View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21211_high_1_N (Length: 656)

Name: NF21211_high_1_N
Description: NF21211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21211_high_1_N
NF21211_high_1_N
[»] chr1 (45 HSPs)
chr1 (129-625)||(12727753-12728250)
chr1 (222-354)||(20054517-20054650)
chr1 (222-354)||(20054973-20055106)
chr1 (222-354)||(20055429-20055562)
chr1 (222-354)||(20055885-20056018)
chr1 (222-354)||(20056341-20056474)
chr1 (222-354)||(20057244-20057377)
chr1 (222-354)||(20054061-20054194)
chr1 (222-354)||(20057700-20057833)
chr1 (221-391)||(43057503-43057674)
chr1 (222-391)||(50002266-50002436)
chr1 (222-354)||(20845642-20845775)
chr1 (222-354)||(38340938-38341071)
chr1 (225-375)||(52250217-52250368)
chr1 (222-391)||(16907229-16907399)
chr1 (222-350)||(16451914-16452043)
chr1 (222-350)||(16461067-16461196)
chr1 (222-386)||(35759589-35759754)
chr1 (220-386)||(2634924-2635091)
chr1 (222-350)||(20056797-20056926)
chr1 (239-386)||(2328315-2328463)
chr1 (182-350)||(43057010-43057175)
chr1 (181-356)||(12883554-12883726)
chr1 (222-391)||(50003056-50003226)
chr1 (238-354)||(20061188-20061305)
chr1 (222-386)||(35760895-35761060)
chr1 (184-375)||(30872897-30873085)
chr1 (223-393)||(31822645-31822816)
chr1 (223-331)||(20060322-20060431)
chr1 (222-346)||(50002688-50002813)
chr1 (182-386)||(7548091-7548292)
chr1 (1-68)||(12728309-12728376)
chr1 (222-336)||(46693716-46693831)
chr1 (226-336)||(51372859-51372970)
chr1 (223-391)||(10820587-10820758)
chr1 (222-386)||(23180730-23180895)
chr1 (177-329)||(2634523-2634672)
chr1 (225-287)||(52250642-52250705)
chr1 (225-287)||(52250979-52251042)
chr1 (219-263)||(35009974-35010018)
chr1 (271-348)||(16440610-16440687)
chr1 (271-317)||(31823115-31823161)
chr1 (302-395)||(42317616-42317709)
chr1 (279-334)||(46411173-46411228)
chr1 (271-380)||(842964-843073)
[»] chr7 (51 HSPs)
chr7 (220-391)||(6719053-6719225)
chr7 (222-386)||(28495854-28496019)
chr7 (222-353)||(13125117-13125249)
chr7 (219-386)||(42515092-42515260)
chr7 (222-351)||(2941738-2941868)
chr7 (222-375)||(42515555-42515709)
chr7 (222-346)||(2465773-2465898)
chr7 (222-350)||(2465960-2466089)
chr7 (222-350)||(34405572-34405701)
chr7 (222-350)||(36422288-36422417)
chr7 (177-361)||(25182386-25182567)
chr7 (222-361)||(2193281-2193421)
chr7 (219-386)||(46425741-46425909)
chr7 (226-386)||(6747583-6747744)
chr7 (222-350)||(28495589-28495718)
chr7 (222-361)||(2189169-2189309)
chr7 (219-350)||(35474099-35474231)
chr7 (222-354)||(9124991-9125124)
chr7 (219-350)||(679853-679984)
chr7 (219-335)||(35527099-35527216)
chr7 (184-348)||(22529182-22529343)
chr7 (226-354)||(5406573-5406702)
chr7 (238-386)||(11517386-11517534)
chr7 (219-350)||(2611630-2611762)
chr7 (185-337)||(9623257-9623405)
chr7 (223-350)||(26421287-26421415)
chr7 (219-354)||(29357434-29357570)
chr7 (201-347)||(29038984-29039127)
chr7 (226-351)||(18833321-18833447)
chr7 (270-391)||(43233408-43233529)
chr7 (219-354)||(26421738-26421874)
chr7 (289-391)||(26957606-26957708)
chr7 (231-336)||(31406574-31406680)
chr7 (234-354)||(36015404-36015525)
chr7 (222-296)||(13122486-13122561)
chr7 (222-287)||(7646459-7646525)
chr7 (300-386)||(13124761-13124847)
chr7 (222-263)||(7646539-7646580)
chr7 (222-263)||(43776271-43776312)
chr7 (270-337)||(31743854-31743921)
chr7 (225-350)||(20966087-20966213)
chr7 (302-391)||(3305374-3305463)
chr7 (279-336)||(11372501-11372558)
chr7 (305-354)||(33316760-33316809)
chr7 (285-361)||(2490064-2490140)
chr7 (289-337)||(6585657-6585705)
chr7 (234-337)||(16192368-16192472)
chr7 (271-383)||(1628719-1628828)
chr7 (132-166)||(7646676-7646710)
chr7 (300-350)||(16811906-16811956)
chr7 (219-263)||(3305326-3305370)
[»] scaffold0168 (1 HSPs)
scaffold0168 (222-386)||(2742-2907)
[»] chr4 (61 HSPs)
chr4 (219-391)||(1645721-1645894)
chr4 (222-354)||(12691974-12692107)
chr4 (220-386)||(50398511-50398678)
chr4 (201-391)||(23942747-23942934)
chr4 (222-351)||(44471300-44471430)
chr4 (222-387)||(49998635-49998801)
chr4 (220-386)||(50398966-50399133)
chr4 (220-386)||(51331254-51331421)
chr4 (219-391)||(3169201-3169374)
chr4 (222-375)||(8467783-8467929)
chr4 (219-338)||(23943214-23943334)
chr4 (222-350)||(7678597-7678726)
chr4 (219-391)||(29628640-29628812)
chr4 (222-386)||(35871628-35871792)
chr4 (228-375)||(14571702-14571850)
chr4 (241-391)||(4127431-4127582)
chr4 (222-351)||(23350258-23350388)
chr4 (222-350)||(24628952-24629084)
chr4 (222-350)||(24629408-24629537)
chr4 (219-354)||(21067766-21067899)
chr4 (222-336)||(44470850-44470964)
chr4 (219-347)||(53996087-53996216)
chr4 (219-386)||(31817824-31817992)
chr4 (172-375)||(1464158-1464358)
chr4 (230-336)||(4127872-4127979)
chr4 (222-320)||(50814800-50814899)
chr4 (226-375)||(15306070-15306226)
chr4 (230-353)||(27029310-27029434)
chr4 (219-354)||(9423830-9423966)
chr4 (185-337)||(13613840-13613988)
chr4 (222-336)||(21220306-21220421)
chr4 (272-350)||(14572176-14572254)
chr4 (225-354)||(27026535-27026664)
chr4 (222-335)||(27578884-27578998)
chr4 (201-337)||(14351844-14351977)
chr4 (219-354)||(21067314-21067450)
chr4 (226-354)||(13266118-13266247)
chr4 (222-337)||(17628560-17628676)
chr4 (267-387)||(41869917-41870037)
chr4 (225-386)||(31817376-31817538)
chr4 (222-354)||(17029362-17029495)
chr4 (223-338)||(33764908-33765024)
chr4 (226-354)||(43928943-43929071)
chr4 (271-350)||(23976244-23976323)
chr4 (226-320)||(27578436-27578531)
chr4 (300-391)||(53854861-53854952)
chr4 (222-326)||(20306139-20306241)
chr4 (276-361)||(42838648-42838733)
chr4 (222-353)||(4185748-4185880)
chr4 (222-336)||(17629018-17629132)
chr4 (222-259)||(14571663-14571700)
chr4 (222-353)||(17028907-17029039)
chr4 (323-391)||(20309595-20309663)
chr4 (222-261)||(11828460-11828499)
chr4 (271-376)||(9882619-9882722)
chr4 (272-355)||(26200311-26200396)
chr4 (279-355)||(24271583-24271659)
chr4 (300-375)||(2499648-2499723)
chr4 (222-257)||(27578261-27578296)
chr4 (270-311)||(39902477-39902518)
chr4 (271-347)||(45682242-45682318)
[»] chr3 (45 HSPs)
chr3 (222-354)||(28561778-28561911)
chr3 (222-354)||(31284257-31284390)
chr3 (219-350)||(20885095-20885227)
chr3 (222-350)||(13150080-13150209)
chr3 (222-350)||(11180015-11180144)
chr3 (226-386)||(27187315-27187476)
chr3 (222-354)||(32386715-32386848)
chr3 (222-350)||(39640973-39641102)
chr3 (222-338)||(13150535-13150652)
chr3 (219-391)||(25230683-25230856)
chr3 (219-391)||(25238270-25238443)
chr3 (181-386)||(30529687-30529888)
chr3 (222-350)||(32227536-32227665)
chr3 (219-338)||(25238662-25238782)
chr3 (201-334)||(4067324-4067454)
chr3 (222-350)||(14813985-14814114)
chr3 (222-386)||(16811381-16811546)
chr3 (219-391)||(25230226-25230399)
chr3 (219-391)||(25237813-25237986)
chr3 (222-350)||(32227202-32227331)
chr3 (222-348)||(50347784-50347911)
chr3 (222-354)||(39653196-39653329)
chr3 (219-386)||(25248111-25248279)
chr3 (225-351)||(41472336-41472462)
chr3 (222-354)||(8067312-8067445)
chr3 (242-386)||(32796936-32797081)
chr3 (219-354)||(2911127-2911263)
chr3 (221-354)||(7493913-7494047)
chr3 (234-350)||(25239070-25239187)
chr3 (219-375)||(37045046-37045203)
chr3 (222-337)||(29224373-29224489)
chr3 (223-329)||(14820211-14820318)
chr3 (219-354)||(7477223-7477359)
chr3 (219-350)||(25802526-25802658)
chr3 (185-350)||(25802952-25803114)
chr3 (223-386)||(41473997-41474161)
chr3 (225-386)||(16810925-16811087)
chr3 (271-382)||(31103991-31104102)
chr3 (272-337)||(26310021-26310086)
chr3 (269-318)||(3890046-3890095)
chr3 (222-318)||(3899868-3899965)
chr3 (223-259)||(15381258-15381294)
chr3 (223-259)||(15396493-15396529)
chr3 (223-259)||(15410629-15410665)
chr3 (305-337)||(47518384-47518416)
[»] chr8 (47 HSPs)
chr8 (222-361)||(22548976-22549116)
chr8 (222-354)||(22026411-22026544)
chr8 (219-386)||(6464888-6465056)
chr8 (222-351)||(17103116-17103246)
chr8 (222-350)||(12827235-12827364)
chr8 (222-354)||(27925931-27926064)
chr8 (222-354)||(41659086-41659219)
chr8 (219-386)||(2044058-2044226)
chr8 (227-354)||(10844915-10845043)
chr8 (222-361)||(22548530-22548670)
chr8 (225-353)||(10844599-10844728)
chr8 (222-359)||(25147563-25147701)
chr8 (222-354)||(25144804-25144937)
chr8 (222-350)||(27022319-27022448)
chr8 (219-350)||(8080320-8080452)
chr8 (222-386)||(34308460-34308625)
chr8 (219-354)||(32292429-32292565)
chr8 (222-351)||(12100726-12100856)
chr8 (219-360)||(33852236-33852378)
chr8 (183-354)||(28453370-28453538)
chr8 (219-353)||(41913003-41913138)
chr8 (172-337)||(27819181-27819343)
chr8 (226-333)||(25148020-25148128)
chr8 (220-321)||(21316088-21316190)
chr8 (222-336)||(34308916-34309035)
chr8 (177-342)||(15818956-15819117)
chr8 (229-375)||(28375042-28375189)
chr8 (226-343)||(3745144-3745262)
chr8 (242-350)||(22840530-22840639)
chr8 (270-337)||(27021909-27021976)
chr8 (222-375)||(6466722-6466871)
chr8 (270-361)||(30334938-30335029)
chr8 (226-308)||(31283636-31283719)
chr8 (220-393)||(1297000-1297174)
chr8 (237-350)||(3744674-3744788)
chr8 (219-342)||(15567534-15567658)
chr8 (276-350)||(22705208-22705282)
chr8 (220-324)||(30527461-30527566)
chr8 (271-335)||(15568036-15568100)
chr8 (289-350)||(29971450-29971511)
chr8 (132-174)||(17103335-17103377)
chr8 (275-333)||(17429553-17429611)
chr8 (132-169)||(10844466-10844503)
chr8 (279-336)||(36968434-36968491)
chr8 (219-263)||(10729747-10729791)
chr8 (225-375)||(6466268-6466418)
chr8 (219-256)||(25307895-25307932)
[»] chr5 (43 HSPs)
chr5 (219-386)||(39146939-39147107)
chr5 (222-375)||(2193827-2193981)
chr5 (222-391)||(17445436-17445606)
chr5 (222-354)||(8642015-8642148)
chr5 (219-391)||(10927381-10927554)
chr5 (222-337)||(2474008-2474124)
chr5 (222-347)||(2474444-2474570)
chr5 (219-354)||(1821938-1822074)
chr5 (219-350)||(10926924-10927056)
chr5 (222-345)||(42788627-42788751)
chr5 (222-355)||(21886127-21886261)
chr5 (222-386)||(189068-189233)
chr5 (222-348)||(34372106-34372233)
chr5 (222-351)||(3887038-3887168)
chr5 (222-391)||(8391303-8391472)
chr5 (172-350)||(27646770-27646945)
chr5 (226-354)||(34867822-34867951)
chr5 (222-351)||(34371647-34371777)
chr5 (219-391)||(20039453-20039625)
chr5 (222-354)||(22556568-22556701)
chr5 (222-354)||(22557001-22557134)
chr5 (222-348)||(3886582-3886709)
chr5 (225-391)||(15512996-15513164)
chr5 (182-350)||(29680052-29680210)
chr5 (222-355)||(30719786-30719920)
chr5 (222-391)||(30684537-30684707)
chr5 (222-350)||(18304467-18304596)
chr5 (222-354)||(18750177-18750310)
chr5 (226-361)||(42429170-42429306)
chr5 (222-332)||(20858522-20858633)
chr5 (272-395)||(24182277-24182400)
chr5 (240-386)||(4657992-4658138)
chr5 (271-337)||(16370739-16370805)
chr5 (226-306)||(11757266-11757347)
chr5 (280-332)||(2058696-2058748)
chr5 (236-338)||(4673466-4673569)
chr5 (219-329)||(5066869-5066980)
chr5 (272-338)||(11160713-11160779)
chr5 (132-174)||(17445306-17445348)
chr5 (271-353)||(43356651-43356732)
chr5 (222-259)||(4102924-4102961)
chr5 (306-386)||(22975076-22975156)
chr5 (276-355)||(39801498-39801578)
[»] chr2 (38 HSPs)
chr2 (220-391)||(16379388-16379560)
chr2 (222-350)||(8256562-8256691)
chr2 (222-354)||(41754321-41754454)
chr2 (220-386)||(33174958-33175124)
chr2 (225-350)||(29804718-29804844)
chr2 (219-391)||(33174500-33174671)
