View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21207_high_9 (Length: 365)

Name: NF21207_high_9
Description: NF21207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21207_high_9
NF21207_high_9
[»] chr6 (6 HSPs)
chr6 (1-360)||(26854055-26854414)
chr6 (176-247)||(24062813-24062884)
chr6 (176-246)||(33573668-33573738)
chr6 (175-251)||(13698490-13698566)
chr6 (176-244)||(28592866-28592934)
chr6 (176-247)||(9894219-9894290)
[»] chr1 (14 HSPs)
chr1 (176-248)||(37705630-37705702)
chr1 (176-246)||(47402437-47402507)
chr1 (180-253)||(9398168-9398240)
chr1 (177-246)||(34749026-34749094)
chr1 (176-232)||(5965559-5965615)
chr1 (179-246)||(650120-650187)
chr1 (175-246)||(1580999-1581070)
chr1 (176-243)||(34011016-34011083)
chr1 (177-247)||(44645080-44645150)
chr1 (177-247)||(44648438-44648508)
chr1 (176-249)||(10729219-10729292)
chr1 (176-248)||(8273491-8273563)
chr1 (176-212)||(20906970-20907006)
chr1 (162-206)||(52043568-52043612)
[»] chr7 (19 HSPs)
chr7 (176-246)||(27513150-27513220)
chr7 (176-247)||(10040607-10040678)
chr7 (176-248)||(15646928-15647000)
chr7 (176-246)||(5800451-5800521)
chr7 (176-246)||(20149272-20149342)
chr7 (162-246)||(35213746-35213830)
chr7 (176-247)||(2474852-2474923)
chr7 (176-247)||(19492076-19492147)
chr7 (175-246)||(21080021-21080092)
chr7 (187-246)||(39465675-39465734)
chr7 (176-253)||(8036360-8036437)
chr7 (176-249)||(10199447-10199520)
chr7 (176-249)||(23160799-23160872)
chr7 (176-244)||(1787158-1787226)
chr7 (176-236)||(9412898-9412958)
chr7 (176-248)||(31176895-31176966)
chr7 (195-247)||(38174896-38174948)
chr7 (176-228)||(39435174-39435226)
chr7 (175-243)||(39466039-39466107)
[»] chr2 (19 HSPs)
chr2 (176-246)||(21885130-21885200)
chr2 (176-246)||(34753406-34753476)
chr2 (158-246)||(25915017-25915105)
chr2 (176-246)||(13450355-13450425)
chr2 (176-246)||(9191964-9192034)
chr2 (190-248)||(33133800-33133858)
chr2 (176-248)||(1397275-1397347)
chr2 (175-251)||(13594052-13594128)
chr2 (176-248)||(33134329-33134401)
chr2 (176-248)||(36817310-36817382)
chr2 (179-246)||(18746251-18746318)
chr2 (189-248)||(35125740-35125799)
chr2 (176-246)||(8875261-8875331)
chr2 (176-246)||(9169952-9170022)
chr2 (176-246)||(19134063-19134133)
chr2 (162-207)||(7886174-7886219)
chr2 (176-248)||(15265774-15265846)
chr2 (178-246)||(24004381-24004449)
chr2 (176-248)||(39997275-39997347)
[»] chr4 (11 HSPs)
chr4 (176-240)||(20702726-20702790)
chr4 (176-248)||(17702363-17702435)
chr4 (176-247)||(1363929-1364000)
chr4 (176-247)||(35519274-35519345)
chr4 (176-246)||(5190634-5190704)
chr4 (176-246)||(2290849-2290919)
chr4 (176-246)||(7438047-7438117)
chr4 (176-246)||(37013096-37013165)
chr4 (177-247)||(38720804-38720874)
chr4 (175-240)||(37831137-37831202)
chr4 (190-246)||(44277093-44277149)
[»] scaffold0707 (1 HSPs)
scaffold0707 (176-246)||(169-239)
[»] scaffold0068 (1 HSPs)
scaffold0068 (176-246)||(57415-57485)
[»] chr8 (13 HSPs)
chr8 (176-246)||(5918840-5918910)
chr8 (175-246)||(15898968-15899039)
chr8 (176-246)||(15044083-15044152)
chr8 (186-251)||(11352970-11353035)
chr8 (176-249)||(35451035-35451108)
chr8 (194-246)||(23085650-23085702)
chr8 (176-244)||(38804458-38804526)
chr8 (176-243)||(18994542-18994609)
chr8 (182-247)||(9280383-9280449)
chr8 (158-248)||(27275432-27275522)
chr8 (162-239)||(288964-289041)
chr8 (177-246)||(19367853-19367922)
chr8 (175-207)||(11938016-11938048)
[»] chr5 (5 HSPs)
chr5 (175-244)||(1611812-1611881)
chr5 (176-244)||(8990556-8990624)
chr5 (176-247)||(43370381-43370452)
chr5 (176-241)||(24836953-24837018)
chr5 (176-208)||(9514968-9515000)
[»] scaffold0014 (1 HSPs)
scaffold0014 (175-247)||(21086-21158)
[»] chr3 (13 HSPs)
chr3 (176-247)||(18461102-18461173)
chr3 (176-247)||(22258405-22258476)
chr3 (176-246)||(5811917-5811987)
chr3 (176-246)||(22102620-22102690)
chr3 (178-248)||(49758211-49758281)
chr3 (176-245)||(21091777-21091846)
chr3 (162-248)||(7777752-7777839)
chr3 (176-247)||(18386715-18386785)
chr3 (175-246)||(18388580-18388651)
chr3 (181-247)||(5530819-5530885)
chr3 (176-246)||(21824221-21824291)
chr3 (176-248)||(265166-265238)
chr3 (196-248)||(14771073-14771124)
[»] scaffold0092 (1 HSPs)
scaffold0092 (175-246)||(24100-24171)
[»] scaffold0268 (1 HSPs)
scaffold0268 (176-249)||(21411-21484)
[»] scaffold0330 (1 HSPs)
scaffold0330 (176-240)||(18686-18750)
[»] scaffold0240 (1 HSPs)
scaffold0240 (176-240)||(2704-2768)


Alignment Details
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 26854414 - 26854055
Alignment:
Q  1 gggagtacggtaagtgtaaaggtgaatgagttttatttttggttcggtaaatgtaaaggtttagccactaggaagagtgatattaggcgcaatggtagca 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  26854414 gggagtacggtaagtgtaaaggttaatgatttttatttttggtacggttaatgtaaaggttttgccattaggaagagtgatattaggcgcaatggtagca 26854315  T
