View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21207_high_15 (Length: 303)
Name: NF21207_high_15
Description: NF21207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21207_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 290
Target Start/End: Original strand, 34953303 - 34953573
Alignment:
| Q |
20 |
tggagaaggtgttttgaattcagccatggcttaacaagcaccactgaatcaaacattgttggatctccaacaccatcactcttcgcttgtgtaacccata |
119 |
Q |
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| T |
34953303 |
tggagaaggtgttttgaattcagccatggcttaacaagcaccactgaatcaaacattgttggatctccaacaccatcactcttcgcttgtgtaacccata |
34953402 |
T |
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| Q |
120 |
tcttcatatagtatttgatcccagaaactacttgttgttgcgcctccaccacttcaacaaaccttaactctccttccccttccttccatatcttcacact |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34953403 |
tcttcatatagtatttgatcccagaaactacttgttgttgcgcctccaccacttccacaaaccttaactctccttccccttccttccatatcttcacact |
34953502 |
T |
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| Q |
220 |
ccggttatactcctccaccgcaaatcttcccagttcttgcacctcgtcgtttgttctcacgtttgcaacct |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34953503 |
ccggttatactcctccaccgcaaatcttcccagttcttgcacctcgtcgtttgttctcacgtttgcaacct |
34953573 |
T |
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