View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21207_low_31 (Length: 217)

Name: NF21207_low_31
Description: NF21207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21207_low_31
NF21207_low_31
[»] chr4 (61 HSPs)
chr4 (13-114)||(28172569-28172670)
chr4 (13-120)||(3034305-3034412)
chr4 (13-120)||(9367335-9367442)
chr4 (13-120)||(27956977-27957084)
chr4 (13-120)||(4654467-4654574)
chr4 (13-120)||(8940742-8940849)
chr4 (13-120)||(30824140-30824247)
chr4 (13-120)||(41040025-41040132)
chr4 (13-120)||(46719201-46719308)
chr4 (13-120)||(55449896-55450003)
chr4 (13-120)||(16666174-16666282)
chr4 (13-120)||(43304390-43304498)
chr4 (13-120)||(34074512-34074619)
chr4 (13-120)||(42179780-42179887)
chr4 (13-120)||(52448858-52448965)
chr4 (13-120)||(54920891-54920998)
chr4 (18-108)||(23417770-23417860)
chr4 (11-111)||(31289831-31289931)
chr4 (13-120)||(7488790-7488897)
chr4 (13-120)||(20352459-20352566)
chr4 (13-120)||(20785583-20785690)
chr4 (18-91)||(17362629-17362702)
chr4 (18-91)||(4654168-4654241)
chr4 (18-91)||(23418090-23418163)
chr4 (18-91)||(28172890-28172963)
chr4 (29-114)||(35825988-35826073)
chr4 (18-91)||(54920593-54920666)
chr4 (16-120)||(49875233-49875336)
chr4 (18-89)||(50495077-50495148)
chr4 (18-91)||(7488459-7488532)
chr4 (18-91)||(16665857-16665930)
chr4 (13-114)||(23932034-23932134)
chr4 (18-90)||(3034629-3034701)
chr4 (18-90)||(41040339-41040411)
chr4 (10-94)||(27317637-27317722)
chr4 (38-91)||(9367672-9367725)
chr4 (37-114)||(13530843-13530920)
chr4 (18-91)||(13533383-13533456)
chr4 (18-91)||(17519597-17519670)
chr4 (18-91)||(30824459-30824532)
chr4 (18-91)||(34074196-34074269)
chr4 (18-82)||(52448581-52448645)
chr4 (18-89)||(20352847-20352918)
chr4 (21-91)||(27958264-27958334)
chr4 (21-91)||(31291467-31291537)
chr4 (53-114)||(17519315-17519376)
chr4 (18-91)||(35825699-35825772)
chr4 (38-91)||(46718931-46718984)
chr4 (18-70)||(20342141-20342193)
chr4 (20-91)||(49874938-49875009)
chr4 (139-182)||(20352585-20352628)
chr4 (20-91)||(20785922-20785993)
chr4 (137-182)||(16666110-16666155)
chr4 (18-91)||(23932366-23932438)
chr4 (138-175)||(30824268-30824305)
chr4 (138-182)||(4654408-4654452)
chr4 (138-182)||(7488730-7488774)
chr4 (138-182)||(8940684-8940728)
chr4 (138-182)||(9367457-9367501)
chr4 (138-182)||(23417881-23417925)
chr4 (138-182)||(34074448-34074492)
[»] scaffold0208 (3 HSPs)
scaffold0208 (13-120)||(4282-4389)
scaffold0208 (18-91)||(4622-4695)
scaffold0208 (138-182)||(4410-4454)
[»] chr8 (59 HSPs)
chr8 (13-120)||(6096336-6096443)
chr8 (15-120)||(45407664-45407769)
chr8 (13-120)||(15881685-15881792)
chr8 (13-120)||(18956916-18957023)
chr8 (13-114)||(278251-278352)
chr8 (13-114)||(637500-637601)
chr8 (13-114)||(823303-823404)
chr8 (16-120)||(3703615-3703719)
chr8 (13-120)||(30476423-30476530)
chr8 (13-120)||(30555127-30555234)
chr8 (13-120)||(40618021-40618128)
chr8 (13-120)||(42646848-42646955)
chr8 (13-119)||(41546363-41546469)
chr8 (13-110)||(18087950-18088047)
chr8 (13-114)||(40302862-40302963)
chr8 (37-120)||(36192933-36193016)
chr8 (13-119)||(39859471-39859577)
chr8 (13-114)||(3851542-3851643)
chr8 (13-114)||(38059687-38059788)
chr8 (13-112)||(41182851-41182950)
chr8 (13-114)||(13139756-13139857)
chr8 (18-91)||(44257301-44257374)
chr8 (13-114)||(44257608-44257709)
chr8 (13-120)||(4621935-4622041)
chr8 (13-120)||(16097120-16097227)
chr8 (13-92)||(32058013-32058092)
chr8 (18-91)||(15882016-15882089)
chr8 (18-91)||(18956612-18956685)
chr8 (18-91)||(30476773-30476846)
chr8 (29-110)||(42737065-42737146)
chr8 (30-120)||(23345617-23345707)
chr8 (18-91)||(13140115-13140188)
chr8 (18-91)||(16096908-16096981)
chr8 (18-91)||(23345929-23346002)
chr8 (18-91)||(36192641-36192714)
chr8 (18-91)||(41183142-41183215)
chr8 (18-91)||(42646554-42646627)
chr8 (21-91)||(38060006-38060077)
chr8 (13-67)||(26965816-26965870)
chr8 (18-91)||(6096034-6096107)
chr8 (18-91)||(18088326-18088399)
chr8 (18-89)||(277962-278034)
chr8 (18-89)||(637818-637890)
chr8 (18-89)||(823621-823693)
chr8 (18-82)||(43693975-43694039)
chr8 (18-89)||(40303183-40303254)
chr8 (29-90)||(30088608-30088669)
chr8 (18-91)||(30555464-30555537)
chr8 (18-91)||(39859177-39859250)
chr8 (18-91)||(41546070-41546143)
chr8 (21-82)||(42736762-42736823)
chr8 (22-91)||(45408005-45408074)
chr8 (18-90)||(40617717-40617789)
chr8 (18-91)||(3851222-3851295)
chr8 (139-182)||(30476541-30476584)
chr8 (138-182)||(18088066-18088110)
chr8 (138-182)||(41182976-41183020)
chr8 (138-182)||(41546308-41546352)
chr8 (138-182)||(45407787-45407831)
[»] chr7 (63 HSPs)
chr7 (13-120)||(17286749-17286856)
chr7 (13-120)||(38180100-38180207)
chr7 (13-120)||(46934681-46934788)
chr7 (13-120)||(723933-724040)
chr7 (9-120)||(4657452-4657563)
chr7 (13-120)||(20121829-20121936)
chr7 (13-120)||(41856724-41856831)
chr7 (13-120)||(44457349-44457456)
chr7 (13-120)||(47907390-47907497)
chr7 (13-120)||(48950676-48950783)
chr7 (13-114)||(41337828-41337929)
chr7 (13-120)||(3413115-3413222)
chr7 (13-120)||(23592959-23593066)
chr7 (13-120)||(40014075-40014182)
chr7 (13-120)||(17961926-17962033)
chr7 (13-120)||(33245047-33245154)
chr7 (13-114)||(46001348-46001449)
chr7 (13-92)||(13931065-13931144)
chr7 (14-113)||(47505227-47505325)
chr7 (18-91)||(724262-724335)
chr7 (18-91)||(18993974-18994047)
chr7 (13-114)||(41288605-41288706)
chr7 (13-89)||(19233021-19233097)
chr7 (13-120)||(21816872-21816979)
chr7 (13-120)||(46553887-46553993)
chr7 (18-91)||(4657832-4657905)
chr7 (18-91)||(41337499-41337572)
chr7 (18-91)||(44457693-44457766)
chr7 (18-91)||(44883932-44884005)
chr7 (13-114)||(44884278-44884379)
chr7 (29-114)||(48606039-48606124)
chr7 (13-89)||(8391882-8391958)
chr7 (18-120)||(21736961-21737063)
chr7 (17-91)||(48951003-48951077)
chr7 (18-91)||(23593302-23593375)
chr7 (18-91)||(40014408-40014481)
chr7 (18-91)||(46001038-46001111)
chr7 (18-91)||(46554213-46554286)
chr7 (18-91)||(47907726-47907799)
chr7 (18-90)||(21816595-21816667)
chr7 (19-90)||(33245362-33245433)
chr7 (13-89)||(39982702-39982780)
chr7 (37-114)||(9659819-9659896)
chr7 (18-91)||(9662359-9662432)
chr7 (18-91)||(21736649-21736722)
chr7 (18-91)||(48606351-48606424)
chr7 (19-91)||(20121536-20121608)
chr7 (19-91)||(41857052-41857124)
chr7 (18-90)||(46935007-46935079)
chr7 (18-89)||(41288922-41288993)
chr7 (18-91)||(8392218-8392291)
chr7 (18-91)||(44520825-44520898)
chr7 (18-91)||(47504803-47504876)
chr7 (18-70)||(3413462-3413514)
chr7 (13-91)||(37666084-37666162)
chr7 (15-92)||(35214333-35214405)
chr7 (137-182)||(44520613-44520658)
chr7 (138-182)||(724050-724094)
chr7 (138-182)||(17286877-17286921)
chr7 (138-182)||(23593085-23593129)
chr7 (138-182)||(38180216-38180260)
chr7 (138-182)||(41337770-41337814)
chr7 (138-182)||(44884220-44884264)
[»] chr5 (46 HSPs)
chr5 (13-120)||(11986111-11986218)
chr5 (9-120)||(39590222-39590333)
chr5 (13-120)||(9985780-9985887)
chr5 (13-120)||(19504571-19504678)
chr5 (13-120)||(27552250-27552357)
chr5 (13-120)||(30129069-30129176)
chr5 (13-119)||(11077956-11078064)
chr5 (13-120)||(9593351-9593458)
chr5 (9-120)||(12500922-12501033)
chr5 (13-120)||(27018574-27018681)
chr5 (13-120)||(31547889-31547996)
chr5 (13-114)||(19666142-19666243)
chr5 (13-114)||(20544640-20544741)
chr5 (13-113)||(823270-823370)
chr5 (13-120)||(37938934-37939041)
chr5 (13-120)||(42610359-42610466)
chr5 (13-120)||(7180080-7180190)
chr5 (18-91)||(823596-823669)
chr5 (29-114)||(34401727-34401812)
chr5 (18-91)||(42610691-42610764)
chr5 (18-89)||(39589907-39589978)
chr5 (13-82)||(744525-744594)
chr5 (18-91)||(7180441-7180514)
chr5 (18-91)||(11985833-11985906)
chr5 (18-91)||(12500587-12500660)
chr5 (13-90)||(31481076-31481153)
chr5 (29-114)||(37272243-37272327)
chr5 (18-91)||(37939260-37939333)
chr5 (13-90)||(41408522-41408599)
chr5 (13-90)||(1833475-1833552)
chr5 (18-91)||(9986121-9986194)
chr5 (18-91)||(27551930-27552003)
chr5 (13-90)||(40318941-40319018)
chr5 (40-91)||(9593011-9593062)
chr5 (13-92)||(25654110-25654189)
chr5 (18-76)||(19666087-19666145)
chr5 (18-91)||(31550928-31551001)
chr5 (13-89)||(9532010-9532086)
chr5 (38-90)||(27018886-27018938)
chr5 (18-89)||(37271918-37271989)
chr5 (18-91)||(20544960-20545038)
chr5 (14-74)||(9531639-9531699)
chr5 (18-70)||(15421434-15421486)
chr5 (138-182)||(9593293-9593337)
chr5 (138-182)||(9985910-9985954)
chr5 (138-182)||(12500870-12500914)
[»] chr3 (90 HSPs)
chr3 (13-120)||(18763474-18763581)
chr3 (13-120)||(27127672-27127779)
chr3 (16-120)||(37218615-37218719)
chr3 (13-120)||(27330371-27330478)
chr3 (13-120)||(40907642-40907749)
chr3 (13-120)||(41103226-41103333)
chr3 (13-120)||(44841643-44841750)
chr3 (13-120)||(50546925-50547032)
chr3 (10-120)||(2219478-2219588)
chr3 (13-119)||(10826196-10826302)
chr3 (13-119)||(22606346-22606452)
chr3 (13-113)||(30041895-30041995)
chr3 (13-120)||(8850220-8850327)
chr3 (13-120)||(16010307-16010414)
chr3 (13-120)||(23021274-23021381)
chr3 (13-120)||(30362055-30362162)
chr3 (13-120)||(45172219-45172326)
chr3 (9-119)||(52746095-52746206)
chr3 (13-119)||(15083162-15083268)
chr3 (13-114)||(31312113-31312214)
chr3 (13-120)||(3891158-3891266)
chr3 (16-120)||(37180471-37180575)
chr3 (12-120)||(45052164-45052271)
chr3 (13-120)||(18411619-18411726)
chr3 (13-120)||(30438685-30438792)
chr3 (13-120)||(37786886-37786992)
chr3 (20-114)||(42827500-42827594)
chr3 (13-114)||(41696524-41696625)
chr3 (13-120)||(11123145-11123251)
chr3 (13-120)||(13243077-13243183)
chr3 (13-120)||(27328673-27328780)
chr3 (13-120)||(47911395-47911502)
chr3 (18-91)||(30042254-30042327)
chr3 (18-91)||(41696869-41696942)
chr3 (29-114)||(51721310-51721395)
chr3 (13-120)||(16465410-16465517)
chr3 (13-91)||(22427691-22427769)
chr3 (18-92)||(38236692-38236766)
chr3 (18-91)||(15083505-15083578)
chr3 (18-91)||(16010000-16010073)
chr3 (18-91)||(27330701-27330774)
chr3 (13-90)||(33214030-33214107)
chr3 (18-91)||(37786572-37786645)
chr3 (18-91)||(47911770-47911843)
chr3 (18-91)||(50547256-50547329)
chr3 (18-90)||(41102886-41102958)
chr3 (14-91)||(2584582-2584658)
chr3 (13-120)||(4231291-4231398)
chr3 (18-89)||(45052485-45052556)
chr3 (29-120)||(53776853-53776944)
chr3 (29-120)||(55412711-55412802)
chr3 (22-91)||(3891496-3891565)
chr3 (18-91)||(4231686-4231759)
chr3 (18-91)||(22606070-22606143)
chr3 (18-91)||(30362386-30362459)
chr3 (18-91)||(38698022-38698095)
chr3 (18-91)||(43339500-43339573)
chr3 (29-114)||(43339796-43339881)
chr3 (18-91)||(44841970-44842043)
chr3 (18-91)||(45171911-45171984)
chr3 (18-91)||(55412411-55412484)
chr3 (18-90)||(2219195-2219267)
chr3 (18-90)||(16465133-16465205)
chr3 (18-82)||(18763141-18763205)
chr3 (18-90)||(27127388-27127460)
chr3 (18-90)||(27328350-27328422)
chr3 (18-90)||(31312435-31312507)
chr3 (18-89)||(11122797-11122868)
chr3 (18-91)||(10826517-10826590)
chr3 (18-91)||(23020997-23021070)
chr3 (13-90)||(29835171-29835248)
chr3 (18-91)||(30439081-30439154)
chr3 (29-114)||(38698329-38698414)
chr3 (18-91)||(40907342-40907415)
chr3 (18-89)||(8850559-8850630)
chr3 (18-91)||(37218968-37219041)
chr3 (13-89)||(2584987-2585062)
chr3 (38-82)||(18411346-18411390)
chr3 (29-91)||(37180834-37180896)
chr3 (21-91)||(51721608-51721678)
chr3 (18-89)||(42827201-42827272)
chr3 (29-67)||(40424432-40424470)
chr3 (138-182)||(4231411-4231455)
chr3 (138-182)||(27330492-27330536)
chr3 (138-182)||(30042013-30042057)
chr3 (138-182)||(30438805-30438849)
chr3 (138-182)||(41103172-41103216)
chr3 (138-182)||(47911512-47911556)
chr3 (142-182)||(53776958-53776998)
chr3 (43-91)||(53777175-53777223)
[»] scaffold0060 (2 HSPs)
scaffold0060 (13-120)||(57711-57818)
scaffold0060 (18-91)||(57410-57483)
[»] scaffold0006 (2 HSPs)
scaffold0006 (9-120)||(56008-56119)
scaffold0006 (18-89)||(55708-55779)
[»] chr2 (40 HSPs)
chr2 (13-120)||(3905359-3905466)
chr2 (13-120)||(15154022-15154129)
chr2 (13-120)||(27550051-27550158)
chr2 (13-114)||(25224906-25225007)
chr2 (16-120)||(39965597-39965701)
chr2 (13-120)||(42079308-42079415)
chr2 (16-120)||(3753407-3753511)
chr2 (13-120)||(76028-76135)
chr2 (13-92)||(12522115-12522194)
chr2 (13-120)||(25761605-25761710)
chr2 (13-111)||(38280712-38280810)
chr2 (13-82)||(45136294-45136363)
chr2 (10-114)||(39067482-39067586)
chr2 (21-120)||(39773660-39773759)
chr2 (13-120)||(6646578-6646693)
chr2 (13-91)||(38407868-38407946)
chr2 (29-118)||(2290841-2290930)
chr2 (18-91)||(38281032-38281105)
chr2 (40-120)||(3850270-3850350)
chr2 (13-88)||(14004465-14004540)
chr2 (13-110)||(4737165-4737265)
chr2 (13-110)||(28390453-28390549)
chr2 (18-90)||(76402-76474)
chr2 (13-120)||(1053585-1053687)
chr2 (19-90)||(3905678-3905749)
chr2 (18-91)||(1053907-1053980)
chr2 (18-91)||(15400135-15400208)
chr2 (37-114)||(15400437-15400514)
chr2 (18-91)||(27550395-27550468)
chr2 (18-91)||(28390763-28390836)
chr2 (18-91)||(39965932-39966005)
chr2 (21-91)||(2291139-2291209)
chr2 (18-91)||(6646271-6646344)
chr2 (18-91)||(15153768-15153841)
chr2 (18-91)||(39773983-39774056)
chr2 (18-90)||(39067808-39067880)
chr2 (19-91)||(42079689-42079761)
chr2 (18-68)||(37724305-37724355)
chr2 (18-91)||(3850598-3850671)
chr2 (138-182)||(27550184-27550228)
[»] chr1 (43 HSPs)
chr1 (13-120)||(21096917-21097024)
chr1 (13-120)||(44510862-44510969)
chr1 (13-120)||(48129209-48129316)
chr1 (15-119)||(14535805-14535909)
chr1 (13-120)||(25657326-25657433)
chr1 (9-120)||(30301448-30301559)
chr1 (13-120)||(33706065-33706172)
chr1 (13-120)||(5328400-5328507)
chr1 (13-120)||(10774244-10774351)
chr1 (13-120)||(30838209-30838316)
chr1 (13-120)||(31031579-31031686)
chr1 (13-106)||(12769170-12769263)
chr1 (13-114)||(51088150-51088251)
chr1 (13-114)||(7154364-7154465)
chr1 (9-89)||(34333860-34333940)
chr1 (18-91)||(33705788-33705861)
chr1 (18-91)||(48128917-48128990)
chr1 (37-117)||(9135960-9136040)
chr1 (9-67)||(46123232-46123290)
chr1 (13-82)||(7557054-7557123)
chr1 (18-91)||(14536163-14536236)
chr1 (18-91)||(25657016-25657089)
chr1 (29-114)||(35955856-35955941)
chr1 (18-89)||(33004921-33004992)
chr1 (19-90)||(44511179-44511250)
chr1 (18-91)||(7154111-7154184)
chr1 (18-91)||(10773920-10773993)
chr1 (18-91)||(35955570-35955643)
chr1 (29-90)||(36732125-36732186)
chr1 (13-90)||(47035658-47035735)
chr1 (18-91)||(30301781-30301854)
chr1 (18-91)||(46464287-46464360)
chr1 (39-120)||(29648002-29648087)
chr1 (23-89)||(9135661-9135727)
chr1 (137-182)||(29648102-29648147)
chr1 (38-91)||(51087877-51087930)
chr1 (19-67)||(12162014-12162062)
chr1 (18-62)||(29520846-29520890)
chr1 (43-91)||(33005240-33005288)
chr1 (29-114)||(29520657-29520739)
chr1 (53-91)||(30838554-30838592)
chr1 (18-91)||(29648312-29648384)
chr1 (137-182)||(30301571-30301616)
[»] chr6 (29 HSPs)
chr6 (13-120)||(14105448-14105556)
chr6 (13-120)||(954100-954207)
chr6 (13-120)||(4588316-4588423)
chr6 (14-120)||(27441380-27441486)
chr6 (13-114)||(24084082-24084183)
chr6 (13-114)||(27783942-27784043)
chr6 (13-113)||(23581730-23581830)
chr6 (37-120)||(5686820-5686903)
chr6 (13-120)||(16921757-16921864)
chr6 (13-114)||(25120165-25120266)
chr6 (18-91)||(14105163-14105236)
chr6 (18-91)||(16919344-16919417)
chr6 (18-91)||(27783622-27783695)
chr6 (18-91)||(4588661-4588734)
chr6 (18-91)||(11836407-11836480)
chr6 (29-114)||(28580002-28580087)
chr6 (13-120)||(11153040-11153142)
chr6 (13-67)||(15287893-15287947)
chr6 (18-91)||(5687075-5687148)
chr6 (18-91)||(25119839-25119912)
chr6 (18-91)||(27441086-27441159)
chr6 (18-91)||(954428-954501)
chr6 (18-91)||(28579725-28579798)
chr6 (45-94)||(478195-478244)
chr6 (13-90)||(944488-944565)
chr6 (18-91)||(11153421-11153494)
chr6 (45-92)||(478666-478713)
chr6 (137-182)||(24084020-24084065)
chr6 (138-182)||(4588437-4588481)
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-120)||(45875-45981)
scaffold0003 (18-91)||(46202-46275)
[»] scaffold0115 (2 HSPs)
scaffold0115 (20-91)||(23171-23242)
scaffold0115 (13-53)||(23550-23590)
[»] scaffold0259 (2 HSPs)
scaffold0259 (16-67)||(4652-4703)
scaffold0259 (18-82)||(4745-4809)


Alignment Details
Target: chr4 (Bit Score: 74; Significance: 4e-34; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 28172569 - 28172670
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||  |||| |||||||||||||    
T  28172569 tacacaaatatatctccaaatattatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaaccctgtagagaaagagatttagt 28172668  T
Q  113 tt 114  Q
    ||    
T  28172669 tt 28172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 3034305 - 3034412
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  3034305 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 3034404  T
Q  113 tttatcac 120  Q
    || |||||    
T  3034405 ttcatcac 3034412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 9367335 - 9367442
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  9367335 tacacaaatatatcttcaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 9367434  T
Q  113 tttatcac 120  Q
    || |||||    
T  9367435 ttcatcac 9367442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 27956977 - 27957084
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||  ||||||||||||||||||    
T  27956977 tacacaaatatatctcaaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctgtagaaaaagagatttagt 27957076  T
Q  113 tttatcac 120  Q
    || |||||    
T  27957077 ttcatcac 27957084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 4654574 - 4654467
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||| ||||||    
T  4654574 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagttttagt 4654475  T
Q  113 tttatcac 120  Q
    || |||||    
T  4654474 ttcatcac 4654467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 8940849 - 8940742
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  | ||||||||||| ||||| ||| ||||| |||||||||||||    
T  8940849 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcctttaaacacaaaaatcaaacccctatagagaaagagatttagt 8940750  T
Q  113 tttatcac 120  Q
    || |||||    
T  8940749 ttcatcac 8940742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 30824140 - 30824247
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || |||| |||||| ||||| ||| ||||| |||||||||||||    
T  30824140 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaatacaaaaatcaaacccctatagagaaagagatttagt 30824239  T
Q  113 tttatcac 120  Q
    || |||||    
T  30824240 ttcatcac 30824247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 41040025 - 41040132
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  41040025 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 41040124  T
Q  113 tttatcac 120  Q
    || |||||    
T  41040125 ttcatcac 41040132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 46719308 - 46719201
