View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21207_high_20 (Length: 268)

Name: NF21207_high_20
Description: NF21207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21207_high_20
NF21207_high_20
[»] chr1 (16 HSPs)
chr1 (1-216)||(13129722-13129937)
chr1 (1-216)||(13094293-13094508)
chr1 (1-216)||(13161415-13161630)
chr1 (1-216)||(13070259-13070474)
chr1 (1-216)||(30368191-30368406)
chr1 (12-216)||(13204364-13204568)
chr1 (1-216)||(13100895-13101109)
chr1 (2-216)||(13007095-13007309)
chr1 (1-215)||(13244605-13244819)
chr1 (1-215)||(12963959-12964173)
chr1 (1-215)||(13271480-13271694)
chr1 (44-215)||(13065297-13065468)
chr1 (1-215)||(19279252-19279466)
chr1 (1-215)||(13080949-13081163)
chr1 (1-215)||(13086001-13086215)
chr1 (1-73)||(13010667-13010739)
[»] chr6 (5 HSPs)
chr6 (45-117)||(31380253-31380325)
chr6 (145-197)||(377572-377624)
chr6 (218-256)||(31376654-31376692)
chr6 (112-197)||(346845-346930)
chr6 (112-197)||(355504-355589)
[»] chr7 (1 HSPs)
chr7 (154-199)||(12164320-12164365)
[»] chr4 (1 HSPs)
chr4 (112-199)||(3321647-3321734)


Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13129722 - 13129937
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13129722 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 13129821  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13129822 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttg 13129921  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13129922 ttccatccttcccata 13129937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13094293 - 13094508
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13094293 tccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaatatctttacctatacaaattctgggtcctgtgt 13094392  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13094393 tgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttg 13094492  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13094493 ttccatccttcccata 13094508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13161415 - 13161630
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13161415 tccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 13161514  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||    
T  13161515 tgaaagatatgaacttgtaagaaggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttccccccatagttg 13161614  T
Q  201 ttccattcttcccata 216  Q
    |||||| || ||||||    
T  13161615 ttccatcctgcccata 13161630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13070474 - 13070259
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| || ||||| |    
T  13070474 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctcggacctgtat 13070375  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| ||||||||||||||| ||||||||||| | |||  |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  13070374 tgaaagctatgaacttgtaagatggaacatgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttg 13070275  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13070274 ttccatccttcccata 13070259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 30368406 - 30368191
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||| ||||||||||||||||||  |||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||| |||| |||||||| |    
T  30368406 tccacgacctgtatgtgaaacttccataacaaggcagctgcaaccatcttcatttgaacgaaactaagatctttacccatacaacttctaggtcctgtat 30368307  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| ||||||||||||||||||||||||||| | ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||     
T  30368306 tgaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgatacccatctctcaggcttaaattccatgcaatcttctccccatatttt 30368207  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  30368206 ttccatccttcccata 30368191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 13204364 - 13204568
Alignment:
Q  12 tatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacg 111  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| || ||||| |||||||||| |    
T  13204364 tatgtgaaaattctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctaggacctgtattgaaagctatg 13204463  T
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttgttccattcttc 211  Q
    |||||||||||||||||||||||||| | |||  |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  13204464 aacttgtaagatggtacatgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttc 13204563  T
Q  212 ccata 216  Q
    |||||    
T  13204564 ccata 13204568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13100895 - 13101109