chr2 (219-375)||(16378948-16379105)
chr2 (222-386)||(24818326-24818491)
chr2 (222-354)||(25337978-25338111)
chr2 (223-351)||(30966269-30966398)
chr2 (222-348)||(30966728-30966855)
chr2 (219-361)||(1707066-1707209)
chr2 (222-350)||(11388224-11388352)
chr2 (222-350)||(33771037-33771166)
chr2 (222-350)||(11394571-11394698)
chr2 (220-350)||(1912561-1912691)
chr2 (222-336)||(5399798-5399913)
chr2 (221-375)||(25434036-25434191)
chr2 (185-386)||(27882874-27883072)
chr2 (226-386)||(29259605-29259766)
chr2 (219-338)||(38898890-38899010)
chr2 (223-395)||(83008-83181)
chr2 (224-375)||(8073903-8074055)
chr2 (237-391)||(18098874-18099029)
chr2 (271-354)||(1953187-1953270)
chr2 (224-337)||(30963703-30963817)
chr2 (276-391)||(18447954-18448069)
chr2 (184-354)||(15619930-15620097)
chr2 (225-337)||(13191023-13191136)
chr2 (222-337)||(30963244-30963360)
chr2 (271-354)||(20502055-20502138)
chr2 (226-329)||(30961868-30961972)
chr2 (271-338)||(16542033-16542100)
chr2 (184-321)||(15639799-15639933)
chr2 (283-335)||(8181394-8181446)
chr2 (271-335)||(36924453-36924519)
chr2 (222-263)||(32377697-32377738)
chr2 (222-255)||(32377888-32377921)
[»] scaffold0499 (2 HSPs)
scaffold0499 (222-375)||(2032-2186)
scaffold0499 (132-174)||(1902-1944)
[»] scaffold0020 (1 HSPs)
scaffold0020 (222-386)||(107444-107609)
[»] scaffold0002 (1 HSPs)
scaffold0002 (222-350)||(154793-154922)
[»] scaffold0243 (1 HSPs)
scaffold0243 (222-353)||(1253-1385)
[»] scaffold0322 (1 HSPs)
scaffold0322 (222-387)||(18965-19131)
[»] chr6 (48 HSPs)
chr6 (222-387)||(13191494-13191660)
chr6 (222-387)||(17027512-17027678)
chr6 (222-375)||(20850332-20850486)
chr6 (222-386)||(9352062-9352227)
chr6 (222-386)||(16519968-16520133)
chr6 (222-350)||(20896669-20896798)
chr6 (226-361)||(13492814-13492950)
chr6 (220-350)||(6330891-6331022)
chr6 (222-354)||(7911910-7912043)
chr6 (219-386)||(20126160-20126328)
chr6 (219-361)||(11062310-11062453)
chr6 (225-354)||(2890823-2890953)
chr6 (222-354)||(7912342-7912475)
chr6 (239-391)||(3652481-3652634)
chr6 (222-375)||(21311982-21312136)
chr6 (222-391)||(23986298-23986468)
chr6 (222-350)||(23776477-23776605)
chr6 (231-350)||(2681206-2681326)
chr6 (222-386)||(17731090-17731259)
chr6 (218-395)||(20735686-20735864)
chr6 (219-354)||(2720541-2720678)
chr6 (219-350)||(14771697-14771829)
chr6 (234-348)||(15929620-15929735)
chr6 (222-321)||(13492397-13492497)
chr6 (219-354)||(17851406-17851542)
chr6 (219-386)||(21311515-21311683)
chr6 (219-351)||(20732613-20732746)
chr6 (247-354)||(27334193-27334301)
chr6 (247-354)||(27394933-27395041)
chr6 (222-354)||(9440290-9440423)
chr6 (185-354)||(33774950-33775118)
chr6 (219-354)||(17850950-17851086)
chr6 (248-350)||(15929235-15929338)
chr6 (226-354)||(9440842-9440971)
chr6 (271-391)||(31821723-31821843)
chr6 (222-290)||(28780206-28780275)
chr6 (226-354)||(32292917-32293044)
chr6 (185-352)||(1991587-1991751)
chr6 (300-354)||(9440488-9440542)
chr6 (222-391)||(12194325-12194493)
chr6 (220-337)||(17205388-17205505)
chr6 (223-336)||(28583013-28583127)
chr6 (286-379)||(10964312-10964404)
chr6 (271-354)||(30729870-30729953)
chr6 (271-321)||(28065869-28065919)
chr6 (219-252)||(3652658-3652691)
chr6 (301-354)||(9441082-9441135)
chr6 (219-263)||(2891271-2891315)
[»] scaffold0040 (3 HSPs)
scaffold0040 (222-354)||(2191-2324)
scaffold0040 (130-174)||(2059-2103)
scaffold0040 (132-169)||(2517-2554)
[»] scaffold0024 (1 HSPs)
scaffold0024 (222-387)||(105719-105885)
[»] scaffold0022 (4 HSPs)
scaffold0022 (222-351)||(162659-162789)
scaffold0022 (185-359)||(69763-69934)
scaffold0022 (222-287)||(163115-163181)
scaffold0022 (222-287)||(163170-163236)
[»] scaffold0018 (1 HSPs)
scaffold0018 (222-386)||(10300-10465)
[»] scaffold0047 (2 HSPs)
scaffold0047 (219-386)||(18113-18280)
scaffold0047 (220-375)||(17577-17733)
[»] scaffold0005 (3 HSPs)
scaffold0005 (228-375)||(245526-245674)
scaffold0005 (272-350)||(245122-245200)
scaffold0005 (222-259)||(245676-245713)
[»] scaffold0557 (1 HSPs)
scaffold0557 (219-338)||(2153-2273)
[»] scaffold0333 (2 HSPs)
scaffold0333 (222-353)||(4594-4726)
scaffold0333 (222-353)||(5049-5186)
[»] scaffold0088 (1 HSPs)
scaffold0088 (274-391)||(23668-23785)
[»] scaffold0007 (1 HSPs)
scaffold0007 (271-386)||(142305-142420)
[»] scaffold0664 (1 HSPs)
scaffold0664 (271-354)||(4013-4096)
[»] scaffold0391 (1 HSPs)
scaffold0391 (221-333)||(14794-14907)
[»] scaffold0389 (1 HSPs)
scaffold0389 (226-298)||(13518-13591)
[»] scaffold0277 (1 HSPs)
scaffold0277 (222-290)||(14683-14752)
[»] scaffold0101 (1 HSPs)
scaffold0101 (275-361)||(45411-45497)
[»] scaffold0137 (1 HSPs)
scaffold0137 (222-259)||(7070-7107)


Alignment Details
Target: chr1 (Bit Score: 415; Significance: 0; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 129 - 625
Target Start/End: Complemental strand, 12728250 - 12727753
Alignment:
Q  129 agatgtaacatctcagacgacttttaggattgtcgactgactccacgttttttgggaaacttctcagaaggccatccatccaaagactagctactccaag 228  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12728250 agatgtaacatctcagacgactttcaggattgtcgactgactccacgttttttgggaaacttctcagaaggccacccatccaaagactagctactccaag 12728151  T
Q  229 tcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagta-ccaaacaattcttataagtcttc 326  Q
    ||||||| |||||||||||||||||||||||||||| | || |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  12728150 tcaagcatgcttaactgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataagtcttc 12728051  T
Q  327 cttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggttgcctcgtcagcctcagacgttacatgaggggagtt 426  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  12728050 cttcaaccatgttgtcccatacctacacagtctcagaatccctttcatttcaatgtgattcggttgcctcgtcagcctcagacgttacataaggggagtt 12727951  T
Q  427 aggtgatagtgcagaagttaagagaggagtaagtattagtctattgagttgagttatcaaagttcacttatcatattgtaattaagagtaaaaagaacac 526  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  12727950 aggtgatagtgcagaagttaagagaggagtaagcattagtctattgagttgagttatcaaacttcacttataatattgtaattaagagtaaaaagaacac 12727851  T
Q  527 tttaatgccctgttttactttctgtgttttgattttattttatctttcaactgataaacctaaaagataaagatccaaaatctcctccaccactgtctt 625  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  12727850 -ttaatgccctgttttactttctgtgttttgattttattttatctttcaactgataaatctaaaagataaagatccaaaatctcctccaccattgtctt 12727753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20054517 - 20054650
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20054517 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20054616  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  20054617 gccttccttcaaccatgcagtcccatacctgcac 20054650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20054973 - 20055106
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20054973 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20055072  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  20055073 gccttccttcaaccatgcagtcccatacctgcac 20055106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20055429 - 20055562
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20055429 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20055528  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  20055529 gccttccttcaaccatgcagtcccatacctgcac 20055562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20055885 - 20056018
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20055885 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20055984  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  20055985 gccttccttcaaccatgcagtcccatacctgcac 20056018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20056341 - 20056474
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20056341 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20056440  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  20056441 gccttccttcaaccatgcagtcccatacctgcac 20056474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20057244 - 20057377
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20057244 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20057343  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  20057344 gccttccttcaaccatgcagtcccatacctgcac 20057377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20054061 - 20054194
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||| |||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20054061 ctcctagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20054160  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  20054161 gccttccttcaaccatgcagtcccatacctgcac 20054194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20057700 - 20057833
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20057700 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20057799  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||| ||||||||||  |||||||||||||||    
T  20057800 gccttctttcaaccatgcagtcccatacctgcac 20057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 221 - 391
Target Start/End: Original strand, 43057503 - 43057674
Alignment:
Q  221 actccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttata 319  Q
    |||||||||||| ||||||||||||||||||||||||||||||  | || |||||||||||||||||| || ||||||| ||||||||||||||||||||    
T  43057503 actccaagtcaatcacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttata 43057602  T
Q  320 agtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    || |||||||||||||||| ||| ||||||| ||| | ||||  |||||| ||||| | |||||||| ||||    
T  43057603 agccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattccgatgtgattcggtt 43057674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 50002266 - 50002436
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||| || |||||||||||||||||||||||  | || |||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  50002266 ctccaagtcaagcacactcaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataa 50002365  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    | |||||||||||||||| ||||||| ||| ||| | ||||| |||||| ||||| | |||||||| ||||    
T  50002366 gccttccttcaaccatgtagtcccatgcctacacggcctcatgatccctctcattccgatgtgattcggtt 50002436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 20845642 - 20845775
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  20845642 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataa 20845741  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  ||| |||||||||||    
T  20845742 gccttccttcaaccatgcagtctcatacctgcac 20845775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 38341071 - 38340938
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||| |||||||||||||||  | || |||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  38341071 ctccaagtcaagcacgcttaactgtgaagttcttatggaatgagctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataa 38340972  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  38340971 gccttccttcaaccatgcagtcccatacctgcac 38340938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 225 - 375
Target Start/End: Complemental strand, 52250368 - 52250217
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    |||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||| |    