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| ||||||||||||||| | ||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||    
T  46719308 tacacaaatatatctctaaatatcatgaattaatgttatatccacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 46719209  T
Q  113 tttatcac 120  Q
    || |||||    
T  46719208 ttcatcac 46719201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 55449896 - 55450003
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||| ||||| || |||||||||||||    
T  55449896 tacacaaatgtatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaatccaatggagaaagagatttagt 55449995  T
Q  113 tttatcac 120  Q
    || |||||    
T  55449996 ttcatcac 55450003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 16666282 - 16666174
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacac-aaaagtcaaaacccaatagaaaaagagatttag 111  Q
    ||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||| || ||||||| |||| ||||||||| ||||| ||||||||||||    
T  16666282 tacacaaatatatctccaaatatcatgaattaatgatatattcacctcaaatcttcttttaaacacaaaaaatcaaaaccctatagagaaagagatttag 16666183  T
Q  112 ttttatcac 120  Q
    ||| |||||    
T  16666182 tttcatcac 16666174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 43304498 - 43304390
Alignment:
Q  13 tacacaaatatatcttcaaa-tattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttag 111  Q
    ||||||||||||||| |||| | | ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| || || ||||||||||||    
T  43304498 tacacaaatatatctccaaaatctcatgaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccctatggagaaagagatttag 43304399  T
Q  112 ttttatcac 120  Q
    ||| |||||    
T  43304398 tttcatcac 43304390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 34074619 - 34074512
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||||| |||||||| ||||||||||| || ||||||||||| ||||||||| ||  | |||||||||||||    
T  34074619 tacacaaatatatctccaaatatcatgaattaatattatgttcgcctcaaatcttcttttaaacacaaaaatcaaaaccctatgaagaaagagatttagt 34074520  T
Q  113 tttatcac 120  Q
    || |||||    
T  34074519 ttcatcac 34074512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 42179887 - 42179780
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||| |||||||| || ||||||| | || || |||||||||||||    
T  42179887 tacacaaatatatctccaaatatcatgaattaatgtaatgttcacctcaaatattattttaaacacataaatcaaaactctatggagaaagagatttagt 42179788  T
Q  113 tttatcac 120  Q
    || |||||    
T  42179787 ttcatcac 42179780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 52448965 - 52448858
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  52448965 tacacaaatatatctcaaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 52448866  T
Q  113 tttatcac 120  Q
    || |||||    
T  52448865 ttcatcac 52448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 54920998 - 54920891
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| || |||||||||||| || ||||||||||| ||||| ||| ||||  |||||||||||||    
T  54920998 tacacaaatatatctccaaatatcatgaattaatgttatatttacctcaaatcttcttttaaacacaaaaatcaaacccctatagggaaagagatttagt 54920899  T
Q  113 tttatcac 120  Q
    || |||||    
T  54920898 ttcatcac 54920891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 23417770 - 23417860
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatt 108  Q
    |||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||| ||||| |||||||||    
T  23417770 aaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaacccctatagagaaagagatt 23417860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 31289831 - 31289931
Alignment:
Q  11 tatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattta 110  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || | ||||||||| |||||||||  || | |||||||||||    
T  31289831 tatacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttgaacacaaaaatcaaaaccctgtaaagaaagagattta 31289930  T
Q  111 g 111  Q
    |    
T  31289931 g 31289931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 7488897 - 7488790
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| | | ||||| ||||| |||||||    
T  7488897 tacacaaatatatctctaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacctctatagagaaagaaatttagt 7488798  T
Q  113 tttatcac 120  Q
    || |||||    
T  7488797 ttcatcac 7488790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 20352459 - 20352566
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  | |||| |||||| ||||| ||| ||||| ||||| |||||||    
T  20352459 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatctttctttaaaaacaaaaatcaaacccctatagagaaagatatttagt 20352558  T
Q  113 tttatcac 120  Q
    || |||||    
T  20352559 ttcatcac 20352566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 20785583 - 20785690
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| || |||||||||||   ||| ||| | |||||||||||||||||    
T  20785583 tacacaaacatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaaataaacccctacagaaaaagagatttagt 20785682  T
Q  113 tttatcac 120  Q
    || |||||    
T  20785683 ttcatcac 20785690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 17362629 - 17362702
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  17362629 aaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 17362702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 4654168 - 4654241
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  4654168 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 4654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 23418163 - 23418090
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  23418163 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 23418090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 28172963 - 28172890
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  28172963 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 28172890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 35826073 - 35825988
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||   |||| |||||||||||||||    
T  35826073 caaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccttgtagagaaagagatttagttt 35825988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 54920593 - 54920666
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  54920593 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 54920666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 49875336 - 49875233
Alignment:
Q  16 acaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtttt 115  Q
    ||||||||||||  |||||| | ||||||||||||| ||||| ||||||||| || ||||||||||| ||||||||| ||| | |||||||||||||||     
T  49875336 acaaatatatctcaaaatatcacgaattaatgttatattcac-tcaaatcttcttttaaacacaaaaatcaaaaccctataaagaaagagatttagtttc 49875238  T
Q  116 atcac 120  Q
    |||||    
T  49875237 atcac 49875233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 50495148 - 50495077
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||||||||||||||||  |||||||||||||| |||| |||||||||| |||||||||||||| ||||||    
T  50495148 aaatatatcttcaaatatcgtgaattaatgttatattcagctcaaatcttcttctaaacacaaaaatcaaaa 50495077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 7488459 - 7488532
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  ||||||| |||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  7488459 aaatatatcttcaaatatcgtgaattattgttatattcacctcaaattttattttaaacacaaaaatcaaaacc 7488532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 16665857 - 16665930
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  16665857 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 16665930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 23932034 - 23932134
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| | ||||| || ||||||||| || ||||||||||||||| || |||||||||||  ||||||||  ||||| ||||||||||||    
T  23932034 tacacaaatatatctcccaatatcataaattaatgt-atattcacctcaaatcttcttttaaacacaaaaaccaaaaccctgtagaataagagatttagt 23932132  T
Q  113 tt 114  Q
    ||    
T  23932133 tt 23932134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 3034701 - 3034629
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||| || |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  3034701 aaatatacctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaac 3034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 41040411 - 41040339
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  41040411 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 41040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 27317722 - 27317637
Alignment:
Q  10 ttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacaca--aaagtcaaaacccaa 94  Q
    |||||| ||||||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||||||  ||| |||||||||||    
T  27317722 ttatacgcaaatatatctccaaatattatgaatttatgttaagttca-ctcaaatcttcttctaaacacatcaaaatcaaaacccaa 27317637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 9367725 - 9367672
Alignment:
Q  38 tgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  9367725 tgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 9367672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 13530843 - 13530920
Alignment:
Q  37 atgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||||||||||| |||||||||||| || || |||||||| || |||||||||  |||| |||||||||||||||    
T  13530843 atgaattaatgttatattcacctcaaatattcttttaaacacagaaatcaaaaccctgtagagaaagagatttagttt 13530920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 13533456 - 13533383
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  13533456 aaatatatctctaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 13533383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 17519670 - 17519597
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| || |||||||||||| || ||||||||||| ||||||||    
T  17519670 aaatatatctccaaatatcgtgaattaatgttatatttacctcaaatcttcttttaaacacaaaaatcaaaacc 17519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30824532 - 30824459
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| | |||||||  |||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  30824532 aaatatatttccaaatatcgtgaattaatgttatattcacctcaaatattattttaaacacaaaaatcaaaacc 30824459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 34074196 - 34074269
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||| ||| ||||||||||||||| || ||||||||||| ||||||||    
T  34074196 aaatatatctccaaatatcgtgaattaatgctatattcacctcaaatcttcttttaaacacaaaattcaaaacc 34074269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 52448581 - 52448645
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| |||||||||||    
T  52448581 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaa 52448645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 20352918 - 20352847
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||| || |||| ||||||    
T  20352918 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaagcataaaaatcaaaa 20352847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 27958334 - 27958264
Alignment:
Q  21 tatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||| |||||||  |||||||||||||| |||| |||||||||| || ||||||||||| ||||||||    
T  27958334 tatatctccaaatatcgtgaattaatgttatcttcatctcaaatcttcttttaaacacaaaaatcaaaacc 27958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 31291537 - 31291467
Alignment:
Q  21 tatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||| |||||||  |||||||||||||| |||||||||||| || || ||||||||||| ||||||||    
T  31291537 tatatctccaaatatcgtgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaaacc 31291467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 17519315 - 17519376
Alignment:
Q  53 ttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||||||||||| || ||||||||||| |||||||||  |||| |||||||||||||||    
T  17519315 ttcacctcaaatcttcttttaaacacaaaaatcaaaaccctgtagagaaagagatttagttt 17519376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35825699 - 35825772
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  35825699 aaatatatctcaaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaattaaaacc 35825772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 46718931 - 46718984
Alignment:
Q  38 tgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  46718931 tgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 46718984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 20342193 - 20342141
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttatt 70  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||||||    
T  20342193 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttatt 20342141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 49874938 - 49875009
Alignment:
Q  20 atatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| |||||||  ||||||||| |||| || |||||||||||| || ||||||||||| ||||||||    
T  49874938 atatatctccaaatatcgtgaattaatcttatattaacctcaaatcttcttttaaacacaaaaatcaaaacc 49875009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 20352585 - 20352628
Alignment:
Q  139 tagttatataaattgtctcactgtgtattattattataattatt 182  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||    
T  20352585 tagttatataaattgtcacactgtatattattattattattatt 20352628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 20785993 - 20785922
Alignment:
Q  20 atatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| |||||||  |||||||||||||| |||||| ||||| |||||  ||||| |||| ||||||||    
T  20785993 atatatctccaaatatcgtgaattaatgttatattcaccccaaatattatttgaaacagaaaaatcaaaacc 20785922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 16666155 - 16666110
Alignment:
Q  137 tttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||    
T  16666155 tttagttatataaattgtcacgctgtatattattattattattatt 16666110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 23932438 - 23932366
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||| || |||||| |  ||||||||||| ||||||||    
T  23932438 aaatatatctccaaatatcgtgaattaatgttatattcacatc-aatcttctattaaacacaaaaatcaaaacc 23932366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 30824268 - 30824305
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattat 175  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  30824268 ttagttatataaattgtcacactgtatattattattat 30824305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 4654452 - 4654408
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  4654452 ttagttatataaattgtcacgctgtatattattattattattatt 4654408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 7488774 - 7488730
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  7488774 ttagttatataaattgtcacgctgtatattattattattattatt 7488730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 8940728 - 8940684
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  8940728 ttagttatataaattgtcacgctgtatattattattattattatt 8940684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 9367457 - 9367501
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  9367457 ttagttatataaattgtcacgctgtatattattattattattatt 9367501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 23417881 - 23417925
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  23417881 ttagttatataaattgtcacgctgtatattattattattattatt 23417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 34074492 - 34074448
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| ||| || |||||||||||| ||||||    
T  34074492 ttagttatataaattgtcacaccgtatattattattattattatt 34074448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 72; Significance: 6e-33; HSPs: 3)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 4282 - 4389
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| || || |||||||||||||    
T  4282 tacacaaatatatctccaaatatcatgaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccctatggagaaagagatttagt 4381  T
Q  113 tttatcac 120  Q
    || |||||    
T  4382 ttcatcac 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 4695 - 4622
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  4695 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaattcaaaacc 4622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 4410 - 4454
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| ||| || |||||||||||| ||||||    
T  4410 ttagttatataaattgtcacaccgtatattattattattattatt 4454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 6e-33; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 6096443 - 6096336
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||    
T  6096443 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 6096344  T
Q  113 tttatcac 120  Q
    || |||||    
T  6096343 ttcatcac 6096336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 45407664 - 45407769
Alignment:
Q  15 cacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| || || |||||||||||||||    
T  45407664 cacaaatatatctccaaatatcatgaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccctatggagaaagagatttagttt 45407763  T
Q  115 tatcac 120  Q
     |||||    
T  45407764 catcac 45407769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 15881685 - 15881792
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  15881685 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 15881784  T
Q  113 tttatcac 120  Q
    || |||||    
T  15881785 ttcatcac 15881792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 18957023 - 18956916
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  18957023 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 18956924  T
Q  113 tttatcac 120  Q
    || |||||    
T  18956923 ttcatcac 18956916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 278352 - 278251
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  278352 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 278253  T
Q  113 tt 114  Q
    ||    
T  278252 tt 278251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 637500 - 637601
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  637500 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 637599  T
Q  113 tt 114  Q
    ||    
T  637600 tt 637601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 823303 - 823404
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  823303 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 823402  T
Q  113 tt 114  Q
    ||    
T  823403 tt 823404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 3703615 - 3703719
Alignment:
Q  16 acaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtttt 115  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| || || |||||||||||||||     
T  3703615 acaaatatatcttcaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctattgagaaagagatttagtttc 3703714  T
Q  116 atcac 120  Q
    |||||    
