View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21207_low_21 (Length: 268)

Name: NF21207_low_21
Description: NF21207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21207_low_21
NF21207_low_21
[»] chr1 (16 HSPs)
chr1 (1-216)||(13129722-13129937)
chr1 (1-216)||(13094293-13094508)
chr1 (1-216)||(13161415-13161630)
chr1 (1-216)||(13070259-13070474)
chr1 (1-216)||(30368191-30368406)
chr1 (12-216)||(13204364-13204568)
chr1 (1-216)||(13100895-13101109)
chr1 (2-216)||(13007095-13007309)
chr1 (1-215)||(13244605-13244819)
chr1 (1-215)||(12963959-12964173)
chr1 (1-215)||(13271480-13271694)
chr1 (44-215)||(13065297-13065468)
chr1 (1-215)||(19279252-19279466)
chr1 (1-215)||(13080949-13081163)
chr1 (1-215)||(13086001-13086215)
chr1 (1-73)||(13010667-13010739)
[»] chr6 (5 HSPs)
chr6 (45-117)||(31380253-31380325)
chr6 (145-197)||(377572-377624)
chr6 (218-256)||(31376654-31376692)
chr6 (112-197)||(346845-346930)
chr6 (112-197)||(355504-355589)
[»] chr7 (1 HSPs)
chr7 (154-199)||(12164320-12164365)
[»] chr4 (1 HSPs)
chr4 (112-199)||(3321647-3321734)


Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13129722 - 13129937
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13129722 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 13129821  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13129822 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttg 13129921  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13129922 ttccatccttcccata 13129937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13094293 - 13094508
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13094293 tccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaatatctttacctatacaaattctgggtcctgtgt 13094392  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13094393 tgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttg 13094492  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13094493 ttccatccttcccata 13094508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13161415 - 13161630
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13161415 tccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 13161514  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||    
T  13161515 tgaaagatatgaacttgtaagaaggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttccccccatagttg 13161614  T
Q  201 ttccattcttcccata 216  Q
    |||||| || ||||||    
T  13161615 ttccatcctgcccata 13161630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13070474 - 13070259
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| || ||||| |    
T  13070474 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctcggacctgtat 13070375  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| ||||||||||||||| ||||||||||| | |||  |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  13070374 tgaaagctatgaacttgtaagatggaacatgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttg 13070275  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13070274 ttccatccttcccata 13070259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 30368406 - 30368191
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||| ||||||||||||||||||  |||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||| |||| |||||||| |    
T  30368406 tccacgacctgtatgtgaaacttccataacaaggcagctgcaaccatcttcatttgaacgaaactaagatctttacccatacaacttctaggtcctgtat 30368307  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| ||||||||||||||||||||||||||| | ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||     
T  30368306 tgaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgatacccatctctcaggcttaaattccatgcaatcttctccccatatttt 30368207  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  30368206 ttccatccttcccata 30368191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 13204364 - 13204568
Alignment:
Q  12 tatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacg 111  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| || ||||| |||||||||| |    
T  13204364 tatgtgaaaattctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctaggacctgtattgaaagctatg 13204463  T
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttgttccattcttc 211  Q
    |||||||||||||||||||||||||| | |||  |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  13204464 aacttgtaagatggtacatgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttc 13204563  T
Q  212 ccata 216  Q
    |||||    
T  13204564 ccata 13204568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13100895 - 13101109
