View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21207_high_1 (Length: 632)

Name: NF21207_high_1
Description: NF21207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21207_high_1
NF21207_high_1
[»] chr4 (21 HSPs)
chr4 (193-620)||(21831591-21832015)
chr4 (18-163)||(21831416-21831561)
chr4 (193-299)||(10352612-10352718)
chr4 (193-299)||(12214971-12215077)
chr4 (193-298)||(31854006-31854111)
chr4 (193-301)||(1818048-1818156)
chr4 (194-301)||(49062671-49062781)
chr4 (193-302)||(29898790-29898899)
chr4 (194-301)||(49062237-49062345)
chr4 (193-298)||(20635641-20635747)
chr4 (193-298)||(40529353-40529456)
chr4 (193-271)||(41998220-41998298)
chr4 (193-301)||(29995711-29995820)
chr4 (194-299)||(30216471-30216576)
chr4 (250-307)||(45766219-45766276)
chr4 (201-293)||(12213952-12214044)
chr4 (193-296)||(13390729-13390833)
chr4 (250-298)||(24559842-24559890)
chr4 (250-298)||(26571564-26571612)
chr4 (261-301)||(35218625-35218665)
chr4 (250-301)||(47385672-47385726)
[»] chr7 (14 HSPs)
chr7 (193-298)||(32199468-32199574)
chr7 (194-301)||(40347074-40347180)
chr7 (193-301)||(8394460-8394566)
chr7 (250-301)||(31252067-31252118)
chr7 (193-272)||(33131256-33131335)
chr7 (193-299)||(7003058-7003164)
chr7 (193-299)||(7048929-7049035)
chr7 (194-299)||(8867460-8867565)
chr7 (193-270)||(21359833-21359909)
chr7 (193-301)||(36631151-36631257)
chr7 (250-299)||(44832669-44832718)
chr7 (95-150)||(6649978-6650034)
chr7 (43-111)||(45710154-45710222)
chr7 (193-237)||(47610566-47610610)
[»] scaffold0134 (1 HSPs)
scaffold0134 (193-298)||(17643-17748)
[»] chr6 (7 HSPs)
chr6 (193-298)||(21555726-21555830)
chr6 (42-141)||(8927445-8927544)
chr6 (42-141)||(8937702-8937801)
chr6 (195-301)||(33229066-33229172)
chr6 (196-295)||(30132933-30133032)
chr6 (193-301)||(29743614-29743723)
chr6 (193-242)||(33202823-33202872)
[»] chr2 (8 HSPs)
chr2 (224-301)||(15512300-15512377)
chr2 (193-298)||(37621788-37621893)
chr2 (228-298)||(13444986-13445056)
chr2 (224-293)||(3843600-3843669)
chr2 (243-290)||(30325541-30325588)
chr2 (194-248)||(29425343-29425397)
chr2 (244-302)||(42705440-42705498)
chr2 (193-298)||(21556431-21556536)
[»] chr1 (4 HSPs)
chr1 (193-301)||(41971985-41972093)
chr1 (224-299)||(9256293-9256370)
chr1 (224-301)||(39512723-39512800)
chr1 (193-292)||(18006843-18006943)
[»] chr8 (13 HSPs)
chr8 (193-271)||(378786-378864)
chr8 (193-301)||(36408871-36408979)
chr8 (193-299)||(9877553-9877659)
chr8 (193-269)||(14707460-14707536)
chr8 (234-298)||(15862901-15862965)
chr8 (193-281)||(27326564-27326652)
chr8 (250-301)||(40401290-40401341)
chr8 (228-301)||(15317381-15317455)
chr8 (228-301)||(15497750-15497824)
chr8 (28-118)||(17480044-17480134)
chr8 (193-259)||(32540191-32540257)
chr8 (224-293)||(19373-19442)
chr8 (193-300)||(3648520-3648625)
[»] chr3 (14 HSPs)
chr3 (223-290)||(17384258-17384325)
chr3 (193-299)||(19565229-19565335)
chr3 (228-301)||(16094429-16094502)
chr3 (193-301)||(35938008-35938116)
chr3 (193-301)||(19814443-19814550)
chr3 (193-245)||(25895096-25895148)
chr3 (20-118)||(8257449-8257547)
chr3 (250-299)||(8257160-8257209)
chr3 (194-239)||(27912400-27912445)
chr3 (250-299)||(30122570-30122619)
chr3 (20-89)||(31516000-31516069)
chr3 (194-299)||(33041286-33041391)
chr3 (28-88)||(16094646-16094706)
chr3 (252-296)||(43002725-43002769)
[»] chr5 (5 HSPs)
chr5 (194-301)||(34236404-34236511)
chr5 (193-299)||(15034721-15034827)
chr5 (224-293)||(32279756-32279826)
chr5 (47-116)||(26875250-26875319)
chr5 (43-107)||(27023035-27023099)
[»] scaffold0515 (1 HSPs)
scaffold0515 (193-242)||(10958-11007)
[»] scaffold0152 (2 HSPs)
scaffold0152 (193-242)||(18528-18577)
scaffold0152 (193-242)||(37354-37403)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-160)||(1876-2017)


Alignment Details
Target: chr4 (Bit Score: 355; Significance: 0; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 193 - 620
Target Start/End: Original strand, 21831591 - 21832015
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21831591 aaaaattcataattaatttgtcccttgacgcaaaattccaattttatgtgaaaagttatattttaacatcttaaacatgcatgtaaaaaatcatgaaaaa 21831690  T
Q  293 attcaaccttgaggttatttctctcgactttatgtcttcaacttgattgggatgaccttggtatccaagtgccctcctcgaaagcgatcgtggtatttga 392  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21831691 attcaacctcgaggttatttctctcgactttatgtcttcaacttgattgggatgaccttggtatccaagtgccctcctcgaaagccatcgtggtatttga 21831790  T
Q  393 tcactccattaataccatgtttgagatctaatgtcctcattgatgtttttatcggtctacaaagnnnnnnnnnnnnnnnngcttattttaaatgtatttt 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||    
T  21831791 tcactccattaataccatgtttgagatctaatgtcctcattgatgtttttatcggtctacaaag---tttttttttttttgcttattttaaatgtatttt 21831887  T
