View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21205_low_46 (Length: 271)

Name: NF21205_low_46
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21205_low_46
NF21205_low_46
[»] chr3 (6 HSPs)
chr3 (1-260)||(45056342-45056601)
chr3 (129-222)||(9281259-9281352)
chr3 (141-215)||(40415101-40415175)
chr3 (169-222)||(4016635-4016688)
chr3 (171-222)||(5852497-5852548)
chr3 (130-215)||(34680359-34680444)
[»] chr2 (7 HSPs)
chr2 (131-218)||(33740735-33740822)
chr2 (129-222)||(45001684-45001777)
chr2 (128-216)||(14802770-14802858)
chr2 (142-214)||(24853425-24853497)
chr2 (159-222)||(13398828-13398891)
chr2 (138-223)||(19192827-19192912)
chr2 (176-222)||(25765799-25765845)
[»] chr6 (2 HSPs)
chr6 (129-222)||(26210917-26211010)
chr6 (140-216)||(26240931-26241007)
[»] chr8 (7 HSPs)
chr8 (137-214)||(27562897-27562974)
chr8 (171-222)||(23849785-23849836)
chr8 (137-222)||(8496692-8496777)
chr8 (160-216)||(1226679-1226736)
chr8 (131-216)||(14583721-14583806)
chr8 (130-223)||(27302031-27302124)
chr8 (129-165)||(44123671-44123707)
[»] chr5 (4 HSPs)
chr5 (159-221)||(34278597-34278659)
chr5 (145-216)||(27674509-27674580)
chr5 (173-223)||(39035729-39035779)
chr5 (166-206)||(26440492-26440532)
[»] chr4 (4 HSPs)
chr4 (154-216)||(20651586-20651648)
chr4 (147-222)||(42862111-42862186)
chr4 (129-165)||(50033018-50033054)
chr4 (129-165)||(50035537-50035573)
[»] chr1 (4 HSPs)
chr1 (171-212)||(48112953-48112994)
chr1 (169-216)||(507524-507571)
chr1 (125-222)||(13971557-13971654)
chr1 (169-222)||(8980844-8980897)
[»] chr7 (5 HSPs)
chr7 (131-222)||(14543587-14543678)
chr7 (177-223)||(9173185-9173231)
chr7 (173-223)||(41007802-41007852)
chr7 (182-222)||(23817126-23817166)
chr7 (130-190)||(29492204-29492264)
[»] scaffold0500 (1 HSPs)
scaffold0500 (139-218)||(488-567)
[»] scaffold1248 (1 HSPs)
scaffold1248 (137-222)||(1265-1350)
[»] scaffold0952 (1 HSPs)
scaffold0952 (137-222)||(963-1048)


Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 45056342 - 45056601
Alignment:
Q  1 tttctgttccttctgcggttgagtgtatcatcatactgtttcagatttcaagattctttaaaccaccttgagctgcgcgccaagccacgacaaattgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45056342 tttctgttccttctgcggttgagtgtatcatcatactgtttcagatttcaagattctttaaaccaccttgagctgcgcgccaagccacgacaaattgtgt 45056441  T
Q  101 agtaatattgcacaagaatttgataaaaaatactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaactt 200  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  45056442 agtaatattggacaagaatttgataaaaaatactctctccgtcacatattatatgatttagttgattctgtcacgtatgtcaatgcataattttaaattt 45056541  T
Q  201 aaatatctttaataatgtattatgtgatttagttgactttgtcctacatgttgttttcat 260  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  45056542 aaatatctttaataatgtattatatgatttagttgactttatcctacatgttgttttcat 45056601  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 9281259 - 9281352
Alignment:
Q  129 aatactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||| ||||||||||| ||| ||||  ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  9281259 aatactccctccgtcccatgttatatgacctagttgattttgtcacgtatgtcaatgcataattttgaacttaaatatctttaataatctatta 9281352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 40415175 - 40415101
Alignment:
Q  141 gtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataa 215  Q
    ||||||||||| ||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  40415175 gtcccatattatatgatctagttgactctgtcacgtacgtcaatgcataattttaaacttaaatatctttaataa 40415101  T