Q  101 accaaatcataattttaggcgcaattgtaagtgtaaaggttttgccgttaggaagagtcataaaaaatacaatctataattttcatacgttagcgcaata 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26854314 accaaatcctaattttaggcgcaattgtaagtgtaaaggttttgccgttaggaagagtcataaaaaatacaatttataattttcatacgttagcgcaata 26854215  T
Q  201 aaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaataattaatcactttatttgagaaatggaatatcacgtcattgaacagagat 300  Q
    ||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26854214 aaaagagcagaatgacgggcaagtgggtgcccgtcttttcgctagttaataattaatcactttatttgagaaatggaatatcacgtcattgaacagagat 26854115  T
Q  301 tgtggctaaacttgtatttctaaaagcaaattaatcatacatatatgtgtctctgctcct 360  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  26854114 tgtggctaaacttgtatttctaaaaggaaattaatcatacatatatgtgtttctgctcct 26854055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 24062813 - 24062884
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| |||| ||||||||||||||||  |||  ||||| | |||||||||||||||||||||||||    
T  24062813 ataattttcaaacgtcagcgcaataaaaagagcggaaaaacgggcacgtgagtgcccgtcttttcgctagtt 24062884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 33573668 - 33573738
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| |||||||||||| ||||||||   || ||||||||  |||||||||||||||||||||||    
T  33573668 ataattttcaaacgttagcgcaaaaaaaagagcgaaaagacgggtacttgagtgcccgtcttttcgctagt 33573738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 13698490 - 13698566
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaata 251  Q
    ||||||||||| | |||||||||| ||||||||  | | |||||| | |||||||||||||||||| ||||| ||||    
T  13698490 tataattttcaaatgttagcgcaacaaaaagagtggcaagacgggcacgtgagtgcccgtcttttccctagtaaata 13698566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 28592866 - 28592934
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 244  Q
    ||||||||||  | ||||||||||||||||||  ||| |||||||| || | |||||||||||||||||    
T  28592866 ataattttcaaccattagcgcaataaaaagagcggaaagacgggtacgtaaatgcccgtcttttcgcta 28592934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 9894290 - 9894219
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| ||||||| |||||||||||||   || |||||| | |||||||||  ||||||||||||||    
T  9894290 ataattttcaaacgttagtgcaataaaaagagtgaaaagacgggaatgtgagtgcctatcttttcgctagtt 9894219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 37705702 - 37705630
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| ||||||||||||||||||||| |||| ||| | || ||||||||||||||||||||||||||    
T  37705702 ataattttcaaacgttagcgcaataaaaagagcagaaagacagatatgtgagtgcccgtcttttcgctagtta 37705630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 47402507 - 47402437
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| |||||| ||||||||||||||  ||| ||| || | || |||||||||||||||||||||    
T  47402507 ataattttcaaacgttaccgcaataaaaagagtggaaagacaggcacgtaagtgcccgtcttttcgctagt 47402437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 9398168 - 9398240
Alignment:
Q  180 ttttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaataat 253  Q
    |||||| || |||||||| |||||||||  ||| |||||| | |||||||||||||||||||||| ||||||||    
T  9398168 ttttcaaaccttagcgcattaaaaagagtggaaagacgggcacgtgagtgcccgtcttttcgcta-ttaataat 9398240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 34749026 - 34749094
Alignment:
Q  177 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||| |||||||||||||||||||||  ||| |||||| | ||||||| |||||||||| |||||    
T  34749026 taattttcaaacgttagcgcaataaaaagagtggaaagacgggcatgtgagtg-ccgtcttttcactagt 34749094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 5965615 - 5965559
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgccc 232  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||    
T  5965615 ataattttcaaacgttagagcaataaaaagagcagaaagacgggcacgtgagtgccc 5965559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 650187 - 650120
Alignment:
Q  179 attttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||| | |||||||||||||||||||  ||| |||||| |  ||||||||||||||| |||||||    
T  650187 attttcaaatgttagcgcaataaaaagagcggaaagacgggcacatgagtgcccgtctttgcgctagt 650120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 1581070 - 1580999
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||||| || ||||||||||||||||||  ||| |||||  |  |||||| ||||||||||||||||    
T  1581070 tataattttcaaactttagcgcaataaaaagagcggaaagacggacacctgagtgtccgtcttttcgctagt 1580999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 34011083 - 34011016
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgct 243  Q
    |||||||||| ||||||| |||||||||||||  ||| |||||| | |||| |||| |||||||||||    
