View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21210_high_21 (Length: 276)
Name: NF21210_high_21
Description: NF21210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21210_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 11098089 - 11098332
Alignment:
| Q |
10 |
aagaaaatctagtatttaagaacaaaatccatcacagaaaccccatttggaaagtcccaagatttatatgtcaaaatattcagaacatgaaatttacatc |
109 |
Q |
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| T |
11098089 |
aagaaaatctagtatttaagaacaaaatccatcaaagaaaccccatttggaaagtcccaagatttatatgtcaaaatattcagaacatgaaatttacatc |
11098188 |
T |
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| Q |
110 |
tctatcttaacagatccatatctcaaacatcattaaaacccaaaaattaccataaacatcattatatata-caacacaaattctgacaatgttttcacat |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
11098189 |
tctatcttaacagatccatatctcaaacatcattaaaacccaaaaattaccataaacatcattatatataccaacacaaattctgacaatgttttcacat |
11098288 |
T |
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| Q |
209 |
aaaaacataaatataattaacataaactttcagttataatattt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11098289 |
aaaaacataaatataattaacataaactttcagttataatattt |
11098332 |
T |
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