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||| |||| |||||||  |    
T  13100895 tccaccacctgtatgtgaaacttcggtaacaaagcagctgcgaccatcttcatttgaatgaagctaatatccttacccatacaacttctaggtcctga-t 13100993  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| ||||||||||||||||||||||||||| | ||| ||||| || | ||||||||||||||||||||||||||| |||||||||||||||||    
T  13100994 tgaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttg 13101093  T
Q  201 ttccattcttcccata 216  Q
    |||||| |||||||||    
T  13101094 ttccatccttcccata 13101109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 13007095 - 13007309
Alignment:
Q  2 ccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgtt 101  Q
    ||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||| |||| ||| || || |||||| |||| || ||||| ||    
T  13007095 ccaccacctttatgtgaaactttggtaacaaagctgctgcgaccatcttcatttgaatgaagctaatatccttgcccatacaacttctaggacctgtatt 13007194  T
Q  102 gaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttgt 201  Q
    |||||||| ||||||||||||||||||||||||||| | ||| ||||| || | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  13007195 gaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttgt 13007294  T
Q  202 tccattcttcccata 216  Q
    ||||| |||||||||    
T  13007295 tccatccttcccata 13007309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13244819 - 13244605
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||||||| ||||||||  |||||||| |||||| ||||| |||||||||| ||| ||||||||||| || |||||| |||| || ||||  |    
T  13244819 tccaccacctgtatgcgaaacttccataacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcat 13244720  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    ||||||||| |||||||||||| ||||||| ||||||  |||| ||  | ||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  13244719 tgaaagctatgaacttgtaagacggtacatttataatccctcctctagctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttg 13244620  T
Q  201 ttccattcttcccat 215  Q
    || ||| ||||||||    
T  13244619 ttgcatccttcccat 13244605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12964173 - 12963959
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||| | |||||||||||||   |||| |  ||| || ||||| ||||||||||  || |||| |||||| || |||||| |||| || ||||  |    
T  12964173 tccaccacttctatgtgaaacttccacaacacattagcagcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcat 12964074  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||| |||| |||||| |||||||| || |||||||| ||||| || |  ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  12964073 tgaatgctatgaacttataagatggcacttgtataatttctcctctatttgatatccatctttcaggcttaaattccaagcaatcttctccccatatttg 12963974  T
Q  201 ttccattcttcccat 215  Q
    |||||| ||||||||    
T  12963973 ttccatccttcccat 12963959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 13271480 - 13271694
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    |||||||| |||||||||||||||  ||| | || |||||| ||||| ||||||||||| || |||| |||||| || | |||  |||| || ||||  |    
T  13271480 tccaccacatgtatgtgaaacttccataatacagaagctgcaaccattttcatttgaataaagctaatatctttcccaagacagcttctaggacctgcat 13271579  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    |||| |||| ||||||||||||||||||||||||||| | |||  | || ||||||||||||||||||||||| |||| ||||||  | |||||||  ||    
T  13271580 tgaatgctatgaacttgtaagatggtacatgtataatttgtcctttatctgatatccatctctcaggcttaaactccaagcaatcaccaccccatacatg 13271679  T
Q  201 ttccattcttcccat 215  Q
    |||||||||||||||    
T  13271680 ttccattcttcccat 13271694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 13065468 - 13065297
Alignment:
Q  44 ccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttgtaagatggtacatgtataatatctcc 143  Q
    |||||||||||| || |||  | | ||||||||| | |||| |||| || ||||  |||||||||| |||||||||||| |||||||||||||| | |||    
T  13065468 ccatcttcatttcaacgaaggtgatatctttacccaaacaacttcttggccctgcattgaaagctatgaacttgtaagacggtacatgtataatttgtcc 13065369  T
Q  144 cctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttgttccattcttcccat 215  Q
     || |  |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  13065368 gctttttgatatccatctctcaggcttaaattccatgcagtcttctccccatattttctccatccttcccat 13065297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 19279466 - 19279252
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||| ||||||||| ||||||||  ||| | ||||||||| ||||| |||||||||| |||| ||| |||||| || | |||  |||| || ||||  |    
T  19279466 tccacgacctgtatgcgaaacttccataatacagcagctgcaaccattttcatttgaaggaaagtaatatcttttccgagacagcttctcggacctgcat 19279367  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    | || |||| ||||||||| ||||||||||||||||| | ||| || || ||||||||||||||||||  |||||| | |||||| || |||||||||||    
