View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21205_low_71 (Length: 243)

Name: NF21205_low_71
Description: NF21205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21205_low_71
NF21205_low_71
[»] chr6 (22 HSPs)
chr6 (139-229)||(34142842-34142932)
chr6 (139-229)||(34155458-34155548)
chr6 (139-229)||(2817397-2817487)
chr6 (14-97)||(34142776-34142860)
chr6 (14-97)||(34155392-34155476)
chr6 (137-229)||(34376525-34376617)
chr6 (138-229)||(6727772-6727863)
chr6 (139-229)||(24190650-24190740)
chr6 (14-97)||(2817469-2817553)
chr6 (14-97)||(24190722-24190807)
chr6 (14-97)||(6727845-6727929)
chr6 (139-227)||(31983538-31983626)
chr6 (14-97)||(34376459-34376543)
chr6 (14-98)||(31983469-31983554)
chr6 (14-92)||(21402107-21402186)
chr6 (14-92)||(22697840-22697919)
chr6 (14-92)||(22703016-22703095)
chr6 (14-92)||(29490880-29490959)
chr6 (138-229)||(22697767-22697858)
chr6 (139-229)||(22702944-22703034)
chr6 (139-229)||(21402168-21402258)
chr6 (139-229)||(29490808-29490898)
[»] chr1 (24 HSPs)
chr1 (14-111)||(5725346-5725444)
chr1 (139-229)||(48245968-48246058)
chr1 (14-97)||(5730766-5730850)
chr1 (14-97)||(3585296-3585380)
chr1 (14-97)||(48246040-48246124)
chr1 (138-229)||(3585362-3585453)
chr1 (14-92)||(27711689-27711768)
chr1 (14-92)||(34317882-34317961)
chr1 (14-92)||(36684312-36684391)
chr1 (14-92)||(37404068-37404147)
chr1 (139-229)||(5725426-5725516)
chr1 (14-91)||(37409187-37409265)
chr1 (14-92)||(11250773-11250852)
chr1 (15-92)||(27716809-27716887)
chr1 (138-229)||(34317810-34317900)
chr1 (139-229)||(36684241-36684330)
chr1 (139-229)||(27711750-27711840)
chr1 (134-229)||(11250695-11250791)
chr1 (139-229)||(5730832-5730922)
chr1 (139-229)||(37403995-37404086)
chr1 (139-229)||(37409114-37409205)
chr1 (139-228)||(50958978-50959069)
chr1 (139-229)||(27716870-27716962)
chr1 (109-141)||(51406668-51406700)
[»] chr7 (33 HSPs)
chr7 (137-229)||(42572661-42572753)
chr7 (139-229)||(12935145-12935235)
chr7 (139-229)||(19308872-19308962)
chr7 (14-97)||(17496095-17496179)
chr7 (14-97)||(17557035-17557119)
chr7 (14-97)||(42572595-42572679)
chr7 (139-229)||(17496161-17496251)
chr7 (139-229)||(17556963-17557053)
chr7 (139-229)||(32211961-32212051)
chr7 (139-229)||(43893603-43893693)
chr7 (139-229)||(47176492-47176582)
chr7 (14-97)||(2234020-2234104)
chr7 (14-97)||(12935079-12935163)
chr7 (14-97)||(19308944-19309028)
chr7 (14-97)||(47176564-47176648)
chr7 (14-97)||(21080389-21080473)
chr7 (14-97)||(32212033-32212117)
chr7 (14-97)||(43893537-43893621)
chr7 (14-92)||(33238421-33238500)
chr7 (14-92)||(33243598-33243677)
chr7 (14-92)||(47994219-47994298)
chr7 (139-229)||(2233948-2234038)
chr7 (139-229)||(21080317-21080407)
chr7 (14-97)||(16538741-16538825)
chr7 (14-97)||(16626837-16626921)
chr7 (149-229)||(16538678-16538759)
chr7 (149-229)||(16626903-16626984)
chr7 (18-92)||(47999394-47999469)
chr7 (139-229)||(33238482-33238572)
chr7 (139-229)||(47994280-47994369)
chr7 (139-229)||(33243659-33243749)
chr7 (139-229)||(47999455-47999544)
chr7 (139-221)||(47544745-47544827)
[»] scaffold0594 (2 HSPs)
scaffold0594 (138-229)||(8529-8620)
scaffold0594 (14-97)||(8602-8686)
[»] chr4 (42 HSPs)
chr4 (139-229)||(9763269-9763359)
chr4 (14-97)||(51018774-51018858)
chr4 (139-229)||(13695818-13695908)
chr4 (139-229)||(13711431-13711521)
chr4 (14-97)||(4207037-4207121)
chr4 (14-97)||(13695752-13695836)
chr4 (14-97)||(13711365-13711449)
chr4 (139-221)||(41393927-41394009)
chr4 (139-229)||(51018702-51018792)
chr4 (14-97)||(41393853-41393937)
chr4 (139-229)||(4207103-4207192)
chr4 (14-97)||(9763341-9763425)
chr4 (14-97)||(53798324-53798408)
chr4 (14-92)||(8985055-8985134)
chr4 (14-92)||(13700876-13700955)
chr4 (14-92)||(21299483-21299562)
chr4 (14-92)||(21304603-21304682)
chr4 (14-92)||(36354561-36354640)
chr4 (14-92)||(36359747-36359826)
chr4 (25-97)||(47045699-47045772)
chr4 (14-92)||(8979935-8980014)
chr4 (18-92)||(39999488-39999563)
chr4 (18-92)||(40004446-40004521)
chr4 (18-92)||(54343622-54343697)
chr4 (18-92)||(54348776-54348851)
chr4 (14-92)||(54990460-54990539)
chr4 (14-92)||(54991842-54991921)
chr4 (139-229)||(53798390-53798480)
chr4 (139-229)||(8979863-8979953)
chr4 (139-229)||(8984983-8985073)
chr4 (139-229)||(13700937-13701027)
chr4 (139-229)||(21299411-21299501)
chr4 (139-229)||(21304531-21304621)
chr4 (139-229)||(47045616-47045706)
chr4 (139-229)||(54991903-54991993)
chr4 (139-229)||(36354622-36354710)
chr4 (139-229)||(54990388-54990478)
chr4 (137-229)||(40004507-40004598)
chr4 (139-229)||(39999549-39999638)
chr4 (139-229)||(54343683-54343772)
chr4 (139-229)||(54348837-54348926)
chr4 (139-229)||(36359808-36359896)
[»] chr3 (28 HSPs)
chr3 (139-229)||(30341200-30341290)
chr3 (14-97)||(3476260-3476344)
chr3 (14-97)||(3481717-3481801)
chr3 (139-227)||(30338096-30338184)
chr3 (14-97)||(34128479-34128563)
chr3 (138-229)||(54271373-54271464)
chr3 (139-229)||(3476188-3476278)
chr3 (14-97)||(4117018-4117102)
chr3 (14-97)||(30338168-30338252)
chr3 (14-97)||(54271307-54271391)
chr3 (139-229)||(4116946-4117036)
chr3 (14-97)||(17358561-17358644)
chr3 (14-97)||(30341272-30341356)
chr3 (14-92)||(17369085-17369164)
chr3 (18-92)||(15762631-15762706)
chr3 (18-92)||(15767792-15767867)
chr3 (19-92)||(20090264-20090338)
chr3 (19-92)||(20095389-20095463)
chr3 (21-92)||(55129156-55129228)
chr3 (139-229)||(34128405-34128497)
chr3 (139-229)||(3481645-3481735)
chr3 (139-229)||(17369146-17369236)
chr3 (139-227)||(17358628-17358716)
chr3 (137-229)||(15762554-15762645)
chr3 (139-229)||(15767717-15767806)
chr3 (139-229)||(20090187-20090277)
chr3 (139-229)||(20095312-20095402)
chr3 (138-217)||(55129228-55129309)
[»] chr8 (18 HSPs)
chr8 (14-97)||(24885319-24885403)
chr8 (139-227)||(42513844-42513932)
chr8 (148-229)||(24885385-24885466)
chr8 (14-97)||(43998614-43998698)
chr8 (14-97)||(17955202-17955286)
chr8 (14-97)||(42513916-42514000)
chr8 (14-92)||(32016119-32016198)
chr8 (138-225)||(21641122-21641209)
chr8 (16-97)||(21641197-21641278)
chr8 (14-92)||(2165463-2165542)
chr8 (14-92)||(32010945-32011024)
chr8 (139-229)||(17955130-17955220)
chr8 (139-229)||(32011006-32011095)
chr8 (139-229)||(32016180-32016269)
chr8 (139-229)||(43998542-43998632)
chr8 (139-229)||(2165390-2165481)
chr8 (148-185)||(24886394-24886431)
chr8 (139-167)||(21648779-21648807)
[»] chr2 (20 HSPs)
chr2 (141-229)||(28751019-28751107)
chr2 (14-97)||(4162963-4163047)
chr2 (14-97)||(28751089-28751173)
chr2 (14-92)||(42723048-42723127)
chr2 (14-92)||(42728217-42728296)
chr2 (18-92)||(40392685-40392760)
chr2 (18-92)||(44096721-44096796)
chr2 (18-92)||(44754207-44754282)
chr2 (139-229)||(4162891-4162981)
chr2 (14-92)||(40518117-40518197)
chr2 (14-92)||(40520003-40520083)
chr2 (18-92)||(44759373-44759448)
chr2 (139-229)||(42728146-42728235)
chr2 (139-229)||(42722977-42723066)
chr2 (139-229)||(40392746-40392836)
chr2 (139-229)||(40520065-40520158)
chr2 (139-229)||(44096782-44096871)
chr2 (139-229)||(44754132-44754221)
chr2 (139-229)||(40518043-40518135)
chr2 (139-227)||(44759298-44759385)
[»] scaffold0166 (4 HSPs)
scaffold0166 (139-229)||(12982-13072)
scaffold0166 (14-97)||(13054-13138)
scaffold0166 (139-229)||(18439-18529)
scaffold0166 (14-97)||(18511-18595)
[»] chr5 (26 HSPs)
chr5 (139-229)||(24770601-24770691)
chr5 (139-229)||(36254578-36254668)
chr5 (14-97)||(24770673-24770757)
chr5 (14-97)||(36254512-36254596)
chr5 (139-229)||(24776055-24776145)
chr5 (14-97)||(1413141-1413225)
chr5 (14-97)||(24776127-24776211)
chr5 (14-92)||(17510424-17510503)
chr5 (139-229)||(1413068-1413159)
chr5 (14-92)||(43580026-43580105)
chr5 (14-92)||(17505319-17505398)
chr5 (14-97)||(26709683-26709767)
chr5 (14-97)||(26979417-26979501)
chr5 (14-81)||(41853846-41853914)
chr5 (138-229)||(17510485-17510576)
chr5 (14-92)||(42019939-42020018)
chr5 (18-92)||(42024719-42024794)
chr5 (139-229)||(42020000-42020090)
chr5 (14-82)||(41858960-41859029)
chr5 (139-229)||(43580087-43580179)
chr5 (139-221)||(41859019-41859102)
chr5 (139-229)||(26709749-26709839)
chr5 (139-229)||(26979483-26979573)
chr5 (139-229)||(42024780-42024870)
chr5 (139-229)||(41853896-41853988)
chr5 (139-221)||(17505388-17505472)
[»] scaffold0517 (2 HSPs)
scaffold0517 (14-92)||(3929-4008)
scaffold0517 (139-229)||(3990-4081)
[»] scaffold0014 (4 HSPs)
