
Q  193 tcatcttacattattcttagcatg-tttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||| |||||||||||||| ||||||| ||||||| | ||||||||  || |||| | |||||||||||    
T  13216314 tcatcttacgttattcttagcatgttttttcagtcatttttaataggttttgccatcaaagtagaggagtatta 13216387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 23005246 - 23005283
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttt 220  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  23005246 tgatgtcaagttatcttacattattcttagcatgtttt 23005283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 23783137 - 23783100
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttt 220  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  23783137 tgatgtcaagttatcttacattattcttagcatgtttt 23783100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 242
Target Start/End: Complemental strand, 32760040 - 32760007
Alignment:
Q  209 ttagcatgtttttcaatcattttcagtaggtttt 242  Q
    ||||||||||||||| ||||||||||||||||||    
T  32760040 ttagcatgtttttcagtcattttcagtaggtttt 32760007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 3358226 - 3358190
Alignment:
Q  196 tcttacattattcttagcatgtttttcaatcattttc 232  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  3358226 tcttacatttttcttagcatgtttttcagtcattttc 3358190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 9338978 - 9339034
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggt 239  Q
    |||| ||| |||||||||| | ||||||| ||||||||||| ||||||||| |||||    
T  9338978 tgataacatgtcatcttacgtcattcttaacatgtttttcagtcattttcaataggt 9339034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 10505243 - 10505195
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    ||||||||||| ||||||| |||| |||||||| ||||||| |||||||    
T  10505243 tgatgacaagttatcttacgttatacttagcatatttttcagtcatttt 10505195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 26313275 - 26313179
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| | | |||||||| || ||| ||||||    
T  26313275 tgatgacaagtcatcttacattattcttagcatgttttttaatcaatttcagtaggttttagcagcaaaaagaatgagtattagaacgatcgcctat 26313179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 27907522 - 27907622
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||| ||||||||||  ||||||||||||    
T  27907522 tgatgataggtcaccttacattattcttagcatgtttttcagtcattttcagtaagttttagcaacaaaaaggagaagtattaaaactattgcctatgat 27907621  T
Q  283 t 283  Q
    |    
T  27907622 t 27907622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 28918285 - 28918186
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||| |||| |||| ||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||||| ||  ||||||||||||    
T  28918285 tgatgacaaatcattttacgttattcttagcatgtttttcagtcattttcagtaggttttagctacaaaaaggaggagtattagaacaattgcctatgat 28918186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 17891828 - 17891728
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||| ||||||||  ||||||||||| | | ||| ||||||||    
T  17891828 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttaccagcaaaacagaggagtattagagtaatttcctatgat 17891729  T
Q  283 t 283  Q
    |    
T  17891728 t 17891728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 18758386 - 18758298
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||| ||||| ||||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||| || ||||||||||||||    
T  18758386 atcttacgttatttttagcatgttttttaattattttcagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatgatt 18758298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 21905823 - 21905723
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||  ||||||||||||||||||||| |||||||| ||| |||||||||| |||| |||||||||||| |||||| || ||||||    
T  21905823 tgatgacaggtcatcttatgttattcttagcatgtttttcagtcattttctgtatgttttagcaggaaaaaggaggagtattagaatgatagcttatgat 21905724  T
Q  283 t 283  Q
    |    
T  21905723 t 21905723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 23010043 - 23010125
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||||||| | ||||||||||    
T  23010043 tgataacaagtcatcttacgttattcttagcatgtttttcagtcattttcaataggttttaccagcaaaacgaaggagtatta 23010125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 17351075 - 17350975
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||||||||| |||||  ||||||||||| ||  |||| |||||||    
T  17351075 tgatgacaagtcatcttacgttattcttaacatatttttcagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattgtctatgat 17350976  T
Q  283 t 283  Q
    |    
T  17350975 t 17350975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 16157084 - 16157143
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16157084 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggtttt 16157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 18120546 - 18120645
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||| |||||||||| ||||||||||||||||||||| |   ||| ||||||   |||||||||||||||||||||||| || ||||||||||||||    
T  18120546 gatgacatgtcatcttacgttattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaatggaggagtattagaacgattgcctatgatt 18120645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 35680099 - 35680182
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||| | |||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||||||  |||||||||||    
T  35680099 ctgatgacaggccatcttacgttattcttagcatgtttttaagtcattttcagtaggttttaccagcaaaacagaggagtatta 35680182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 29144732 - 29144631
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagc-agcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||| |||||||||| ||||||||||||||||||| | |||||  || ||||||||||| ||||||| |||||| ||||| ||||||| |||||||    
T  29144732 tgatgacaggtcatcttacgttattcttagcatgttttttagtcattaccaataggttttagcaagcaaaaaggaggaatattagaatgatttcctatga 29144633  T
Q  282 tt 283  Q
    ||    
T  29144632 tt 29144631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 24086310 - 24086406
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||| |||| ||||| ||||||||||||||||||||| |   ||| |||||| ||||||||||||| |||||||||||| || ||||||||||||||    
T  24086310 gacaggtcaacttacgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaggaggagtattagaacgattgcctatgatt 24086406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 25196708 - 25196608
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||  ||||||||| ||||||||||| |   ||| |||||| |||||||||||||  ||| |||||||||| |||||||||||||    
T  25196708 tgatgacatgtcatcttatgttattcttaacatgtttttcagtttattttagtaggatttagcagcaaaaaagagaagtattaaaacgattgcctatgat 25196609  T
Q  283 t 283  Q
    |    
T  25196608 t 25196608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 25532333 - 25532233
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||| |||||||| |||| ||||||||||||||||||||| |   ||| ||||||   ||||||||||| |||||||||||| || |||||||||||||    
T  25532333 tgatggcaagtcattttacgttattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatgat 25532234  T
Q  283 t 283  Q
    |    
T  25532233 t 25532233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 25886191 - 25886291
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||| ||| ||||||||||  ||||||||| ||||||||||||  |||| ||| |||||||| || ||||| |||||||    
T  25886191 tgatgacaggtcatcttacgttatttttatcatgtttttctgtcattttcattaggttttagcataaaaaaggaagagtattagaacgattgtctatgat 25886290  T
Q  283 t 283  Q
    |    
T  25886291 t 25886291  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 22569142 - 22569051
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||  ||||||||| ||||||||||| ||| ||||||||||||||||||| ||||  ||| ||||||| || |||| |||||||||    
T  22569142 gtcatcttatgttattcttaccatgtttttcagtcaatttcagtaggttttagcagaaaaaatgagaagtattagaacgattacctatgatt 22569051  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 283
Target Start/End: Original strand, 27540270 - 27540365
Alignment:
Q  188 acaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||| |||| ||| ||||||||| ||||||| ||||||||||||||||||||||  ||||  ||||| ||||| || ||||  ||||||||    
T  27540270 acaagtcatattacgttactcttagcatatttttcagtcattttcagtaggttttagcataaaaaatgaggaatattagaacgattttctatgatt 27540365  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 34574613 - 34574510
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgt-ttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||| ||| |||||||||| ||||||||||||||| |||| | | |||||||||||||||||  || |||  |||||||||||| || || |||||||    
T  34574613 tctgattacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttaatagaaaataggaggagtattagaacgaatgcctat 34574514  T
Q  280 gatt 283  Q
    ||||    
T  34574513 gatt 34574510  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 25537655 - 25537553
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |   ||| ||||||   || ||| |||| |||||||||||| |  |||||||||||    
T  25537655 tctgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggaaataacagtaaaaaggaggagtattagagcgattgcctatg 25537556  T
Q  281 att 283  Q
    |||    
T  25537555 att 25537553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 26651637 - 26651695
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttt 241  Q
    |||| |||||||||||||||||||| ||| ||||||||| | |||||||||||||||||    
T  26651637 tgattacaagtcatcttacattatttttaacatgtttttgagtcattttcagtaggttt 26651695  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 22627455 - 22627399
Alignment:
Q  209 ttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||  ||||||||||    
T  22627455 ttagcatgttttttagtcattttcagtaggttttaccagcaaaatataggagtatta 22627399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 283
Target Start/End: Complemental strand, 28930371 - 28930271
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgttttt-caatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||| || ||||||| ||||  ||||||||||||| || |||||||||||| |||||||| ||||||  ||||| ||||| ||  ||||||||||||    
T  28930371 gatgacaggtaatcttacgttatgtttagcatgttttttcagtcattttcagtatgttttagctgcaaaaatgaggaatattagaacaattgcctatgat 28930272  T
Q  283 t 283  Q
    |    
T  28930271 t 28930271  T