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||| |||| |||||||  |    
T  13100895 tccaccacctgtatgtgaaacttcggtaacaaagcagctgcgaccatcttcatttgaatgaagctaatatccttacccatacaacttctaggtcctga-t 13100993  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| ||||||||||||||||||||||||||| | ||| ||||| || | ||||||||||||||||||||||||||| |||||||||||||||||    
T  13100994 tgaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttg 13101093  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13101094 ttccatccttcccata 13101109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 13007095 - 13007309
Alignment:
Q  2 ccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgtt 101  Q
    ||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||| |||| ||| || || |||||| |||| || ||||| ||    
T  13007095 ccaccacctttatgtgaaactttggtaacaaagctgctgcgaccatcttcatttgaatgaagctaatatccttgcccatacaacttctaggacctgtatt 13007194  T
Q  102 gaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttgt 201  Q
    |||||||| ||||||||||||||||||||||||||| | ||| ||||| || | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  13007195 gaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttgt 13007294  T
Q  202 tccattcttcccata 216  Q
    ||||| |||||||||    
T  13007295 tccatccttcccata 13007309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13244819 - 13244605
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||||||| ||||||||  |||||||| |||||| ||||| |||||||||| ||| ||||||||||| || |||||| |||| || ||||  |    
T  13244819 tccaccacctgtatgcgaaacttccataacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcat 13244720  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| |||||||||||| ||||||| ||||||  |||| ||  | ||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  13244719 tgaaagctatgaacttgtaagacggtacatttataatccctcctctagctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttg 13244620  T
Q  201 ttccattcttcccat 215  Q
    || ||| ||||||||    
T  13244619 ttgcatccttcccat 13244605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12964173 - 12963959
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||| | |||||||||||||   |||| |  ||| || ||||| ||||||||||  || |||| |||||| || |||||| |||| || ||||  |    
T  12964173 tccaccacttctatgtgaaacttccacaacacattagcagcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcat 12964074  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||| |||| |||||| |||||||| || |||||||| ||||| || |  ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  12964073 tgaatgctatgaacttataagatggcacttgtataatttctcctctatttgatatccatctttcaggcttaaattccaagcaatcttctccccatatttg 12963974  T
Q  201 ttccattcttcccat 215  Q
    |||||| ||||||||    
T  12963973 ttccatccttcccat 12963959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 13271480 - 13271694
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||| |||||||||||||||  ||| | || |||||| ||||| ||||||||||| || |||| |||||| || | |||  |||| || ||||  |    
T  13271480 tccaccacatgtatgtgaaacttccataatacagaagctgcaaccattttcatttgaataaagctaatatctttcccaagacagcttctaggacctgcat 13271579  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||| |||| ||||||||||||||||||||||||||| | |||  | || ||||||||||||||||||||||| |||| ||||||  | |||||||  ||    
T  13271580 tgaatgctatgaacttgtaagatggtacatgtataatttgtcctttatctgatatccatctctcaggcttaaactccaagcaatcaccaccccatacatg 13271679  T
Q  201 ttccattcttcccat 215  Q
    |||||||||||||||    
T  13271680 ttccattcttcccat 13271694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 13065468 - 13065297
Alignment:
Q  44 ccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttgtaagatggtacatgtataatatctcc 143  Q
    |||||||||||| || |||  | | ||||||||| | |||| |||| || ||||  |||||||||| |||||||||||| |||||||||||||| | |||    
T  13065468 ccatcttcatttcaacgaaggtgatatctttacccaaacaacttcttggccctgcattgaaagctatgaacttgtaagacggtacatgtataatttgtcc 13065369  T
Q  144 cctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttgttccattcttcccat 215  Q
     || |  |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  13065368 gctttttgatatccatctctcaggcttaaattccatgcagtcttctccccatattttctccatccttcccat 13065297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 19279466 - 19279252
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||| ||||||||| ||||||||  ||| | ||||||||| ||||| |||||||||| |||| ||| |||||| || | |||  |||| || ||||  |    