Q  493 caggttatttcaagttcgaactccatgtggttgatgagatctctataagatgaacttgttttgttgataccatatttgatgtaagagacgaatgctgatt 592  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21831888 caggttatttcaagttcgaactccatgtggttgatgagatctctataagatgaacttgttttgttgataccatatttggtgtaagagacgaatgctgatt 21831987  T
Q  593 atcatgaaattatgcatcctattagtat 620  Q
    ||||||||||||||||||||||||||||    
T  21831988 atcatgaaattatgcatcctattagtat 21832015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 21831416 - 21831561
Alignment:
Q  18 gtaattttgtacattttgattgaataatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatgtc 117  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21831416 gtaattttgtacgttttggttgaataatcaaaataaattgaggcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatatc 21831515  T
Q  118 tatctaaacaatcatctcgaaattgatttctaggttaagatttctg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21831516 tatctaaacaatcatctcgaaattgatttctaggttaagatttctg 21831561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 10352612 - 10352718
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||||| || | || | ||||||| |||| |||| ||||||||||| |  ||||||||  || |||||||  |||||||    
T  10352612 aaaaattcataattaatttatcccttgtcgaagaaatttaattttttgtgtaaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaa 10352711  T
Q  293 attcaac 299  Q
    |||||||    
T  10352712 attcaac 10352718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 12214971 - 12215077
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||| ||| |||| ||||||| |||| |  |||||||||||||||||||| |  | |||||||||  || ||||||||| || || |||||||||||||    
T  12214971 aaaaactcaaaattgatttgtcacttgtcagaaaattctaattttatgtgatagttcatattttaatgtcctaaacatgcttgcaagaaatcatgaaaaa 12215070  T
Q  293 attcaac 299  Q
    |||||||    
T  12215071 attcaac 12215077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 31854006 - 31854111
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    |||| ||||||||||||| |||| | |  | ||||||||| |||| |||| ||||| |||||||||| |  ||||||||| || ||||||||| ||||||    
T  31854006 aaaatttcataattaattcgtccttagttgaaaaattctacttttttgtgtaaagtgatattttaacgttctaaacatgcatggaaaaaatcaagaaaaa 31854105  T
Q  293 attcaa 298  Q
    ||||||    
T  31854106 attcaa 31854111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 1818156 - 1818048
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| |||| |||| ||||||||||| |  ||||||||  || |||||||  |||||||    
T  1818156 aaaaattcataattaatttatccctagtcgaagaaatttaattttttgtgtaaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaa 1818057  T
Q  293 attcaacct 301  Q
    |||||||||    
T  1818056 attcaacct 1818048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 49062671 - 49062781
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaaca---tgcgtgtaaaaaatcatgaaa 290  Q
    ||||||||||||||||   || |||| || |||||| ||||||| |||||||| | |||||||||| || ||||||   ||  || ||||||||||||||    
T  49062671 aaaattcataattaatcattctcttgtcgaaaaattttaattttttgtgaaaaatcatattttaacgtcctaaacaatatgtatgcaaaaaatcatgaaa 49062770  T
Q  291 aaattcaacct 301  Q
    |||||||||||    
T  49062771 aaattcaacct 49062781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 29898899 - 29898790
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||  ||| |||| |||| || |||||||||||||||||| |||| | |||  ||||  || |||| |||| || ||||||| ||||||||    
T  29898899 aaaaattcataagaaatatgtctcttgtcggaaaattctaattttatgtaaaaactgataacttaatgtcctaaatatgcttgcaaaaaatgatgaaaaa 29898800  T
Q  293 attcaacctt 302  Q
    | ||||||||    
T  29898799 actcaacctt 29898790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 49062345 - 49062237
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatga-aaaa 292  Q
    |||||||||||||||| ||||| |||    ||| ||||||  || |||| ||||  ||||||||||||| ||||||||| || | |||||||||| ||||    
T  49062345 aaaattcataattaatatgtccattgtttgaaacttctaaacttttgtggaaagccatattttaacatcctaaacatgcctggagaaaatcatgacaaaa 49062246  T
Q  293 attcaacct 301  Q
    |||||||||    
T  49062245 attcaacct 49062237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 20635747 - 20635641
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtg-taaaaaatcatgaaaa 291  Q
    |||||||||||||||||| ||| |||| || ||| |||||||||| |||| |||   |||||||||  || ||||||||| ||  |||||| ||| ||||    
T  20635747 aaaaattcataattaattcgtctcttgtcgaaaagttctaattttttgtgtaaaacaatattttaaagtcctaaacatgcatgaaaaaaaagcataaaaa 20635648  T
Q  292 aattcaa 298  Q
    |||||||    
T  20635647 aattcaa 20635641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 40529456 - 40529353
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| |||  |||||||||||||||| |  ||||||||  || |||||||  |||||||    
T  40529456 aaaaattcataattaatttatccctggtcgaagaaatttaattttgtgt--aaagttatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaa 40529359  T
Q  293 attcaa 298  Q
    ||||||    
T  40529358 attcaa 40529353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 41998220 - 41998298
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatg 271  Q