T  34011083 ataattttcaaacgttagtgcaataaaaagagcggaaagacgggcacgtgactgcctgtcttttcgct 34011016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 44645080 - 44645150
Alignment:
Q  177 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    ||||||||| |||||||| ||||||||||||  ||| |||||  | ||||| |||| ||||||||||||||    
T  44645080 taattttcaaacgttagcacaataaaaagaggggaaagacggacatgtgagggcccatcttttcgctagtt 44645150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 44648438 - 44648508
Alignment:
Q  177 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    ||||||||| |||||||| ||||||||||||  ||| |||||  | |||||||||  ||||||||||||||    
T  44648438 taattttcaaacgttagcacaataaaaagagcggaaagacggacatgtgagtgcctatcttttcgctagtt 44648508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 10729292 - 10729219
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 249  Q
    ||||||| || |||||||||||||||||||||  ||| |||| | | |||| | | ||||||||||||||||||    
T  10729292 ataatttccaaacgttagcgcaataaaaagagcggaaagacgtgcacgtgattacacgtcttttcgctagttaa 10729219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 8273491 - 8273563
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    ||||||| || |||||||| || |||||||||| ||| |||| | | |||||||| ||| |||||||||||||    
T  8273491 ataatttacacacgttagcacagtaaaaagagaggaaagacgagcacgtgagtgctcgtattttcgctagtta 8273563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 20906970 - 20907006
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaa 212  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  20906970 ataattttcaaacgttagcgcaataaaaagagcagaa 20907006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 52043568 - 52043612
Alignment:
Q  162 aaaaaatacaatctataattttcatacgttagcgcaataaaaaga 206  Q
    |||||||||  | ||||||||||| ||||||||||||||||||||    
T  52043568 aaaaaatactgtttataattttcaaacgttagcgcaataaaaaga 52043612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 27513220 - 27513150
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| || ||||||||||||||| ||||||| |||||  | ||||||||||||||||||||||||    
T  27513220 ataattttcaaactttagcgcaataaaaatagaagaaagacggacacgtgagtgcccgtcttttcgctagt 27513150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 10040607 - 10040678
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| | ||||||||||||||||||| |||| |||||| | ||| ||| |||||||||||||||||    
T  10040607 ataattttcaaatgttagcgcaataaaaagagcagaaagacgggcacgtgggtggccgtcttttcgctagtt 10040678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 15647000 - 15646928
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| |||||||||||||||||||||  ||| |||||| | |||||||| |||||||| ||| ||||    
T  15647000 ataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagtgctcgtctttttgctggtta 15646928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 5800451 - 5800521
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| || ||||||||||||||||||  ||| |||||  | ||||||| ||||||||||||||||    
T  5800451 ataattttcaaacattagcgcaataaaaagagcggaaagacggacacgtgagtgtccgtcttttcgctagt 5800521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 20149342 - 20149272
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| ||||||| || ||||||||||  ||| ||||||||  |||||| ||||||||||||||||    
T  20149342 ataattttcaaacgttagtgcgataaaaagagtggaaagacgggtacatgagtgtccgtcttttcgctagt 20149272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 35213830 - 35213746
Alignment:
Q  162 aaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||| || |||||| |||| | ||||||||||| |||||||| ||| |||||  |  |||||||||||||||| ||||||    
T  35213830 aaaaaataccatttataatattcaaatgttagcgcaattaaaagagaggaaagacggacatatgagtgcccgtctttttgctagt 35213746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 2474923 - 2474852
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| ||||||||||| |||||||||  ||| || | | | ||||||||||||||||| |||||||    
T  2474923 ataattttcaaacgttagcgcagtaaaaagagcggaaagatgagcacgtgagtgcccgtcttttggctagtt 2474852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 19492076 - 19492147
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| ||||| | |||||||||||||  ||| ||| |  | |||||||||||||||||||||||||    
T  19492076 ataattttcaaacgttggtgcaataaaaagagcggaaagacagacatgtgagtgcccgtcttttcgctagtt 19492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 21080092 - 21080021
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||||| || |||||| ||||||||||| |||| |||||  | || ||||||| |||||||||||||    
T  21080092 tataattttcaaactttagcgtaataaaaagagtagaaagacggacacgtaagtgcccatcttttcgctagt 21080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 39465734 - 39465675
Alignment:
Q  187 acgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||| ||||||||||||| |||| |||| | | ||||||| ||||||||||||||||    