T  3703715 atcac 3703719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 30476423 - 30476530
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || |||||| |||| ||||| ||| ||||| |||||||||||||    
T  30476423 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacataaaaatcaaacccctatagagaaagagatttagt 30476522  T
Q  113 tttatcac 120  Q
    || |||||    
T  30476523 ttcatcac 30476530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 30555127 - 30555234
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| || || ||| |||||||||    
T  30555127 tacacaaatatatttccaaatatcatgaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccctatggagaaaaagatttagt 30555226  T
Q  113 tttatcac 120  Q
    || |||||    
T  30555227 ttcatcac 30555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 40618128 - 40618021
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||| |||||| || || ||||||||||| ||||||||| ||||| |||||||||||||    
T  40618128 tacacaaatatatctccaaatatcatgaattaatgttatgtacacttcaaatattcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 40618029  T
Q  113 tttatcac 120  Q
    || |||||    
T  40618028 ttcatcac 40618021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 42646955 - 42646848
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||||| || || ||||||||||| ||||||||| || || |||||||||||||    
T  42646955 tacacaaatatatctccaaatatcatgaattaatgttatgatcacctcaaattttcttttaaacacaaaaatcaaaaccctatggagaaagagatttagt 42646856  T
Q  113 tttatcac 120  Q
    || |||||    
T  42646855 ttcatcac 42646848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 41546469 - 41546363
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||| || ||||||||||| |||||| || ||||| |||||||||||||    
T  41546469 tacacaaatatatctccaaatatcatgaattaatattatattcacctcaaatcttcttttaaacacaaaaatcaaaatcctatagagaaagagatttagt 41546370  T
Q  113 tttatca 119  Q
    || ||||    
T  41546369 ttcatca 41546363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 18087950 - 18088047
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattta 110  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||| | |||||||||||    
T  18087950 tacacaaatatatctacaaatatcaagaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccctatatagaaagagattta 18088047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 40302862 - 40302963
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||  || | |||||||||||||    
T  40302862 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctgtacagaaagagatttagt 40302961  T
Q  113 tt 114  Q
    ||    
T  40302962 tt 40302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 36193016 - 36192933
Alignment:
Q  37 atgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  36193016 atgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagaaaaagagatttagtttcatcac 36192933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 39859577 - 39859471
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| || |||||||||||| ||||||||||||||| || ||||||||||| |||||||||  || | |||||||||||||    
T  39859577 tacacaaatatatctccaaatatcataaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctgtacagaaagagatttagt 39859478  T
Q  113 tttatca 119  Q
    || ||||    
T  39859477 ttcatca 39859471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 3851643 - 3851542
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||  |  || | |||||||||||||    
T  3851643 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaaatctgtacagaaagagatttagt 3851544  T
Q  113 tt 114  Q
    ||    
T  3851543 tt 3851542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 38059687 - 38059788
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| ||||| |||||||    
T  38059687 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaacccctatagagaaagatatttagt 38059786  T
Q  113 tt 114  Q
    ||    
T  38059787 tt 38059788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 41182851 - 41182950
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| |||  |||| |||||||||||||    
T  41182851 tacacaaatttatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctctagagaaagagatttagt 41182950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 13139756 - 13139857
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||| |||   ||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||  |||| |||||||||||||    
T  13139756 tacacaaatatttctgacaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctttagagaaagagatttagt 13139855  T
Q  113 tt 114  Q
    ||    
T  13139856 tt 13139857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 44257301 - 44257374
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  44257301 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 44257374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 44257709 - 44257608
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || |||||||||||  |||| ||| ||| ||||| | |||||||    
T  44257709 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaaccaaacccctataaaaaaaaaaatttagt 44257610  T
Q  113 tt 114  Q
    ||    
T  44257609 tt 44257608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 4621935 - 4622041
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| ||||||||||||||| |||| ||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  4621935 tacacaaatatatctcaaaatatcatgaattaatgttatattcatctcaaatattcttttaaacacaaaa-tcaaacccctatagagaaagagatttagt 4622033  T
Q  113 tttatcac 120  Q
    || |||||    
T  4622034 ttcatcac 4622041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 16097227 - 16097120
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||| ||||||| || || |||||| |||| ||||| ||  ||||| |||||||||||||    
T  16097227 tacacaaatatatctccaaatatcatgaattaatgttatattcatctcaaatattcttttaaacataaaaatcaaacccttatagagaaagagatttagt 16097128  T
Q  113 tttatcac 120  Q
    || |||||    
T  16097127 ttcatcac 16097120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 32058092 - 32058013
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc 92  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  32058092 tacacaaatatatctcaaaatatcatgaatttatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccc 32058013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 15882089 - 15882016
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  15882089 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 15882016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 18956612 - 18956685
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  18956612 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 18956685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30476846 - 30476773
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  30476846 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 30476773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 42737146 - 42737065
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattta 110  Q
    ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| |||||  ||||||||||    
T  42737146 caaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagaggaagagattta 42737065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 23345617 - 23345707
Alignment:
Q  30 aaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    |||||| |||||||||||||||  ||| |||||||||| || ||||||||||| ||||| ||| ||||| ||||||||||||||| |||||    
T  23345617 aaatatcatgaattaatgttatactcatctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagtttcatcac 23345707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 13140188 - 13140115
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  13140188 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 13140115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 16096908 - 16096981
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  16096908 aaatatatctctaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 16096981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 23346002 - 23345929
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  23346002 aaatatatctctaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 23345929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 36192641 - 36192714
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||| |||||||||||||| |||||||||||| || || ||||||||||| ||||||||    
T  36192641 aaatatatctccaaatattgtgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaaacc 36192714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 41183215 - 41183142
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| | ||||||    
T  41183215 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaattaaaacc 41183142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 42646554 - 42646627
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  42646554 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaattcaaaacc 42646627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 38060077 - 38060006
Alignment:
Q  21 tatatcttcaaatattatgaattaa-tgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||||||||  |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  38060077 tatatcttcaaatatcgtgaattaaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 38060006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 26965816 - 26965870
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatctt 67  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  26965816 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatctt 26965870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 6096034 - 6096107
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||| ||||||||| || ||||||||||| ||||||||    
T  6096034 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttcttttaaacacaaaaatcaaaacc 6096107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 18088399 - 18088326
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||| |||||| || ||||||||||| ||||||||    
T  18088399 aaatatatctccaaatatcgtgaattaatgttatattcacctctaatcttcttttaaacacaaaaatcaaaacc 18088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 277962 - 278034
Alignment:
Q  18 aaatatatcttcaaatattatgaattaa-tgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  277962 aaatatatctccaaatatcgtgaattaaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaa 278034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 637890 - 637818
Alignment:
Q  18 aaatatatcttcaaatattatgaattaa-tgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  637890 aaatatatctccaaatatcgtgaattaaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaa 637818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 823693 - 823621
Alignment:
Q  18 aaatatatcttcaaatattatgaattaa-tgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  823693 aaatatatctccaaatatcgtgaattaaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaa 823621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 43694039 - 43693975
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || |||||||||||    
T  43694039 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaa 43693975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 40303254 - 40303183
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||||||||| ||||||| ||||||| || ||||||||||| ||||||    
T  40303254 aaatatatctccaaatatcgtgaattaatgttatattcacctaaaatcttcttttaaacacaaaaatcaaaa 40303183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 30088669 - 30088608
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||| || ||||  |||||||||||||||||||||| |||||||||||||| |||||||    
T  30088669 caaatatcataaatttttgttatgttcacctcaaatctttttctaaacacaaaaatcaaaac 30088608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30555537 - 30555464
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||| | ||||||||||||||| || |||| |||||| ||||||||    
T  30555537 aaatatatctccaaatatcgtgaattaatgttgtattcacctcaaatcttcttttaaagacaaaattcaaaacc 30555464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 39859177 - 39859250
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||| |||| || || ||||||||||| ||||||||    
T  39859177 aaatatatctccaaatatcgtgaattaatgttatattcacctaaaatattcttttaaacacaaaaatcaaaacc 39859250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 41546070 - 41546143
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| | |||||||  |||||||||||||| ||||||||||||||| || |||||||||||  |||||||    
T  41546070 aaatatatttccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaaacaaaacc 41546143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 42736762 - 42736823
Alignment:
Q  21 tatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    ||||||| |||||||  |||||||||||||| ||||||||||||||| || |||||||||||    
T  42736762 tatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaa 42736823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 45408074 - 45408005
Alignment:
Q  22 atatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||| |||||||  |||||||| ||||| ||||||||||||||| || ||||||||||| ||||||||    
T  45408074 atatctccaaatatcgtgaattaacgttatattcacctcaaatcttcttttaaacacaaaattcaaaacc 45408005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 40617717 - 40617789
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||  ||||||  ||||||| |||||| ||||||||||||||| || ||||||||||| |||||||    
T  40617717 aaatatatctcaaaatatcgtgaattagtgttatattcacctcaaatcttcttttaaacacaaaaatcaaaac 40617789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 3851222 - 3851295
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||| ||||||||||| || |||||| |||| ||||||||    
T  3851222 aaatatatctcaaaatatcgtgaattaatgttatattctcctcaaatctttttttaaacataaaaatcaaaacc 3851295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 30476541 - 30476584
Alignment:
Q  139 tagttatataaattgtctcactgtgtattattattataattatt 182  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||    
T  30476541 tagttatataaattgtcacactgtatattattattattattatt 30476584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 18088066 - 18088110
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| ||| || |||||||||||| ||||||    
T  18088066 ttagttatataaattgtcacaccgtatattattattattattatt 18088110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 41182976 - 41183020
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  41182976 ttagttatataaattgtcacgctgtatattattattattattatt 41183020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 41546352 - 41546308
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  41546352 ttagttatataaattgtcacgctgtatattattattattattatt 41546308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 45407787 - 45407831
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| ||| || |||||||||||| ||||||    
T  45407787 ttagttatataaattgtcacaccgtatattattattattattatt 45407831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 6e-33; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 17286749 - 17286856
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||    
T  17286749 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 17286848  T
Q  113 tttatcac 120  Q
    || |||||    
T  17286849 ttcatcac 17286856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 38180100 - 38180207
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||| ||||| |||||||||||||    
T  38180100 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaacccctatagagaaagagatttagt 38180199  T
Q  113 tttatcac 120  Q
    || |||||    
T  38180200 ttcatcac 38180207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 46934681 - 46934788
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||| || || ||||||||||| ||||||||| ||||| |||||||||||||    
T  46934681 tacacaaatatatctccaaatatcatgaattaatgttatgttcacctcaaattttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 46934780  T
Q  113 tttatcac 120  Q
    || |||||    
T  46934781 ttcatcac 46934788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 723933 - 724040
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||| |||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||| ||||| |||||||||||||    
T  723933 tacataaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaacccctatagagaaagagatttagt 724032  T
Q  113 tttatcac 120  Q
    || |||||    
T  724033 ttcatcac 724040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 4657452 - 4657563
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatt 108  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||    
T  4657452 tttatacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaacccctatagagaaagagatt 4657551  T
Q  109 tagttttatcac 120  Q
    |||||| |||||    
T  4657552 tagtttcatcac 4657563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 20121936 - 20121829
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||  ||||| |||||||||||||    
T  20121936 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaacccttatagagaaagagatttagt 20121837  T
Q  113 tttatcac 120  Q
    || |||||    
T  20121836 ttcatcac 20121829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 41856724 - 41856831
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||  ||||| |||||||||||||    
T  41856724 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaacccttatagagaaagagatttagt 41856823  T
Q  113 tttatcac 120  Q
    || |||||    
T  41856824 ttcatcac 41856831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 44457349 - 44457456
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  44457349 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 44457448  T
Q  113 tttatcac 120  Q
    || |||||    
T  44457449 ttcatcac 44457456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 47907390 - 47907497
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  47907390 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 47907489  T
Q  113 tttatcac 120  Q
    || |||||    
T  47907490 ttcatcac 47907497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 48950676 - 48950783
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||  || ||||| |||||||||||||    
T  48950676 tacacaaatatatcttcaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaactcctatagagaaagagatttagt 48950775  T
Q  113 tttatcac 120  Q
    || |||||    
T  48950776 ttcatcac 48950783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 41337929 - 41337828
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  41337929 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 41337830  T
Q  113 tt 114  Q
    ||    
T  41337829 tt 41337828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 3413115 - 3413222
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  3413115 tacacaaatatatctccaaatatcatgaaataatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 3413214  T
Q  113 tttatcac 120  Q
    || |||||    