T  19279366 taaacgctatgaacttgtacgatggtacatgtataatttgtcctctatccgatatccatctctcaggccgaaattctaggcaatcatcaccccatatttg 19279267  T
Q  201 ttccattcttcccat 215  Q
    |||||| ||||||||    
T  19279266 ttccatccttcccat 19279252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 13081163 - 13080949
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||||||||| |||||||||||   ||| |  |||||||| ||||| ||||||||||  ||||||| |||||| || | |||  |||| || ||||  |    
T  13081163 tccaccacctgaatgtgaaacttaaataaaactgcagctgcaaccattttcatttgaagaaaactaatatctttcccaagacagcttcttggacctgcat 13081064  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    | || |||| |||||| ||||| || || |||||||| | ||| || || ||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  13081063 taaacgctatgaacttataagacggcacttgtataatttgtcctctatctgatatccatctctcaggcttaaactccaagcaatcctctccccatatttg 13080964  T
Q  201 ttccattcttcccat 215  Q
     ||||| ||||||||    
T  13080963 ctccatccttcccat 13080949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 13086001 - 13086215
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgt 100  Q
    ||||| || |||||||||||||||  ||||| ||||||||| ||||| ||||||||||  |  |||| |||||| || | |||| |||  || ||||  |    
T  13086001 tccacaacttgtatgtgaaacttccataacatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcat 13086100  T
Q  101 tgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatatttg 200  Q
    | || |||| ||||||| ||||||||||||| | ||||| |||  | || |||||||||||||| ||||||||||| | || ||| |  |||||||||||    
T  13086101 taaatgctatgaacttgcaagatggtacatgcaaaatatgtcctttatctgatatccatctctcgggcttaaattcgaagcgatccttaccccatatttg 13086200  T
Q  201 ttccattcttcccat 215  Q
    || ||| ||||||||    
T  13086201 tttcatccttcccat 13086215  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13010667 - 13010739
Alignment:
Q  1 tccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctt 73  Q
    |||||||| |||||| |||| |||  ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  13010667 tccaccacttgtatgcgaaatttccataacaaatcagctgcgaccatcttcattagaatgaaactaagatctt 13010739  T

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Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 31380325 - 31380253
Alignment:
Q  45 catcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttg 117  Q
    |||||| |||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||| || |||||||    
T  31380325 catcttaatttgaatgaaactaagatctttaccaatacaacttccgggtcctgtattgaaagatatgaacttg 31380253  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 377624 - 377572
Alignment:
Q  145 ctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatat 197  Q
    |||||||||||||||||||| ||||| || |||| ||||||||||||||||||    
T  377624 ctctcagatatccatctctctggcttgaactccaagcaatcttctccccatat 377572  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 31376654 - 31376692
Alignment:
Q  218 atgacctttcaaaactaaggtgacatggttgttgaaatt 256  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31376654 atgacctttcaaaactaaggtgacatggttattgaaatt 31376692  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 346845 - 346930
Alignment:
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatat 197  Q
    |||||||||||||||  ||| | |||  |||| |||||||||||||||||||| ||||| || ||||  ||||||| |||||||||    
T  346845 aacttgtaagatggtgtatgaacaatgcctcctctctcagatatccatctctctggcttgaactccaaacaatcttttccccatat 346930  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 355504 - 355589
Alignment:
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatat 197  Q
    |||||||||||||||  ||| | |||  |||| |||||||||||||||||||| ||||| || ||||  ||||||| |||||||||    
T  355504 aacttgtaagatggtgtatgaacaatgcctcctctctcagatatccatctctctggcttgaactccaaacaatcttttccccatat 355589  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 12164320 - 12164365
Alignment:
Q  154 atccatctctcaggcttaaattccatgcaatcttctccccatattt 199  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  12164320 atccacctctctggcttaaattccaagcaatcttctccccatattt 12164365  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 3321734 - 3321647
Alignment:
Q  112 aacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcaatcttctccccatattt 199  Q
    ||||||||||| |||||||| || || |||||  ||| ||| ||||| ||||| || ||||| |||| ||||||||||||||| ||||    
T  3321734 aacttgtaagaaggtacatgaattatttctcctttcttagaaatccacctctctggtttaaactccaagcaatcttctccccaaattt 3321647  T

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