T  19279466 tccacgacctgtatgcgaaacttccataatacagcagctgcaaccattttcatttgaaggaaagtaatatcttttccgagacagcttctcggacctgcat 19279367  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    | || |||| ||||||||| ||||||||||||||||| | ||| || || ||||||||||||||||||  |||||| | |||||| || |||||||||||    
T  19279366 taaacgctatgaacttgtacgatggtacatgtataatttgtcctctatccgatatccatctctcaggccgaaattctaggcaatcatcaccccatatttg 19279267  T
Q  201 ttccattcttcccat 215  Q
    |||||| ||||||||    
T  19279266 ttccatccttcccat 19279252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13081163 - 13080949
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||| |||||||||||   ||| |  |||||||| ||||| ||||||||||  ||||||| |||||| || | |||  |||| || ||||  |    
T  13081163 tccaccacctgaatgtgaaacttaaataaaactgcagctgcaaccattttcatttgaagaaaactaatatctttcccaagacagcttcttggacctgcat 13081064  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    | || |||| |||||| ||||| || || |||||||| | ||| || || ||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  13081063 taaacgctatgaacttataagacggcacttgtataatttgtcctctatctgatatccatctctcaggcttaaactccaagcaatcctctccccatatttg 13080964  T
Q  201 ttccattcttcccat 215  Q
     ||||| ||||||||    
T  13080963 ctccatccttcccat 13080949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 13086001 - 13086215
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||| || |||||||||||||||  ||||| ||||||||| ||||| ||||||||||  |  |||| |||||| || | |||| |||  || ||||  |    
T  13086001 tccacaacttgtatgtgaaacttccataacatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcat 13086100  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    | || |||| ||||||| ||||||||||||| | ||||| |||  | || |||||||||||||| ||||||||||| | || ||| |  |||||||||||    
T  13086101 taaatgctatgaacttgcaagatggtacatgcaaaatatgtcctttatctgatatccatctctcgggcttaaattcgaagcgatccttaccccatatttg 13086200  T
Q  201 ttccattcttcccat 215  Q
    || ||| ||||||||    
T  13086201 tttcatccttcccat 13086215  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13010667 - 13010739
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctt 73  Q
    |||||||| |||||| |||| |||  ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  13010667 tccaccacttgtatgcgaaatttccataacaaatcagctgcgaccatcttcattagaatgaaactaagatctt 13010739  T

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Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 31380325 - 31380253
Alignment:
Q  45 catcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttg 117  Q
    |||||| |||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||| || |||||||    
T  31380325 catcttaatttgaatgaaactaagatctttaccaatacaacttccgggtcctgtattgaaagatatgaacttg 31380253  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 377624 - 377572
Alignment:
Q  145 ctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatat 197  Q
    |||||||||||||||||||| ||||| || |||| ||||||||||||||||||    
T  377624 ctctcagatatccatctctctggcttgaactccaagcaatcttctccccatat 377572  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 31376654 - 31376692
Alignment:
Q  218 atgacctttcaaaactaaggtgacatggttgttgaaatt 256  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31376654 atgacctttcaaaactaaggtgacatggttattgaaatt 31376692  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 346845 - 346930
Alignment:
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatat 197  Q
    |||||||||||||||  ||| | |||  |||| |||||||||||||||||||| ||||| || ||||  ||||||| |||||||||    
T  346845 aacttgtaagatggtgtatgaacaatgcctcctctctcagatatccatctctctggcttgaactccaaacaatcttttccccatat 346930  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 355504 - 355589
Alignment:
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatat 197  Q
    |||||||||||||||  ||| | |||  |||| |||||||||||||||||||| ||||| || ||||  ||||||| |||||||||    
T  355504 aacttgtaagatggtgtatgaacaatgcctcctctctcagatatccatctctctggcttgaactccaaacaatcttttccccatat 355589  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 12164320 - 12164365
Alignment:
Q  154 atccatctctcaggcttaaattccatgcaatcttctccccatattt 199  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  12164320 atccacctctctggcttaaattccaagcaatcttctccccatattt 12164365  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 3321734 - 3321647
Alignment:
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatattt 199  Q
    ||||||||||| |||||||| || || |||||  ||| ||| ||||| ||||| || ||||| |||| ||||||||||||||| ||||    
T  3321734 aacttgtaagaaggtacatgaattatttctcctttcttagaaatccacctctctggtttaaactccaagcaatcttctccccaaattt 3321647  T

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