    ||||||||||||||||||  | ||||| || |||| ||||||||||||||  | | | ||||||||| |||||||||||    
T  41998220 aaaaattcataattaattcattccttgtcgaaaaaatctaattttatgtgggatgctttattttaacgtcttaaacatg 41998298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 301
Target Start/End: Original strand, 29995711 - 29995820
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttat-gtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaa 291  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| | ||| |||| ||||||||||| |  ||||||||  || |||||||  ||||||    
T  29995711 aaaaattcataattaatttatccctggtcgaagaaatttaatttttttgtgtaaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaa 29995810  T
Q  292 aattcaacct 301  Q
    ||||||||||    
T  29995811 aattcaacct 29995820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 30216471 - 30216576
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    |||||||||||||||||| || || | || | || | ||||||| | || |||| ||||||||||| | |||| ||||  || ||||||| |||||||||    
T  30216471 aaaattcataattaatttatctctggtcgaagaaatttaattttttatgtaaagctatattttaacgtgttaatcatgtatgaaaaaaataatgaaaaaa 30216570  T
Q  294 ttcaac 299  Q
    ||||||    
T  30216571 ttcaac 30216576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 45766276 - 45766219
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaaccttgaggt 307  Q
    |||||||||  |||||||||||| || |||||||||||||| ||||||| ||| ||||    
T  45766276 atattttaatctcttaaacatgcttgaaaaaaatcatgaaagaattcaatctttaggt 45766219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 12214044 - 12213952
Alignment:
Q  201 ataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    ||||||| | ||||| ||| || || ||| ||||||||||||| |||| |||||||| | || || |||||| | ||||| ||||||||||||    
T  12214044 ataattattatgtccattgtcgaaatattttaattttatgtgagaagtcatattttatcgtcctagacatgcctataaaatatcatgaaaaaa 12213952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 13390833 - 13390729
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattct-aattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaa 291  Q
    ||||||||||||||||||||||  ||| || ||| || | |||||| |||| ||||  |||||||||| |  | ||| ||||| ||| ||||||||||||    
T  13390833 aaaaattcataattaatttgtcatttgtcgaaaatttataaattttttgtgtaaagccatattttaacgttcttaacttgcgtctaacaaatcatgaaaa 13390734  T
Q  292 aattc 296  Q
    |||||    
T  13390733 aattc 13390729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 24559842 - 24559890
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaa 298  Q
    |||||||||| || ||||||||| |||| || |||||||||||||||||    
T  24559842 atattttaacttcctaaacatgcctgtacaatatcatgaaaaaattcaa 24559890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 26571612 - 26571564
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaa 298  Q
    ||||||||||||| ||||||||| || ||||||| || |||||||||||    
T  26571612 atattttaacatcctaaacatgcatgaaaaaaattataaaaaaattcaa 26571564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 35218625 - 35218665
Alignment:
Q  261 tcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    ||||||||||||||| |||||||| |||||||||| |||||    
T  35218625 tcttaaacatgcgtgcaaaaaatcgtgaaaaaatttaacct 35218665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 47385726 - 47385672
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaa---tcatgaaaaaattcaacct 301  Q
    |||||||||| |||||||||||| || ||||||   |||||||||||||||||||    
T  47385726 atattttaacgtcttaaacatgcctgaaaaaaaaaatcatgaaaaaattcaacct 47385672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 7e-20; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 32199468 - 32199574
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttat-gtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaa 291  Q
    |||||||||||||||||| ||| ||||  | |||||| ||||||| | ||||||  || |||||||||||||||||||||  ||||||||||||||||||    
T  32199468 aaaaattcataattaattagtctcttgttgaaaaattataatttttttgtgaaagtttgtattttaacatcttaaacatgtttgtaaaaaatcatgaaaa 32199567  T
Q  292 aattcaa 298  Q
    |||||||    
T  32199568 aattcaa 32199574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 40347180 - 40347074
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    |||||||||| ||||||| || |||| |  |||||||||||||| |||| ||||  |||||||||| |   |||||||| ||||| ||||||||||||||    
T  40347180 aaaattcata-ttaatttatcacttgtctaaaaattctaattttgtgtggaaagccatattttaacgtaccaaacatgcctgtaataaatcatgaaaaaa 40347082  T
Q  294 ttcaacct 301  Q
    ||||||||    
T  40347081 ttcaacct 40347074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 8394566 - 8394460
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| |||  |||| ||||||||||| |  ||||||||  || ||||||| ||||||||    
T  8394566 aaaaattcataattaatttatccctagtcgaagaaatttaattttgtgt--aaagctatattttaacgtgctaaacatgtatggaaaaaataatgaaaaa 8394469  T
Q  293 attcaacct 301  Q
    |||||||||    
T  8394468 attcaacct 8394460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 31252118 - 31252067