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Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 29717358 - 29717418
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaatca-ttttcagtaggtttta 243  Q
    |||||||||  ||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  29717358 gatgacaagatatcttaggttattcttagcatgtttttcaatcatttttcagtaggtttta 29717418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 18553386 - 18553304
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| ||| ||||||||||||||||| ||||||||||||||| |  ||| | ||||||||| ||| ||||  |||||||||||    
T  18553386 tgattacaggtcatcttacattattcctagcatgtttttcaacctattttaataggttttaccagtaaaacagaggagtatta 18553304  T

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Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 32137912 - 32137972
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| |||||||||  |||||| ||| ||||||| |||||||||||    
T  32137912 tgatgacaggtcatcttacgttattcttattatgtttatcagtcatttttagtaggtttta 32137972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 16257958 - 16257875
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||| ||| |||||||||  ||||||||| ||||||||||| || |||| ||||| ||||| ||||||||  ||| |||||||    
T  16257958 ctgatcacaggtcatcttatgttattcttaacatgtttttcagtcgtttttagtagattttaccagcaaaaccgagaagtatta 16257875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 25882581 - 25882639
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    |||||||| ||||| ||||||||||||||| ||| ||| ||||||||||  ||||||||    
T  25882581 catcttacgttatttttagcatgtttttcagtcaattttagtaggttttgccagcaaaa 25882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 28766947 - 28766889
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||| |||||||||| ||||||||| |||||||||||||   ||| |||||||||||    
T  28766947 atgacaggtcatcttacgttattcttaacatgtttttcaatatattttagtaggtttta 28766889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 29851109 - 29851031
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| ||||||| | |||||||||| ||||||||||||||  ||| ||||||||||| | ||||| |  ||||||||||    
T  29851109 gacaggtcatctaaaattattcttaacatgtttttcaatcgattttagtaggttttatcggcaaactaaaggagtatta 29851031  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 34179307 - 34179345
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgttttt 221  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  34179307 tgatgacaagtcatcttacattatttttagtatgttttt 34179345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 18970775 - 18970833
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||||||||| |||||||| ||||  ||||||  ||||||||||||||||||    
T  18970775 tgatgacatgtcatcttacgttattctttgcat--ttttcaggcattttcagtaggtttta 18970833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 16042663 - 16042711
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    |||||||||| |||||||| ||||||||| ||| | |||||||||||||    
T  16042663 tgatgacaagccatcttacgttattcttaacatatgtttcaatcatttt 16042711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 20379383 - 20379283
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||||||| |  |||||||||| |||||||||| |   ||| ||||||   ||| ||||||| |||||||||||| || ||||| |||||||    
T  20379383 tgatgacaggtcatctaatgttattcttaggatgtttttcagtttattttagtaggaaataggagcaaaaaggaggagtattagaacgattgtctatgat 20379284  T
Q  283 t 283  Q
    |    
T  20379283 t 20379283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 4901 - 4821
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  4901 ttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 4821  T