T  3413215 ttcatcac 3413222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 23592959 - 23593066
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| || ||||||||||  ||||||||| || || |||||||||||||    
T  23592959 tacacaaatatatctccaaatatgacgaattaatgttatgttcacctcaaatcttcttttaaacacaaatatcaaaaccctatggagaaagagatttagt 23593058  T
Q  113 tttatcac 120  Q
    || |||||    
T  23593059 ttcatcac 23593066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 40014075 - 40014182
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||| | |||||||||||||    
T  40014075 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatatagaaagagatttagt 40014174  T
Q  113 tttatcac 120  Q
    || |||||    
T  40014175 ttcatcac 40014182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 17961926 - 17962033
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| || | ||  ||||| ||||||||| || || |||||||||||||    
T  17961926 tacacaaatatatctccaaatatcatgaattaatgttatgttcacctcaaatcttctttttaatgcaaaaatcaaaaccccatggagaaagagatttagt 17962025  T
Q  113 tttatcac 120  Q
    || |||||    
T  17962026 ttcatcac 17962033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 33245047 - 33245154
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| ||||| |||||||    
T  33245047 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagagaaagatatttagt 33245146  T
Q  113 tttatcac 120  Q
    || |||||    
T  33245147 ttcatcac 33245154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 46001449 - 46001348
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||  |||| ||||| |||||||    
T  46001449 tacacaaatatatctcccaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctgtagagaaagaaatttagt 46001350  T
Q  113 tt 114  Q
    ||    
T  46001349 tt 46001348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 13931065 - 13931144
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc 92  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  13931065 tacacaaatatatcttaaaatatcatgaatttatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccc 13931144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 47505325 - 47505227
Alignment:
Q  14 acacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtt 113  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| |||||| || ||| ||||||||||||||| | || || ||||||||||||||    
T  47505325 acacaaatatatctccaaatatcatgaattaatgttatgttcacctc-aatcttcttttaatcacaaaagtcaaaactctatggagaaagagatttagtt 47505227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 724335 - 724262
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  724335 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 724262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 18994047 - 18993974
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  18994047 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 18993974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 41288605 - 41288706
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||| ||||||| ||||||| ||||||||||||||| ||||| ||||||||| || ||||||||||| |||||||||  || | |||||||||||||    
T  41288605 tacacaattatatctccaaatatcatgaattaatgttatattcacatcaaatcttcttttaaacacaaaaatcaaaaccctgtacagaaagagatttagt 41288704  T
Q  113 tt 114  Q
    ||    
T  41288705 tt 41288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 19233097 - 19233021
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||||||| ||||||    
T  19233097 tacacaaatatatctccaaatatcatgaattaatgttatgttcacatcaaatcttcttttaaacacaaaaatcaaaa 19233021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 21816979 - 21816872
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||| | ||||||| ||||||||||||||| |||| ||||||| || || ||||||||||| ||||| |||  |||| |||||||||||||    
T  21816979 tacacaaatatatatccaaatatcatgaattaatgttatattcaactcaaatattcttttaaacacaaaaatcaaacccctgtagagaaagagatttagt 21816880  T
Q  113 tttatcac 120  Q
    || |||||    
T  21816879 ttcatcac 21816872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 46553887 - 46553993
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||| |||||||||| || ||||||||||| || ||| || ||||| ||||| |||||||    
T  46553887 tacacaaatatatctccaaatatcatgaattaatgttatattcatctcaaatcttcttttaaacacaaaaatc-aaatcctatagagaaagatatttagt 46553985  T
Q  113 tttatcac 120  Q
    || |||||    
T  46553986 ttcatcac 46553993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 4657905 - 4657832
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||    
T  4657905 aaatatatcttcaaatatcgtgaattaatgttatattcacctaaaatcttattttaaacacaaaaatcaaaacc 4657832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 41337499 - 41337572
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  41337499 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 41337572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 44457766 - 44457693
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  44457766 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 44457693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 44883932 - 44884005
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  44883932 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 44884005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 44884379 - 44884278
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||   ||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||   | ||||| |||||||||||||    
T  44884379 tacacaaatatatctcagaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacatctatagagaaagagatttagt 44884280  T
Q  113 tt 114  Q
    ||    
T  44884279 tt 44884278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 48606039 - 48606124
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||||||||||||| || |||||||| || |||||||||  |||| |||||||||||||||    
T  48606039 caaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacataaatcaaaaccctgtagagaaagagatttagttt 48606124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 8391882 - 8391958
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| || || |||||||| ||||||    
T  8391882 tacacaaatatatctccaaatatcatgaattaatgttatgttcacatcaaatcttcttttagacacaaaaatcaaaa 8391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 21737063 - 21736961
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttat 117  Q
    |||||||||| ||||||| | ||||||||||||   ||||||||||||||  | ||||||||||| ||||||||| || || ||||||||||||||| ||    
T  21737063 aaatatatctacaaatatcacgaattaatgttaaaatcacctcaaatcttcctttaaacacaaaaatcaaaaccctatggagaaagagatttagtttcat 21736964  T
Q  118 cac 120  Q
    |||    
T  21736963 cac 21736961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 48951077 - 48951003
Alignment:
Q  17 caaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||| |||||||  |||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||    
T  48951077 caaatatatctccaaatatcgtgaattaatgttatattcaccccaaatcttattttaaacacaaaaatcaaaacc 48951003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 23593375 - 23593302
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| |||||||| |||||| || ||||||||||| ||||||||    
T  23593375 aaatatatcttcaaatatcgtgaattaatgttatattcacctctaatcttgttttaaacacaaaattcaaaacc 23593302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 40014481 - 40014408
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  40014481 aaatatatctcaaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 40014408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 46001038 - 46001111
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  46001038 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 46001111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 46554286 - 46554213
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||| |||||||||||||| | |||||||||||||||| ||||||||||  ||||||||    
T  46554286 aaatatatctccaaatattgtgaattaatgttatatccacctcaaatcttattttaaacacaaatatcaaaacc 46554213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 47907799 - 47907726
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| |||| |||||| ||||||||    
T  47907799 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaatacaaaaatcaaaacc 47907726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 21816595 - 21816667
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  21816595 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 21816667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 33245433 - 33245362
Alignment:
Q  19 aatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  33245433 aatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 33245362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 39982780 - 39982702
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacct--caaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||  |||||||| || ||||||||||| ||||||    
T  39982780 tacacaaatatatcttcaaatatcatgaatttatgttatgttcatctcacaaatctttttttaaacacaaaaatcaaaa 39982702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 9659819 - 9659896
Alignment:
Q  37 atgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||||||||||| |||||||||||| || || |||||||| || |||||||||  |||| |||||||||||||||    
T  9659819 atgaattaatgttatattcacctcaaatattcttttaaacacagaaatcaaaaccctgtagagaaagagatttagttt 9659896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 9662432 - 9662359
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  9662432 aaatatatctctaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 9662359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 21736649 - 21736722
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  21736649 aaatatatctcaaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 21736722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 48606424 - 48606351
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||| || || ||||||||||| ||||||||    
T  48606424 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaaacc 48606351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 20121536 - 20121608
Alignment:
Q  19 aatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||| ||||||   |||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  20121536 aatatatctccaaataacgtgaattaatgttatattcacatcaaatcttattttaaacacaaaaatcaaaacc 20121608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 41857124 - 41857052
Alignment:
Q  19 aatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||| ||||||   |||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  41857124 aatatatctccaaataacgtgaattaatgttatattcacatcaaatcttattttaaacacaaaaatcaaaacc 41857052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 46935079 - 46935007
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| | ||||| ||||||||||||||| |||| |||||||||| || ||||||||||| |||||||    
T  46935079 aaatatatctccgaatatcatgaattaatgttatattcatctcaaatctttttttaaacacaaaaatcaaaac 46935007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 41288993 - 41288922
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || | ||||||||| ||||||    
T  41288993 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttctttttaacacaaaattcaaaa 41288922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 8392291 - 8392218
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || |||  |||||| ||||||||    
T  8392291 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaagtacaaaaatcaaaacc 8392218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 44520898 - 44520825
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| |||||||||||| || || ||||||||||| ||||||||    
T  44520898 aaatatatctctaaatatcgtgaattaatgttatattcacctcaaatattcttttaaacacaaaattcaaaacc 44520825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 47504803 - 47504876
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||| |||||||| || || ||||||||||| ||||||||    
T  47504803 aaatatatctccaaatatcgtgaattaatgttatattcgcctcaaattttcttttaaacacaaaattcaaaacc 47504876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 3413514 - 3413462
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttatt 70  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||||||    
T  3413514 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttatt 3413462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 37666162 - 37666084
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||||||| || |||  | ||||| || || ||||||||| ||||||||||||||  |||||||    
T  37666162 tacacaaatacatcttcaaatatcattaatctacgttatatttacatcaaatctttttctaaacacaaaaaccaaaacc 37666084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 35214405 - 35214333
Alignment:
Q  15 cacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc 92  Q
    ||||||||||||||||||||| ||||||     |||| ||||| ||||||||| |||||||| ||||| | |||||||    
T  35214405 cacaaatatatcttcaaatatcatgaat-----ttatattcacttcaaatcttcttctaaacccaaaaattaaaaccc 35214333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 44520613 - 44520658
Alignment:
Q  137 tttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    ||||||||||||||||||| ||| || |||||||||||| ||||||    
T  44520613 tttagttatataaattgtcacaccgtatattattattattattatt 44520658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 724050 - 724094
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  724050 ttagttatataaattgtcacgctgtatattattattattattatt 724094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 17286877 - 17286921
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  17286877 ttagttatataaattgtcacgctgtatattattattattattatt 17286921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 23593085 - 23593129
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| ||| || |||||||||||| ||||||    
T  23593085 ttagttatataaattgtcacaccgtatattattattattattatt 23593129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 38180216 - 38180260
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  38180216 ttagttatataaattgtcacgctgtatattattattattattatt 38180260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 41337814 - 41337770
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  41337814 ttagttatataaattgtcacgctgtatattattattattattatt 41337770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 44884264 - 44884220
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  44884264 ttagttatataaattgtcacgctgtatattattattattattatt 44884220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 6e-33; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 11986218 - 11986111
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||    
T  11986218 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 11986119  T
Q  113 tttatcac 120  Q
    || |||||    
T  11986118 ttcatcac 11986111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 39590333 - 39590222
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatt 108  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| |||||||||||||||    
T  39590333 tttatacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaacccctatagaaaaagagatt 39590234  T
Q  109 tagttttatcac 120  Q
    |||||| |||||    
T  39590233 tagtttcatcac 39590222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 9985780 - 9985887
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||||||| ||| ||||| || || |||||||||||||    
T  9985780 tacacaaatatatcttcaaatatcatgaattaatgttatgttcacctcaaatattcttttaaacacaaaaatcagaaccctatggagaaagagatttagt 9985879  T
Q  113 tttatcac 120  Q
    || |||||    
T  9985880 ttcatcac 9985887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 19504678 - 19504571
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||| || ||||| |||||||||||||    
T  19504678 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaatcctatagagaaagagatttagt 19504579  T
Q  113 tttatcac 120  Q
    || |||||    
T  19504578 ttcatcac 19504571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 27552357 - 27552250
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | || ||||||||||| ||||||||| || || |||||||||||||    
T  27552357 tacacaaatatatctccaaatatcatgaattaatgttatgttcacctcaaatcatcttttaaacacaaaaatcaaaaccctatggagaaagagatttagt 27552258  T
Q  113 tttatcac 120  Q
    || |||||    
T  27552257 ttcatcac 27552250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 30129069 - 30129176
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  30129069 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 30129168  T
Q  113 tttatcac 120  Q
    ||||||||    
T  30129169 tttatcac 30129176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 11078064 - 11077956
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgt--tatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattta 110  Q
    ||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||| ||||||||| |||| |||||| || ||||| |||||||||||    
T  11078064 tacacaaatatatcttcaaatatcatgaattaatatattatgttcacctcaaatcttcttctaaacataaaaatcaaaatcctatagagaaagagattta 11077965  T
Q  111 gttttatca 119  Q
    |||||||||    
T  11077964 gttttatca 11077956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 9593458 - 9593351
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  9593458 tacacaactatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 9593359  T
Q  113 tttatcac 120  Q
    || |||||    
T  9593358 ttcatcac 9593351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 12501033 - 12500922
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatt 108  Q
    ||||||||||||||||||| ||||||| || |||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||    
T  12501033 tttatacacaaatatatctccaaatatcataaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatt 12500934  T
Q  109 tagttttatcac 120  Q
    || ||| |||||    
T  12500933 taatttcatcac 12500922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 27018574 - 27018681
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  27018574 tacacaaatatatcttcaaatatcatgaattaacgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 27018673  T
Q  113 tttatcac 120  Q
    || |||||    
T  27018674 ttcatcac 27018681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 31547889 - 31547996
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| |||| |||||||||||||||||||||||||| || ||||||||||| ||||||||  | |||||||||||||||||    
T  31547889 tacacaaatatatctcaaaatatcatgagttaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccttacagaaaaagagatttagt 31547988  T
Q  113 tttatcac 120  Q
    || |||||    
T  31547989 ttcatcac 31547996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 19666243 - 19666142
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  19666243 tacacaaacatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 19666144  T
Q  113 tt 114  Q
    ||    
T  19666143 tt 19666142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 20544640 - 20544741