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    ||||||||||||||||||| | | || ||||||||||||||||||| |||||    
T  31252118 atattttaacatcttaaacttacttggaaaaaatcatgaaaaaatttaacct 31252067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 33131335 - 33131256
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgc 272  Q
    ||||||||||||||||| ||||| ||| |  |||||| |||||||| ||| ||||| ||||||||||  | |||||||||    
T  33131335 aaaaattcataattaatctgtccattgtctgaaaattataattttacgtggaaagtcatattttaacgacataaacatgc 33131256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 7003164 - 7003058
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| | || |||  ||||||||||| |  ||||||||  || ||||||| ||||||||    
T  7003164 aaaaattcataattaatttatccctggtcgaagaaatttaattttttatgtaaaactatattttaacgtgctaaacatgtatgaaaaaaataatgaaaaa 7003065  T
Q  293 attcaac 299  Q
    |||||||    
T  7003064 attcaac 7003058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 7049035 - 7048929
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| | || |||  ||||||||||| |  ||||||||  || ||||||| ||||||||    
T  7049035 aaaaattcataattaatttatccctggtcgaagaaatttaattttttatgtaaaactatattttaacgtgctaaacatgtatgaaaaaaataatgaaaaa 7048936  T
Q  293 attcaac 299  Q
    |||||||    
T  7048935 attcaac 7048929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 8867460 - 8867565
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    |||||||||||||||||| || || | || | || | ||||||| | || |||| ||||||||||| |  ||||||||  || ||||||| |||||||||    
T  8867460 aaaattcataattaatttatctctggtcgaagaaatttaattttttatgtaaagctatattttaacgtgctaaacatgtatgaaaaaaataatgaaaaaa 8867559  T
Q  294 ttcaac 299  Q
    ||||||    
T  8867560 ttcaac 8867565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 21359833 - 21359909
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacat 270  Q
    ||||||||||||||||| ||||||| | || |||| | ||| |||||||||||| | |||||||||| || |||||||    
T  21359833 aaaaattcataattaatatgtccctcgtcgaaaaactttaa-tttatgtgaaaaataatattttaacttcataaacat 21359909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 36631257 - 36631151
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| |||  |||| ||||||||||| |  ||||||||  || |||||||  |||||||    
T  36631257 aaaaattcataattaatttatccctagtcgaagaaatttaattttgtgt--aaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaa 36631160  T
Q  293 attcaacct 301  Q
    |||||||||    
T  36631159 attcaacct 36631151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 44832669 - 44832718
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaac 299  Q
    |||||||||| || |||| |||| || |||||||||||||||||||||||    
T  44832669 atattttaacgtcctaaatatgcatgaaaaaaatcatgaaaaaattcaac 44832718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 6649978 - 6650034
Alignment:
Q  95 ttctatgtatttttatatatgtctatctaaacaatcatctcgaaatt-gatttctag 150  Q
    |||||||||||||||||||||||| | || ||||||| ||| ||||| |||||||||    
T  6649978 ttctatgtatttttatatatgtctttgtagacaatcaactcaaaattagatttctag 6650034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 45710154 - 45710222
Alignment:
Q  43 aatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttata 111  Q
    |||||||||||||||| |||| ||| ||||  | ||||| ||||||  ||| |||||||||||||||||    
T  45710154 aatcaaaataaattgaggcttatttgaaatgttgtaaaattttgcagattctttctatgtatttttata 45710222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 47610610 - 47610566
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaatttt 237  Q
    ||||||||||| ||||||||||||||| || ||||||| ||||||    
T  47610610 aaaaattcatatttaatttgtcccttgtcgaaaaattcaaatttt 47610566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 17748 - 17643
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||||||||| |    |||| ||||||||| |||| |||| |||||||||| ||| ||||||||  || ||||||||||||||||    
T  17748 aaaaattcataattaatttgtccctagtaaaaaaaatctaattttttgtgtaaagctatattttaatatcctaaacatgtctggaaaaaatcatgaaaaa 17649  T
Q  293 attcaa 298  Q
    ||||||    
T  17648 attcaa 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 21555830 - 21555726
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||| ||||||||||||||||| |  |||||||||||||| | || |||| |||||||||||||| | ||||||  ||||||||||||| ||| |    
T  21555830 aaaaattcacaattaatttgtcccttgtcaaaaaattctaatttt-tctgtaaagctatattttaacatccttaacatgtttgtaaaaaatcataaaata 21555732  T
Q  293 attcaa 298  Q
    ||||||    
T  21555731 attcaa 21555726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 8927544 - 8927445
Alignment:
Q  42 taatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatgtctatctaaacaatcatctcgaaatt 141  Q
    |||| ||||||||| |||||||||||| |||  ||||||||| ||||| | | ||||||||| ||||||| | |||| | |||| ||||||||| |||||    
T  8927544 taataaaaataaatagatgcttctttagaatattataaaactatgcatatcctttctatgtaattttatagacgtctttgtaaaaaatcatctcaaaatt 8927445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 8937801 - 8937702