scaffold0014 (14-92)||(31964-32043)
scaffold0014 (18-92)||(26792-26867)
scaffold0014 (137-229)||(32025-32116)
scaffold0014 (139-229)||(26853-26942)
[»] scaffold0055 (2 HSPs)
scaffold0055 (14-92)||(3443-3522)
scaffold0055 (139-229)||(3504-3593)
[»] scaffold0052 (2 HSPs)
scaffold0052 (14-92)||(81013-81092)
scaffold0052 (139-229)||(80942-81031)
[»] scaffold0060 (2 HSPs)
scaffold0060 (35-97)||(37649-37712)
scaffold0060 (137-196)||(37716-37775)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 34142932 - 34142842
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  34142932 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaact 34142842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 34155548 - 34155458
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  34155548 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaact 34155458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 2817397 - 2817487
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  2817397 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaact 2817487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 34142860 - 34142776
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34142860 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 34142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 34155476 - 34155392
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34155476 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 34155392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 34376617 - 34376525
Alignment:
Q  137 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  34376617 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 34376525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 6727772 - 6727863
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  6727772 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 6727863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 24190650 - 24190740
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  24190650 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 24190740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 2817469 - 2817553
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2817469 acacaaggatggagaaactagtgtaaagtgtgaattgaaaatttaatgtcccacattgggtagatcacacactctagtagtgttt 2817553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 24190722 - 24190807
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt--atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  24190722 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaatttttatgtcccacattgggtagatcacacactctagtagtgttt 24190807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 6727845 - 6727929
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  6727845 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgttccacattgggtagatcacacactctagtagtgttt 6727929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 31983626 - 31983538
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| | ||||||||||||||||| ||||||||||    
T  31983626 tgttggaacactagtgtatattggcaaaaacttggagtatactagtttttatgaggagacattggaatgtaaacacaatgatgtagaaa 31983538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 34376543 - 34376459
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  34376543 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagataacacactctagtagtgttt 34376459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 31983554 - 31983469
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgtttg 98  Q
    |||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  31983554 acacaatgatgtagaaattagtgtaaagtgtgaattgaaaattttatgtcccgcattgggtagatcacacactctagtagtgtttg 31983469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 21402186 - 21402107
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  21402186 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 21402107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 22697840 - 22697919
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  22697840 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 22697919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 22703016 - 22703095
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  22703016 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 22703095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 29490880 - 29490959
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  29490880 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 29490959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 22697767 - 22697858
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  22697767 ctgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 22697858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 22702944 - 22703034
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  22702944 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 22703034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 21402258 - 21402168
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||| ||||   | || |||| |||||||||||||||||||||||| |||||||    
T  21402258 tgttggaacactagtgtataatgaaaaaaacttggagtatagtagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 21402168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 29490808 - 29490898
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || ||||  ||||||||||||||||||||||| |||||||    
T  29490808 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcttttggaatgtaaacacaaggatggagaaact 29490898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 5725444 - 5725346
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgtttggcaaaaattatat 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5725444 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgtttgccaaaaattatat 5725346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 48245968 - 48246058
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  48245968 tgttggaacaatagtgtacattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaact 48246058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 5730850 - 5730766
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5730850 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 5730766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 3585380 - 3585296
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3585380 acacaaggatggagaaactagtgtaaaatgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 3585296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 48246040 - 48246124
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  48246040 acacaaggatgtagaaactagtgtaaagtgtgaattaaaatttttatgtcccacattgggtagatcacacactctagtagtgttt 48246124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 3585453 - 3585362
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||| |||||||||||||||||||||||| |||||||    
T  3585453 ctgttggaacactagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaact 3585362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 27711768 - 27711689
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  27711768 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 27711689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 34317882 - 34317961
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  34317882 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 34317961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 36684312 - 36684391
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  36684312 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 36684391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 37404068 - 37404147
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  37404068 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 37404147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 5725516 - 5725426
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| | || |||| |||||||||||||||||||||||| |||||||    
T  5725516 tgttggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaact 5725426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 37409187 - 37409265
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagta 91  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  37409187 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagta 37409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 11250773 - 11250852
