View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21207_high_13 (Length: 334)
Name: NF21207_high_13
Description: NF21207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21207_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 17 - 321
Target Start/End: Complemental strand, 1410036 - 1409732
Alignment:
| Q |
17 |
aatttctccacttgctctcaccagtaacttcaactacagtctgtctttctcatgaaaagaccctcccaactccctccacaataggggtgtaacatttttg |
116 |
Q |
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| T |
1410036 |
aatttctccacttgctctcaccagtaacttcaactacagtctgtctttctcatgaaaagaccctcccaactccctccacaataggggtgtaacatttttg |
1409937 |
T |
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| Q |
117 |
catcctcttttgccctctttcctttctttactataacattttttgtgttgttcctctgactcaatacaattcttagcacaaaagaggctgtatccaaaaa |
216 |
Q |
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| T |
1409936 |
catcctcttttgccctctttcctttctttactataacattttttgtgttgttcctctgactcaatacaattcttagcacaaaagagtctgtatccaaaaa |
1409837 |
T |
|
| Q |
217 |
gtgaagtagattttaaataacaaattaaaatgatctcatttcgtccatccataaatacacgtgcgcttaattttatgtagggattcttagaaataacatt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
1409836 |
gtgaagtagattttaaataacaaattaaaatgatctcatttcgtccatccataaatacacgtgcgcttaattttatctagggattcttagaaataacatt |
1409737 |
T |
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| Q |
317 |
tagta |
321 |
Q |
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||||| |
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| T |
1409736 |
tagta |
1409732 |
T |
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