Alignment:
Q  42 taatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatgtctatctaaacaatcatctcgaaatt 141  Q
    |||| ||||||||| |||||||||||| |||  ||||||||| ||||| | | ||||||||| ||||||| | |||| | |||| ||||||||| |||||    
T  8937801 taataaaaataaatagatgcttctttagaatattataaaactatgcatatcctttctatgtaattttatagacgtctttgtaaaaaatcatctcaaaatt 8937702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 33229066 - 33229172
Alignment:
Q  195 aaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaat 294  Q
    ||||||||||||||||| ||||| | || | || | ||||||| |||| |||| ||||||||||| |  ||||||||  || |||||||  |||||||||    
T  33229066 aaattcataattaatttatccctggtcgaagaaatttaattttttgtgtaaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaaat 33229165  T
Q  295 tcaacct 301  Q
    |||||||    
T  33229166 tcaacct 33229172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 30132933 - 30133032
Alignment:
Q  196 aattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaatt 295  Q
    ||||||| |||| || ||||||||  | |||||| |||||||| | | ||||  ||||||||||||| ||| ||| | ||||||||| ||||||||||||    
T  30132933 aattcattattatttcgtcccttggtggaaaattataattttacgagcaaagacatattttaacatcctaaccattcctgtaaaaaaccatgaaaaaatt 30133032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 29743723 - 29743614
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttat-gtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaa 291  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| | ||| |||| ||||||||||| |  ||||||||  || |||||||  ||||||    
T  29743723 aaaaattcataattaatttatccctagtcgaagaaatttaatttttttgtgtaaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaa 29743624  T
Q  292 aattcaacct 301  Q
    ||||||||||    
T  29743623 aattcaacct 29743614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 33202872 - 33202823
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtg 242  Q
    ||||||||||| ||||||||||||||| || ||||||| |||||| ||||    
T  33202872 aaaaattcatatttaatttgtcccttgtcgaaaaattcaaattttttgtg 33202823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 15512300 - 15512377
Alignment:
Q  224 aaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    |||||||||||||| |||| || ||  ||||||||| || ||||||||| || |||||||||||||||||||||||||    
T  15512300 aaaattctaattttttgtgtaatgtcgtattttaacgtcctaaacatgcctgaaaaaaatcatgaaaaaattcaacct 15512377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 37621788 - 37621893
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    |||||||||||||||||  |||||| | || |||| ||| ||||| |||| |||  ||| |||||||||| |||| || | || ||||||||||||||||    
T  37621788 aaaaattcataattaatccgtccctagtcggaaaaatctgattttttgtgtaaaactatgttttaacatcctaaagattcctgaaaaaaatcatgaaaaa 37621887  T
Q  293 attcaa 298  Q
    ||||||    
T  37621888 attcaa 37621893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 13445056 - 13444986
Alignment:
Q  228 ttctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaa 298  Q
    |||||||||||| |||||||| | |||||||| ||  ||||||| ||| | ||||||||||||||||||||    
T  13445056 ttctaattttatatgaaaagtcagattttaacgtcacaaacatgtgtgcataaaatcatgaaaaaattcaa 13444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 3843669 - 3843600
Alignment:
Q  224 aaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||||||||  | ||||||||  ||||||||    
T  3843669 aaaattctaattttatgtagaaaattatattttaacatcctaaacatgtctataaaaaatattgaaaaaa 3843600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 30325588 - 30325541
Alignment:
Q  243 aaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaa 290  Q
    |||| ||||||||||||||| ||||||||| |||||| ||||||||||    
T  30325588 aaaatttatattttaacatcataaacatgcttgtaaataatcatgaaa 30325541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 29425397 - 29425343
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagt 248  Q
    |||||||||||||| |||||| |||| || ||||||||||||||||  |||||||    
T  29425397 aaaattcataattattttgtctcttgtcgtaaaattctaattttataagaaaagt 29425343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 42705498 - 42705440
Alignment:
Q  244 aaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacctt 302  Q
    ||||| |||||||||| |  |||||||| |||||| |||||||||||| ||||||||||    
T  42705498 aaagtcatattttaacgttctaaacatgtgtgtaataaatcatgaaaacattcaacctt 42705440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 21556536 - 21556431
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||| | || |||||| | || |||| ||||||||| |||| ||||  || |||||||||| ||||  ||| ||  |||||| ||||||||    
T  21556536 aaaaattcataataatttcgtccctagtcggaaaaatctaattttttgtgtaaagccatgttttaacatcctaaaggtgcctgataaaaattatgaaaaa 21556437  T
Q  293 attcaa 298  Q
    ||||||    
T  21556436 attcaa 21556431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 193 - 301