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  11250773 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggttagatcacacactctagtag 11250852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 27716887 - 27716809
Alignment:
Q  15 cacaaggatgtagaaactagtgtaaagtgtgaattgaaa-atttatgtcccacattgggtagatcacacactctagtag 92  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  27716887 cacaaggatggagaaactagtgtaaagtgtgaattgaaatttttatgtcccacatcgggtagatcacacactctagtag 27716809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 34317810 - 34317900
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  34317810 ctgttggaacactagtgtatattgg-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 34317900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 36684241 - 36684330
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  36684241 tgttggaacactagtgtatattgg-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 36684330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 27711840 - 27711750
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  27711840 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 27711750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 11250695 - 11250791
Alignment:
Q  134 ttatctgttggaacactagtgtatattggcaaaaa-cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||| ||||||||||||||||||| ||| ||||| |||||||||||| |||   | || ||||||||||||||||||||||||||||| |||||||    
T  11250695 ttatcggttggaacactagtgtataatggaaaaaaacttggagtataccagtgagtttgtggagtctttggaatgtaaacacaaggatggagaaact 11250791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 5730922 - 5730832
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||| ||||||||||||||| ||| ||||| ||||||||||||||||| | || | |  |||||||||||||||||||||||| |||||||    
T  5730922 tgttagaacactagtgtataatggaaaaaatttggagtatactagttggtttgtgaaacctttggaatgtaaacacaaggatggagaaact 5730832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 37403995 - 37404086
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaa-cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  37403995 tgttggaacactagtgtataatgaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 37404086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 37409114 - 37409205
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaa-cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  37409114 tgttggaacactagtgtataatgaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 37409205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 50958978 - 50959069
Alignment:
Q  139 tgttggaacactagtgtatattggc--aaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaac 228  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||   | || |||| |||||||||||||||||||| ||| ||||||    
T  50958978 tgttggaacactagtgtataatggaggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaagaatggagaaac 50959069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 27716962 - 27716870
Alignment:
Q  139 tgttggaacactagtgtatattgg--caaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||   | || |||| |||||||| |||| |||||||||| |||||||    
T  27716962 tgttggaacactagtgtataatggaaaaaaaacttggagtatactagtgagtttgtggagcctttggaacgtaagcacaaggatggagaaact 27716870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 51406700 - 51406668
Alignment:
Q  109 tatccttaacaattttggccaaacattatctgt 141  Q
    |||||||||||||||||||||||||||||||||    
T  51406700 tatccttaacaattttggccaaacattatctgt 51406668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 42572753 - 42572661
Alignment:
Q  137 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  42572753 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaact 42572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 12935235 - 12935145
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  12935235 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaact 12935145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 19308872 - 19308962
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  19308872 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaact 19308962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 17496179 - 17496095
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17496179 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 17496095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 17557035 - 17557119
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17557035 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 17557119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 42572679 - 42572595
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42572679 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 42572595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 17496251 - 17496161
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  17496251 tgttggaacactagtatatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaact 17496161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 17556963 - 17557053
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  17556963 tgttggaacactagtatatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaact 17557053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 32211961 - 32212051
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||    
T  32211961 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgttgagactttggaatgtaaacacaaggatggagaaact 32212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 43893693 - 43893603
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  43893693 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 43893603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 47176492 - 47176582
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  47176492 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 47176582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 2234020 - 2234104
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2234020 acacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 2234104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 12935163 - 12935079
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  12935163 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactttagtagtgttt 12935079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 19308944 - 19309028
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  19308944 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattggatagatcacacactctagtagtgttt 19309028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 47176564 - 47176648
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47176564 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 47176648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 21080389 - 21080473
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  21080389 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacgttgggtagatcacacactctagtagtgttt 21080473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 32212033 - 32212117
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  32212033 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacattgggtagatcacacactctagtagtgttt 32212117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 43893621 - 43893537
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| |||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  43893621 acacaatgatgtagaaactagcgtaaagtgtgaattgaaaattttatgtccctcattgggtagatcacacactctagtagtgttt 43893537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 33238500 - 33238421
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33238500 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 33238421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 33243677 - 33243598
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33243677 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 33243598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 47994298 - 47994219
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  47994298 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 47994219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 2233948 - 2234038
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| | || |||| |||||||||||||||||||||||| |||||||    