T  39465734 acgttagtgcaataaaaagagtagaaagacgagcacgtgagtgtccgtcttttcgctagt 39465675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 8036437 - 8036360
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaataat 253  Q
    |||||||||| |||||| || ||||||||||| |||| ||| |  | |||||||| ||||||||||||| | ||||||    
T  8036437 ataattttcaaacgttaacgtaataaaaagagcagaaagacagacacgtgagtgcacgtcttttcgctaatcaataat 8036360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 10199520 - 10199447
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 249  Q
    |||||||||| || ||||||||||||||||||  ||| |||||| |  ||| ||||| |||||| |||||||||    
T  10199520 ataattttcaaactttagcgcaataaaaagagcggaaagacgggcacatgaatgcccatctttttgctagttaa 10199447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 23160872 - 23160799
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 249  Q
    |||||||||| ||||| |||||||  ||| || |||| |||||  | ||||| |||||||||||||||||||||    
T  23160872 ataattttcaaacgtttgcgcaatcgaaatagcagaaagacggacacgtgagggcccgtcttttcgctagttaa 23160799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 1787158 - 1787226
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 244  Q
    |||||||||| |||||| |||||| |||||||  ||| |||||  | ||||||| ||||||||||||||    
T  1787158 ataattttcaaacgttaacgcaattaaaagagcggaaagacggacacgtgagtgtccgtcttttcgcta 1787226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 9412898 - 9412958
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtct 236  Q
    |||||||||| ||| ||||||||||||||||| |||| ||||   | ||||||||||||||    
T  9412898 ataattttcaaacgatagcgcaataaaaagagcagaaagacgaccacgtgagtgcccgtct 9412958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 31176895 - 31176966
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| ||||||||| ||||||||||| | || |||||| |  | |||||||||||||| ||||||||    
T  31176895 ataattttcaaacgttagcgtaataaaaagagtaaaaagacgggcacat-agtgcccgtctttttgctagtta 31176966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 38174948 - 38174896
Alignment:
Q  195 gcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    ||||||||||||| |||| |||||  | ||| |||||||||||||||||||||    
T  38174948 gcaataaaaagagtagaaagacggacacgtgtgtgcccgtcttttcgctagtt 38174896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 39435174 - 39435226
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagt 228  Q
    |||||||||| |||||||||||||||||||||  ||| |||||| | ||||||    
T  39435174 ataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagt 39435226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 39466039 - 39466107
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgct 243  Q
    ||||||||||| | |||| |||||||||||||| |||| |||||| |  |||||| | |||||||||||    
T  39466039 tataattttcaaaagttaacgcaataaaaagagcagaaagacgggcacatgagtgtctgtcttttcgct 39466107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 21885200 - 21885130
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||| | |||||||||| |||||||||||||    
T  21885200 ataattttcaaacgttagagcaataaaaagagcagaaagacgggcacgtgagtgcccatcttttcgctagt 21885130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 34753406 - 34753476
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| || |||||| ||||||||||| |||| |||||| | ||||||||||||||||||||||||    
T  34753406 ataattttcaaacattagcgtaataaaaagagcagaaagacgggcacgtgagtgcccgtcttttcgctagt 34753476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 246
Target Start/End: Complemental strand, 25915105 - 25915017
Alignment:
Q  158 tcataaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| ||  | ||||||||||| ||||||||||||||| ||||| |||| |||  | | ||||||||||||||||||||||||    
T  25915105 tcataaaaaacaccgtttataattttcaaacgttagcgcaataataagagcagaaagacaagcacgtgagtgcccgtcttttcgctagt 25915017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 13450355 - 13450425
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| || ||||||||||||||||||  ||| |||||| | |||||| |||||||||||||||||    
T  13450355 ataattttcaaacattagcgcaataaaaagagcggaaagacgggcacgtgagtacccgtcttttcgctagt 13450425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 9192034 - 9191964
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| ||||||||||||||||| |||   || |||||| | ||||||| ||||||||||||||||    
T  9192034 ataattttcaaacgttagcgcaataaaatgagccaaaagacgggcacgtgagtggccgtcttttcgctagt 9191964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 33133858 - 33133800
Alignment:
Q  190 ttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    ||||||||||||||||||  ||| |||||| | |||||||| |||||||||||||||||    
T  33133858 ttagcgcaataaaaagagcggaaagacgggcacgtgagtgctcgtcttttcgctagtta 33133800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 1397275 - 1397347