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Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 23387567 - 23387647
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  23387567 ttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatgatt 23387647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 28666579 - 28666489
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||    
T  28666579 tcatcttatgttattcttatcatgtttttcattcattttcagtaggttttagcagcaaaaaggagaagtattagaatgactgcctatgatt 28666489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 24162014 - 24162111
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||| ||||| |||| ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||| ||||||| ||| |||||||||||||    
T  24162014 tgacaggtcattttacgttattcttagcatgtttttcagtcattttcaatagattttaccagcaaaatggagaagtattagaataattgcctatgatt 24162111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 20860436 - 20860336
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||| | ||||||||||||||| | |||||||||||||||||||||||||| |||| ||||||| ||  ||||||||||||    
T  20860436 tgatgacaggtcatcttacgttactgttagcatgtttttcattaattttcagtaggttttagcagcaaaaaggagaagtattagaacaattgcctatgat 20860337  T
Q  283 t 283  Q
    |    
T  20860336 t 20860336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 17469569 - 17469658
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||| |   |||||||||||||    
T  17469569 catcttacgttattcttagcatgtttttcaatcattttcagcaggttttaccagcaaaacagaggagtattagagcaattgcctatgatt 17469658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 19003765 - 19003865
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| || ||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||| ||| |||||||| ||  |||| |||||||    
T  19003765 tgatgacatgtgatcttacgttattcttggcatgtttttcagttattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgtctatgat 19003864  T
Q  283 t 283  Q
    |    
T  19003865 t 19003865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 23338988 - 23338889
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| |||| | | || ||||| || |||||||||||||    
T  23338988 tgatgacaggtcatcttaggttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaaga-tattagaacgattgcctatgat 23338890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 34132183 - 34132083
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||| || |||||||||| |||||||||||||||||||||   ||||||| |||||||||||||||||| |||| ||||||| || || ||||||||||    
T  34132183 tgatggcatgtcatcttactttattcttagcatgtttttcagctattttcattaggttttagcagcaaaaaggagaagtattagaacgactgcctatgat 34132084  T
Q  283 t 283  Q
    |    
T  34132083 t 34132083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 29988054 - 29987953
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagc-aaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||| |||||||||| ||||| ||||||||||||||| ||||||| ||||| |||||||||| |||| || ||||||||| || |||||| |||||    
T  29988054 tgatgacaggtcatcttacgttatttttagcatgtttttcagtcatttttagtagattttagcagcaaaaaaggtggagtattagaacgattgcatatga 29987955  T
Q  282 tt 283  Q
    ||    
T  29987954 tt 29987953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 25400738 - 25400829
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattg 274  Q
    |||||| | ||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||||| |||| |||||| ||||| || |||||    
T  25400738 tgatgagaggtcattttacgttattcttagcatgtttttcagtcattttcattaggttttagcaggaaaaaggaggaatattagaacgattg 25400829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 24320522 - 24320604
Alignment:
Q  184 gatgacaagtcatcttacattattcttagcatgtttttcaat-cattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||| |||||||||| ||||||||| |||||||||  || ||||||||||||||||||||||||||| || |||||||||    
T  24320522 gatgacaggtcatcttacgttattcttaacatgtttttttattcattttcagtaggttttagcagcaaaaaggcggagtatta 24320604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 24658299 - 24658400
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcat-gtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||| | |||||||||| ||||| ||| | | |||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||| ||||||||    
T  24658299 tgatgaaaggtcatcttacgttatttttaactttgtttttcaatcatttttagtaggttttagcagcaaaaaggaggagtattagtaagatagcctatga 24658398  T
Q  282 tt 283  Q
    ||    
T  24658399 tt 24658400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 19006848 - 19006948
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||  |||||||||||||||||||| |||||||||| |   ||| ||||||   ||||| |||||||||||||||||| || |||||||||||||    
T  19006848 tgatgacagatcatcttacattattcttagtatgtttttcagtttattttagtaggaaatagcaacaaaatggaggagtattagaacgattgcctatgat 19006947  T
Q  283 t 283  Q
    |    
T  19006948 t 19006948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 19053198 - 19053102
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctat 279  Q
    |||||||| ||||| |||| ||||||||||||||||| ||| | ||||||||||| ||||  |||||||| |||||||||||| ||  |||||||||    
T  19053198 tgatgacatgtcattttacgttattcttagcatgtttatcagttattttcagtagatttttacagcaaaaaggaggagtattagaacaattgcctat 19053102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 25572478 - 25572538