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  20544640 tacacaaatatatctccaaatatcatgaattaatattatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 20544739  T
Q  113 tt 114  Q
    ||    
T  20544740 tt 20544741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 823270 - 823370
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||| ||||||||    
T  823270 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagggatttagt 823369  T
Q  113 t 113  Q
    |    
T  823370 t 823370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 37938934 - 37939041
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| |||||| || || ||||||||||| ||||| | | ||||| ||||| |||||||    
T  37938934 tacacaaatatatcttcaaatatcatgaattaatgttatattcacatcaaatattcttttaaacacaaaaatcaaaccgctatagagaaagatatttagt 37939033  T
Q  113 tttatcac 120  Q
    || |||||    
T  37939034 ttcatcac 37939041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 42610359 - 42610466
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||| ||||||||||  |||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  42610359 tacataaatatatctcaaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 42610458  T
Q  113 tttatcac 120  Q
    || |||||    
T  42610459 ttcatcac 42610466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 7180080 - 7180190
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaat---gttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattt 109  Q
    ||||||||||||||| ||||||| ||||||||||   ||||||||||||||||||||| || ||||||||||| ||||||| | || || ||||||||||    
T  7180080 tacacaaatatatctccaaatatcatgaattaataatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaacactatggagaaagagattt 7180179  T
Q  110 agttttatcac 120  Q
     |||| |||||    
T  7180180 ggtttcatcac 7180190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 823669 - 823596
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||| |||||| ||||||||    
T  823669 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaaatcttattttaaaaacaaaaatcaaaacc 823596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 34401812 - 34401727
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||  | || |||||||||||||||    
T  34401812 caaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctgtggagaaagagatttagttt 34401727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 42610764 - 42610691
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  42610764 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 42610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 39589907 - 39589978
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  39589907 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaa 39589978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 744525 - 744594
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    |||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  744525 tacataaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaa 744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7180514 - 7180441
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  7180514 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaattcaaaacc 7180441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 11985833 - 11985906
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  |||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  11985833 aaatatatctcaaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 11985906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 12500587 - 12500660
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||    
T  12500587 aaatatatctccaaatatcgtgaattaatgatatattcacctcaaatcttattttaaacacaaaaatcaaaacc 12500660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 31481076 - 31481153
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||||| | ||||||| || ||||  |||||||||||||||||||||| |||||||||||||| |||||||    
T  31481076 tacacaaatatatgtccaaatatcataaatttttgttatgttcacctcaaatcttcttctaaacacaaaaatcaaaac 31481153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 37272327 - 37272243
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| |||||| |||||||| || ||||||||||| ||||||||| |||| | ||||||||||||||    
T  37272327 caaatatcatgaattaatgttatattcaccccaaatcttcttttaaacacaaaaatcaaaaccccatag-agaagagatttagttt 37272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 37939333 - 37939260
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||    
T  37939333 aaatatatctccaaatatcgtgaattaatgttatattcatctcaaatcttattttaaacacaaaaatcaaaacc 37939260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 41408522 - 41408599
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||||| | ||||||| |||| ||  ||||||||||||| |||||||| ||||||||||||||||||||||    
T  41408522 tacacaaatatatgtccaaatatcatgattttttgttatgttcaccacaaatcttcttctaaacacaaaagtcaaaac 41408599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 1833552 - 1833475
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||||| | ||||||| |||| ||  ||||||||||||| |||||||| |||||||||||||| |||||||    
T  1833552 tacacaaatatatgtccaaatatcatgattttttgttatgttcaccacaaatcttcttctaaacacaaaaatcaaaac 1833475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 9986194 - 9986121
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||| || || ||||||||||| ||||||||    
T  9986194 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaattttcttttaaacacaaaattcaaaacc 9986121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27551930 - 27552003
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  27551930 aaatatatctcaaaatatcgtgaattaatgttattttcacctcaaatcttcttttaaacacaaaattcaaaacc 27552003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 40319018 - 40318941
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||||| | ||||||| |||| ||  ||||||||||||| |||||||| |||||||||||||| |||||||    
T  40319018 tacacaaatatatgtccaaatatcatgattttttgttatgttcaccacaaatcttcttctaaacacaaaaatcaaaac 40318941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 9593011 - 9593062
Alignment:
Q  40 aattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  9593011 aattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 9593062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 25654110 - 25654189
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc 92  Q
    |||| |||||| ||| ||||||| ||| ||| |||||||||||| |||||||||| |||||||||||||| | |||||||    
T  25654110 tacataaatatgtctccaaatatcatggatttatgttatgttcatctcaaatcttcttctaaacacaaaaattaaaaccc 25654189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 19666087 - 19666145
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaac 76  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| |||||    
T  19666087 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaac 19666145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 31551001 - 31550928
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  ||||||||||| || ||||||||||||||| || |||||| |||| ||||||||    
T  31551001 aaatatatctccaaatatcgtgaattaatgtaatattcacctcaaatcttcttttaaacataaaattcaaaacc 31550928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 9532086 - 9532010
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||||||||||||| ||||||| ||||||| ||| |||||| | || ||||||| || ||||||||||| ||||||    
T  9532086 tacacaaatatatctccaaatatcatgaatttatgctatgtttaacttaaatcttcttataaacacaaaaatcaaaa 9532010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 27018938 - 27018886
Alignment:
Q  38 tgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  27018938 tgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 27018886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 37271918 - 37271989
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| ||||| |  |||||||||||||| |||| |||||||||| || ||||||||||| ||||||    
T  37271918 aaatatatctccaaatctcgtgaattaatgttatattcatctcaaatcttcttttaaacacaaaaatcaaaa 37271989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 20545038 - 20544960
Alignment:
Q  18 aaatatatcttcaaatattatgaatt-aatgttatgt----tcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||| |||||||| |    ||||||||||||||||| ||||||||||| ||||||||    
T  20545038 aaatatatcttcaaatatcgtgaattgaatgttatatatattcacctcaaatcttattttaaacacaaaaatcaaaacc 20544960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 9531639 - 9531699
Alignment:
Q  14 acacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaa 74  Q
    ||||||||||||||  |||||||||||||| |||||||||| || | ||||||| ||||||    
T  9531639 acacaaatatatctctaaatattatgaatttatgttatgtttacattaaatcttcttctaa 9531699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 15421434 - 15421486
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttatt 70  Q
    |||||||||| ||||||   |||||||||||||| ||||||||||||||||||    
T  15421434 aaatatatctccaaataccgtgaattaatgttatcttcacctcaaatcttatt 15421486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 9593337 - 9593293
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  9593337 ttagttatataaattgtcacgctgtatattattattattattatt 9593293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 9985910 - 9985954
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| ||| || |||||||||||| ||||||    
T  9985910 ttagttatataaattgtcacaccgtatattattattattattatt 9985954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 12500914 - 12500870
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  12500914 ttagttatataaattgtcacgctgtatattattattattattatt 12500870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 18763581 - 18763474
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||    
T  18763581 tacaccaatatatctccaaatattatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 18763482  T
Q  113 tttatcac 120  Q
    || |||||    
T  18763481 ttcatcac 18763474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 27127779 - 27127672
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| |||||||||||||||||||    
T  27127779 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagaaaaagagatttagt 27127680  T
Q  113 tttatcac 120  Q
    || |||||    
T  27127679 ttcatcac 27127672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 37218615 - 37218719
Alignment:
Q  16 acaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtttt 115  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||  || |||||||||||||||||||||     
T  37218615 acaaatatatcttcaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaactcctatagaaaaagagatttagtttc 37218714  T
Q  116 atcac 120  Q
    |||||    
T  37218715 atcac 37218719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 27330371 - 27330478
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  27330371 tacacaaatatatcatcaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 27330470  T
Q  113 tttatcac 120  Q
    || |||||    
T  27330471 ttcatcac 27330478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 40907749 - 40907642
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  40907749 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaatccctatagagaaagagatttagt 40907650  T
Q  113 tttatcac 120  Q
    || |||||    
T  40907649 ttcatcac 40907642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 41103333 - 41103226
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  41103333 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 41103234  T
Q  113 tttatcac 120  Q
    || |||||    
T  41103233 ttcatcac 41103226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 44841643 - 44841750
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  44841643 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 44841742  T
Q  113 tttatcac 120  Q
    || |||||    
T  44841743 ttcatcac 44841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 50546925 - 50547032
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  50546925 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 50547024  T
Q  113 tttatcac 120  Q
    || |||||    
T  50547025 ttcatcac 50547032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 2219588 - 2219478
Alignment:
Q  10 ttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattt 109  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| ||||||||||    
T  2219588 ttatacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagagaaagagattt 2219489  T
Q  110 agttttatcac 120  Q
    ||||| |||||    
T  2219488 agtttcatcac 2219478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 10826196 - 10826302
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| || ||||||||||| ||||||||  ||||| |||||||||||||    
T  10826196 tacacaaaaatatcttcaaatatcatgaattaatgttatgttcacatcaaatcttcttttaaacacaaaaatcaaaaccttatagagaaagagatttagt 10826295  T
Q  113 tttatca 119  Q
    || ||||    
T  10826296 ttcatca 10826302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 22606452 - 22606346
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  22606452 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaattcaaacccctatagagaaagagatttagt 22606353  T
Q  113 tttatca 119  Q
    || ||||    
T  22606352 ttcatca 22606346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 30041895 - 30041995
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  30041895 tacacaaatatatcttcaaatatgatgaattaatattatattcacctcaaatcttcttttaaacacaaaaatcaaatccctatagagaaagagatttagt 30041994  T
Q  113 t 113  Q
    |    
T  30041995 t 30041995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 8850220 - 8850327
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||| ||||||||    
T  8850220 tacacaaatatatcttcaaatgtcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagggatttagt 8850319  T
Q  113 tttatcac 120  Q
    || |||||    
T  8850320 ttcatcac 8850327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 16010414 - 16010307
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||  ||||| |||||||||||||    
T  16010414 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatctttttttaaacacaaaaatcaaacccatatagagaaagagatttagt 16010315  T
Q  113 tttatcac 120  Q
    || |||||    
T  16010314 ttcatcac 16010307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 23021381 - 23021274
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| || || |||||||||||||    
T  23021381 tacacaaatatatctacaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctattgagaaagagatttagt 23021282  T
Q  113 tttatcac 120  Q
    || |||||    
T  23021281 ttcatcac 23021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 30362055 - 30362162
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| |||||||||||||||||||| |||||||||| || ||||||||||| ||||||||| || || |||||||||||||    
T  30362055 tacacaaatatatctcaaaatatcatgaattaatgttatgttcatctcaaatcttcttttaaacacaaaaatcaaaaccctatggagaaagagatttagt 30362154  T
Q  113 tttatcac 120  Q
    || |||||    
T  30362155 ttcatcac 30362162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 45172326 - 45172219
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||| ||    
T  45172326 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttggt 45172227  T
Q  113 tttatcac 120  Q
    || |||||    
T  45172226 ttcatcac 45172219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 52746095 - 52746206
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatctt-attctaaacacaaaagtcaaaacccaatagaaaaagagat 107  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  || ||||||||||| ||||| ||| ||||| ||||||||    
T  52746095 tttatacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttctttttaaacacaaaaatcaaacccctatagagaaagagat 52746194  T
Q  108 ttagttttatca 119  Q
    ||||||| ||||    
T  52746195 ttagtttcatca 52746206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 15083162 - 15083268
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  15083162 tacacaaacatatcttcaaatatcatgaattaatgttatattcacatcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 15083261  T
Q  113 tttatca 119  Q
    || ||||    
T  15083262 ttcatca 15083268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 31312113 - 31312214
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||  ||| ||||||| |||||||    
T  31312113 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccatatacaaaaagatatttagt 31312212  T
Q  113 tt 114  Q
    ||    
T  31312213 tt 31312214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 3891158 - 3891266
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc-aatagaaaaagagatttag 111  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| | | || ||||||||||||    
T  3891158 tacacaaatatatctccaaatatcatgaattaatgttatgttcccctcaaatcttcttttaaacacaaaaatcaaaaccctattggagaaagagatttag 3891257  T
Q  112 ttttatcac 120  Q
    ||| |||||    
T  3891258 tttcatcac 3891266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 37180471 - 37180575
Alignment:
Q  16 acaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtttt 115  Q
    |||||||||| | ||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||| ||||||||| || || |||||||||||||||     
T  37180471 acaaatatatttacaaatatcatgaatgaatgttacgttcacctcaaatcttattttaaacacaaaaatcaaaaccctatggagaaagagatttagtttc 37180570  T
Q  116 atcac 120  Q
    |||||    
T  37180571 atcac 37180575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 45052164 - 45052271
Alignment:
Q  12 atacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttag 111  Q
    ||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||| || ||||||||||| || |||||| ||||| ||||||||||||    
T  45052164 atacacaaatatatctcaaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatc-aaaccctatagagaaagagatttag 45052262  T
Q  112 ttttatcac 120  Q
    ||| |||||    
T  45052263 tttcatcac 45052271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 18411726 - 18411619
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || |||| |||||| ||||| ||| ||||| |||||||||||||    
T  18411726 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaatacaaaaatcaaacccctatagagaaagagatttagt 18411627  T
Q  113 tttatcac 120  Q
    || |||||    
T  18411626 ttcatcac 18411619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 30438685 - 30438792
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| | ||| ||||| |||||||    
T  30438685 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctacagagaaagaaatttagt 30438784  T
Q  113 tttatcac 120  Q
    || |||||    
T  30438785 ttcatcac 30438792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 37786992 - 37786886
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| || |||||| ||||| |||||||||||||    
T  37786992 tacacaaacatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatc-aaaccctatagagaaagagatttagt 37786894  T
Q  113 tttatcac 120  Q
    || |||||    
T  37786893 ttcatcac 37786886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 42827594 - 42827500