T  52250368 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcc 52250269  T
Q  324 ttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    ||||||| ||||||| ||||||||||| ||  | ||||| |||||| |||||    
T  52250268 ttccttcgaccatgtagtcccatacctacaaggcctcatgatccctctcatt 52250217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 222 - 391
Target Start/End: Complemental strand, 16907399 - 16907229
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| ||||||||||| |||||||||| | |||||  | ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  16907399 ctccaagtcaaacacgcttaactatggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataa 16907300  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    | |||| ||||||||||  ||  |||||||||||||||||| ||||||| ||||||  || ||||||||||    
T  16907299 gccttctttcaaccatgcagtttcatacctgcacagtctcaaaatccctctcattttgatatgatttggtt 16907229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 16451914 - 16452043
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  16451914 ctccaagtcaagcacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 16452013  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |  ||||||||||||||| ||||| |||||    
T  16452014 gctttccttcaaccatgtagtcccctacct 16452043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 16461067 - 16461196
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  16461067 ctccaagtcaagcacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 16461166  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |  ||||||||||||||| ||||| |||||    
T  16461167 gctttccttcaaccatgtagtcccctacct 16461196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 386
Target Start/End: Original strand, 35759589 - 35759754
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||| |||||| || |||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  35759589 ctccaagtcaagcacgtttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 35759688  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |  ||||||||||||||  ||||||||||||||| | ||||  |||||| ||||| | ||||||||    
T  35759689 gctttccttcaaccatgcagtcccatacctgcacggcctcaggatccctctcattccgatgtgatt 35759754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 220 - 386
Target Start/End: Complemental strand, 2635091 - 2634924
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||  | || |||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  2635091 tactccaagccaaacacgcttaactgtggagttcttattgaatgagctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttat 2634992  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
     |||  |||||||||||||  ||||||||||||||||  ||||| |||||| ||||| | ||||||||    
T  2634991 gagttatccttcaaccatgcagtcccatacctgcacaacctcatgatccctctcattccgatgtgatt 2634924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 20056797 - 20056926
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| ||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  20056797 ctccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataa 20056896  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||| ||  |||||||||||    
T  20056897 gccttccttcaaccctgcagtcccatacct 20056926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 239 - 386
Target Start/End: Complemental strand, 2328463 - 2328315
Alignment:
Q  239 ttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||||||||||||||||||| | ||  ||||||||||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||||    
T  2328463 ttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatg 2328364  T
Q  338 ttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
      |||||||||||| || | ||||||||  || ||||| ||||||||||    
T  2328363 cagtcccatacctgtacggcctcataatttctctcattccaatgtgatt 2328315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 182 - 350
Target Start/End: Original strand, 43057010 - 43057175
Alignment:
Q  182 gggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagat 280  Q
    |||||||||| ||| ||| || |||||||||||| |    ||| ||||||| ||||||||||||||||||||||||||||||  | || |||||||||||    
T  43057010 gggaaacttcccagtaggtcacccatccaaagacca----ctctaagtcaatcacgcttaactgtggagttcttatggaatgggctaccgaaaagaagat 43057105  T
Q  281 gcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    ||||||| |||||||||| |||| |||||||||||| |||| |||||||||||||||| ||| |||||||    
T  43057106 gcatcttgttgatataggtagtatcaaacaattcttctaagccttccttcaaccatgtagtcacatacct 43057175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 181 - 356
Target Start/End: Complemental strand, 12883726 - 12883554
Alignment:
Q  181 tgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaaga 279  Q
    ||||||||||| ||| ||| |||||||||||| ||||    || |||||||| ||| ||||||||||||||| ||||||||||  | ||  ||||||| |    
T  12883726 tgggaaacttcccagtaggtcatccatccaaaaacta----cttcaagtcaaacacacttaactgtggagtttttatggaatgagctaccaaaaagaaaa 12883631  T
Q  280 tgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacag 356  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||    
T  12883630 tgcatcttgttgatataggtagtaccaaacaattcttataagtattccttcaatcatgcagtcccatacctgcacag 12883554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 50003056 - 50003226
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||| ||||||| |||||||  | ||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||    
T  50003056 ctccaagtcaagcacgcttaactgtgaagttcttttggaatgagctactgaaaagaagatgcatcttgttgatataggtagtacccaacaattattataa 50003155  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||| |||| |||||||  |||| |||||||||  | ||||  |||||| ||||| | |||||||| ||||    
T  50003156 gtctccctttaaccatgcagtcctatacctgcatggcctcaggatccctctcattccgatgtgattcggtt 50003226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 20061188 - 20061305
Alignment:
Q  238 cttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccat 336  Q
    ||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||    
T  20061188 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 20061287  T
Q  337 gttgtcccatacctgcac 354  Q
    |  |||||||||||||||    
T  20061288 gcagtcccatacctgcac 20061305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 386
Target Start/End: Original strand, 35760895 - 35761060
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||  |||||||| ||||||||  | ||  ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  35760895 ctccaagtcaagcacgcttaactacggagttctcatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 35760994  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |  ||||||||||||||  ||| ||||||||||| | ||||  |||||| ||||| | ||||||||    
T  35760995 gctttccttcaaccatgcagtctcatacctgcacggcctcaggatccctctcattccgatgtgatt 35761060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 184 - 375
Target Start/End: Original strand, 30872897 - 30873085
Alignment:
Q  184 gaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgc 282  Q
    ||||||| |||| ||| || ||||||||||||||    || ||||||||||| |||||| |||||||||||||| |||||  | ||  ||||||||||||    
T  30872897 gaaacttttcagtaggtcacccatccaaagacta----ctgcaagtcaagcatgcttaattgtggagttcttatagaatggactaccaaaaagaagatgc 30872992  T
Q  283 atcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||||||||||||||   ||| ||||||||||| | |||| ||||||| |||||    
T  30872993 atcttgttgatataggtagtatcaaacaattcttaaaagtcttccttcaaccatacagtctcatacctgcacggcctcagaatccctctcatt 30873085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 223 - 393
Target Start/End: Original strand, 31822645 - 31822816
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    ||||||||||  ||||||||||||||||||||| |||| ||  | || ||||||||||||||| || |||||||| | ||||||||| |||||||||||     
T  31822645 tccaagtcaaaaacgcttaactgtggagttcttttggattgagctaccgaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataaa 31822744  T
Q  322 tcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggttgc 393  Q
    ||||||||||||||||| ||| ||||||| ||| | ||||| |||||| |||||   |||||||||||||||    
T  31822745 tcttccttcaaccatgtagtctcatacctacacggcctcatgatccctctcattctgatgtgatttggttgc 31822816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 20060322 - 20060431
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||||||||||||| ||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  20060322 tccaagtcaagcacacttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 20060421  T
Q  322 tcttccttca 331  Q
      ||||||||    
T  20060422 ctttccttca 20060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 222 - 346
Target Start/End: Original strand, 50002688 - 50002813
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| ||||||||||| |||||||||||  |||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  50002688 ctccaagtcaaacacgcttaactatggagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 50002787  T
Q  321 gtcttccttcaaccatgttgtcccat 346  Q
    | |||||||||||||||  |||||||    
T  50002788 gccttccttcaaccatgcagtcccat 50002813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 182 - 386
Target Start/End: Complemental strand, 7548292 - 7548091
Alignment:
Q  182 gggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagat 280  Q
    |||||||||||| | ||| || ||||||||||||||    |||||||||||| |||||||| ||||||||||||||  ||||  | ||  ||||||| ||    
T  7548292 gggaaacttctcggtaggtcacccatccaaagacta----ctccaagtcaagtacgcttaattgtggagttcttatcaaatgggctaccaaaaagaatat 7548197  T
Q  281 gcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaat 380  Q
    ||||||| |||||||||  | |||||||||||| ||||||||||||||| || ||||| ||| ||||||| ||| | ||||| |||||| ||||| ||||    
T  7548196 gcatcttgttgatatagttaataccaaacaatttttataagtcttcctttaatcatgtagtctcatacctacacggcctcatgatccctctcattgcaat 7548097  T
Q  381 gtgatt 386  Q
    ||||||    
T  7548096 gtgatt 7548091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12728376 - 12728309
Alignment:
Q  1 aaataaatgctcaagttaggttatgtctttctcattttggacaatacttaaatgcactatttaggtgc 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12728376 aaataaatgctcaagttaggttatgtctttctcattttggacaatacttaaatgcactatttaggtgc 12728309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 46693716 - 46693831
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    || |||||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  46693716 ctccaagtcaagcacgcttaactgtggagttattatgaaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataa 46693815  T
Q  321 gtcttccttcaaccat 336  Q
    | ||||||||||||||    
T  46693816 gccttccttcaaccat 46693831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 226 - 336
Target Start/End: Original strand, 51372859 - 51372970
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||||||||||||||||||||||  | || ||||| |||||||||||| | |||||||| ||||| |||||||||||||||| ||    
T  51372859 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagcct 51372958  T
Q  325 tccttcaaccat 336  Q
    ||||||||||||    
T  51372959 tccttcaaccat 51372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 223 - 391
Target Start/End: Complemental strand, 10820758 - 10820587
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatg-----tcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||||||||| | |||||||| ||||     ||||   |||| |||||| |||||||||||||||| ||||||||||||||||||    