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||    
T  25572478 tgatgacaagtcatcctacgttattcttagcatgtttttcagtcaatttcagtaggtttta 25572538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 26069346 - 26069246
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    ||||||||||| ||||||| ||||||||| ||||||||| | ||||||||||||| ||||| ||||| ||  ||||||||||| ||  ||||| ||||||    
T  26069346 tgatgacaagttatcttacgttattcttaacatgttttttagtcattttcagtagattttaccagcagaacagaggagtattagaacaattgcttatgat 26069247  T
Q  283 t 283  Q
    |    
T  26069246 t 26069246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 26117534 - 26117474
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  26117534 tgatggcatgtcatcttacattattcttagcatgttttttaatcattttcagcaggtttta 26117474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 22797422 - 22797520
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||| |||||||||| ||||| || |||||||||||| ||||||||  |||||||||  ||||||| |||| ||||||| |  ||||||||||||||    
T  22797422 atgacaggtcatcttacgttattattcgcatgtttttcagtcattttcgataggttttattagcaaaaaggagaagtattagagcgattgcctatgatt 22797520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 26122479 - 26122397
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| || |||||| |||||||||||||||||||| | || |||| ||||||||||| ||||||||  |||||||||||    
T  26122479 tgatgacaggttatcttaaattattcttagcatgttttttagtcgtttttagtaggttttaccagcaaaacagaggagtatta 26122397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 34488954 - 34488872
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||| || |||||||||| ||||||||||||||||||||| ||||||| |||||| |||| ||||||||  || ||||||||    
T  34488954 tgatggcaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggatttaccagcaaaacagatgagtatta 34488872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 18832310 - 18832237
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||||||||||| ||||||||||||||| || |||||| ||||||||| || |||||  |||||||||||    
T  18832310 gtcatcttacattatttttagcatgtttttcagtctttttcaataggttttaccaacaaaacagaggagtatta 18832237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 23266914 - 23266853
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||| |||||||||||||||| || |||||||||| | |||||||||||||||||||    
T  23266914 ctgatgacaggtcatcttacattatttttggcatgttttttagtcattttcagtaggtttta 23266853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 20548453 - 20548553
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| |||||| |||||||||||||| |   ||| ||||||   ||||| |||||||||||||||||| || |||||||| ||||    
T  20548453 tgatgacaggtcatcttacgttattcctagcatgtttttcagtttattttagtaggaaatagcaacaaaatggaggagtattagaacgattgcctgtgat 20548552  T
Q  283 t 283  Q
    |    
T  20548553 t 20548553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 23214825 - 23214905
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtat 263  Q
    |||||||| |||||||||| ||||||||||||||||||||| | ||||||| ||   ||||||| ||||| ||||||||||    
T  23214825 tgatgacaggtcatcttacgttattcttagcatgtttttcagttattttcaatacagtttagcaacaaaaaggaggagtat 23214905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 29799143 - 29799039
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    ||||||||||  |||||||| ||||||||||| |||||||| | ||||||| | |||||| || ||||||||| ||||||||| | ||  |||| |||||    
T  29799143 tctgatgacacatcatcttatattattcttagtatgttttttagtcatttttaataggttctaccagcaaaatagaggagtataagaacaattgtctatg 29799044  T
Q  281 attct 285  Q
    |||||    
T  29799043 attct 29799039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 23110191 - 23110278
Alignment:
Q  178 acttctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| |||||||  |||||||||| ||||||||| ||||||||| | ||||| || |||||||||| ||||||||  |||||||||||    
T  23110191 acttatgatgacgtgtcatcttacgttattcttaacatgttttttagtcattatcggtaggttttaacagcaaaacagaggagtatta 23110278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 19761581 - 19761639
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttt 241  Q
    |||||||| |||||||||| ||||| |||||||||| |||| |||||||||||||||||    
T  19761581 tgatgacaggtcatcttacgttattattagcatgttattcagtcattttcagtaggttt 19761639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 25920918 - 25920828
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    ||||||||| ||||||||||||| |||||   |||||||||||||| |||| |||||||| ||| |||||||| |   |||||||||||||    
T  25920918 tcatcttacgttattcttagcatatttttttgtcattttcagtaggatttaccagcaaaacggatgagtattagagcaattgcctatgatt 25920828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 15691361 - 15691304
Alignment:
Q  187 gacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttag 244  Q
    |||| |||||||||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  15691361 gacatgtcatcttacgttattcttagcatattttttagtcattttcagtaggttttag 15691304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 24142504 - 24142404
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||  ||||||||||||||||||||| |   ||| |||||  ||||||| |||||  ||||||||||| || |||| ||||||||    
T  24142504 tgatgacatgtcatcttatgttattcttagcatgtttttcagtttattttagtagaatttagcatcaaaaaagaggagtattagaaagatttcctatgat 24142405  T
Q  283 t 283  Q
    |    