Alignment:
Q  20 atatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||| || ||||||||||| ||||||||| | ||| |||||||||||||||    
T  42827594 atatatcttcaaatatcatgaattgatgttatgttcacctccaatcttcttttaaacacaaaaatcaaaaccctacagagaaagagatttagttt 42827500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 41696524 - 41696625
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| |||||  || ||||||||||| |||||||    
T  41696524 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaactcctatagaaaaagatatttagt 41696623  T
Q  113 tt 114  Q
    ||    
T  41696624 tt 41696625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 11123251 - 11123145
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| |||||||||| |||| ||||||||||||||| || ||||||||||| || |||||| ||||| |||||||||||||    
T  11123251 tacacaaatatatctcaaaatatcatgaattaatattatattcacctcaaatcttcttttaaacacaaaaatc-aaaccctatagagaaagagatttagt 11123153  T
Q  113 tttatcac 120  Q
    || |||||    
T  11123152 ttcatcac 11123145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 13243183 - 13243077
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || |||||||||||  |||| ||| ||| |||||||||||||||    
T  13243183 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaa-acaaacccctataaaaaaagagatttagt 13243085  T
Q  113 tttatcac 120  Q
    || |||||    
T  13243084 ttcatcac 13243077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 27328780 - 27328673
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||| || ||||||||||  ||||| ||| || || |||||||||||||    
T  27328780 tacacaaatatatctccaaatatcatgaattaatgttatattcaccttaaatcttcttttaaacacaaagatcaaacccctatggagaaagagatttagt 27328681  T
Q  113 tttatcac 120  Q
    || |||||    
T  27328680 ttcatcac 27328673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 47911395 - 47911502
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||| |||||||||| || |||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  47911395 tacataaatatatctccatatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 47911494  T
Q  113 tttatcac 120  Q
    || |||||    
T  47911495 ttcatcac 47911502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30042327 - 30042254
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  30042327 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 30042254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 41696942 - 41696869
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  41696942 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 41696869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 51721310 - 51721395
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||  |||| |||||||||||||||    
T  51721310 caaatatcatgaattaatgttatattcacctcaaatctttttttaaacacaaaaatcaaaaccctgtagagaaagagatttagttt 51721395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 16465517 - 16465410
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||| | ||||||| ||||||||||||||| |||| ||||||| || || ||||||||||| ||||| |||  |||| |||||||||||||    
T  16465517 tacacaaatatatatccaaatatcatgaattaatgttatattcaactcaaatattcttttaaacacaaaaatcaaacccctgtagagaaagagatttagt 16465418  T
Q  113 tttatcac 120  Q
    || |||||    
T  16465417 ttcatcac 16465410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 22427769 - 22427691
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| ||||||||| || ||||||||||||| ||||||    
T  22427769 tacacaaatatatcttcaaatatcgtgaattaatgttatattcacttcaaatcttcttttaaacacaaaagttaaaacc 22427691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 38236692 - 38236766
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc 92  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||| || ||||||||||| |||||||||    
T  38236692 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccc 38236766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 15083578 - 15083505
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  15083578 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 15083505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 16010000 - 16010073
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||| ||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  16010000 aaatatatctttaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 16010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 27330774 - 27330701
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  27330774 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 27330701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 33214030 - 33214107
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||||| ||||||||| || ||||  |||||||||||||||||||||| |||||||||||||| |||||||    
T  33214030 tacacaaatatatgttcaaatatcataaatttttgttatgttcacctcaaatcttcttctaaacacaaaaatcaaaac 33214107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 37786572 - 37786645
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  37786572 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 37786645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 47911843 - 47911770
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  47911843 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 47911770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 50547329 - 50547256
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  50547329 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 50547256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 41102886 - 41102958
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||||||||||  |||||||||||||| ||||||||| |||||||| ||||||||||| |||||||    
T  41102886 aaatatatcttcaaatatcgtgaattaatgttatattcacctcagatcttattttaaacacaaaaatcaaaac 41102958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 2584582 - 2584658
Alignment:
Q  14 acacaaatatatcttcaaatattatgaattaatgtt-atgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||||||||| || |||||||||||||| ||||||||    
T  2584582 acacaaatatatct--aaatattatgaattaatgtttatgttcacctcaaattttcttctaaacacaaaaatcaaaacc 2584658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 4231291 - 4231398
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||| | | |||||||||| || || |||||||| || ||||| ||| ||||| ||||| |||||||    
T  4231291 tacacaaatatatctccaaatatcatgaattaatgttgtatccacctcaaattttcttttaaacacagaaatcaaacccctatagagaaagaaatttagt 4231390  T
Q  113 tttatcac 120  Q
    || |||||    
T  4231391 ttcatcac 4231398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 45052556 - 45052485
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  45052556 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaa 45052485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 53776853 - 53776944
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    ||||||| | |||||||||||||||||   ||||||||| || ||||||||||| ||||||||| || |||||||||||||||||| |||||    
T  53776853 caaatatcacgaattaatgttatgttcctgtcaaatcttcttttaaacacaaaaatcaaaaccctatggaaaaagagatttagtttcatcac 53776944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 55412802 - 55412711
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    ||||||| | ||||||||||||||||||||||||||||| || ||||||||||| ||||| ||  || || ||||||||||||||| |||||    
T  55412802 caaatatcacgaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaatccttatggagaaagagatttagtttcatcac 55412711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 3891565 - 3891496
Alignment:
Q  22 atatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  3891565 atatcttcaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaattcaaaacc 3891496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 4231759 - 4231686
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| |||||| |||| ||||||||    
T  4231759 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacataaaaatcaaaacc 4231686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 22606070 - 22606143
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  | |||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  22606070 aaatatatctccaaatatcgtaaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 22606143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30362459 - 30362386
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  30362459 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaattcaaaacc 30362386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 38698022 - 38698095
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  38698022 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 38698095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 43339500 - 43339573
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| ||||||| |||||||||||| || ||||||||||||||| || ||||||||||| ||||||||    
T  43339500 aaatatatctccaaatatcatgaattaatgtcatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 43339573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 43339881 - 43339796
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| |||||||||||| || ||||||||||||||| || ||||||||||| ||||||||   |||| |||||||||||||||    
T  43339881 caaatataatgaattaatgtaatattcacctcaaatcttcttttaaacacaaaaatcaaaaccgtgtagagaaagagatttagttt 43339796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 44842043 - 44841970
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||    
T  44842043 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaacc 44841970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 45171911 - 45171984
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| ||||||   |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  45171911 aaatatatctccaaataccgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 45171984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 55412411 - 55412484
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||| || |||||||||||  |||||||    
T  55412411 aaatatatctccaaatattgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaagcaaaacc 55412484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 2219195 - 2219267
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  2219195 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 2219267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 16465133 - 16465205
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  16465133 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 16465205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 18763141 - 18763205
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||| || |||||||||||    
T  18763141 aaatatatctccaaatatagtgaattaatgttatgttcacctcaaatcttcttttaaacacaaaa 18763205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 27127388 - 27127460
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  27127388 aaatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 27127460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 27328350 - 27328422
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  27328350 aaatatatctccaaatatcgtgaattaatgttatattcacatcaaatcttattttaaacacaaaaatcaaaac 27328422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 31312507 - 31312435
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| |||||||    
T  31312507 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaac 31312435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 11122797 - 11122868
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  ||||||||||| || |||||||||||||||||| ||||||||||| ||||||    
T  11122797 aaatatatctccaaatatcgtgaattaatgtcatattcacctcaaatcttattttaaacacaaaaatcaaaa 11122868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 10826590 - 10826517
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| ||||||| ||||| |||| |||| ||||||||||||||| || ||||||||||| ||||||||    
T  10826590 aaatatatctccaaatatcatgaagtaattttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 10826517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 23020997 - 23021070
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  ||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  23020997 aaatatatctcaaaatatcgtgaattaatgttataatcacctcaaatcttattttaaacacaaaaatcaaaacc 23021070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 29835248 - 29835171
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||| |||| | ||||||| || ||||  |||||||||||||||||||||| |||||||||||||| |||||||    
T  29835248 tacacaaacatatgtccaaatatcataaatttttgttatgttcacctcaaatcttcttctaaacacaaaaatcaaaac 29835171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30439154 - 30439081
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| |||||||||||||||||| |||||| |||| ||||||||    
T  30439154 aaatatatctcaaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacaaaaaaatcaaaacc 30439081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 38698414 - 38698329
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||||| ||||||| || ||||||||||| | ||||||   |||| |||||||||||||||    
T  38698414 caaatatcatgaattaatgttatattcacctaaaatcttcttttaaacacaaaaatgaaaaccatgtagagaaagagatttagttt 38698329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 40907342 - 40907415
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||    
T  40907342 aaatatatctccaaatatcgtgaattaatgttatattcaccccaaatcttattttaaacagaaaaatcaaaacc 40907415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 8850630 - 8850559
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||||||||  ||||||  |||||||||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  8850630 aaatatatctctaaatatcgtgaattaatgttatattcacctcaaattttattttaaacacaaaaatcaaaa 8850559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 37219041 - 37218968
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||  |||||||||| ||||||||||| ||||||||    
T  37219041 aaatatatctctaaatatcgtgaattaatgttatattcaccctaaatcttattttaaacacaaaaatcaaaacc 37218968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 2585062 - 2584987
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||||||||  |||||| |||||||||||||||||| ||| | |||||| ||| |||||||||| ||||||    
T  2585062 tacacaaatatatctctaaatatcatgaattaatgttatgtttacc-ccaatcttcttcaaaacacaaaaatcaaaa 2584987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 18411346 - 18411390
Alignment:
Q  38 tgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    |||||||||||||| |||||||||||||||||| |||||||||||    
T  18411346 tgaattaatgttatattcacctcaaatcttattttaaacacaaaa 18411390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 37180896 - 37180834
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||  |||||||||||||| ||||||| ||||||| || ||||||||||| ||||||||    
T  37180896 caaatatcgtgaattaatgttatattcaccttaaatcttcttttaaacacaaaattcaaaacc 37180834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 51721678 - 51721608
Alignment:
Q  21 tatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||| |||||||  |||||||||||||| ||||||| ||||||| || ||||||||||| | ||||||    
T  51721678 tatatctccaaatatcgtgaattaatgttatattcaccttaaatcttcttttaaacacaaaaattaaaacc 51721608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 42827201 - 42827272
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||||||||| ||| |||||||| || || |||||| |||| ||||||    
T  42827201 aaatatatctccaaatatcgtgaattaatgttatattctcctcaaatattcttttaaacataaaaatcaaaa 42827272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 40424470 - 40424432
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatctt 67  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  40424470 caaatatcatgaattaatgttatattcacctcaaatctt 40424432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 4231411 - 4231455
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  4231411 ttagttatataaattgtcacgctgtatattattattattattatt 4231455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 27330492 - 27330536
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| |||| | |||||||||||| ||||||    
T  27330492 ttagttatataaattgtcacactatatattattattattattatt 27330536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 30042013 - 30042057
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  30042013 ttagttatataaattgtcacgctgtatattattattattattatt 30042057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 30438805 - 30438849
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  30438805 ttagttatataaattgtcacgctgtatattattattattattatt 30438849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 41103216 - 41103172
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  41103216 ttagttatataaattgtcacgctgtatattattattattattatt 41103172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 47911512 - 47911556
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  47911512 ttagttatataaattgtcacgctgtatattattattattattatt 47911556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 53776958 - 53776998
Alignment:
Q  142 ttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  53776958 ttatataaattgtcacactgtatattattattattattatt 53776998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 53777223 - 53777175
Alignment:
Q  43 taatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||| || |||||||||||| || ||||||||||| ||||||||    
T  53777223 taatgttatattaacctcaaatcttcttttaaacacaaaaatcaaaacc 53777175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 57818 - 57711
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||| ||||||| ||||||| | |||||||||||||||||| |||||||||| || ||||||||||| ||||||||| |||||||||||||||||||    
T  57818 tacacaactatatctacaaatatcacgaattaatgttatgttcatctcaaatcttcttttaaacacaaaaatcaaaaccctatagaaaaagagatttagt 57719  T
Q  113 tttatcac 120  Q
    || |||||    
T  57718 ttcatcac 57711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 57410 - 57483
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||| |||||||||| || ||||||||||| ||||||||    
T  57410 aaatatatctccaaatatcgtgaattaatgttatattcagctcaaatcttcttttaaacacaaaaatcaaaacc 57483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 56119 - 56008
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatt 108  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||    
T  56119 tttatacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatt 56020  T
Q  109 tagttttatcac 120  Q
    || ||| |||||    
T  56019 taatttcatcac 56008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 55708 - 55779
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  55708 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaa 55779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 3905359 - 3905466
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| |||||||||||||||||||    
T  3905359 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagaaaaagagatttagt 3905458  T
Q  113 tttatcac 120  Q
