View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21205_low_42 (Length: 284)
Name: NF21205_low_42
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21205_low_42 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 11 - 270
Target Start/End: Complemental strand, 11176032 - 11175773
Alignment:
| Q |
11 |
cacagacacgagtacactagttctctaggcagggattgatttggtttaggatgacgtaaatgtgttgtagtgttttgtacactttatgttgttgacggtt |
110 |
Q |
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| T |
11176032 |
cacacacacgagtacactagttctctaggcagggattgatttggtttaggatgacgtaaatgtgttgtagtgttttgtacactttatgttgttgacggtt |
11175933 |
T |
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| Q |
111 |
ggtccacattttttccttggtttggactttggtccattaattagtttattttatatgcatgtggtgatgctgctaaaatgatatgatgtgaccaccatca |
210 |
Q |
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| T |
11175932 |
ggtccacattttttccttggtttggactttggtccattaattagtttattttatatgcatgtggtgatgctgctaaaatgatatgatgtgaccaccatca |
11175833 |
T |
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| Q |
211 |
tcatcaaacaatcaaagttggttcttattctttcttgagttaggatttgtggaaccaact |
270 |
Q |
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| T |
11175832 |
tcatcaaacaatcaaagttggttcttattctttcttgagttaggatttgtggaaccaact |
11175773 |
T |
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