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||| | | ||||||| |||||||||||  ||| |||||||| ||| |||||| |||||||||||||||    
T  1397275 ataattttaaaaggttagcgtaataaaaagagtggaatgacgggtacgtgggtgcccatcttttcgctagtta 1397347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 13594128 - 13594052
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaata 251  Q
    ||||||||||| |||||||||||||||||||||  ||| |||| ||| || |||| || |||||||| |||| ||||    
T  13594128 tataattttcaaacgttagcgcaataaaaagagcggaaagacgtgtacgtaagtgtccatcttttcgttagtaaata 13594052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 33134401 - 33134329
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| || ||||||||||||||||||  ||| |||||  | ||||||  ||||||||||||||||||    
T  33134401 ataattttcaaacattagcgcaataaaaagagtggaaagacggacatgtgagtatccgtcttttcgctagtta 33134329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 36817382 - 36817310
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| |||||||||||||||||| ||  |||  ||||||| ||||||| || |||||||| ||||||    
T  36817382 ataattttcaaacgttagcgcaataaaaaaagtggaaaaacgggtacgtgagtgtccatcttttcggtagtta 36817310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 18746251 - 18746318
Alignment:
Q  179 attttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||| || |||||||||||||||||| |||| |||||| |  ||||||| |||||||| ||||||    
T  18746251 attttcaaactttagcgcaataaaaagagcagaaagacggggacatgagtgctcgtctttttgctagt 18746318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 35125799 - 35125740
Alignment:
Q  189 gttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||| |||||||||||| |||| | |||||| |||||||  |||||||||||||||||    
T  35125799 gttagcacaataaaaagagcagaaaggcgggtacgtgagtgtacgtcttttcgctagtta 35125740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 8875331 - 8875261
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| | |||||||||||||||||||  ||| |||||| | ||| | |||||||| |||||||||    
T  8875331 ataattttcaaatgttagcgcaataaaaagagcggaaagacgggcacgtgggagcccgtctattcgctagt 8875261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 9169952 - 9170022
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||| | |||||||||||||||||||||  ||| ||| |  | |||| |||||||||||||||||||    
T  9169952 ataatttttaaacgttagcgcaataaaaagagtggaaagacagtcacgtgattgcccgtcttttcgctagt 9170022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 19134063 - 19134133
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||| || | |||| |||||||||||||| ||||  |||| || ||||||| ||||||||||||||||    
T  19134063 ataatttacacatgttaacgcaataaaaagagcagaaaaacggatatgtgagtgtccgtcttttcgctagt 19134133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 7886219 - 7886174
Alignment:
Q  162 aaaaaatacaatctataattttcatacgttagcgcaataaaaagag 207  Q
    ||||||||| || ||||||||| | |||||||||||||||||||||    
T  7886219 aaaaaataccatttataatttttaaacgttagcgcaataaaaagag 7886174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 15265774 - 15265846
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| ||||||||| |||||||||||  ||| |||||| | |||  ||| |||||||||| ||||||    
T  15265774 ataattttcaaacgttagcgtaataaaaagagcggaaagacgggcacgtggatgctcgtcttttcgatagtta 15265846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 24004449 - 24004381
Alignment:
Q  178 aattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||| ||||| |||||||||||||||  ||| ||| || | |||||||||| | |||||||||||    
T  24004449 aattttcaaacgttggcgcaataaaaagagcggaaagacaggcacgtgagtgcccattttttcgctagt 24004381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 39997347 - 39997275
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| || |||||||||||||||||| |||| || ||| | ||||||| | ||||||| | ||||||    
T  39997347 ataattttcaaacattagcgcaataaaaagagtagaaagatgggcacgtgagtgtctgtctttttggtagtta 39997275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 20702726 - 20702790
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttc 240  Q
    |||||||||| |||||||||||||||||||||  ||| |||||| | ||||||||||||||||||    
T  20702726 ataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagtgcccgtcttttc 20702790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 17702435 - 17702363
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||||| ||||||||||| |||||||||  ||| || ||| |  |||||||||||||||||||||||||    
T  17702435 ataattttcaaacgttagcgcagtaaaaagagcggaaagaggggcacatgagtgcccgtcttttcgctagtta 17702363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 1363929 - 1364000
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| | ||||||||||||||||||  |||| | |||  | |||||||||||||||||||||||||    
T  1363929 ataattttcaaaggttagcgcaataaaaagaacagaaagtcggacacgtgagtgcccgtcttttcgctagtt 1364000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 35519274 - 35519345