T  2233948 tgttggaaccctagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatgaagaaact 2234038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 21080317 - 21080407
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| | || |||| |||||||||||||||||||||||| |||||||    
T  21080317 tgttggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaact 21080407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 16538741 - 16538825
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| || ||||||||    
T  16538741 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattgagtagatcacacactttaatagtgttt 16538825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 16626921 - 16626837
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| || ||||||||    
T  16626921 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattgagtagatcacacactttaatagtgttt 16626837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 16538678 - 16538759
Alignment:
Q  149 ctagtgtatattggcaaaa-acttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  16538678 ctagtctatattggcaaaaaacttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaact 16538759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 16626984 - 16626903
Alignment:
Q  149 ctagtgtatattggcaaaaa-cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  16626984 ctagtctatattggcaaaaaacttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaact 16626903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 47999469 - 47999394
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  47999469 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacatcgggtagatcacacactctagtag 47999394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 33238572 - 33238482
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  33238572 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 33238482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 47994369 - 47994280
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  47994369 tgttggaacactagtgtatattga-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 47994280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 33243749 - 33243659
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| ||||||||||||||||| |||||||    
T  33243749 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacacaaggatggagaaact 33243659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 47999544 - 47999455
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||   | || |||| |||||||||||||||| ||||||| |||||||    
T  47999544 tgttggaacactagtgtatattgg-aaaaacttggagtatattagtgagtttgtggagcctttggaatgtaaacataaggatggagaaact 47999455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 47544745 - 47544827
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatg 221  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||    | || |||| ||||||||||||||||||||||||    
T  47544745 tgttggaacactagtgtataatgaaaaaaacttggagtatactagagagtttgtggagcctttggaatgtaaacacaaggatg 47544827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 8529 - 8620
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  8529 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaact 8620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 8602 - 8686
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8602 acacaaggatggagaaactagtgtaaagtgtgaatttaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 8686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 9763269 - 9763359
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  9763269 tgttggaacactagtgtatattggcataaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaact 9763359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 51018774 - 51018858
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51018774 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 51018858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 13695908 - 13695818
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  13695908 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 13695818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 13711521 - 13711431
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  13711521 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 13711431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 4207121 - 4207037
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4207121 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 4207037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 13695836 - 13695752
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13695836 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 13695752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 13711449 - 13711365
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13711449 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 13711365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 41394009 - 41393927
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  41394009 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtgaagcctttggaatgtaaacacaaggatg 41393927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 51018702 - 51018792
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  51018702 tgttgaaacactagtgtatattggcaaaaacttggaatatactagttgttatgtggagactttggaatgtacacacaaggatgtagaaact 51018792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 41393937 - 41393853
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41393937 acacaaggatggaaaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 41393853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 4207192 - 4207103
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||| ||||||||||||    
T  4207192 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgt-aacacaatgatgtagaaact 4207103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9763341 - 9763425
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  9763341 acacaaggatgtagaaactagtgtaaagcatgaattgaaaattttatgtcccacattgagtagatcacacactctagtagtgttt 9763425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 53798408 - 53798324
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  53798408 acacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcctacattgggtagatcacacactctagtagtgttt 53798324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 8985055 - 8985134
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  8985055 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 8985134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 13700955 - 13700876
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  13700955 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 13700876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 21299483 - 21299562
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  21299483 acacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 21299562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 21304603 - 21304682
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  21304603 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 21304682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 36354640 - 36354561
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  36354640 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 36354561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 36359826 - 36359747
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  36359826 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 36359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 47045699 - 47045772
Alignment:
Q  25 tagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  47045699 tagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattggatagatcacacactctagtagtgttt 47045772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 8979935 - 8980014
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  8979935 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccatatcgggtagatcacacactctagtag 8980014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 39999563 - 39999488
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  39999563 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 39999488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 40004521 - 40004446