T  24142404 t 24142404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 31600075 - 31600175
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| ||| |||||| ||||||||||||||||||| | || ||||| |||||||||| || |||||  || |||||||| | | |||| |||||||    
T  31600075 tgatgacaggtcctcttacgttattcttagcatgtttttaagtctttttccgtaggttttaccaacaaaacagaagagtattagagtaattgtctatgat 31600174  T
Q  283 t 283  Q
    |    
T  31600175 t 31600175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 18939619 - 18939548
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa 252  Q
    |||||||||| |||||||||| ||||||||| ||||||||||| || | || |||| |||||| ||||||||    
T  18939619 tctgatgacaggtcatcttacgttattcttaacatgtttttcagtcttattaagtaagttttaccagcaaaa 18939548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 24188996 - 24188913
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgt-ttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||| || | ||||||||||||||||||||| |||||| ||||||| |||||||||||  || | ||| |||||||||||    
T  24188996 tgatgacaggtaaacttacattattcttagcatgttttttcactcatttttagtaggttttaaaaggagaatagaggagtatta 24188913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 16521962 - 16522003
Alignment:
Q  242 tagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  16521962 tagcagcaaaatggaggagtattagaacgattgcctatgatt 16522003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 17831790 - 17831750
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  17831790 tgatgacatgtcatcttacgttattcttagcatgtttttca 17831750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 26148279 - 26148339
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||| |||||||||||||||||||||| |||||| | ||| ||| ||||| |||||    
T  26148279 tgatgacaaatcatcttacattattcttagcaagttttttagtcaattttagtagatttta 26148339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 26348537 - 26348457
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||| ||||| |||| |||||||||| |||||||||| |||||| |||||| ||||| || || ||  |||||||||||    
T  26348537 atgacaggtcattttacgttattcttagtatgtttttcagtcatttccagtagattttaccaacagaacagaggagtatta 26348457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 32415830 - 32415870
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  32415830 tgatgacatgtcatcttacattattcttagcatatttttca 32415870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 24263759 - 24263810
Alignment:
Q  192 gtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||| ||||||||||||||||||||| ||  ||| |||||||||||    
T  24263759 gtcatcttacgttattcttagcatgtttttcagtctattttagtaggtttta 24263810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 21353013 - 21352972
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    ||||||||| |||||||||  |||||||||||||||||||||    
T  21353013 ctgatgacaggtcatcttatgttattcttagcatgtttttca 21352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 24513196 - 24513236
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttca 223  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  24513196 tgattacaggtcatcttacgttattcttagcatgtttttca 24513236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 26253569 - 26253529
Alignment:
Q  203 ttattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||||||| |||||||||||||||||||||| | ||||||    
T  26253569 ttattcttaacatgtttttcaatcattttcagcaagtttta 26253529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 20251 - 20352
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||||||||||||||| |||||||||||||||||||||||  | || ||||||   ||||||||||| |||||||||||| || ||||||||||||    
T  20251 ctgatgacaagtcatcttacgttattcttagcatgtttttcaattttatttagtaggaaatagcagcaaaaaggaggagtattagaacgattgcctatga 20350  T
Q  282 tt 283  Q
    ||    
T  20351 tt 20352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 88436 - 88514
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagt 261  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||    
T  88436 tgatgacatgtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccaaaaaaatagaggagt 88514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 4874 - 4954
Alignment:
Q  185 atgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||| ||||||| | |||||||||||    
T  4874 atgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagtagaggagtatta 4954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 13474 - 13556
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| || |||| | ||||| |||||    
T  13474 tgattacaagtcatcttacaatattcttagcatgtttttcaatcaattttagtaggttttaccaacaaagtagaggaatatta 13556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 9112 - 9179
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaa 251  Q
    ||||||||||||||||||| ||||||||||| | ||||||| ||| ||| ||||||| ||| |||||||    
T  9112 tgatgacaagtcatcttacgttattcttagc-tatttttcagtcaattttagtaggtattaccagcaaa 9179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 192219 - 192119
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| |||||||||| ||||| |||||||| |||||| ||||||||| |||||||||||||||||||| |||||| ||| |  |||||| ||||||    
T  192219 tgatgacaggtcatcttacgttatttttagcatggttttcagtcattttcaataggttttagcagcaaaatgaaggagtgttagagcgattgcttatgat 192120  T
Q  283 t 283  Q
    |    
T  192119 t 192119  T