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| |||||| | ||||||||||||  ||| |||||  | |||||||||||||||||||||||||    
T  35519274 ataattttcaaacgttaacacaataaaaagagcggaaagacggacatgtgagtgcccgtcttttcgctagtt 35519345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 5190634 - 5190704
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| | |||||||||||||||||||  ||| ||| |  | ||||||||||||||||||||||||    
T  5190634 ataattttcaaatgttagcgcaataaaaagagcggaaagacagacaggtgagtgcccgtcttttcgctagt 5190704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 2290919 - 2290849
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| || ||||||||||||||||| | ||| || ||| |  |||||| ||||||||||||||||    
T  2290919 ataattttcaaacattagcgcaataaaaagaaaggaaagatgggcacttgagtgtccgtcttttcgctagt 2290849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 7438117 - 7438047
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||| || ||||||||| |||||||| ||  ||| |||||| | ||||| ||||||||||||||||||    
T  7438117 ataatttacaaacgttagcgtaataaaaatagcggaaagacgggcacgtgagggcccgtcttttcgctagt 7438047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 37013165 - 37013096
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| || ||||| |||||||||||| ||||  ||||| | ||||||| ||||||||||||||||    
T  37013165 ataattttcaaactttagcacaataaaaagagcagaa-aacgggcatgtgagtgtccgtcttttcgctagt 37013096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 38720874 - 38720804
Alignment:
Q  177 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    ||||||||| |||||||| ||||||||||||  ||| |||||  | ||||| |||| ||||||||||||||    
T  38720874 taattttcaaacgttagcacaataaaaagaggggaaagacggacatgtgagggcccatcttttcgctagtt 38720804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 37831137 - 37831202
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttc 240  Q
    ||||||||| | |||||||||||||||||| || |||| ||  || | ||||||||||||||||||    
T  37831137 tataattttgaaacgttagcgcaataaaaatagcagaaagattggcacgtgagtgcccgtcttttc 37831202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 44277149 - 44277093
Alignment:
Q  190 ttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||||||||||||  ||| |||  | | ||||||||||||||||||||||||    
T  44277149 ttagcgcaataaaaagagcggaaagacatgcacgtgagtgcccgtcttttcgctagt 44277093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 239 - 169
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| |||||||||||| ||||||||   || ||||||||  |||||||||||||||||||||||    
T  239 ataattttcaaacgttagcgcaaaaaaaagagcgaaaagacgggtacttgagtgcccgtcttttcgctagt 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 57485 - 57415
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| |||||||||||||||||| || |||| |||||| | |||||||||||| ||||| |||||    
T  57485 ataattttcaaacgttagcgcaataaaaatagcagaaagacgggcacgtgagtgcccgtattttctctagt 57415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 5918840 - 5918910
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| |||||||||||||||||||||  ||| |||| | | ||||||| ||||||||||||||||    
T  5918840 ataattttcaaacgttagcgcaataaaaagagcggaaagacgagcacgtgagtgtccgtcttttcgctagt 5918910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 15898968 - 15899039
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||||| ||||||| |||| ||||||||  ||| |||||  | ||||||||||||||||||||||||    
T  15898968 tataattttcaaacgttagtgcaacaaaaagagcggaaagacggacacgtgagtgcccgtcttttcgctagt 15899039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 15044152 - 15044083
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| ||||||||||||||||| ||| ||||  || || | ||||||||||||||||||||||||    
T  15044152 ataattttcaaacgttagcgcaataaaa-gagcagaaaaacaggcacgtgagtgcccgtcttttcgctagt 15044083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 11352970 - 11353035
Alignment:
Q  186 tacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaata 251  Q
    ||||||||||||||||||||||  ||| ||| || | ||||||| |||||||||| ||||||||||    
T  11352970 tacgttagcgcaataaaaagagcggaaagacaggcacgtgagtgtccgtcttttcactagttaata 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 35451108 - 35451035
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 249  Q
    ||||||||||||||||| ||||||||||||||  |||  ||| | | |||||| | ||||||||||||||||||    
T  35451108 ataattttcatacgttaacgcaataaaaagagcggaaaaacgtgcacgtgagtacacgtcttttcgctagttaa 35451035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 23085650 - 23085702
Alignment:
Q  194 cgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||||||   ||| |||||||| ||||||||||||||||||||||||    
T  23085650 cgcaataaaaagaacggaaagacgggtatgtgagtgcccgtcttttcgctagt 23085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 38804526 - 38804458
