View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21208_high_1 (Length: 357)
Name: NF21208_high_1
Description: NF21208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21208_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 23 - 348
Target Start/End: Original strand, 2462457 - 2462782
Alignment:
| Q |
23 |
aaaatcgttgcaattgtggaacacaatttaaagttatggttcaagttctgaaatatatgtggaactttctgatatttttcttttatatgatttctatagg |
122 |
Q |
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| T |
2462457 |
aaaatcgttgcaattgtggaacacaatttaaagttatggttcaagttctgaaatatatgtggaactttctgatatttttcttttatatgatttctatagg |
2462556 |
T |
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| Q |
123 |
aaaggtcttctcatcaatctttgatgtatttccttggtactaaagagaaacaagttttcaatcttttggtggtagatgtgtatattttactattaacatg |
222 |
Q |
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| T |
2462557 |
aaaggtcttctcatcaatctttgatgtatttccttggtactaaagagaaacaagttttcaatcttttggtggtagatgtgtatattttactattaacatg |
2462656 |
T |
|
| Q |
223 |
attattattatacacttttacataccataatggaaaacttgtttgacttgtgtaatgcttcaacaatgtgatcttcctttatgaatttattgtttcattc |
322 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462657 |
attattattatacacttttacataccataatggaaaacttgcttgacttgtgtaatgcttcaacaatgtgatcttcctttatgaatttattgtttcattc |
2462756 |
T |
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| Q |
323 |
tttttccaactaaatttattgatgat |
348 |
Q |
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|||||||||||||||||||||||||| |
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| T |
2462757 |
tttttccaactaaatttattgatgat |
2462782 |
T |
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