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  40004521 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 54343697 - 54343622
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  54343697 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 54343622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 54348851 - 54348776
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  54348851 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 54348776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 54990460 - 54990539
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  54990460 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 54990539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 54991921 - 54991842
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  54991921 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 54991842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 53798480 - 53798390
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| | || |||| |||||||||||||||||||| ||| |||||||    
T  53798480 tgttggaacattagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaagaatggagaaact 53798390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 8979863 - 8979953
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  8979863 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 8979953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 8984983 - 8985073
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  8984983 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 8985073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 13701027 - 13700937
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  13701027 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 13700937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 21299411 - 21299501
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  21299411 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgaagaaact 21299501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 21304531 - 21304621
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  21304531 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 21304621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 47045616 - 47045706
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||| |||||||||||||||||| || |||||||||||||||||||||| |||| | || |||||||||||||| ||  ||||||||    
T  47045616 tgttggaatactagtgtatattggcaacaatttggagtatactagttgttatgaggagacattagaatgtaaacacaatgaaatagaaact 47045706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 54991993 - 54991903
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  54991993 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 54991903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 36354710 - 36354622
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| ||||||||||| |||||||||||| |||||||    
T  36354710 tgttggaacactagtgtataatg--aaaaacttggagtatactagtgaatttgtggagcctttggaatgttaacacaaggatggagaaact 36354622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 54990388 - 54990478
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||   | || |||| ||||||||||| |||||||||||| |||||||    
T  54990388 tgttggaacactaatgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgttaacacaaggatggagaaact 54990478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 40004598 - 40004507
Alignment:
Q  137 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||||    
T  40004598 tctgttggaacactagtgtataat-gaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaact 40004507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 39999638 - 39999549
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||||    
T  39999638 tgttggaacactagtgtataatga-aaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaact 39999549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 54343772 - 54343683
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||||    
T  54343772 tgttggaacactagtgtataatga-aaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaact 54343683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 54348926 - 54348837
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||||    
T  54348926 tgttggaacactagtgtataatga-aaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaact 54348837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 36359896 - 36359808
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||   | || |||| ||||| ||||| |||||||||||| |||||||    
T  36359896 tgttggaacactactgtataatg--aaaaacttggagtatactagtgagtttgtggagcctttgaaatgttaacacaaggatggagaaact 36359808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 30341200 - 30341290
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  30341200 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaact 30341290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 3476260 - 3476344
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3476260 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 3476344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 3481717 - 3481801
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3481717 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 3481801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 30338096 - 30338184
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaa 227  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  30338096 tgttggaacagtagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaa 30338184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 34128479 - 34128563
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34128479 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 34128563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 54271464 - 54271373
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  54271464 ctgttggaacactagtttatattggcaaaaacttgaagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaact 54271373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 3476188 - 3476278
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||| ||||||||||||    
T  3476188 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagaaattggaatgtaaacacaatgatgtagaaact 3476278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 4117018 - 4117102
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4117018 acacaatgatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 4117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 30338168 - 30338252
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30338168 acacaaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 30338252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 54271391 - 54271307
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  54271391 acacaaggatggagaaactagtctaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 54271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 4116946 - 4117036
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||||| |||| |||||||    
T  4116946 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggaaacattggaatgtaaacacaatgatgaagaaact 4117036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 17358644 - 17358561
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17358644 acacaaggatggagaaa-tagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 17358561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 30341272 - 30341356
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  30341272 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatggcccacattaggtagatcacacactctagtagtgttt 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 17369164 - 17369085
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17369164 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 17369085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 15762631 - 15762706
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  15762631 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 15762706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 15767792 - 15767867
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  15767792 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 15767867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 20090264 - 20090338
Alignment:
Q  19 aggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  20090264 aggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 20090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 20095389 - 20095463
