View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21205_low_70 (Length: 243)
Name: NF21205_low_70
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21205_low_70 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 9526673 - 9526913
Alignment:
| Q |
1 |
tatttatttaagatgccgatctctcccaacatttttggttctttataaacctaagtatcgaacatttgaccacatacttaaaagattaaatgtcaataac |
100 |
Q |
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| T |
9526673 |
tatttatttaagatgccgatctctcccaacatttttggttctttataaacttaagtatcgaacatttgactacatacttaaaagattaaatgtcaataat |
9526772 |
T |
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| Q |
101 |
atgtcattggtaaatgatcaaatgttatcggtatactttttatatttgtacttctatgaggtatctaaacacagactaatcttcttatgagaatttgttg |
200 |
Q |
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| T |
9526773 |
atgtcattggtaaatgatcaaatgttatcggtatactttttatatttgtacttctatgaggtatctaaacacagactaatctccttatgagaatttgttg |
9526872 |
T |
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| Q |
201 |
tgcatataaggtgtattctctctctttttaacctaatttcttc |
243 |
Q |
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|||||||||||||||| ||| ||||||||||||||||||||| |
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| T |
9526873 |
tgcatataaggtgtat--tctttctttttaacctaatttcttc |
9526913 |
T |
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