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Target: scaffold0032 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 92828 - 92910
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||||| ||||||| ||||||||||||||||||||| | ||||| |||||| |||||||||||||  ||||| |||||    
T  92828 tgatgacaagttatcttacgttattcttagcatgtttttcagttatttttagtagggtttagcagcaaaaaagaggaatatta 92910  T

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Target: scaffold0555 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 6550 - 6450
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||||| || ||||||| ||||||||||||||||||||| | ||||||| |||| ||||||| |||||  ||||||||||| || ||| | |||||||    
T  6550 tgatgacatgttatcttacgttattcttagcatgtttttcagttattttcaataggatttagcaacaaaaatgaggagtattagaacgatcgtctatgat 6451  T
Q  283 t 283  Q
    |    
T  6450 t 6450  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 283
Target Start/End: Original strand, 182509 - 182611
Alignment:
Q  181 tctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    |||||||||| ||||||||| ||| ||  || ||||||||||| |   ||| |||||| ||||||||||||| |||||||||||| || |||||||||||    
T  182509 tctgatgacatgtcatcttatatttttgataacatgtttttcagtttattttagtaggatttagcagcaaaaaggaggagtattagaacgattgcctatg 182608  T
Q  281 att 283  Q
    |||    
T  182609 att 182611  T

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Target: scaffold0019; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 24900 - 24839
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    ||||| ||| |||||||||  ||||||||||||||||||||| ||||||| | |||||||||    
T  24900 ctgataacatgtcatcttatgttattcttagcatgtttttcagtcattttgaataggtttta 24839  T

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Target: scaffold0019; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 35276 - 35215
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||| |||| || ||||||  ||||||||||||||||||||| ||||||||| |||||||||    
T  35276 ctgaagacatgttatcttatgttattcttagcatgtttttcagtcattttcaataggtttta 35215  T

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Target: scaffold0056 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 23133 - 23036
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatg 280  Q
    |||||||| |||||||||   |||||||||||||| ||||| | ||||| | ||||| |||||| ||||| |||||||||||| || |||||||||||    
T  23133 tgatgacaggtcatcttatgctattcttagcatgtatttcagttattttaattaggtgttagcaccaaaaaggaggagtattagaacgattgcctatg 23036  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 41436 - 41336
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||||  ||||||||  ||||||||||||||||||||| | ||||| ||||||||||| ||||||||  ||||||||||| |   |||||||||||    
T  41436 ctgatgacagctcatcttag-ttattcttagcatgtttttcagttatttttagtaggttttaccagcaaaacagaggagtattagatcaattgcctatga 41338  T
Q  282 tt 283  Q
    ||    
T  41337 tt 41336  T