Target Start/End: Original strand, 41971985 - 41972093
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||| ||| ||||||| || | || | ||||||| |||| |||| |||||||||||||  ||||||||  || |||||||  |||||||    
T  41971985 aaaaattcataattactttatcccttgtcgaagaaatttaattttttgtgtaaagctatattttaacatgctaaacatgtatgaaaaaaatagtgaaaaa 41972084  T
Q  293 attcaacct 301  Q
    |||||||||    
T  41972085 attcaacct 41972093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 9256293 - 9256370
Alignment:
Q  224 aaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtg--taaaaaatcatgaaaaaattcaac 299  Q
    ||||||||||||||  ||| ||||  |||||||||||| |||||||||| ||   |||||||| ||||||||||||||    
T  9256293 aaaattctaatttttggtggaaagacatattttaacattttaaacatgcctgaaaaaaaaatcgtgaaaaaattcaac 9256370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 39512723 - 39512800
Alignment:
Q  224 aaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    ||||||||||||||| ||| |||||  | ||| ||| || ||||||| | |||||||||| || ||||||||||||||    
T  39512723 aaaattctaattttacgtggaaagtcgtgtttaaacgtcctaaacatacatgtaaaaaattataaaaaaattcaacct 39512800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 18006943 - 18006843
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaa-aaatcatgaaaa 291  Q
    |||||||||||| ||||| ||| |||| || |||||||||| ||| | || ||| | || ||||||  |||||||||||| | |||| ||||||||||||    
T  18006943 aaaaattcataactaattcgtctcttgccgaaaaattctaaatttgtatggaaattcatgttttaatgtcttaaacatgcctataaataaatcatgaaaa 18006844  T
Q  292 a 292  Q
    |    
T  18006843 a 18006843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 378864 - 378786
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatg 271  Q
    ||||||||||||||||||||||||| | || |||| | ||||||| |||| |||| |||||||||||||  ||||||||    
T  378864 aaaaattcataattaatttgtccctggtcgaaaaaatttaattttttgtgtaaagctatattttaacatgctaaacatg 378786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 36408979 - 36408871
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| |||| |||| ||||||||||| |  ||||||||  || |||||||  |||||||    
T  36408979 aaaaattcataattaatttatccctagtcgaagaaatttaattttttgtgtaaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaa 36408880  T
Q  293 attcaacct 301  Q
    |||||||||    
T  36408879 attcaacct 36408871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 9877659 - 9877553
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| | || |||| ||||||||||| |  ||||||||  || ||||||| ||||||||    
T  9877659 aaaaattcataattaatttatccctggtcgaagaaatttaattttttatgtaaagctatattttaacgtgctaaacatgtatgaaaaaaataatgaaaaa 9877560  T
Q  293 attcaac 299  Q
    |||||||    
T  9877559 attcaac 9877553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 14707460 - 14707536
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaaca 269  Q
    ||||||||||||||||| ||||  |||  | |||||||| ||||||||| |||||| ||||||||| ||| ||||||    
T  14707460 aaaaattcataattaatctgtcatttgttggaaaattctgattttatgtaaaaagtcatattttaaaatcataaaca 14707536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 15862965 - 15862901
Alignment:
Q  234 ttttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaa 298  Q
    |||| |||| ||||| |||||||||| ||  |||||| |||| ||||||||||||||||||||||    
T  15862965 ttttttgtgtaaagtcatattttaacgtcccaaacatacgtgaaaaaaatcatgaaaaaattcaa 15862901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 281
Target Start/End: Original strand, 27326564 - 27326652
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaa 281  Q
    ||||||||||||||| | | ||| ||| |  ||||||  | |||| |||| ||||| ||||||||||||| ||||||||||||||||||    
T  27326564 aaaaattcataattattctatcctttgtcagaaaattacatttttttgtggaaagtaatattttaacatcataaacatgcgtgtaaaaa 27326652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 40401290 - 40401341
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    ||||||||||||||||||||||  || ||||||| ||||||||||| |||||    
T  40401290 atattttaacatcttaaacatgtatggaaaaaattatgaaaaaatttaacct 40401341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 15317381 - 15317455
Alignment:
Q  228 ttctaattttatgtgaaaagttatatttt-aacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    |||||||||| |||| ||||| ||||||| ||| ||  |||||||| || || ||||||||||||||||||||||    
T  15317381 ttctaattttttgtggaaagtcatatttttaacgtcccaaacatgcttgaaacaaatcatgaaaaaattcaacct 15317455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 15497750 - 15497824
Alignment:
Q  228 ttctaattttatgtgaaaagttatatttt-aacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    |||||||||| |||| ||||| ||||||| ||| ||  |||||||| || || ||||||||||||||||||||||    
T  15497750 ttctaattttttgtggaaagtcatatttttaacgtcccaaacatgcttgaaacaaatcatgaaaaaattcaacct 15497824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 17480044 - 17480134
Alignment:
Q  28 acattttgattgaataatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatgtct 118  Q