Alignment:
Q  19 aggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  20095389 aggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 20095463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 55129228 - 55129156
Alignment:
Q  21 gatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtag 92  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  55129228 gatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 55129156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 34128405 - 34128497
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaa--acttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||||||||| | || |||| |||||||||||||||||||||||| |||||||    
T  34128405 tgttggaacactagtgtataatggaaaaaaaacttggagtatactagttgatttgtggagcctttggaatgtaaacacaaggatggagaaact 34128497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 3481645 - 3481735
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  3481645 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 3481735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 17369236 - 17369146
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||| |||| ||| |||||||| || ||||||||||| | || |||| |||||||||||||||||||||||| |||||||    
T  17369236 tgttggaacactagtatataatggaaaaaacttcgattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaact 17369146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 17358716 - 17358628
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaa 227  Q
    |||| |||||||||| |||| ||| ||||||||||| ||||||||||| | || |||| |||||||||||||||||||||||| |||||    
T  17358716 tgttagaacactagtatataatggaaaaaacttggattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaa 17358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 15762554 - 15762645
Alignment:
Q  137 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||| | | |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||||    
T  15762554 tctgttggaacactagtgtataat-gaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaact 15762645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 15767717 - 15767806
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||||    
T  15767717 tgttggaacactagtgtataatga-aaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaact 15767806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 20090187 - 20090277
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| |||||||||  |||||| |||||||    
T  20090187 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaact 20090277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 20095312 - 20095402
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| |||||||||  |||||| |||||||    
T  20095312 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaact 20095402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 55129309 - 55129228
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaa--cttggagtatactagttgttatgcggagtctttggaatgtaaacacaag 217  Q
    |||| |||||||||||||||| ||| |||||  ||||||||||||||||   | || |||| ||||||||||||||||||||    
T  55129309 ctgtcggaacactagtgtataatggaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaag 55129228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 7e-36; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 24885403 - 24885319
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24885403 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 24885319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 42513844 - 42513932
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  42513844 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaa 42513932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 24885466 - 24885385
Alignment:
Q  148 actagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  24885466 actagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaact 24885385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 43998614 - 43998698
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43998614 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 43998698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 17955202 - 17955286
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17955202 acacaaggatggagaaactagtgtgaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 17955286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 42513916 - 42514000
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  42513916 acacaaggatgtagaaaatagtgtaaagtgtgaattgaaaattttatgtcccacattggatagatcacacactctagtagtgttt 42514000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 32016198 - 32016119
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32016198 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 32016119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 21641122 - 21641209
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtaga 225  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| | || | |||||||||||| |||||||||||||    
T  21641122 ctgttggaacactagtgtatattggcaaaaacttgaagtatactagttgttatgtgcagacattggaatgtaaatacaaggatgtaga 21641209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 21641197 - 21641278
Alignment:
Q  16 acaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21641197 acaaggatgtagat-ctagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 21641278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 2165463 - 2165542
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  2165463 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacatcgggtagatcacacactctagtag 2165542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 32011024 - 32010945
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  32011024 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcatacactctagtag 32010945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 17955130 - 17955220
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||| ||| |||| |||||||||||||||| || |||| |||||||||||||||||||||||| |||||||    
T  17955130 tgttggaacactagtgtataatggaaaagacttagagtatactagttgttttgtggagcctttggaatgtaaacacaaggatggagaaact 17955220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 32011095 - 32011006
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  32011095 tgttggaacactagtgtatattgg-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 32011006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 32016269 - 32016180
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  32016269 tgttggaacactagtgtatattgg-aaaaacttggagtatactagtgaatttgtggagcctttggaatgtaaacacaaggatggagaaact 32016180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 43998542 - 43998632
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||| | || |||| ||||| |||||||||||||||||| |||||||    
T  43998542 tgttggaacactagtgtataatgaaaaaaacttggagtatactagttggtttgtggagcctttgaaatgtaaacacaaggatggagaaact 43998632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 2165390 - 2165481
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtcttt-ggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  ||||  |||||||||||||||   | || ||||||||| |||||||||||||||||||| |||||||    
T  2165390 tgttggaacactagtgtataatgaaaaaattttggagtatactagtgagtttgtggagtctttgggaatgtaaacacaaggatggagaaact 2165481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 24886431 - 24886394
Alignment:
Q  148 actagtgtatattggcaaaaacttggagtatactagtt 185  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24886431 actagtgtatattggcaaaaacttggagtatactagtt 24886394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 167
Target Start/End: Original strand, 21648779 - 21648807
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaa 167  Q
    |||||||||||||||||||||||||||||    
T  21648779 tgttggaacactagtgtatattggcaaaa 21648807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 28751019 - 28751107
Alignment:
Q  141 ttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  28751019 ttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaact 28751107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 4162963 - 4163047
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4162963 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 4163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 28751089 - 28751173