T  10820758 tccaagtcaagcacgcttaactgtgaatttcttatgaaatgagtcatcgaa--aaaaaaagatgtatcttattgatataggtagtaccaaacaattctta 10820661  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||| ||||||||||||||||| |||| |||| | ||| | |||||||||||| ||| | | |||||||| ||||    
T  10820660 taaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcactccgatgtgattcggtt 10820587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 23180895 - 23180730
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||| |||||| |||||||||||||  | |  ||| ||||||| |||||| |||||||||| |||||||| ||||||||||||    
T  23180895 ctccaagtcaagcacgcttaattgtggaattcttatggaatgggctagcgaatagaagatacatcttgttgatataggtagtaccaagcaattcttataa 23180796  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
       |||||||||||| || ||||||| ||| ||| |  |||  |||||| ||||| ||||||||||    
T  23180795 tcattccttcaaccacgtagtcccattcctacacggcttcaagatccctctcattccaatgtgatt 23180730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 329
Target Start/End: Complemental strand, 2634672 - 2634523
Alignment:
Q  177 tttttgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaag 275  Q
    ||||||| ||||||| ||||| | |||||||||||||||||    |||||||||||||||| ||||| ||| ||||||||| |||| | | |  ||||||    
T  2634672 tttttggaaaacttcccagaatgtcatccatccaaagacta----ctccaagtcaagcacgtttaacagtgaagttcttattgaatagactatcgaaaag 2634577  T
Q  276 aagatgcatcttattgatataggcagtaccaaacaattcttataagtcttcctt 329  Q
    |||||||||||| ||  |||||  |||||||||||||||||  ||| |||||||    
T  2634576 aagatgcatcttgtttgtatagctagtaccaaacaattcttgcaagccttcctt 2634523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 52250705 - 52250642
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatctt 287  Q
    |||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||||    
T  52250705 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatctt 52250642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 52251042 - 52250979
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatctt 287  Q
    |||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||||    
T  52251042 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatctt 52250979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 35009974 - 35010018
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatg 263  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  35009974 ctactccaagtcaagcacgcttaaccgtggagttcttatggaatg 35010018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 16440610 - 16440687
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatac 348  Q
    ||||||| ||||||||| ||| ||| || |||| |||||| |||||||||||||| ||||||||||||  ||||||||    
T  16440610 aaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataagtctttcttcaaccatgtattcccatac 16440687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 31823115 - 31823161
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  31823115 aaaagaagatgcattttattgatataggtagtaccaaataattctta 31823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 42317709 - 42317616
Alignment:
Q  302 taccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggttgcct 395  Q
    ||||||||||||||||||||  |||||| |||| ||   || ||||| | ||||||||||||| |||| |||||||||| ||||  ||||||||    
T  42317709 taccaaacaattcttataagcattcctttaaccgtgcaatctcatacatacacagtctcataacccctctcatttcaatatgatccggttgcct 42317616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 46411173 - 46411228
Alignment:
Q  279 atgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaacc 334  Q
    |||||||||||||||||||| ||||||||| |||||||| || | || ||||||||    
T  46411173 atgcatcttattgatataggtagtaccaaataattcttaaaaatttttcttcaacc 46411228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 380
Target Start/End: Original strand, 842964 - 843073
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctt 370  Q
    ||||||| ||||||||| |||  || |  |||||||||||||||||| | | |||||||||| ||||  | | ||||||| |||  |||||| ||||||     
T  842964 aaaagaacatgcatcttgttggaatggatagtaccaaacaattcttacacgacttccttcaatcatgcagacacatacctacacgatctcatgatccctc 843063  T
Q  371 tcatttcaat 380  Q
    ||||||||||    
T  843064 tcatttcaat 843073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 1e-49; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 220 - 391
Target Start/End: Original strand, 6719053 - 6719225
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  6719053 tactccaagtcaagcacgcttaactctggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttat 6719152  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||  ||||||||||||||| ||||||||||| ||||| ||||  |||||| ||||| |||||||||| ||||    
T  6719153 aagcattccttcaaccatgtagtcccatacctacacagcctcaggatccctctcattccaatgtgattcggtt 6719225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 28496019 - 28495854
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| |||| |||||||||    
T  28496019 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataa 28495920  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | |||||||||||||||| ||||||||||| ||| | ||||  |||||| ||||| | ||||||||    
T  28495919 gccttccttcaaccatgtagtcccatacctacacggcctcaagatccctctcattccgatgtgatt 28495854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 222 - 353
Target Start/End: Original strand, 13125117 - 13125249
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  13125117 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataa 13125216  T
Q  321 gtcttccttcaaccatgttgtcccatacctgca 353  Q
    | |||||||||||||||  ||||||||||||||    
T  13125217 gccttccttcaaccatgcagtcccatacctgca 13125249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 219 - 386
Target Start/End: Complemental strand, 42515260 - 42515092
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  42515260 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattctta 42515161  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||||||||||||||| ||||  ||| ||||||||||| | ||||  |||||| ||||| | ||||||||    
T  42515160 taagtcttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattccgatgtgatt 42515092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 351
Target Start/End: Original strand, 2941738 - 2941868
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||||| |    
T  2941738 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatca 2941837  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    | |||||||||||||||  ||||||||||||    
T  2941838 gccttccttcaaccatgcagtcccatacctg 2941868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 375
Target Start/End: Complemental strand, 42515709 - 42515555
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  42515709 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataa 42515610  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    | |||||||||||||||| ||| ||||||| ||| | ||||  |||||| |||||    
T  42515609 gccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcatt 42515555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 346
Target Start/End: Complemental strand, 2465898 - 2465773
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  2465898 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataa 2465799  T
Q  321 gtcttccttcaaccatgttgtcccat 346  Q
    | |||||||||||||||| |||||||    
T  2465798 gccttccttcaaccatgtagtcccat 2465773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 2466089 - 2465960
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||| ||| |||||||||| |||||||||||| ||||||||    
T  2466089 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataa 2465990  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  2465989 gccttccttcaaccatgtagtcccatacct 2465960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 34405572 - 34405701
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||| | |||||||||| |||||| ||||||||||||||    
T  34405572 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataa 34405671  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  34405672 gccttccttcaaccatgtagtcccatacct 34405701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 36422417 - 36422288
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  36422417 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 36422318  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  36422317 gccttccttcaaccatgtagtcccatacct 36422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 177 - 361
Target Start/End: Complemental strand, 25182567 - 25182386
Alignment:
Q  177 tttttgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaag 275  Q
    |||||| |||||||| ||||||| | |||||||||||||||    ||||||||||| ||| |||||||||| |||||||||||||||    || |||||     
T  25182567 tttttgagaaacttcccagaaggtcctccatccaaagacta----ctccaagtcaaacacacttaactgtgaagttcttatggaatgagttaccgaaaat 25182472  T
Q  276 aagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||    
T  25182471 aagatgtatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacttgcacagtctca 25182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 222 - 361
Target Start/End: Complemental strand, 2193421 - 2193281
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||| ||||||||||||||||||||||||| |||| ||||  | || ||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  2193421 ctccaaatcaagcacgcttaactgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 2193322  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    | |||||||||||||||  ||||||||||||||| ||||||    
T  2193321 gccttccttcaaccatgcagtcccatacctgcacggtctca 2193281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 219 - 386
Target Start/End: Complemental strand, 46425909 - 46425741
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||     || |||||||||||||||||| |||||||||| | ||||||||||||||||    
T  46425909 ctactccaagtcaagcacgcttaactgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatataggtaataccaaacaattctta 46425810  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| |||  ||||||||||| ||||||||||| ||  ||||||  |||||| ||||| | ||||||||    
T  46425809 taagccttatttcaaccatgtagtcccatacctacatggtctcaggatccctctcattccgatgtgatt 46425741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 226 - 386
Target Start/End: Original strand, 6747583 - 6747744
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||||||||||| ||||||||| | | ||  ||||||||||||||||| |||||||||| |||||||||||||||||||||  ||    
T  6747583 aagtcaagcacgcttaactgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatcct 6747682  T
Q  325 tccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||||||||||||| ||  ||||||| ||| | ||||  |||||| ||||| ||||||||||    
T  6747683 tccttcaaccatgtagtatcatacctacacggcctcaggatccctctcattccaatgtgatt 6747744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 28495589 - 28495718
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| |  ||  ||||||||||||||    
T  28495589 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatataggtaaaactcaacaattcttataa 28495688  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||||||||| |||||||||||    
T  28495689 gtcttccttcaaccatgtagtcccatacct 28495718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 222 - 361
Target Start/End: Complemental strand, 2189309 - 2189169