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Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 4016688 - 4016635
Alignment:
Q  169 tgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||| |||||    
T  4016688 tgtcacgtatgccaatgaacaattttaaacttaaatatctttaataatctatta 4016635  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 5852497 - 5852548
Alignment:
Q  171 tcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  5852497 tcacgtatgtcaatttataattttgatcttaaatatctttaataatctatta 5852548  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 34680444 - 34680359
Alignment:
Q  130 atactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataa 215  Q
    |||||| ||||||||| || |||||||   |||||| ||| | ||||||  |||||||||||||| | |||||||||||| |||||    
T  34680444 atactccctccgtcccttaatacatgacacagttgactctattacgtattccaatgtataattttgagcttaaatatcttgaataa 34680359  T

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Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 33740822 - 33740735
Alignment:
Q  131 tactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgt 218  Q
    ||||| |||||||||||||||  |||  ||||||| ||||||||||||| ||||  | ||||||||||||||||||||||||||||||    
T  33740822 tactccctccgtcccatattatgtgacctagttgactctgtcacgtatgccaatacacaattttaaacttaaatatctttaataatgt 33740735  T

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Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 45001684 - 45001777
Alignment:
Q  129 aatactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||| || ||||||||||||||||||  ||| || |||||||||| |||||||| | |||||| ||||||||||| ||||||||| |||||    
T  45001684 aatactcccttcgtcccatattacatgatacagtggactctgtcacgtttgtcaatgcacaattttgaacttaaatatatttaataatttatta 45001777  T

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Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 14802770 - 14802858
Alignment:
Q  128 aaatactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataat 216  Q
    ||||||||| ||||||| |||||| ||||  ||||||| ||||||| ||||||||||| | |  ||| |||||||||||||||||||||    
T  14802770 aaatactctttccgtcctatattatatgacctagttgactctgtcaagtatgtcaatgcacatatttgaacttaaatatctttaataat 14802858  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 24853497 - 24853425
Alignment:
Q  142 tcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaata 214  Q
    |||||||||| ||||  ||||||| | ||||||||||| ||||| |||||||| |||||||||||||||||||    
T  24853497 tcccatattatatgacctagttgactatgtcacgtatgccaatgcataattttgaacttaaatatctttaata 24853425  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 13398828 - 13398891
Alignment:
Q  159 tagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||||| ||||| ||||| ||||| | |||||||||| ||||||||||||||||| |||||    
T  13398828 tagttgattttgtcatgtatgccaatgaacaattttaaacataaatatctttaataatttatta 13398891  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 19192912 - 19192827
Alignment:
Q  138 tccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtattat 223  Q
    ||||||||||||||  |||| || |||| |||||||| ||| |||||||||| |||| | ||| |||||||||||| || ||||||    
T  19192912 tccgtcccatattaagtgatatacttgactctgtcacatatatcaatgtatattttttatctttaatatctttaattatctattat 19192827  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 25765845 - 25765799
Alignment:
Q  176 tatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    |||||||||||| ||||||||| |||||||| ||||||||| |||||    
T  25765845 tatgtcaatgtacaattttaaatttaaatatttttaataatttatta 25765799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 26211010 - 26210917
Alignment:
Q  129 aatactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||| |||| ||||||||||  ||| |||||||| |||||||| |||| ||||  |||||||| ||||||||||||||||||||| |||||    
T  26211010 aatactccctccatcccatattatgtgacttagttgactctgtcacatatgccaatacataattttgaacttaaatatctttaataatatatta 26210917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 26241007 - 26240931
Alignment:
Q  140 cgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataat 216  Q
    |||||||| ||| ||||  | ||||| ||||| |||||| |||||| | |||||||||| |||||||||||||||||    
T  26241007 cgtcccattttaaatgaaatggttgactctgttacgtatatcaatgcacaattttaaacataaatatctttaataat 26240931  T