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 244  Q
    |||||||||| |||||||||||||||||||||  ||| |||||| |  ||| ||||| |||||||||||    
T  38804526 ataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacatgaatgcccatcttttcgcta 38804458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 18994609 - 18994542
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgct 243  Q
    |||||||||| ||||  |||||||||||||||  ||| |||||| | ||||||||| |||||||||||    
T  18994609 ataattttcaaacgtcggcgcaataaaaagagcggaaagacgggcacgtgagtgccagtcttttcgct 18994542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 9280383 - 9280449
Alignment:
Q  182 ttcatacgttagcgcaataaaaagagaag-aacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||| |||||||||||||||||| | | | || |||||||| |||||||||| ||||||||||||||    
T  9280383 ttcaaacgttagcgcaataaaaaaaaacggaaagacgggtatgtgagtgcccatcttttcgctagtt 9280449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 27275432 - 27275522
Alignment:
Q  158 tcataaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    ||||| |||||||| | |||||||| || | ||| ||||| |||||| ||| ||| |||| ||| ||||||||| || |||||||||||||    
T  27275432 tcatataaaatacagtttataatttacacatgttcgcgcagtaaaaatagaggaaagacgagtatgtgagtgcctgttttttcgctagtta 27275522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 288964 - 289041
Alignment:
Q  162 aaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtctttt 239  Q
    ||||||||| || ||||||||||| | ||||| | ||||||||||| | ||  ||||| | |||||||||||||||||    
T  288964 aaaaaataccatttataattttcaaatgttagtgtaataaaaagagcaaaaacacgggcacgtgagtgcccgtctttt 289041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 19367922 - 19367853
Alignment:
Q  177 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||| |||||||| || ||||||||| |||| |||| | | |||| ||||| |||||||||||||    
T  19367922 taattttcaaacgttagcacagtaaaaagagcagaaagacgagcacgtgaatgcccatcttttcgctagt 19367853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 11938016 - 11938048
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagag 207  Q
    ||||||||||| |||||||||||||||||||||    
T  11938016 tataattttcaaacgttagcgcaataaaaagag 11938048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 1611881 - 1611812
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 244  Q
    ||||||||||| |||||||| |||||||||||| |||| |||||| | ||||||| || |||||||||||    
T  1611881 tataattttcaaacgttagcacaataaaaagagcagaaagacgggcacgtgagtgtccatcttttcgcta 1611812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 8990556 - 8990624
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 244  Q
    |||||||||| ||||| || |||||||||||| |||| |||||  | |||||||| |||||||||||||    
T  8990556 ataattttcaaacgttggcacaataaaaagagcagaaagacggacacgtgagtgctcgtcttttcgcta 8990624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 43370381 - 43370452
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| |  |||| ||||||||||||| |||| |||||  | ||||||||||||||||| |||||||    
T  43370381 ataattttcaaatattagtgcaataaaaagagcagaaagacggacaggtgagtgcccgtctttttgctagtt 43370452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 24836953 - 24837018
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcg 241  Q
    |||||||| | | |||||||||||||||||||  ||| |||| | | |||||||||||||||||||    
T  24836953 ataatttttaaaagttagcgcaataaaaagagcggaaagacgtgcacgtgagtgcccgtcttttcg 24837018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 9514968 - 9515000
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagaga 208  Q
    |||||||||| ||||||||||||||||||||||    
T  9514968 ataattttcaaacgttagcgcaataaaaagaga 9515000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 21158 - 21086
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    ||||||||||| | |||| | ||||||||||||  ||| |||||| | |||||||||||||||||||||||||    
T  21158 tataattttcaaatgttaacacaataaaaagagcggaaagacgggcatgtgagtgcccgtcttttcgctagtt 21086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 18461173 - 18461102
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| ||||||||||||||||||||||| || ||     | |||||||||||||||||||||||||    
T  18461173 ataattttcaaacgttagcgcaataaaaagagaataaagataaacatgtgagtgcccgtcttttcgctagtt 18461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 22258476 - 22258405
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||||||||||| | ||||||||||||  || |||||| | | || ||||||||||||||||||||    
T  22258476 ataattttcatacgttagtgaaataaaaagagagaaaagacgggcacgagattgcccgtcttttcgctagtt 22258405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 5811987 - 5811917
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| | ||||||| |||||||||||  ||| |||||| | |||||||| |||||||||||||||    