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | |  |||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  2189309 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataa 2189210  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    | |||| ||||||||||  |||||| |||||||||| ||||    
T  2189209 gccttctttcaaccatgcagtcccacacctgcacagcctca 2189169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 35474099 - 35474231
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||| | ||||| ||||||||||||    
T  35474099 ctactccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataagtagtactaaacaattctta 35474198  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||| |||||||||||| ||| |||||||    
T  35474199 taagtctttcttcaaccatgtagtctcatacct 35474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 9125124 - 9124991
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||| |||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  9125124 ctccgagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 9125025  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |  |||||| ||||||   ||| |||||||||||    
T  9125024 gctttcctttaaccatacagtctcatacctgcac 9124991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 350
Target Start/End: Complemental strand, 679984 - 679853
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||| ||||||||| |||||||||| |||||||| |||||||||    
T  679984 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatataggtagtaccaa-caattctta 679886  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    |||| ||||||||| ||||||  ||||||||||    
T  679885 taagccttccttcagccatgtactcccatacct 679853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 35527099 - 35527216
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||  | ||||||||||| ||||||||| |||||||||| || |||||||||||||||    
T  35527099 ctactccaagtcaagcatgcttaactgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatataggtagcaccaaacaattctta 35527198  T
Q  318 taagtcttccttcaacca 335  Q
    |||| |||| ||||||||    
T  35527199 taagccttctttcaacca 35527216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 22529182 - 22529343
Alignment:
Q  184 gaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgc 282  Q
    |||||||||||| ||| || ||||||||||||||    ||||||||||| |||||||||||||| ||||||| || ||||    ||||||||||||||||    
T  22529182 gaaacttctcagtaggtcacccatccaaagacta----ctccaagtcaaacacgcttaactgtgaagttcttttgtaatgagttactgaaaagaagatgc 22529277  T
Q  283 atcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatac 348  Q
    ||||| || ||||||  ||||||||||| |||||||||| |||||||||||||||| | |||||||    
T  22529278 atcttgtttatatagatagtaccaaacatttcttataagccttccttcaaccatgtaggcccatac 22529343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 5406573 - 5406702
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||||||||||||||||||  ||  | ||  |||| |||||||||||| |||||||||| | ||||||||||||||||||| |||    
T  5406573 aagtcaagcacgcttaactgtggagttcttatggtttgggcaaccaaaaataagatgcatcttgttgatataggtaataccaaacaattcttataaatct 5406672  T
Q  325 tccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||  |||||||||| ||||    
T  5406673 tccttcaaccatgcagtcccataccggcac 5406702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 386
Target Start/End: Original strand, 11517386 - 11517534
Alignment:
Q  238 cttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccat 336  Q
    |||||||| |||||||||||||||||  | || |||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||||| |||||    
T  11517386 cttaactgcggagttcttatggaatgagctaccgaaaagtagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttc-accat 11517484  T
Q  337 gttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |  |||||||||||| || | ||||  |||||| ||||| | ||||||||    
T  11517485 gcagtcccatacctgtacggcctcaggatccctctcattccgatgtgatt 11517534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 2611630 - 2611762
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||  | ||  ||||||||||||||||| ||| |||||  ||||||||||||||||||    
T  2611630 ctactccaagtaaagcacgcttaactatggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattctta 2611729  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    |||| |||||||| ||||| | ||| |||||||    
T  2611730 taagccttccttccaccatatagtctcatacct 2611762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 185 - 337
Target Start/End: Complemental strand, 9623405 - 9623257
Alignment:
Q  185 aaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgca 283  Q
    ||||||||||||| | || |||||||||||||||    |||||||||| |||||||||||||||||||||||| |||||  | || | ||||||||||||    
T  9623405 aaacttctcagaacgtcacccatccaaagactag----tccaagtcaaacacgcttaactgtggagttcttatagaatgaactaccg-aaagaagatgca 9623311  T
Q  284 tcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||| ||||||||||  ||| ||||||||||||||||||  |||||| ||||||    
T  9623310 tcttgttgatataggtggtatcaaacaattcttataagtactccttctaccatg 9623257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 26421287 - 26421415
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    ||||| |||| |||| |||||||||||||||||||||||||  | || ||||| || ||||||||| |||||||||| |||| ||| |||||||||||||    
T  26421287 tccaattcaaacacgtttaactgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataag 26421386  T
Q  322 tcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||||||  || |||||||||    
T  26421387 tcttccttcaaccatactgacccatacct 26421415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 219 - 354
Target Start/End: Original strand, 29357434 - 29357570
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||| ||||||| |||| ||||||||| |||||||||| || |  | |  |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  29357434 ctactctaagtcaaacacggttaactgtgtagttcttatgaaacgggctatcgaaaagaagatgcatcttgttgatatagttagtaccaaacaattctta 29357533  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||   ||||||||||||||  |||||||||||||||    
T  29357534 taaacattccttcaaccatgcagtcccatacctgcac 29357570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 201 - 347
Target Start/End: Original strand, 29038984 - 29039127
Alignment:
Q  201 catccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcgactg---aaaagaagatgcatcttattgatatag 297  Q
    |||||||||||||||||    ||||||||||||||||||||| ||| ||||||||||||||||  || |    |||||||||||||| || |||||||||    
T  29038984 catccatccaaagacta----ctccaagtcaagcacgcttaaatgtagagttcttatggaatg--gattatcaaaaagaagatgcatgttgttgatatag 29039077  T
Q  298 gcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccata 347  Q
    | ||||||||||||||||| |||| || | ||||||||||| ||| ||||    
T  29039078 gtagtaccaaacaattcttgtaagcctccattcaaccatgtagtcacata 29039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 226 - 351
Target Start/End: Complemental strand, 18833447 - 18833321
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||| ||||||||||||||||||||||||| |||   | || |||||||||||||||||| |||||||||| ||||| ||||||||| ||||||  |    
T  18833447 aagtcaaacacgcttaactgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagctt 18833348  T
Q  325 tccttcaaccatgttgtcccatacctg 351  Q
    ||| |||||||||  || |||||||||    
T  18833347 tccctcaaccatgcagttccatacctg 18833321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 270 - 391
Target Start/End: Complemental strand, 43233529 - 43233408
Alignment:
Q  270 gaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccct 369  Q
    ||||| |||||||||||| |||||||||  |||||||||||||||||||||||||||||| ||||||   ||| ||||||| ||| | ||||| ||||||    
T  43233529 gaaaaaaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcctttaaccatacagtcacatacctacacggcctcatgatccct 43233430  T
Q  370 ttcatttcaatgtgatttggtt 391  Q
     |||||||  ||||||| ||||    
T  43233429 ctcatttcggtgtgattcggtt 43233408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 219 - 354
Target Start/End: Original strand, 26421738 - 26421874
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||| ||| ||| |||||||||||||| |||||||||||||||  | || ||||||||||| |||||| ||| |||||| |||||| |||||||||||    
T  26421738 ctactcgaagccaaacacgcttaactgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtatagggagtacctaacaattctta 26421837  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | || ||| |||||||||||  ||| ||||| |||||    
T  26421838 tgagccttacttcaaccatgcagtctcatacatgcac 26421874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 26957606 - 26957708
Alignment:
Q  289 ttgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttg 388  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||||| || |||||||| ||||| ||||  |||||| ||||| | |||||||| |    
T  26957606 ttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatgtgattcg 26957705  T
Q  389 gtt 391  Q
    |||    
T  26957706 gtt 26957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 231 - 336
Target Start/End: Original strand, 31406574 - 31406680
Alignment:
Q  231 aagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttcctt 329  Q
    |||||||||||||||||||||||||||| || |  | || |||||||||||||||||| |||||||||| |  ||||||||||||| ||||||| || ||    
T  31406574 aagcacgcttaactgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataagtcatcttt 31406673  T
Q  330 caaccat 336  Q
    |||||||    
T  31406674 caaccat 31406680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 234 - 354
Target Start/End: Original strand, 36015404 - 36015525
Alignment:
Q  234 cacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaa 332  Q
    |||| ||||||||| |||||||||||||||  | | | ||||||||| ||||||| |||||||| | ||||||||||||||||| ||||  |||||||||    
T  36015404 cacgtttaactgtgaagttcttatggaatgggctatttaaaagaagaggcatcttgttgatatatgtagtaccaaacaattcttttaagctttccttcaa 36015503  T
Q  333 ccatgttgtcccatacctgcac 354  Q
    |||||  ||| ||||| |||||    
T  36015504 ccatggagtctcatacttgcac 36015525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 13122486 - 13122561
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatata 296  Q
    |||||| |||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| || |||||    
T  13122486 ctccaaatcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 13122561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 7646459 - 7646525
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatctt 287  Q
    |||||||||||||||||||||||||| |||||||||||||||  | || ||||||||||||||||||    
T  7646459 ctccaagtcaagcacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatctt 7646525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 386
Target Start/End: Original strand, 13124761 - 13124847
Alignment:
Q  300 agtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||||||| |||||||||||||| |||||||||||||||  ||||||||||||||| | ||||  |||||| ||||| |||| |||||    
T  13124761 agtaccacacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattccaatatgatt 13124847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 7646580 - 7646539
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg 263  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7646580 ctccaagtcaagcacgcttaactgtggagttcttatggaatg 7646539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 43776271 - 43776312
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg 263  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43776271 ctccaagtcaagcacgcttaactgtggagttcttatggaatg 43776312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 31743854 - 31743921
