View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21205_low_44 (Length: 281)
Name: NF21205_low_44
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21205_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 33 - 266
Target Start/End: Complemental strand, 34863482 - 34863249
Alignment:
| Q |
33 |
gaaatatcattaagaattgaaatagagaacaaacatctcgaggaactagaccaaaatccacggaaggaacaaatacaagcaataattgcctaattttcag |
132 |
Q |
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| T |
34863482 |
gaaatatcattaagagttgaaatagagaacaaacatcttgaggaactaaaccaaaatccacggaaggaacaaatacaagcaataattgcctaattttcag |
34863383 |
T |
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| Q |
133 |
cttaactactcgcgacaatgacaatgaccattaatacatctcgaatcggaagtacgaatacaatcaattaatgggcagtcatagtcaaattcgcaaggaa |
232 |
Q |
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| T |
34863382 |
cttaactactcgcgacaatgacaattaccattaatacatctcgaatcggaagtacgaatacaatcaattaatgggcagtcatagtcaaattcgcaaggaa |
34863283 |
T |
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| Q |
233 |
taagaggcccaggcggctctgtctctgtaatgtt |
266 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
34863282 |
taagaggcccaggcggctctgtctctgtaatgtt |
34863249 |
T |
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