T  5811987 ataattttcaaatgttagcgaaataaaaagagcggaaagacgggcatgtgagtgctcgtcttttcgctagt 5811917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 22102620 - 22102690
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| |||||| ||||||||||||||  ||| || ||| | |||||||||||||||||| |||||    
T  22102620 ataattttcaaacgttaacgcaataaaaagagtggaaagaggggcacgtgagtgcccgtcttttcactagt 22102690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 49758281 - 49758211
Alignment:
Q  178 aattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||||||| |||||| ||||||||||||||   || |||||| | |||||||||||||||| |||||||||    
T  49758281 aattttcaaacgttaacgcaataaaaagagcgaaaagacgggcacgtgagtgcccgtctttacgctagtta 49758211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 21091846 - 21091777
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctag 245  Q
    |||||||||| ||||||| |||||||||||||| ||| |||||  | ||||||| || ||||||||||||    
T  21091846 ataattttcaaacgttagtgcaataaaaagagaggaaagacggacacgtgagtgtccatcttttcgctag 21091777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 7777752 - 7777839
Alignment:
Q  162 aaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtg-cccgtcttttcgctagtta 248  Q
    ||||||||| ||  |||||||||| || |||||| |||||||||||  | | |||||| | ||||||| |||||||||||||||||||    
T  7777752 aaaaaataccattaataattttcaaacattagcgtaataaaaagagcggtaagacgggcacgtgagtgccccgtcttttcgctagtta 7777839  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 18386785 - 18386715
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    |||||||||| | |||||||||||||||||||  ||| |||||  | ||||| |||||||||||||||||||    
T  18386785 ataattttca-atgttagcgcaataaaaagagtggaatgacggacatgtgagagcccgtcttttcgctagtt 18386715  T

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Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 18388651 - 18388580
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||||| ||||||| |||||||||||||  ||| ||| |  | ||||||||||||||||| ||||||    
T  18388651 tataattttcaaacgttagggcaataaaaagagcggaaagactgccacgtgagtgcccgtctttttgctagt 18388580  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 5530819 - 5530885
Alignment:
Q  181 tttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 247  Q
    ||||| ||||||  ||||||||||||| |||| |||||| | |||||||||  ||||||||||||||    
T  5530819 tttcaaacgttaatgcaataaaaagagcagaaagacgggcacgtgagtgccgatcttttcgctagtt 5530885  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 21824291 - 21824221
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    |||||||||| |  |||| |||||||||||||  ||| || ||| | ||||||||||||||||||||||||    
T  21824291 ataattttcaaatattagtgcaataaaaagagctgaaagatgggaacgtgagtgcccgtcttttcgctagt 21824221  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 265166 - 265238
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    |||| ||||| |||||||||||||||||||||  ||| |||||| | |  | ||||| |||||||||||||||    
T  265166 ataactttcaaacgttagcgcaataaaaagagcggaaagacgggcacgcaaatgcccatcttttcgctagtta 265238  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 14771124 - 14771073
Alignment:
Q  196 caataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 248  Q
    ||||||||||||  ||| |||||||| ||||||| ||||||||||||||||||    
T  14771124 caataaaaagagcggaaagacgggtacgtgagtg-ccgtcttttcgctagtta 14771073  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 24100 - 24171
Alignment:
Q  175 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 246  Q
    ||||||||| | ||||||||||||||||||||   ||| |||| |||  ||||||| |||||||||||||||    
T  24100 tataatttttaaacgttagcgcaataaaaagaacggaaagacgagtacatgagtgctcgtcttttcgctagt 24171  T

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Target: scaffold0268 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 21411 - 21484
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 249  Q
    |||||||||| || ||||||||||||||||||  ||| |||||  | | |||||||| |||||| |||||||||    
T  21411 ataattttcaaactttagcgcaataaaaagagcggaaagacggacacgcgagtgcccatctttttgctagttaa 21484  T

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Target: scaffold0330 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 18686 - 18750
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttc 240  Q
    |||||||| | |||||||||||||||||||||  ||| |||||| | ||| ||| ||||||||||    
T  18686 ataatttttaaacgttagcgcaataaaaagagcggaaagacgggcacgtgggtgtccgtcttttc 18750  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 2704 - 2768
Alignment:
Q  176 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttc 240  Q
    |||||||| | |||||||||||||||||||||  ||| |||||| | ||| ||| ||||||||||    
T  2704 ataatttttaaacgttagcgcaataaaaagagcggaaagacgggcacgtgggtgtccgtcttttc 2768  T

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