Alignment:
Q  270 gaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||||||||||| |||||||||  || ||||||| |||||||||||  ||||||||||||||    
T  31743854 gaaaagaagatgcatcttgttgatatagatagcaccaaaccattcttataagcattccttcaaccatg 31743921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 20966213 - 20966087
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    ||||||| ||| | ||||||||| |||||||||||||||  | || ||||| || || |||||| ||| |||||| | ||| ||| ||||||||||||||    
T  20966213 caagtcatgcatgtttaactgtgaagttcttatggaatgagctaccgaaaataatatacatcttgttggtataggtattacaaaataattcttataagtc 20966114  T
Q  324 ttccttcaaccatgttgtcccatacct 350  Q
     |||||||| ||||  ||| |||||||    
T  20966113 atccttcaatcatgcagtctcatacct 20966087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 3305374 - 3305463
Alignment:
Q  302 taccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||||||||||||| ||||| |||| ||||||||||| ||||||||| | ||| | ||||  |||||  ||||||| |||||||| ||||    
T  3305374 taccaaacaattctcataagccttcattcaaccatgtagtcccatacttacacggcctcaggatccccctcatttcgatgtgattcggtt 3305463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 11372558 - 11372501
Alignment:
Q  279 atgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccat 336  Q
    ||||||| | ||| || ||| |||||||||||||||||||||| ||||||||||||||    
T  11372558 atgcatcatgttggtacaggtagtaccaaacaattcttataagccttccttcaaccat 11372501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 33316809 - 33316760
Alignment:
Q  305 caaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||||| | ||||||||||||||| ||| |||||||||||    
T  33316809 caaacaattcttataatttttccttcaaccatgtagtctcatacctgcac 33316760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 2490140 - 2490064
Alignment:
Q  285 cttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    |||||||||||||| |||| |||||| ||||||||||  ||||||||| ||||  ||| ||||| |||||| |||||    
T  2490140 cttattgatataggtagtaacaaacacttcttataagcattccttcaatcatgcagtcacatacgtgcacaatctca 2490064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 6585705 - 6585657
Alignment:
Q  289 ttgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||| |||||||||||||| |||||||||||| ||||| ||||    
T  6585705 ttgatataggtagtaccaaacaatttttataagtcttctttcaatcatg 6585657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 16192472 - 16192368
Alignment:
Q  234 cacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaa 332  Q
    ||||||| |||||  |||||||||||||||  | ||  ||| ||||||||||||| ||||| |||| | |||||||||||||||||||  |||| |||||    
T  16192472 cacgcttcactgtatagttcttatggaatgggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaattcttataatccttcattcaa 16192373  T
Q  333 ccatg 337  Q
     ||||    
T  16192372 tcatg 16192368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 383
Target Start/End: Complemental strand, 1628828 - 1628719
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctt 370  Q
    ||||||||||||||||| ||||||| |  ||||||||||||   ||||||| ||| |||||||||||   ||||||| |||||| |  |||  ||||||     
T  1628828 aaaagaagatgcatcttgttgatatcgatagtaccaaacaa---ttataagcctttcttcaaccatgcaatcccatatctgcacggcttcaacatccctc 1628732  T
Q  371 tcatttcaatgtg 383  Q
    ||||| |||||||    
T  1628731 tcattccaatgtg 1628719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 7646710 - 7646676
Alignment:
Q  132 tgtaacatctcagacgacttttaggattgtcgact 166  Q
    ||||||||| |||||||||||||||||||||||||    
T  7646710 tgtaacatcccagacgacttttaggattgtcgact 7646676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 16811906 - 16811956
Alignment:
Q  300 agtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    ||||| ||||||||||||||||  ||||||||||||||| ||| |||||||    
T  16811906 agtacaaaacaattcttataagcattccttcaaccatgtagtctcatacct 16811956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 3305326 - 3305370
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatg 263  Q
    ||||||||| ||||||||||||||||||| |||| ||||| ||||    
T  3305326 ctactccaaatcaagcacgcttaactgtgaagtttttatgtaatg 3305370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 2907 - 2742
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||| ||||||||| |||||||||| |||||| ||||||||||||||    
T  2907 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataa 2808  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | |||||||||||||||| ||||||||||| ||| | ||||  |||||| ||||||| ||||||||    
T  2807 gccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgtgatt 2742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 1645721 - 1645894
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| | ||||||||||||||||    
T  1645721 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattctta 1645820  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||||||||||||||||||||| ||||||||||| ||| | ||||  || ||| ||||| | |||||||| ||||    
T  1645821 taagtcttccttcaaccatgtagtcccatacctacacggcctcaagattcctctcattccgatgtgattcggtt 1645894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 12691974 - 12692107
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  12691974 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 12692073  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  12692074 gccttccttcaaccatgcagtcccatacctgcac 12692107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 220 - 386
Target Start/End: Original strand, 50398511 - 50398678
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  50398511 tactccaagtcaagcacgcttaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttat 50398610  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||| |||||||||||||||| |||| |||||| ||| | ||||  |||||| ||||| | ||||||||    
T  50398611 aagccttccttcaaccatgtagtcctatacctacacggcctcaggatccctctcattccgatgtgatt 50398678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 201 - 391
Target Start/End: Original strand, 23942747 - 23942934
Alignment:
Q  201 catccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggc 299  Q
    |||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||| ||||||||||     
T  23942747 catccatccaaagacta----ctccaagtcaagcacgcttaactgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggt 23942842  T
Q  300 agtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||||||||||||||||||||||  ||||||||||||||| || |||||||| ||| | | ||  |||||| ||||| | |||||||| ||||    
T  23942843 agtaccaaacaattcttataagctttccttcaaccatgtagttccatacctacacggccccaggatccctctcattccgatgtgattcggtt 23942934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 222 - 351
Target Start/End: Original strand, 44471300 - 44471430
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||| |||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  44471300 ctccaaatcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 44471399  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    |||||||||||||||||| ||| ||||||||    
T  44471400 gtcttccttcaaccatgtagtctcatacctg 44471430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 222 - 387
Target Start/End: Complemental strand, 49998801 - 49998635
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| ||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  49998801 ctccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 49998702  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgattt 387  Q
    |||||||||||||||||  ||||||| ||| ||||| || |  |||||| ||||| | |||||||||    
T  49998701 gtcttccttcaaccatgcagtcccatgcctacacagccttaggatccctctcattccgatgtgattt 49998635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 220 - 386
Target Start/End: Original strand, 50398966 - 50399133
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  | || |||||||||||||||| | |||||||||| |||||||||||||||||||    
T  50398966 tactccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttat 50399065  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||| ||||||||||||||||  || ||||||| ||| ||||||  |||||| ||||| | ||||||||    
T  50399066 aagccttccttcaaccatgtaatctcatacctacacggtctcaggatccctctcattccgatgtgatt 50399133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 220 - 386
Target Start/End: Original strand, 51331254 - 51331421
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||| ||||| |||||||||  |||||||||||||||||||    
T  51331254 tactccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttat 51331353  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||| |||||||||||||||| ||||||||||| ||| | ||||| || ||| ||||| | ||||||||    
T  51331354 aagccttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgatt 51331421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 3169374 - 3169201
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||    ||  ||||||||||||||||| |||||||||| |||||||||||||| |||    
T  3169374 ctactccaagtcaagcacgcttaagtgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattttta 3169275  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||||||||||||||||||||| ||||||||||| ||| | ||||| || ||| ||||| | |||||||| ||||    
T  3169274 taagtcttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgattcggtt 3169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 222 - 375
Target Start/End: Original strand, 8467783 - 8467929
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||||||||||||||||||||||||||||||||        | | || |||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  8467783 ctccaagtcaagcacgcttaactgtggagttctg-------ggctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag 8467875  T
Q  322 tcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    ||||||||||||||||| ||| ||||||||||||||||||  ||||||||||||    
T  8467876 tcttccttcaaccatgtagtctcatacctgcacagtctcaggatccctttcatt 8467929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 23943214 - 23943334
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||| |||||||||| ||||||||| | || |||    
T  23943214 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaatatttttta 23943313  T
Q  318 taagtcttccttcaaccatgt 338  Q
    |||||||||||||||||||||    
T  23943314 taagtcttccttcaaccatgt 23943334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 7678597 - 7678726
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||| |||||||||||||||||||||||||   | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  7678597 ctccaagtcaagcacacttaactgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 7678696  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| | |||||||||    
T  7678697 gccttccttcaaccatgtagccccatacct 7678726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 29628640 - 29628812
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  | ||  || | ||||  |||||| |||||||||| ||||||||||||||||||    
T  29628640 ctactccaagtcaaacacgcttaactgtggagttcttatggaatgggctaccaaaca-aagacacatcttgttgatataggtagtaccaaacaattctta 29628738  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||||||||||||||||||||| ||| ||||||| ||| | ||||  |||||| ||||||| |||||||| ||||    
T  29628739 taagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcatttcgatgtgattcggtt 29628812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 35871792 - 35871628