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Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 6734 - 6685
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  6734 ctgatgacaagtcatcctacattatttttagcatgtttttcattcatttt 6685  T

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Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 21538 - 21437
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatga 281  Q
    |||||||||  |||||||||  ||||||||  |||||||||| | | |||||||||||||||||||||||| ||| ||||| || ||  ||||| |||||    
T  21538 ctgatgacagatcatcttacgatattcttacgatgtttttcagttaatttcagtaggttttagcagcaaaaaggatgagtagtagaacaattgcttatga 21439  T
Q  282 tt 283  Q
    ||    
T  21438 tt 21437  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 95690 - 95621
Alignment:
Q  214 atgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgatt 283  Q
    |||||||||| ||| ||||| | ||||||||||||||||  ||||||||||| || ||||||||||||||    
T  95690 atgtttttcagtcaatttcaatgggttttagcagcaaaaaagaggagtattagaacgattgcctatgatt 95621  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 369261 - 369298
Alignment:
Q  194 catcttacattattcttagcatgtttttcaatcatttt 231  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  369261 catcttacattatttttagcatgtttttcagtcatttt 369298  T

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Target: scaffold0637 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 7483 - 7423
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||| |||| ||||||||||| | ||||||||||||| ||||||| |||||||||||    
T  7483 tgatgacatgtcaacttacattattgtaagcatgtttttcagtcatttttagtaggtttta 7423  T

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Target: scaffold0451 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 5827 - 5727
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattgcctatgat 282  Q
    |||||| | |||||||| | ||||| ||| ||||||||||| | ||||| |||||| ||||| ||||||| |||||||||||| ||  |||| |||||||    
T  5827 tgatgaaaggtcatctttcgttatttttaacatgtttttcagttatttttagtaggatttagaagcaaaaaggaggagtattagaacaattgtctatgat 5728  T
Q  283 t 283  Q
    |    
T  5727 t 5727  T

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Target: scaffold0451; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 10103 - 10175
Alignment:
Q  193 tcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    |||||||||  |||| |||||||| |||||| |||||||||||||||||||  |||||||  |||||||||||    
T  10103 tcatcttacgctattattagcatgcttttcagtcattttcagtaggttttactagcaaaacagaggagtatta 10175  T

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Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 36143 - 36199
Alignment:
Q  195 atcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaa 251  Q
    ||||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  36143 atcttacgttattcttatcatgtttttcagtcattttcaataggttttatcagcaaa 36199  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 243831 - 243912
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 265  Q
    ||||||||  ||||||||| ||||||||||||| ||||| | ||||||| |||||||||||  |||||||  |||||||||||    
T  243831 tgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtatta 243912  T

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Target: scaffold0094 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 12328 - 12267
Alignment:
Q  182 ctgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttta 243  Q
    |||||||||  ||||||  | ||||||||||||||||||||||||| ||| |||||||||||    
T  12328 ctgatgacatttcatctagcgttattcttagcatgtttttcaatcaattttagtaggtttta 12267  T

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Target: scaffold0072 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 38388 - 38329
Alignment:
Q  183 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggtttt 242  Q
    |||||||| |||| |||||  |||||||||||||||| ||| | ||||||||||||||||    
T  38388 tgatgacaggtcaccttacgctattcttagcatgtttgtcagttattttcagtaggtttt 38329  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 1454 - 1499
Alignment:
Q  186 tgacaagtcatcttacattattcttagcatgtttttcaatcatttt 231  Q
    |||||||| | ||||||||||| ||||||| |||||||||||||||    
T  1454 tgacaagttaccttacattatttttagcatatttttcaatcatttt 1499  T

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