    |||||||| ||||| |||||||||||||| | |||| | | |||| |||||||||||| ||  | | |||||| |||||||||| ||||||    
T  17480044 acattttggttgaaaaatcaaaataaattcaagcttttatgaaatgctataaaactttccagatcctttctatctatttttatagatgtct 17480134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 32540191 - 32540257
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaac 259  Q
    ||||||||||||||||||||||||| | |  |||| |||| |||| |||| ||||| ||||||||||    
T  32540191 aaaaattcataattaatttgtccctagtcaaaaaaatctatttttttgtgtaaagtcatattttaac 32540257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 19373 - 19442
Alignment:
Q  224 aaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    |||||||||||||||| || ||||  ||| |||||| || ||||||||  || |||||||||||||||||    
T  19373 aaaattctaattttatatggaaagacatactttaacgtcctaaacatgaatgcaaaaaatcatgaaaaaa 19442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 3648520 - 3648625
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| |||  |||| ||||||||||| |  ||||||||  || |||||||  |||||||    
T  3648520 aaaaattcataattaatttatccctggtcgaagaaatttaattttgtgt--aaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaa 3648617  T
Q  293 attcaacc 300  Q
    ||||||||    
T  3648618 attcaacc 3648625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 17384258 - 17384325
Alignment:
Q  223 caaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaa 290  Q
    |||||||||||||||||||| || ||  ||||||||| |||||||||||| || ||||| ||||||||    
T  17384258 caaaattctaattttatgtgtaaggtcttattttaacgtcttaaacatgcatggaaaaattcatgaaa 17384325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 19565229 - 19565335
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||| ||||| | || | || | ||||||| |||| |||| ||||||||||| |  ||||||||  || |||||||  |||||||    
T  19565229 aaaaattcataattaatttatccctggtcgaagaaatttaattttttgtgtaaagctatattttaacgtgctaaacatgtatgaaaaaaatagtgaaaaa 19565328  T
Q  293 attcaac 299  Q
    |||||||    
T  19565329 attcaac 19565335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 16094502 - 16094429
Alignment:
Q  228 ttctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaacct 301  Q
    ||||||||||||||| | | | |||||||||| || |||| ||||  | |||||||||||||||||||||||||    
T  16094502 ttctaattttatgtgtacattcatattttaacctcctaaagatgctcgaaaaaaatcatgaaaaaattcaacct 16094429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 301
Target Start/End: Original strand, 35938008 - 35938116
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcat-gaaaa 291  Q
    |||||||||||||||||| |||  | |  | |||||||||||||| | || || || |||||||||| |||||||||||  || |||||||||| |||||    
T  35938008 aaaaattcataattaattcgtctttagttgaaaaattctaattttttatgtaatgtcatattttaacgtcttaaacatgtttg-aaaaaatcatggaaaa 35938106  T
Q  292 aattcaacct 301  Q
    ||||||||||    
T  35938107 aattcaacct 35938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 19814550 - 19814443
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    |||| ||||||||||||| |||| | |  | |||| || | |||| |||| ||||| |||||||||| |||||||||| | || ||||||| ||||||||    
T  19814550 aaaatttcataattaattcgtccttagttgaaaaactcaatttttttgtgtaaagtcatattttaacgtcttaaacatacctg-aaaaaattatgaaaaa 19814452  T
Q  293 attcaacct 301  Q
    |||||||||    
T  19814451 attcaacct 19814443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 25895148 - 25895096
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaa 245  Q
    ||||||| ||||||||||||||| ||| |  ||||||||||||||||||||||    
T  25895148 aaaaatttataattaatttgtcctttgtcaaaaaattctaattttatgtgaaa 25895096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 8257449 - 8257547
Alignment:
Q  20 aattttgtacattttgattgaataatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatgtct 118  Q
    ||||||| || ||||| ||||| ||| ||||||||||||  | ||||| |||| |||| ||||||||||| | | || ||| |||||||||| ||||||    
T  8257449 aattttgcacgttttggttgaaaaataaaaataaattgaaacgtctttgaaatgctatgaaactttgcatatcctttttatatatttttatagatgtct 8257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 8257209 - 8257160
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaac 299  Q
    |||||||||| |||||||||||  || ||||||| |||||||||||||||    
T  8257209 atattttaacgtcttaaacatgtctgaaaaaaattatgaaaaaattcaac 8257160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 27912445 - 27912400
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttat 239  Q
    |||||||||||||||| | ||||||| || ||||||||||||||||    
T  27912445 aaaattcataattaatctttcccttgtcggaaaattctaattttat 27912400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 30122619 - 30122570
Alignment:
Q  250 atattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattcaac 299  Q
    |||||||||| || ||| ||||| || |||||||||||||||||||||||    
T  30122619 atattttaacgtcctaatcatgcatggaaaaaatcatgaaaaaattcaac 30122570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 31516000 - 31516069
Alignment:
Q  20 aattttgtacattttgattgaataatcaaaataaattgatgcttctttaaaattctataaaactttgcat 89  Q
    |||||||||||||||| ||||| ||| ||||||||||||  | | ||  ||||||||| |||||||||||    
T  31516000 aattttgtacattttgcttgaaaaattaaaataaattgagtcgttttcgaaattctatgaaactttgcat 31516069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 299
Target Start/End: Complemental strand, 33041391 - 33041286
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    |||||||||||||||||| || || | || | || | ||||||| | || |||| ||||||||||| | |||| ||||  || ||||||| |||||||||    
T  33041391 aaaattcataattaatttatctctggtcgaagaaatttaattttttatgtaaagctatattttaacgtgttaatcatgtatgaaaaaaataatgaaaaaa 33041292  T
Q  294 ttcaac 299  Q
    ||||||    
T  33041291 ttcaac 33041286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 16094706 - 16094646
Alignment:
Q  28 acattttgattgaataatcaaaataaattgatgcttctttaaaattctataaaactttgca 88  Q
    |||||||| ||||| ||| ||||||||||||  ||||||| |||| ||| |||||||||||    
T  16094706 acattttggttgaaaaataaaaataaattgaaacttctttgaaatgctacaaaactttgca 16094646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 43002725 - 43002769
Alignment:
Q  252 attttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaattc 296  Q
    ||||||||||| ||||||||| || |||||||||| |||||||||    
T  43002725 attttaacatcataaacatgcatgcaaaaaatcataaaaaaattc 43002769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 34236511 - 34236404
Alignment:
Q  194 aaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaaa 293  Q
    ||||||||||||||||| ||| ||   |  ||| || ||||||||  |||||| | ||||||||||||| ||||||||| |  ||||||| |||||||||    
T  34236511 aaaattcataattaattcgtctctactcagaaatttttaattttacatgaaaaatcatattttaacatcataaacatgcctacaaaaaattatgaaaaaa 34236412  T
Q  294 ttcaacct 301  Q
    ||| ||||    
T  34236411 ttccacct 34236404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 15034721 - 15034827
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtgtaaaaaatcatgaaaaa 292  Q
    ||||||||||||||||||||| ||||| |  ||| || |||||||||||  |||||  ||||||||  || |||| |||  |  ||||||| ||||||||    
T  15034721 aaaaattcataattaatttgttccttgtcaaaaagttataattttatgttgaaagtggtattttaatgtcctaaatatgtctacaaaaaattatgaaaaa 15034820  T
Q  293 attcaac 299  Q
    |||||||    
T  15034821 attcaac 15034827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 32279756 - 32279826
Alignment:
Q  224 aaaattctaattttatgtgaaaagttatattttaacatcttaaacatgcgtg-taaaaaatcatgaaaaaa 293  Q
    |||||| |||||||||||| |||||| ||||||||| || ||||||| | ||  |||||||||||||||||    
T  32279756 aaaattataattttatgtggaaagttgtattttaacgtcctaaacatacctgcaaaaaaatcatgaaaaaa 32279826  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 26875319 - 26875250
Alignment:
Q  47 aaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatgt 116  Q
    ||||||||||||  |||||||||||| |||| ||||||||||| |   |||||| |||||||||| ||||    
T  26875319 aaaataaattgagacttctttaaaatgctatgaaactttgcatatctcttctatttatttttatagatgt 26875250  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 27023099 - 27023035
Alignment:
Q  43 aatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttt 107  Q
    |||||||||||||| | ||||||||| ||| || | ||||||| || |||| |||||||||||||    
T  27023099 aatcaaaataaattaaggcttctttagaatgctctgaaactttccaacttccttctatgtatttt 27023035  T

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Target: scaffold0515 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 10958 - 11007
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtg 242  Q
    ||||||||||| ||||||||||||| | || |||||||||||||| ||||    
T  10958 aaaaattcatatttaatttgtccctcgtcggaaaattctaattttttgtg 11007  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 18528 - 18577
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtg 242  Q
    ||||||||||| ||||||||||||| | || |||||||||||||| ||||    
T  18528 aaaaattcatatttaatttgtccctcgtcggaaaattctaattttttgtg 18577  T

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Target: scaffold0152; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 37354 - 37403
Alignment:
Q  193 aaaaattcataattaatttgtcccttgacgcaaaattctaattttatgtg 242  Q
    ||||||||||| ||||||||||||| | || |||||||||||||| ||||    
T  37354 aaaaattcatatttaatttgtccctcgtcggaaaattctaattttttgtg 37403  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 2017 - 1876
Alignment:
Q  20 aattttgtacattttgattgaataatcaaaataaattgatgcttctttaaaattctataaaactttgcatcttcattctatgtatttttatatatgtcta 119  Q
    |||||||  ||||||| ||||| || ||||||||||||| |  ||||  ||||||||| ||| ||  ||| | | || ||| |||||||||| ||||||     
T  2017 aattttgcgcattttggttgaaaaaacaaaataaattgaggagtcttcgaaattctatgaaagttcacatatcctttttatctatttttatagatgtctt 1918  T
Q  120 tctaaacaatcatctcgaaatt-gatttctaggttaagattt 160  Q
    |  ||||||||| ||||||||| |||||| ||||||| ||||    
T  1917 tgcaaacaatcacctcgaaattcgatttcaaggttaaaattt 1876  T

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