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28751089 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 28751173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 42723048 - 42723127
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  42723048 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 42723127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 42728217 - 42728296
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  42728217 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 42728296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 40392760 - 40392685
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  40392760 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 40392685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 44096796 - 44096721
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  44096796 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 44096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 44754207 - 44754282
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  44754207 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 44754282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 4162891 - 4162981
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||| | || |||| |||||||||||||||||||||||| |||||||    
T  4162891 tgttggaacactggtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaact 4162981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 40518117 - 40518197
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacat-tgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  40518117 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggggtagatcacacactctagtag 40518197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 40520083 - 40520003
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacat-tgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  40520083 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggggtagatcacacactctagtag 40520003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 44759373 - 44759448
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  44759373 aaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 44759448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 42728146 - 42728235
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  42728146 tgttggaacactagtgtatattgg-aaaaacttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 42728235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 42722977 - 42723066
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  42722977 tgttggaacactagtgtatattgg-aaaaatttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 42723066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 40392836 - 40392746
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| ||||| |||||||||| ||||||| |||||||    
T  40392836 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttgcaatgtaaacataaggatggagaaact 40392746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 40520158 - 40520065
Alignment:
Q  139 tgttggaacactagtgtatattggc--aaaaacttgg-agtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| |||   |||||||||| |||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  40520158 tgttggaacactagtgtataatggaggaaaaacttgggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 40520065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 44096871 - 44096782
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || ||||  ||||||||||||||| ||||||| |||||||    
T  44096871 tgttggaacactagtgtataatga-aaaaacttggagtatactagtgagtttgtggagcatttggaatgtaaacaaaaggatggagaaact 44096782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 44754132 - 44754221
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||||    
T  44754132 tgttggaacactagtgtataatga-aaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaact 44754221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 40518043 - 40518135
Alignment:
Q  139 tgttggaacactagtgtatattggc--aaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| |||   |||||||||||||||| ||||   | || |||| ||||||||| |||||||||||||| |||||||    
T  40518043 tgttggaacactagtgtataatggaggaaaaacttggagtataatagtgagtttgtggagcctttggaatataaacacaaggatggagaaact 40518135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 44759298 - 44759385
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaa 227  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||| ||||||||| ||||||| |||||    
T  44759298 tgttggaacactagtgtataatga-aaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaa 44759385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 12982 - 13072
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  12982 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 13072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 13054 - 13138
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13054 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 13138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 18439 - 18529
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  18439 tgttggaacactagtgtatattggcaaaaacttagagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 18529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18511 - 18595
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18511 acacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 18595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 24770601 - 24770691
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  24770601 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 24770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 36254668 - 36254578
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  36254668 tgttgaaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaact 36254578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 24770673 - 24770757
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24770673 acacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 24770757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 36254596 - 36254512
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  36254596 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgttccacattgggtagatcacacactctagtagtgttt 36254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 24776055 - 24776145
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  24776055 tgttggaacactagtgtatattggcaaaaactttgagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaact 24776145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 1413141 - 1413225
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  1413141 acacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtagatcacacactctagtagtgttt 1413225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 24776127 - 24776211
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24776127 acacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagtgttt 24776211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 17510503 - 17510424
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17510503 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 17510424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 1413068 - 1413159
Alignment:
Q  139 tgttggaacactagtgtatattgg-caaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||| || ||||||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  1413068 tgttggaaccctggtgtatattgggcaaaaatttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatgaagaaact 1413159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 43580105 - 43580026
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  43580105 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacatactctagtag 43580026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 17505398 - 17505319
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| | |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17505398 acacaaggatggaaaaactattgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 17505319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 26709767 - 26709683
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| | |||||||||||    
T  26709767 acacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtagattacacattgtagtagtgttt 26709683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 26979501 - 26979417