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Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 27562897 - 27562974
Alignment:
Q  137 ctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaata 214  Q
    ||||||||||| |||  |||||||||||| ||| |||||||||| |||| | |||||| |||||||||||||||||||    
T  27562897 ctccgtcccattttatgtgatttagttgactctatcacgtatgtaaatgcacaattttgaacttaaatatctttaata 27562974  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 23849836 - 23849785
Alignment:
Q  171 tcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||| |||||    
T  23849836 tcacgtatgtcaatgcataatattgaacttaaatatctttaataatttatta 23849785  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 8496692 - 8496777
Alignment:
Q  137 ctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    |||||||||||| ||||||||  ||||||  || | |||||| |||||| |||||||| | |||||||||||| |||||| |||||    
T  8496692 ctccgtcccataatacatgatacagttgaccctattacgtatatcaatgcataattttgagcttaaatatcttgaataatatatta 8496777  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 1226736 - 1226679
Alignment:
Q  160 agttgattctgtcacgtatgtcaa-tgtataattttaaacttaaatatctttaataat 216  Q
    |||||||||||||||| ||||||| |  | |||||| |||||||||||||||||||||    
T  1226736 agttgattctgtcacggatgtcaaatacacaattttgaacttaaatatctttaataat 1226679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 14583721 - 14583806
Alignment:
Q  131 tactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataat 216  Q
    ||||| ||||||||| || |||||||  ||||||| ||| | ||| ||  ||||| |||||||| | |||||||||||||||||||    
T  14583721 tactccctccgtcccttaatacatgacatagttgactctattacgcattccaatgcataattttgagcttaaatatctttaataat 14583806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 27302124 - 27302031
Alignment:
Q  130 atactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtattat 223  Q
    |||||| |||||||||||| ||||||||  | ||||  || | ||| ||||||||| |||||||| |  ||||||||||| |||||| ||||||    
T  27302124 atactccctccgtcccataatacatgatacaattgaccctattacgcatgtcaatgcataattttgagtttaaatatcttgaataatatattat 27302031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 44123671 - 44123707
Alignment:
Q  129 aatactctctccgtcccatattacatgatttagttga 165  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  44123671 aatactctctccgtcccatattagatgatctagttga 44123707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 34278597 - 34278659
Alignment:
Q  159 tagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatt 221  Q
    ||||||| ||||||  ||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  34278597 tagttgactctgtcgtgtatgtcaatgtacaattttaaacttaaatatatttaataatctatt 34278659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 27674509 - 27674580
Alignment:
Q  145 catattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataat 216  Q
    |||||||  |||| |||||||  |||| |||||||| |||||||||||||||||| |||||| |||||||||    
T  27674509 catattatgtgatatagttgaccctgttacgtatgtaaatgtataattttaaactaaaatatttttaataat 27674580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 39035779 - 39035729
Alignment:
Q  173 acgtatgtcaatgtataattttaaacttaaatatctttaataatgtattat 223  Q
    ||||||||||||| |||||||| | |||||||||||| |||||| ||||||    
T  39035779 acgtatgtcaatgaataattttgagcttaaatatcttgaataatatattat 39035729  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 26440492 - 26440532
Alignment:
Q  166 ttctgtcacgtatgtcaatgtataattttaaacttaaatat 206  Q
    |||||||||||||||||||||| || ||| |||||||||||    
T  26440492 ttctgtcacgtatgtcaatgtacaactttgaacttaaatat 26440532  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 20651648 - 20651586
Alignment:
Q  154 tgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataat 216  Q
    |||| ||||||| ||||||||||||||||||| | |||||| ||||||||||| |||||||||    
T  20651648 tgatctagttgactctgtcacgtatgtcaatgcacaattttgaacttaaatatttttaataat 20651586  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 42862111 - 42862186
Alignment:
Q  147 tattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    |||||| |||| ||||||| | | |||| ||| | |||| ||||||||||| |||||||||||||||||| |||||    
T  42862111 tattacgtgatctagttgactatatcacatatattaatggataattttaaatttaaatatctttaataatatatta 42862186  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 50033018 - 50033054
Alignment:
Q  129 aatactctctccgtcccatattacatgatttagttga 165  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  50033018 aatactctctccgtcccatattagatgacttagttga 50033054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 50035537 - 50035573
Alignment:
Q  129 aatactctctccgtcccatattacatgatttagttga 165  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  50035537 aatactctctccgtcccatattagatgatctagttga 50035573  T