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||| ||||||||| ||||||||||  |||||||||||||| |||||    
T  35871792 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaa-atgcatcttgttgatataggtggtaccaaacaattcatataa 35871694  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | |||||||||||||||  |||||||||||| || | ||||  |||||| ||||| | ||||||||    
T  35871693 gccttccttcaaccatgaagtcccatacctgtacggcctcaggatccctctcattccgatgtgatt 35871628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 228 - 375
Target Start/End: Original strand, 14571702 - 14571850
Alignment:
Q  228 gtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttc 326  Q
    ||||||||||||||||||||||||||||||||  | | | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  | |    
T  14571702 gtcaagcacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcc 14571801  T
Q  327 cttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    |||||||||||  ||||||||||| ||| | ||||  ||||||||||||    
T  14571802 cttcaaccatgaagtcccatacctacacggactcaagatccctttcatt 14571850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 241 - 391
Target Start/End: Original strand, 4127431 - 4127582
Alignment:
Q  241 aactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgtt 339  Q
    |||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||     
T  4127431 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgta 4127530  T
Q  340 gtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||||||||||| ||  | ||||  |||||| ||||| | |||||||| ||||    
T  4127531 gtcccatacctacatggcctcaggatccctctcattccgatgtgattcggtt 4127582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 351
Target Start/End: Original strand, 23350258 - 23350388
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||| || ||||||||||||| |  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  23350258 ctccaagtcaagcacgcttaactatgaagttcttatggaaggagctaccgaaaagaagatgcatcttgttgatataggaagtaccaaacaattcttataa 23350357  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    | |||||||||||||||  ||||| ||||||    
T  23350358 gccttccttcaaccatgcagtcccctacctg 23350388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 24628952 - 24629084
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  24628952 ctccaagtcaagcacgcttaactgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 24629051  T
Q  321 gtc---ttccttcaaccatgttgtcccatacct 350  Q
    | |   |||||| |||||||  |||||||||||    
T  24629052 gcctaattcctttaaccatgcagtcccatacct 24629084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 24629408 - 24629537
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||| ||||||||||| |  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  24629408 ctccaagtcaagcacgcttaactgtggaattcttatggaacgaggtaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 24629507  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |  |||||| |||||||  |||||||||||    
T  24629508 gcattcctttaaccatgcagtcccatacct 24629537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 21067899 - 21067766
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||  ||||   || || ||| ||||| |||||||||| || ||||||||||||||||    
T  21067899 ctacttcaagtcaagcacgcttaactgtgaagttcttatggaatg--gactaccaaaaaaatgtatcttgttgatataggtagcaccaaacaattcttat 21067802  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||||||||  |||||||||||||||    
T  21067801 aagtcttccttcaaccatgcagtcccatacctgcac 21067766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 44470850 - 44470964
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    ||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  44470850 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagttacgaacagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 44470949  T
Q  322 tcttccttcaaccat 336  Q
     |||| |||||||||    
T  44470950 ccttctttcaaccat 44470964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 219 - 347
Target Start/End: Original strand, 53996087 - 53996216
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    ||  ||||||||||| ||||| |||||||||| |||||||||||||| |||    
T  53996087 ctactccaagtcaagcacacttaactgtggagttcttatggaatgagataccaaaaagaagatgaatcttgttgatataggtagtaccaaacaattttta 53996186  T
Q  318 taagtcttccttcaaccatgttgtcccata 347  Q
    ||||  ||||||||||||||| ||||||||    
T  53996187 taagcattccttcaaccatgtagtcccata 53996216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 31817824 - 31817992
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||| |||||||||||||||||||| || |||||||||| ||||  | || |||||||||||||||||| ||| |||||| |||||| |||||||||||    
T  31817824 ctactacaagtcaagcacgcttaactatgaagttcttatgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattctta 31817923  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| |||||||||||||||  ||||||||| ||||    |||||||||||| | ||| | ||||||||    
T  31817924 taagccttccttcaaccatgcagtcccatacatgcatgacctcataatccctcttattccgatgtgatt 31817992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 172 - 375
Target Start/End: Complemental strand, 1464358 - 1464158
Alignment:
Q  172 cacgttttttgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactg 270  Q
    |||||||||||| ||||||||||||||| || |||||| || | |     |||||||| ||||||||| || |||| |||||||||| ||||  | || |    
T  1464358 cacgttttttggaaaacttctcagaaggtcacccatcccaaaattg----ctccaagttaagcacgctaaattgtgaagttcttatgaaatgagctaccg 1464263  T
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctt 370  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||| ||||  || ||||||| ||| ||| ||| ||||||     
T  1464262 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttctttcaactatgtattctcatacctacacggtcgcatgatccctc 1464163  T
Q  371 tcatt 375  Q
    |||||    
T  1464162 tcatt 1464158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 4127872 - 4127979
Alignment:
Q  230 caagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttcct 328  Q
    ||||||||||||||| || |||||||||||||| | | || |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  4127872 caagcacgcttaactctgaagttcttatggaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcct 4127971  T
Q  329 tcaaccat 336  Q
    ||||||||    
T  4127972 tcaaccat 4127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 222 - 320
Target Start/End: Original strand, 50814800 - 50814899
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  50814800 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 226 - 375
Target Start/End: Original strand, 15306070 - 15306226
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtaccaaa------caattcttat 318  Q
    ||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| || ||||||| |||||||||      ||| ||||||    
T  15306070 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaaattgctcaaatcttat 15306169  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    |||||||| ||| ||||||| ||||||||||| ||||| ||||  |||||| |||||    
T  15306170 aagtcttctttcgaccatgtagtcccatacctacacagcctcaggatccctctcatt 15306226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 230 - 353
Target Start/End: Complemental strand, 27029434 - 27029310
Alignment:
Q  230 caagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttcct 328  Q
    ||||||| ||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||    
T  27029434 caagcacacttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataagtcttcct 27029335  T
Q  329 tcaaccatgttgtcccatacctgca 353  Q
    |||| | ||| ||| ||| ||||||    
T  27029334 tcaatcgtgtagtctcattcctgca 27029310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 354
Target Start/End: Original strand, 9423830 - 9423966
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||| |||||||| ||||| |||| | |||||||||||||  | |||  |||||||||||||||| |||||||||| |||||||||||||| |||    
T  9423830 ctactccaattcaagcacacttaattgtgaaattcttatggaatgggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattatta 9423929  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||| |||| ||||||||||  ||||||||| |||||    
T  9423930 taagccttctttcaaccatgcagtcccatacatgcac 9423966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 185 - 337
Target Start/End: Original strand, 13613840 - 13613988
Alignment:
Q  185 aaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgca 283  Q
    ||||||||||||| | || |||||||||||||||    |||||||||| |||||||||||||||||||||||| |||||  | || | ||||||||||||    
T  13613840 aaacttctcagaacgtcacccatccaaagactag----tccaagtcaaacacgcttaactgtggagttcttatagaatgaactaccg-aaagaagatgca 13613934  T
Q  284 tcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||| ||||||||||  ||| ||||||||||||||||||  |||||| ||||||    
T  13613935 tcttgttgatataggtggtatcaaacaattcttataagtactccttctaccatg 13613988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 21220306 - 21220421
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| |||||||||||||| ||||||||| |||||    ||  ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  21220306 ctccaagtcaaacacgcttaactgtgtagttcttatagaatgagttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 21220405  T
Q  321 gtcttccttcaaccat 336  Q
    |  |||||||||||||    
T  21220406 gcattccttcaaccat 21220421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 14572176 - 14572254
Alignment:
Q  272 aaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  14572176 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacct 14572254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 225 - 354
Target Start/End: Complemental strand, 27026664 - 27026535
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    ||||||||||||||||||||  | |||||||||||||||  | ||  |||| |||||||||||| |||||||||| |||| ||||||||||||||||| |    
T  27026664 caagtcaagcacgcttaactacgtagttcttatggaatgggctaccaaaaa-aagatgcatcttgttgatataggtagtatcaaacaattcttataagcc 27026566  T
Q  324 ttccttcaaccatgttgtcccatacctgcac 354  Q
    ||||||||| | ||| |||||||||||||||    
T  27026565 ttccttcaatcgtgtagtcccatacctgcac 27026535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 27578884 - 27578998
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatgga-atgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||| ||||||||||||||||| |||||||||||| | | | |||||||||||||||  ||| ||||||||| | |||||||||||||||||||||    
T  27578884 ctccaagttaagcacgcttaactgtgtagttcttatggatagggctactgaaaagaagatgtgtctaattgatatatgtagtaccaaacaattcttataa 27578983  T
Q  321 gtcttccttcaacca 335  Q
    ||||||  |||||||    
T  27578984 gtcttcagtcaacca 27578998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 337
Target Start/End: Complemental strand, 14351977 - 14351844
Alignment:
Q  201 catccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggc 299  Q
    |||||||||||||||||    ||| ||||||| ||||||||||||||||||||||||||||| |   ||  ||||||||||||||||| |||||||||      
T  14351977 catccatccaaagacta----ctcgaagtcaaacacgcttaactgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatatagat 14351882  T
Q  300 agtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    ||||||||| || ||||| ||| |||||||||||||||    
T  14351881 agtaccaaaaaactcttacaagccttccttcaaccatg 14351844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 21067450 - 21067314
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| |||||||| ||| | |||||  | || | |||||||||||||||| |||||||| | ||||||||| |||| |||    