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| | |||||||||||    
T  26979501 acacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtagattacacattgtagtagtgttt 26979417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 41853914 - 41853846
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaatt-tatgtcccacattgggtagatcaca 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  41853914 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattctatgtcccacatcgggtagatcaca 41853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 17510576 - 17510485
Alignment:
Q  138 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  17510576 ctgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 17510485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 42020018 - 42019939
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| |||||||| |||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  42020018 acacaaggatggagaaactaatgtaaaatgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 42019939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 42024794 - 42024719
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  42024794 aaggatggagaaactagtgtaaaatgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 42024719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 42020090 - 42020000
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  42020090 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 42020000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 41859029 - 41858960
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaatt-tatgtcccacattgggtagatcacac 82  Q
    ||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  41859029 acacaaggatggaaaaattagtgtaaagtgtgaattgaaaattctatgtcccacatcgggtagatcacac 41858960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 43580179 - 43580087
Alignment:
Q  139 tgttggaacactagtgtatattggc--aaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  43580179 tgttggaacactagtgtataatggaggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 43580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 41859102 - 41859019
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaa-cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatg 221  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||   | || |||| ||||||||||||||||||||||||    
T  41859102 tgttggaacactagtgtataatggaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatg 41859019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 26709839 - 26709749
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||| ||||||||| ||| ||||| ||| ||||||||||||| | || |||| || ||||||||||||||||| ||| |||||||    
T  26709839 tgttggaacattagtgtataatggaaaaaatttgaagtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaact 26709749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 26979573 - 26979483
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||| ||||||||| ||| ||||| ||| ||||||||||||| | || |||| || ||||||||||||||||| ||| |||||||    
T  26979573 tgttggaacattagtgtataatggaaaaaatttgaagtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaact 26979483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 42024870 - 42024780
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  ||||||||| |||||||||||   | || |||| |||||||||||||||| ||||||| |||||||    
T  42024870 tgttggaacactagtgtataatgaaaaaaacttgaagtatactagtgagtttgtggagcctttggaatgtaaacataaggatggagaaact 42024780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 41853988 - 41853896
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaa--cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||    | || |||| |||||||||||||||||||||||| |||||||    
T  41853988 tgttggaacactagtgtataatggaaaaaaaacttggagtatactagggagtttgtggagcctttggaatgtaaacacaaggatggagaaact 41853896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 17505472 - 17505388
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaa--cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatg 221  Q
    |||||||||||||||||||| ||| |||||  |||||| |||||||||   | || |||| ||||||||||||||||||||||||    
T  17505472 tgttggaacactagtgtataatggaaaaaaaacttggaatatactagtgagtttgtggagcctttggaatgtaaacacaaggatg 17505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 4008 - 3929
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  4008 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 3929  T

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Target: scaffold0517; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 4081 - 3990
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaa-cttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  4081 tgttggaacactagtgtataatgaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 3990  T

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Target: scaffold0014 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 32043 - 31964
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  32043 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 31964  T

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Target: scaffold0014; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 26867 - 26792
Alignment:
Q  18 aaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  26867 aaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 26792  T

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Target: scaffold0014; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 32116 - 32025
Alignment:
Q  137 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  32116 tctgttggaacactattgtatattgg-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 32025  T

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Target: scaffold0014; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 26942 - 26853
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||| ||||||| |||||||    
T  26942 tgttcgaacactagtgtatattgg-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacaaaaggatggagaaact 26853  T

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Target: scaffold0055 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 3522 - 3443
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  3522 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatccggtagatcacacactctagtag 3443  T

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Target: scaffold0055; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 3593 - 3504
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  3593 tgttggaacactagtgtatattgg-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 3504  T

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Target: scaffold0052 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 81013 - 81092
Alignment:
Q  14 acacaaggatgtagaaactagtgtaaagtgtgaattgaaaa-tttatgtcccacattgggtagatcacacactctagtag 92  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  81013 acacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatccggtagatcacacactctagtag 81092  T

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Target: scaffold0052; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 80942 - 81031
Alignment:
Q  139 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggagtctttggaatgtaaacacaaggatgtagaaact 229  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   | || |||| |||||||||||||||||||||||| |||||||    
T  80942 tgttggaacactagtgtatattgg-aaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaact 81031  T

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Target: scaffold0060 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 37712 - 37649
Alignment:
Q  35 tgtaaagtgtgaattgaaaattt-atgtcccacattgggtagatcacacactctagtagtgttt 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  37712 tgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactccagtagtgttt 37649  T

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Target: scaffold0060; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 37775 - 37716
Alignment:
Q  137 tctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgcggag 196  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  37775 tctgttggaacactagtgtatattggcaaaaatttggagtatactagttgttatgtggag 37716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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