    || |||||    
T  3905459 ttcatcac 3905466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 15154129 - 15154022
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||| | ||||| |||||||| ||||    
T  15154129 tacacaaatatatcttcaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaactctatagagaaagagatctagt 15154030  T
Q  113 tttatcac 120  Q
    || |||||    
T  15154029 ttcatcac 15154022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 27550051 - 27550158
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||| || ||||||||||| ||||||||| || || |||||||||||||    
T  27550051 tacacaaatatatctccaaatatcataaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatcaaaaccctatggagaaagagatttagt 27550150  T
Q  113 tttatcac 120  Q
    || |||||    
T  27550151 ttcatcac 27550158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 25225007 - 25224906
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  25225007 tacacaaatatatctcaaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 25224908  T
Q  113 tt 114  Q
    ||    
T  25224907 tt 25224906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 39965597 - 39965701
Alignment:
Q  16 acaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtttt 115  Q
    ||||||||||||  |||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||||     
T  39965597 acaaatatatctcaaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagtttc 39965696  T
Q  116 atcac 120  Q
    |||||    
T  39965697 atcac 39965701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 42079308 - 42079415
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||| ||||||| ||||||| | |||||||||||||||||| |||||||||| || |||||||| || ||||||||| ||| |||||||||||||||    
T  42079308 tacacaactatatctacaaatatcacgaattaatgttatgttcatctcaaatcttcttttaaacacagaaatcaaaaccctataaaaaaagagatttagt 42079407  T
Q  113 tttatcac 120  Q
    || |||||    
T  42079408 ttcatcac 42079415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 3753407 - 3753511
Alignment:
Q  16 acaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtttt 115  Q
    |||| ||||||| ||||||| | |||||||||||||||||| |||||||||| || ||||| ||||  ||||||||| |||||||||||||||||||||     
T  3753407 acaactatatctacaaatatcacgaattaatgttatgttcatctcaaatcttcttttaaacccaaagatcaaaaccctatagaaaaagagatttagtttc 3753506  T
Q  116 atcac 120  Q
    |||||    
T  3753507 atcac 3753511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 76028 - 76135
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||| |||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||  ||||| ||| ||||| ||||||||||| |    
T  76028 tacacaaatacatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaatatcaaacccctatagagaaagagatttaat 76127  T
Q  113 tttatcac 120  Q
    || |||||    
T  76128 ttcatcac 76135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 12522194 - 12522115
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc 92  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||| | |||||||    
T  12522194 tacacaaatatatcttaaaatattatgaatttatgttatgttcacctcaaatcttcttttaaacacaaaaattaaaaccc 12522115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 25761605 - 25761710
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||| || |||| |||||| ||||||||| ||||| |||||||||||||    
T  25761605 tacacaaatatatctccaaatatcatgaattaatattatattcacctcaaatcttcttttaaa-acaaaaatcaaaaccc-atagagaaagagatttagt 25761702  T
Q  113 tttatcac 120  Q
    || |||||    
T  25761703 ttcatcac 25761710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 38280712 - 38280810
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttag 111  Q
    |||||||| |||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| ||||| ||||||||||||    
T  38280712 tacacaaacatatctccaaatatcatgaattaatgttatattcacctcaaattttcttttaaacacaaaaatcaaacccctatagagaaagagatttag 38280810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 45136294 - 45136363
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  45136294 tacacaaatatatctccaaatattatgaattaatgttatattcacctcaaatcttcttttaaacacaaaa 45136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 39067482 - 39067586
Alignment:
Q  10 ttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattt 109  Q
    ||||||||||||||||||   ||||| ||||||||||||||| || |||||||||||| || ||||||||||| |||||||||  |||| ||| ||||||    
T  39067482 ttatacacaaatatatctcacaatatcatgaattaatgttatatttacctcaaatcttcttttaaacacaaaaatcaaaaccccgtagagaaaaagattt 39067581  T
Q  110 agttt 114  Q
    |||||    
T  39067582 agttt 39067586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 39773660 - 39773759
Alignment:
Q  21 tatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    ||||||| ||||||| | |||||||||||||||||| ||  |||||| || ||||||||||| ||||||||| ||| ||||||||||||||||| |||||    
T  39773660 tatatctacaaatatcacgaattaatgttatgttcatcttcaatcttcttttaaacacaaaaatcaaaaccctataaaaaaagagatttagtttcatcac 39773759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 6646693 - 6646578
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgt--------tcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaaga 104  Q
    ||||||||||||||| ||||||| |||||||||||||||||        |||||||||||||| || ||||||||||| ||||||||| ||||| |||||    
T  6646693 tacacaaatatatctccaaatatcatgaattaatgttatgtactgttgttcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaaga 6646594  T
Q  105 gatttagttttatcac 120  Q
    ||||||| || |||||    
T  6646593 gatttagattcatcac 6646578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 38407946 - 38407868
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| |||| | ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38407946 tacacaaaaatatttccaaatatcatgaatttatgttatgttcacctcaaatcttcttctaaacacaaaaatcaaaacc 38407868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 2290841 - 2290930
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatc 118  Q
    ||||||| || |||||||||||| ||||||||||||||| || ||||||||||| ||||||||   |||| |||||||||||||||||||    
T  2290841 caaatatcataaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccttgtagagaaagagatttagttttatc 2290930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 38281105 - 38281032
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  38281105 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 38281032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 3850270 - 3850350
Alignment:
Q  40 aattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    ||||||||||||||||| |||||||||| || ||||||||||| |||||| || ||| ||||||||||||||||| |||||    
T  3850270 aattaatgttatgttcatctcaaatcttcttttaaacacaaaaatcaaaatcctataaaaaaagagatttagtttcatcac 3850350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 14004465 - 14004540
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaa 88  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| |||||    
T  14004465 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaa 14004540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 4737165 - 4737265
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaa---atcttattctaaacacaaaagtcaaaacccaatagaaaaagagattt 109  Q
    ||||||||||||||| ||||||| ||||||||||| ||| ||||| ||||   ||||| || ||||||||||| ||||||||| ||||| ||||||||||    
T  4737165 tacacaaatatatctccaaatatcatgaattaatgatatattcacttcaaatgatcttcttttaaacacaaaaatcaaaaccctatagagaaagagattt 4737264  T
Q  110 a 110  Q
    |    
T  4737265 a 4737265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 28390453 - 28390549
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattta 110  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||| |||| | || ||||||||||| |||||||||  || | |||||||||||    
T  28390453 tacacaaatatatctccaaatatcatgaattaatgttatattcacctc-aatcatcttttaaacacaaaaatcaaaaccctgtacagaaagagattta 28390549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 76474 - 76402
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| |||| |||||| |||||||    
T  76474 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaatacaaaaatcaaaac 76402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 1053585 - 1053687
Alignment:
Q  13 tacacaaatatatcttcaaatat--tatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagattta 110  Q
    ||||||||||||||| |||||||  |||||||||||       |||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||    
T  1053585 tacacaaatatatctgcaaatatcatatgaattaat-------tcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagattta 1053677  T
Q  111 gttttatcac 120  Q
    |||| |||||    
T  1053678 gtttcatcac 1053687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 3905749 - 3905678
Alignment:
Q  19 aatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  3905749 aatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 3905678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1053980 - 1053907
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  ||||||||| |||| ||||||||||||||| || ||||||||||| ||||||||    
T  1053980 aaatatatctccaaatatcgtgaattaatcttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 1053907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 15400135 - 15400208
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||| || || ||||||||||| ||||||||    
T  15400135 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaaacc 15400208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 15400514 - 15400437
Alignment:
Q  37 atgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||   || | |||||||||||||||    
T  15400514 atgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccttgtacagaaagagatttagttt 15400437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 27550468 - 27550395
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || | ||||||||| ||||||||    
T  27550468 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttctttttaacacaaaattcaaaacc 27550395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 28390836 - 28390763
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  28390836 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaataaaaacc 28390763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 39966005 - 39965932
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||| ||||||||| |||||||||||||||||| ||||||| ||| ||||||||    
T  39966005 aaatatatctccaaatatcgtgaactaatgttatattcacctcaaatcttattttaaacacgaaaatcaaaacc 39965932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 2291209 - 2291139
Alignment:
Q  21 tatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  2291209 tatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaattaaaacc 2291139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 6646271 - 6646344
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||| || |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  6646271 aaatataactccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaattaaaacc 6646344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 15153768 - 15153841
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  ||||||||| |||| ||||||||||||||| || |||||| |||| ||||||||    
T  15153768 aaatatatctccaaatatcgtgaattaatcttatattcacctcaaatcttcttttaaacaaaaaaatcaaaacc 15153841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 39774056 - 39773983
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  |||||| ||||||||||||||| |||| |||||| ||| || ||||||||||| ||||||||    
T  39774056 aaatatatctctaaatatcatgaattaatgttatattcaactcaaaccttcttttaaacacaaaaatcaaaacc 39773983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 39067880 - 39067808
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||| ||||||| |||||||    
T  39067880 aaatatatctcaaaatatcgtgaattaatgttatattcacctcaaatcttcttttaatcacaaaaatcaaaac 39067808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 42079761 - 42079689
Alignment:
Q  19 aatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||| |||||||  |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||||    
T  42079761 aatatatctccaaatatcgtgaattaatgttatattcagctcaaatcttcttttaaactcaaaaatcaaaacc 42079689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 37724355 - 37724305
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatctta 68  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||||    
T  37724355 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatctta 37724305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3850671 - 3850598
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| | |||||||  |||||||||||||| ||||  ||||||||| || | ||||||||| ||||||||    
T  3850671 aaatatatatccaaatatcgtgaattaatgttatattcagttcaaatcttcttttgaacacaaaaatcaaaacc 3850598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 27550184 - 27550228
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| ||| || |||||||||||| ||||||    
T  27550184 ttagttatataaattgtcacaccgtatattattattattattatt 27550228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 21097024 - 21096917
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| ||  |||||||||| ||||||||| ||||| |||||||||||||    
T  21097024 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttctttaaaacacaaaaatcaaaaccctatagagaaagagatttagt 21096925  T
Q  113 tttatcac 120  Q
    || |||||    
T  21096924 ttcatcac 21096917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 44510862 - 44510969
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||| |||||||||||||||||||    
T  44510862 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccctatagaaaaagagatttagt 44510961  T
Q  113 tttatcac 120  Q
    || |||||    
T  44510962 ttcatcac 44510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 48129316 - 48129209
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||    
T  48129316 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagt 48129217  T
Q  113 tttatcac 120  Q
    || |||||    
T  48129216 ttcatcac 48129209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 14535805 - 14535909
Alignment:
Q  15 cacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||||||||||||||    
T  14535805 cacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagttt 14535904  T
Q  115 tatca 119  Q
     ||||    
T  14535905 catca 14535909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 25657433 - 25657326
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||||||||| || || ||||||||||| ||||||||| || || |||||||||||||    
T  25657433 tacacaaatatatctccaaatatcataaattaatgttatgttcacctcaaatattcttttaaacacaaaaatcaaaaccctatggagaaagagatttagt 25657334  T
Q  113 tttatcac 120  Q
    || |||||    
T  25657333 ttcatcac 25657326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 30301448 - 30301559
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatt 108  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||| || |||||| |||| | ||||||| ||||| |||||||||    
T  30301448 tttatacacaaatatatatccaaatatcatgaattaatgttatgttcagctcaaatcttcttttaaacaaaaaaattaaaaccctatagagaaagagatt 30301547  T
Q  109 tagttttatcac 120  Q
    |||||| |||||    
T  30301548 tagtttcatcac 30301559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 33706172 - 33706065
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||  ||||| |||||||||||||    
T  33706172 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccatatagagaaagagatttagt 33706073  T
Q  113 tttatcac 120  Q
    || |||||    
T  33706072 ttcatcac 33706065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 5328507 - 5328400
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||||||| | | ||||||||||||||  ||||||||||||||| || ||||||||||| ||||||||| ||||| ||| |||||||||    
T  5328507 tacacaaatatatcttcaactgtcatgaattaatgttacattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaaaagatttagt 5328408  T
Q  113 tttatcac 120  Q
    || |||||    
T  5328407 ttcatcac 5328400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 10774351 - 10774244
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||  || ||||| ||||| |||||||    
T  10774351 tacataaatatatcttcaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacacctatagagaaagaaatttagt 10774252  T
Q  113 tttatcac 120  Q
    || |||||    
T  10774251 ttcatcac 10774244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 30838209 - 30838316
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||| |||||| ||||| ||||||||| || ||||||||||| ||||| ||| ||||||||||| |||||||    
T  30838209 tacacaaatatatctccaaatatcatgaattattgttatattcacttcaaatcttcttttaaacacaaaaatcaaacccctatagaaaaagatatttagt 30838308  T
Q  113 tttatcac 120  Q
    || |||||    
T  30838309 ttcatcac 30838316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 31031686 - 31031579
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| || |||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| ||||||||||| |    
T  31031686 tacacaaatatatctccaaatatcataaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttaat 31031587  T
Q  113 tttatcac 120  Q
    || |||||    
T  31031586 ttcatcac 31031579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 12769263 - 12769170
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagaga 106  Q
    ||||||| ||||||| ||||||| | |||||||||||||||||| |||||||||| || ||||||||||| ||||||||| |||||||||||||    
T  12769263 tacacaactatatctacaaatatcacgaattaatgttatgttcatctcaaatcttcttttaaacacaaaaatcaaaaccctatagaaaaagaga 12769170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 51088251 - 51088150
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||  | || |||||||||||||    
T  51088251 tacacaaatatatctcccaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctgtcgagaaagagatttagt 51088152  T
Q  113 tt 114  Q
    ||    
T  51088151 tt 51088150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 7154465 - 7154364
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||| ||||| ||||||| || |||||||||||| ||||||||||||||| || ||||||||||| ||||| | | ||||| |||||||||||||    
T  7154465 tacacaaatttatctccaaatatcattaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacctctatagagaaagagatttagt 7154366  T
Q  113 tt 114  Q
    ||    
T  7154365 tt 7154364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 34333940 - 34333860
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||| ||| |||||||||| ||||||    
T  34333940 tttatacacaaatatatcttcaaatatcatgaatttatgttatgttaatctcaaatctttttcaaaacacaaaaatcaaaa 34333860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 33705788 - 33705861
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||| ||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  33705788 aaatatatctttaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 33705861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 48128917 - 48128990
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  48128917 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 48128990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 9136040 - 9135960