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Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 48112953 - 48112994
Alignment:
Q  171 tcacgtatgtcaatgtataattttaaacttaaatatctttaa 212  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  48112953 tcacatatgtcaatgtataattttaaacttaaatatctttaa 48112994  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 507571 - 507524
Alignment:
Q  169 tgtcacgtatgtcaatgtataattttaaacttaaatatctttaataat 216  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||    
T  507571 tgtcacgtatgtcaatgtacaattttgatcttaaatatctttaataat 507524  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 13971557 - 13971654
Alignment:
Q  125 aaaaaatactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||||||| |||||||| ||||||  |||  || ||||   ||||||||||| ||||| | ||||| ||| |||||||||||||||||| |||||    
T  13971557 aaaaaatactccctccgtcctatattatgtgacctaattgaccatgtcacgtatgccaatgcacaatttcaaatttaaatatctttaataatctatta 13971654  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 8980897 - 8980844
Alignment:
Q  169 tgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||||||||||||  | |||||| ||||||||||| ||||||||| |||||    
T  8980897 tgtcacgtatgtcaatccacaattttgaacttaaatatttttaataatctatta 8980844  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 14543587 - 14543678
Alignment:
Q  131 tactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    ||||||||||||||||||||| |||| ||||||||  |||||| |||||  |||  | |||||| |  |||||||||||||||||| |||||    
T  14543587 tactctctccgtcccatattatatgacttagttgacactgtcatgtatggtaatacacaattttgagtttaaatatctttaataatctatta 14543678  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 9173185 - 9173231
Alignment:
Q  177 atgtcaatgtataattttaaacttaaatatctttaataatgtattat 223  Q
    ||||||||| |||||||| |||||||||||||| |||||| ||||||    
T  9173185 atgtcaatgcataattttgaacttaaatatcttgaataatatattat 9173231  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 41007802 - 41007852
Alignment:
Q  173 acgtatgtcaatgtataattttaaacttaaatatctttaataatgtattat 223  Q
    |||||||||||||||||||||| |  ||||||||||| |||||| ||||||    
T  41007802 acgtatgtcaatgtataattttgagtttaaatatcttgaataatatattat 41007852  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 23817166 - 23817126
Alignment:
Q  182 aatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    |||| |||||||||| ||||||||||||||||||| |||||    
T  23817166 aatgcataattttaatcttaaatatctttaataatatatta 23817126  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 29492204 - 29492264
Alignment:
Q  130 atactctctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataa 190  Q
    |||||| ||||||||||||||| || |   |||||||| ||||||||||||||||| ||||    
T  29492204 atactccctccgtcccatattatatcaaccagttgattttgtcacgtatgtcaatgcataa 29492264  T

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Target: scaffold0500 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 488 - 567
Alignment:
Q  139 ccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgt 218  Q
    |||||||||| |||||||   ||||||  || | ||||||||||||| |||||||| | |||||||||||| ||||||||    
T  488 ccgtcccataatacatgacacagttgaccctattacgtatgtcaatgcataattttgagcttaaatatcttgaataatgt 567  T

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Target: scaffold1248 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 1265 - 1350
Alignment:
Q  137 ctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    |||||| ||||| |||||||  ||||||||||| | | | || |||||| |||||||||| |||||||||| | |||||| |||||    
T  1265 ctccgttccataatacatgacatagttgattctattatgcatatcaatgcataattttaagcttaaatatcctgaataatatatta 1350  T

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Target: scaffold0952 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 1048 - 963
Alignment:
Q  137 ctccgtcccatattacatgatttagttgattctgtcacgtatgtcaatgtataattttaaacttaaatatctttaataatgtatta 222  Q
    |||||| ||||| |||||||  ||||||||||| | | | || |||||| |||||||||| |||||||||| | |||||| |||||    
T  1048 ctccgttccataatacatgacatagttgattctattatgcatatcaatgcataattttaagcttaaatatcctgaataatatatta 963  T

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