Alignment:
Q  37 atgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttat 117  Q
    |||||||||||||||||| | || |||||||||| ||||||||||| |||||||||  |||||||||||||||| ||||||    
T  9136040 atgaattaatgttatgtttatctaaaatcttattttaaacacaaaaatcaaaaccctgtagaaaaagagatttaattttat 9135960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 46123290 - 46123232
Alignment:
Q  9 tttatacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatctt 67  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  46123290 tttatacacaaatatattttcaaatatcatgaattaatgttatgttcagctcaaatctt 46123232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 7557123 - 7557054
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||| || |||||||||||    
T  7557123 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcgaatcttcttttaaacacaaaa 7557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 14536236 - 14536163
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||| |||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  14536236 aaatacatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 14536163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 25657016 - 25657089
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  25657016 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaattcaaaacc 25657089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 35955941 - 35955856
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||| || ||  |||| |||||||||||||||    
T  35955941 caaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcataatcctgtagagaaagagatttagttt 35955856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 33004921 - 33004992
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||| |  ||||||||||| ||||||    
T  33004921 aaatatatctacaaatatcacgaattaatgttatgttcacctcaaatcttttcttaaacacaaaaatcaaaa 33004992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 44511250 - 44511179
Alignment:
Q  19 aatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||| |||||||  |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  44511250 aatatatctccaaatatcgtgaattaatgttatattcacttcaaatcttattttaaacacaaaaatcaaaac 44511179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 7154111 - 7154184
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||| ||||||||||  |||||||||||||| ||||||||| ||||||||  |||||||||| ||||||||    
T  7154111 aaatataacttcaaatatcgtgaattaatgttatattcacctcagatcttatttaaaacacaaaaatcaaaacc 7154184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 10773920 - 10773993
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| | |||||||  |||||||||||||| |||||||||||||||||| |||||| |||| ||||||||    
T  10773920 aaatatatttccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacataaaaatcaaaacc 10773993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35955570 - 35955643
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  35955570 aaatatatctcaaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 35955643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 36732186 - 36732125
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| |||||||    
T  36732186 caaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaac 36732125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 47035735 - 47035658
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    ||||||||||||| | ||||||| || ||||  | |||||||||||||||||||| |||||||||||||| |||||||    
T  47035735 tacacaaatatatgtccaaatatcataaatttttattatgttcacctcaaatcttcttctaaacacaaaaatcaaaac 47035658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30301854 - 30301781
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  ||| |||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  30301854 aaatatatctccaaatatcgtgagttaatgttatattcacctcaaatcttcttttaaacacaaaaattaaaacc 30301781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 46464287 - 46464360
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||||  ||||||  |||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  46464287 aaatatatctcaaaatatcgtgaattaatgttatattcacctcaaatcttcttttaaacacaaaaataaaaacc 46464360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 29648002 - 29648087
Alignment:
Q  39 gaattaatgttatgttcacctcaaatcttattctaaacacaaa----agtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    ||||||| ||||||||||||||||||||| || ||||||||||    | ||||||||| ||| | ||||||||||||||| |||||    
T  29648002 gaattaaagttatgttcacctcaaatcttcttttaaacacaaaaattaatcaaaaccctataaagaaagagatttagtttcatcac 29648087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 9135661 - 9135727
Alignment:
Q  23 tatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaa 89  Q
    ||||| |||||||  |||||||||||||| |||| |||||||||| || ||||||||||| ||||||    
T  9135661 tatctccaaatatcgtgaattaatgttatattcagctcaaatcttcttttaaacacaaaaatcaaaa 9135727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 29648102 - 29648147
Alignment:
Q  137 tttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||    
T  29648102 tttagttatataaattgtcacactgtatattattattattattatt 29648147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 51087877 - 51087930
Alignment:
Q  38 tgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  51087877 tgaattaatgttatattcacctcaaatcttcttttaaacacaaaaattaaaacc 51087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 12162014 - 12162062
Alignment:
Q  19 aatatatcttcaaatattatgaattaatgttatgttcacctcaaatctt 67  Q
    ||||||||| ||||||| ||||||| ||||| |||||||||||||||||    
T  12162014 aatatatctccaaatataatgaatttatgttttgttcacctcaaatctt 12162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 29520890 - 29520846
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaa 62  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||    
T  29520890 aaatatatcttcaaatatcgtgaattaatgttatattcacctcaa 29520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 33005288 - 33005240
Alignment:
Q  43 taatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  33005288 taatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 33005240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 29520657 - 29520739
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||| |||||||   || ||||||||||| ||||||||   |||| | |||||||||||||    
T  29520657 caaatatcatgaattaatgttatattcacttcaaatc---ttttaaacacaaaaatcaaaaccttgtagagatagagatttagttt 29520739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 30838592 - 30838554
Alignment:
Q  53 ttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  30838592 ttcacctcaaatcttattttaaacacaaaaatcaaaacc 30838554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 29648384 - 29648312
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||  |||||||  |||||||||||||| |||| ||| |||||| || ||||||||||| ||||||||    
T  29648384 aaatatatccccaaatatcgtgaattaatgttatattcatctc-aatcttcttttaaacacaaaaatcaaaacc 29648312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 30301571 - 30301616
Alignment:
Q  137 tttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    ||||||||||||||||||| ||| || |||||||||||| ||||||    
T  30301571 tttagttatataaattgtcacaccgtatattattattattattatt 30301616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 9e-29; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 14105556 - 14105448
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctc-aaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttag 111  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||| || ||||||||||| ||||| ||| ||||||||||||||||||    
T  14105556 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaaatcttcttttaaacacaaaaatcaaacccctatagaaaaagagatttag 14105457  T
Q  112 ttttatcac 120  Q
    ||| |||||    
T  14105456 tttcatcac 14105448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 954100 - 954207
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    |||||||||||||||  |||||| ||||||||||||||| | ||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||    
T  954100 tacacaaatatatctcaaaatatcatgaattaatgttatatccacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagt 954199  T
Q  113 tttatcac 120  Q
    || |||||    
T  954200 ttcatcac 954207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 4588316 - 4588423
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||  | ||||||||||| ||||| ||| ||||| |||||||||||||    
T  4588316 tacacaaatatatctccaaatatcatgaattaatgttatattcacctcaaatcttcctttaaacacaaaaatcaaacccctatagagaaagagatttagt 4588415  T
Q  113 tttatcac 120  Q
    || |||||    
T  4588416 ttcatcac 4588423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 27441486 - 27441380
Alignment:
Q  14 acacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtt 113  Q
    ||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| ||||||||||||||    
T  27441486 acacaaacatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagtt 27441387  T
Q  114 ttatcac 120  Q
    | |||||    
T  27441386 tcatcac 27441380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 24084183 - 24084082
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| || ||||||||||| | |||| || ||||| |||||||||||||    
T  24084183 tacacaaatatatctccaaatatcacgaattaatgttatgttcacctcaaatcttcttttaaacacaaaaatgaaaatcctatagagaaagagatttagt 24084084  T
Q  113 tt 114  Q
    ||    
T  24084083 tt 24084082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 27784043 - 27783942
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||| ||||||||| ||||||| ||||||||||||||| |||||||||||| || || ||||||||||| ||||| ||  |||||||||||||||||||    
T  27784043 tacactaatatatctccaaatatcatgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaacccatatagaaaaagagatttagt 27783944  T
Q  113 tt 114  Q
    ||    
T  27783943 tt 27783942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 23581830 - 23581730
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| |||| ||||||||    
T  23581830 tacacaaatatatctccaaatatcatgaattattgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagggatttagt 23581731  T
Q  113 t 113  Q
    |    
T  23581730 t 23581730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 5686820 - 5686903
Alignment:
Q  37 atgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttttatcac 120  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||| ||||||||||||||| |||||    
T  5686820 atgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaaaccctatagagaaagagatttagtttcatcac 5686903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 16921864 - 16921757
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||| ||||||||| |||||||||||| || || ||||||||||| | ||| ||| ||||| |||||||||||||    
T  16921864 tacacaaatatatctccaaatatcatgaactaatgttatattcacctcaaatattcttttaaacacaaaaattaaacccctatagagaaagagatttagt 16921765  T
Q  113 tttatcac 120  Q
    || |||||    
T  16921764 ttcatcac 16921757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 25120266 - 25120165
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| |||| || ||||||||||||||| ||||||||||||||| || ||||| ||||| |||||||||  || ||||| |||||||||    
T  25120266 tacacaaatatatctccaaacatcatgaattaatgttatattcacctcaaatcttcttttaaactcaaaaatcaaaaccctgtacaaaaaaagatttagt 25120167  T
Q  113 tt 114  Q
    ||    
T  25120166 tt 25120165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14105163 - 14105236
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  14105163 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 14105236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 16919344 - 16919417
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  16919344 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 16919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27783622 - 27783695
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  27783622 aaatatatctccaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 27783695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 4588734 - 4588661
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  4588734 aaatatatctccaaatatcgtgaattaatgttatattcacctcatatcttattttaaacacaaaaatcaaaacc 4588661  T

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Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 11836480 - 11836407
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||    
T  11836480 aaatatatctccaaatatcgtgaattaatgttatattcacctaaaatcttattttaaacacaaaaatcaaaacc 11836407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 28580087 - 28580002
Alignment:
Q  29 caaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagttt 114  Q
    ||||||| ||||||||||||||| ||||||  ||||||| || ||||||||||| |||||||||  |||| |||||||||||||||    
T  28580087 caaatatcatgaattaatgttatattcacccgaaatcttcttttaaacacaaaaatcaaaaccctgtagagaaagagatttagttt 28580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 11153040 - 11153142
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagt 112  Q
    ||||||||||||||| ||||||| ||||||    ||||| |||||| |||||||| || ||||||||||| |||||| || ||||| |||||||||||||    
T  11153040 tacacaaatatatctccaaatatcatgaat----gttatattcaccacaaatcttcttttaaacacaaaaatcaaaa-cctatagagaaagagatttagt 11153134  T
Q  113 tttatcac 120  Q
    || |||||    
T  11153135 ttcatcac 11153142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 15287893 - 15287947
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatctt 67  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  15287893 tacacaaatatatcttaaaatatcatgaattaatgttatgttcacatcaaatctt 15287947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 5687148 - 5687075
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| |||||||||  ||||||||| |||| ||||||||||||||| || ||||||||||| ||||||||    
T  5687148 aaatatattttcaaatatcgtgaattaatattatattcacctcaaatcttcttttaaacacaaaaatcaaaacc 5687075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 25119839 - 25119912
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| | ||||||||||||||||||||||| || ||||||||| || || ||||||||||| ||||||||    
T  25119839 aaatatatgtccaaatattatgaattaatgttatatttacctcaaatattcttttaaacacaaaaatcaaaacc 25119912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27441086 - 27441159
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  ||||||||| |||| ||||| |||||||||||| ||||||||||| ||||||||    
T  27441086 aaatatatctccaaatatcgtgaattaatattatattcacatcaaatcttattttaaacacaaaaatcaaaacc 27441159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 954501 - 954428
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||||||||||||| ||||||| |||| || || ||||||||||| ||||||||    
T  954501 aaatatatctccaaatatcgtgaattaatgttatattcaccttaaattttcttttaaacacaaaaatcaaaacc 954428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 28579725 - 28579798
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||| | |||||||  |||||||||||||| |||||||||||| || || ||||||||||| ||||||||    
T  28579725 aaatatatttccaaatatcgtgaattaatgttatattcacctcaaatattcttttaaacacaaaaatcaaaacc 28579798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 478195 - 478244
Alignment:
Q  45 atgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaa 94  Q
    ||||||| ||||||||||||||| | |||||||||||| |||||||||||    
T  478195 atgttatattcacctcaaatcttctactaaacacaaaaatcaaaacccaa 478244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 944565 - 944488
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaac 90  Q
    |||||||||| || |  |||||| || ||||  |||||| ||||||||||||||| |||||||||||||| |||||||    
T  944565 tacacaaataaatgtctaaatatcataaatttttgttatattcacctcaaatcttcttctaaacacaaaaatcaaaac 944488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 11153494 - 11153421
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  |||| |||| |||| |||||||||| |||| || ||||||||||| ||||||||    
T  11153494 aaatatatctccaaatatcgtgaaataatcttatattcacctcaagtcttcttttaaacacaaaaatcaaaacc 11153421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 478713 - 478666
Alignment:
Q  45 atgttatgttcacctcaaatcttattctaaacacaaaagtcaaaaccc 92  Q
    ||||||| || |||||||||||| |||||||||||||| |||||||||    
T  478713 atgttatatttacctcaaatcttcttctaaacacaaaaatcaaaaccc 478666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 24084065 - 24084020
Alignment:
Q  137 tttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    ||||||||||||||||||| ||| || |||||||||||| ||||||    
T  24084065 tttagttatataaattgtcacaccgtatattattattattattatt 24084020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 4588437 - 4588481
Alignment:
Q  138 ttagttatataaattgtctcactgtgtattattattataattatt 182  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||    
T  4588437 ttagttatataaattgtcacgctgtatattattattattattatt 4588481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 45875 - 45981
Alignment:
Q  14 acacaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacccaatagaaaaagagatttagtt 113  Q
    ||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| || ||||||||||| ||||| ||| ||||| ||||||||||||||    
T  45875 acacaaacatatctccaaatatcatgaattaatgttatattcacctcaaatcttcttttaaacacaaaaatcaaacccctatagagaaagagatttagtt 45974  T
Q  114 ttatcac 120  Q
    | |||||    
T  45975 tcatcac 45981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 46275 - 46202
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    |||||||||| |||||||  ||||||||| |||| ||||| |||||||||||| ||||||||||| ||||||||    
T  46275 aaatatatctccaaatatcgtgaattaatattatattcacatcaaatcttattttaaacacaaaaatcaaaacc 46202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 23171 - 23242
Alignment:
Q  20 atatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaagtcaaaacc 91  Q
    ||||||||  ||||||  |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  23171 atatatctctaaatatcgtgaattaatgttatattcacctcaaatcttattttaaacacaaaaatcaaaacc 23242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 23590 - 23550
Alignment:
Q  13 tacacaaatatatcttcaaatattatgaattaatgttatgt 53  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  23590 tacacaaatatatctccaaatatcatgaattaatgttatgt 23550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 4652 - 4703
Alignment:
Q  16 acaaatatatcttcaaatattatgaattaatgttatgttcacctcaaatctt 67  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  4652 acaaatatatccccaaatatcatgaattaatgttatgttcacctcaaatctt 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4809 - 4745
Alignment:
Q  18 aaatatatcttcaaatattatgaattaatgttatgttcacctcaaatcttattctaaacacaaaa 82  Q
    ||||||||||  ||||||  |||| ||||||||| ||||||||||||||| || |||||| ||||    
T  4809 aaatatatctctaaatatcgtgaactaatgttattttcacctcaaatcttcttttaaacataaaa 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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