T  21067450 ctactccaagtcaagcacgcttaattgtggagtacttttagaatgagctaccggaaagaagatgcatcttgttgatatatgtagtaccaaataattatta 21067351  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | ||||||||||||||||||  ||| ||||| |||||    
T  21067350 ttagtcttccttcaaccatgcagtctcatacatgcac 21067314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 226 - 354
Target Start/End: Complemental strand, 13266247 - 13266118
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||||||| |||||| ||   ||  | || ||||| ||||||||||||||||||||||| ||||| ||| |||| ||||||| ||    
T  13266247 aagtcaagcacgcttaactgtggggttcttgtgatttgggctaccgaaaataagatgcatcttattgatatagggagtactaaaaaattattataagcct 13266148  T
Q  325 tccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||   ||||||||||||||    
T  13266147 tccttcaaccatgcattcccatacctgcac 13266118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 222 - 337
Target Start/End: Complemental strand, 17628676 - 17628560
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||| ||||||| ||||||||| |||||||||  ||  | |  |||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  17628676 ctccaagtcaggcacgctcaactgtggaattcttatgggttgggctatcgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataa 17628577  T
Q  321 gtcttccttcaaccatg 337  Q
    | || ||||||||||||    
T  17628576 gcctaccttcaaccatg 17628560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 267 - 387
Target Start/End: Complemental strand, 41870037 - 41869917
Alignment:
Q  267 actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatc 366  Q
    |||||||||||||||| |||| |||||||||| |||| || ||||||||||||||||||||||||| ||||  ||||||||  || |||||||||  |||    
T  41870037 actgaaaagaagatgcgtcttgttgatataggtagtatcatacaattcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcaggatc 41869938  T
Q  367 cctttcatttcaatgtgattt 387  Q
    ||| ||| | | |||||||||    
T  41869937 cctctcactccgatgtgattt 41869917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 225 - 386
Target Start/End: Original strand, 31817376 - 31817538
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    |||||||| ||||||||| ||| ||||||||| ||||||  |  | ||||||||||||||| || ||| |||||| |||||||||||||| ||||||       
T  31817376 caagtcaaacacgcttaattgtagagttcttaaggaatgggctgcggaaaagaagatgcattttgttggtataggtagtaccaaacaattattataaacg 31817475  T
Q  324 ttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||||||||||||||  ||| ||||| |||||   ||||| |||||| | ||||| ||||||||    
T  31817476 ttccttcaaccatgaagtctcatacatgcacgacctcatgatccctcttatttcgatgtgatt 31817538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 17029495 - 17029362
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||| |||||| |||||||||||||||||||||||||   | ||  |||  || ||||||||| |||||||||| ||||| |||||||| ||| ||    
T  17029495 ctccaagttaagcactcttaactgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatataggtagtactaaacaattattacaa 17029396  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||| |||||| |||  ||||||||| |||||    
T  17029395 gtcttcattcaactatgcagtcccatacttgcac 17029362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 33765024 - 33764908
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    ||||| |||||||||||||| |||| |||||||||  ||||  | ||  ||||||||||||||||| ||| |||||| || ||||||||||||||| |||    
T  33765024 tccaaatcaagcacgcttaagtgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaattcttaaaag 33764925  T
Q  322 tcttccttcaaccatgt 338  Q
    ||||| | |||||||||    
T  33764924 tcttcatccaaccatgt 33764908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 43928943 - 43929071
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtctt 325  Q
    |||||||||||| |||| |||||| |||||||| |||  | ||  ||||||||||||||||| ||| |||| | ||||||||||||||||| ||||  ||    
T  43928943 aagtcaagcacgtttaattgtggatttcttatgaaataactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagcttt 43929042  T
Q  326 ccttcaaccatgttgtcccatacctgcac 354  Q
    ||||| ||||  | ||| |||||||||||    
T  43929043 ccttcgaccaaatagtctcatacctgcac 43929071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 23976244 - 23976323
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    ||||||||||||||||| ||  |||||| ||||||||||||||||||||| ||||||||||| ||||  | |||||||||    
T  23976244 aaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataactcttccttcaatcatgcagacccatacct 23976323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 27578436 - 27578531
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||| ||||||||||||||  ||    || |||||||||||||||||| |||||||||| || |||||| |||||||||||    
T  27578436 aagtcaagcacgcttaactatggagttcttatggtttgggataccgaaaagaagatgcatcttgttgatataggtagcaccaaataattcttataa 27578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 391
Target Start/End: Original strand, 53854861 - 53854952
Alignment:
Q  300 agtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||| ||| |  |||| |||||| ||||| | |||||||| ||||    
T  53854861 agtaccaaacaattcttataagtcttccttcaaccatatagtctcatacctacactgcttcatgatccctctcattccgatgtgattcggtt 53854952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 20306139 - 20306241
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||||||||||||||||||||| ||| |||||||||| ||||  |  |   || |||||||||||| |||||||||  ||||||||||||||||||||||    
T  20306139 ctccaagtcaagcacgcttaaccgtgtagttcttatgaaatg--ggataccaaaaagatgcatcttgttgatatagatagtaccaaacaattcttataag 20306236  T
Q  322 tcttc 326  Q
     ||||    
T  20306237 ccttc 20306241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 42838733 - 42838648
Alignment:
Q  276 aagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    ||||||||| || |||||||||| |||||||||||||| ||||| ||||||||| ||| |||| ||| ||||| | ||||||||||    
T  42838733 aagatgcattttgttgatataggtagtaccaaacaatttttatacgtcttccttgaactatgtagtctcatacttacacagtctca 42838648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 4185880 - 4185748
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||  ||||||||| |||||||| | |||||  | ||  ||||||||||||||||| ||| |||| |  ||| |||||||||||||||     
T  4185880 ctccaagtcaagcatacttaactgtagagttcttgtagaatgagctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttatat 4185781  T
Q  321 gtcttccttcaaccatgttgtcccatacctgca 353  Q
    || |||||| |||||||  ||| ||||||||||    
T  4185780 gtattcctttaaccatgccgtctcatacctgca 4185748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 222 - 336
Target Start/End: Complemental strand, 17629132 - 17629018
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||| |||||| |||||| ||||| |||| ||  |  || ||||||||| ||||||||||  |||||| |||||||||||||||||||||    
T  17629132 ctccaagtcaagcatgcttaa-tgtggaattcttttggattgggcttctaaaaagaagaggcatcttattagtataggtagtaccaaacaattcttataa 17629034  T
Q  321 gtcttccttcaaccat 336  Q
    || ||  |||||||||    
T  17629033 gtttttattcaaccat 17629018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 14571663 - 14571700
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatgg 259  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14571663 ctccaagtcaagcacgcttaactgtggagttcttatgg 14571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 17029039 - 17028907
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||| ||||||| || ||||||||||||||   | |   |||| |||| ||||||| |||||||||| || ||| ||||||||||| ||    
T  17029039 ctccaagtcaagcactcttaactatgaagttcttatggaataagctaggtaaaataagacgcatcttgttgatataggtagcacctaacaattcttacaa 17028940  T
Q  321 gtcttccttcaaccatgttgtcccatacctgca 353  Q
     || ||||||||| |||  ||||||||| ||||    
T  17028939 atcctccttcaactatgcagtcccatacatgca 17028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 20309595 - 20309663
Alignment:
Q  323 cttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||||||||||||||| ||| |||||||||| |||||||| |||||| ||||| | |||||||| ||||    
T  20309595 cttccttcaaccatgtagtcacatacctgcaaagtctcatgatccctctcattccgatgtgattcggtt 20309663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 11828460 - 11828499
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaa 261  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  11828460 ctccaagtaaagcacgcttaactgtggagttcttatggaa 11828499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 9882722 - 9882619
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctt 370  Q
    |||||||||||||| |||||   ||||| |||||||||  |||||||||||| || |||||||||| ||||| ||| | ||||| ||||||| |||| |     
T  9882722 aaaagaagatgcattttattaggataggtagtaccaaa--attcttataagtttttcttcaaccatcttgtctcatgcttgcacggtctcatgatccgtc 9882625  T
Q  371 tcattt 376  Q
    ||||||    
T  9882624 tcattt 9882619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 26200311 - 26200396
Alignment:
Q  272 aaagaagatgcatcttattgatataggcagtaccaaacaattcttataag--tcttccttcaaccatgttgtcccatacctgcaca 355  Q
    |||||| ||||||||| ||  |||||  |||| ||||||||| |||||||  |||||||||||||||| |||||||||||| ||||    
T  26200311 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttccttcaaccatgatgtcccatacctacaca 26200396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 24271583 - 24271659
Alignment:
Q  279 atgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcaca 355  Q
    ||||||||| ||  |||||| |||| |||| |||||||||| ||||| ||| |||||||| ||| ||||||||||||    
T  24271583 atgcatcttgttcgtataggtagtatcaaataattcttatatgtcttactttaaccatgtagtctcatacctgcaca 24271659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 2499648 - 2499723
Alignment:
Q  300 agtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    |||||||||||||| |||||||| || |||||||||||  ||| ||||||||||| || | | ||||||| |||||    
T  2499648 agtaccaaacaatttttataagtgttgcttcaaccatgaagtctcatacctgcacggttttagaatccctctcatt 2499723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 257
Target Start/End: Original strand, 27578261 - 27578296
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttat 257  Q
    |||||||||||||||||||||||||| |||||||||    
T  27578261 ctccaagtcaagcacgcttaactgtgaagttcttat 27578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 39902477 - 39902518
Alignment:
Q  270 gaaaagaagatgcatcttattgatataggcagtaccaaacaa 311  Q
    |||||||||||||||||| |||||||||  ||||||||||||    
T  39902477 gaaaagaagatgcatcttgttgatatagatagtaccaaacaa 39902518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 45682318 - 45682242
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccata 347  Q
    ||||||| ||||||||| ||| |||||  | ||||||| |||||||||||  |||| ||||| ||||| ||||||||    
T  45682318 aaaagaaaatgcatcttgttggtatagataataccaaataattcttataaaccttcattcaatcatgtagtcccata 45682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 28561911 - 28561778
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  28561911 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 28561812  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  28561811 gccttccttcaaccatgcagtcccatacctgcac 28561778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 31284257 - 31284390
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  31284257 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 31284356  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  31284357 gccttccttcaaccatgcagtcccatacctgcac 31284390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 20885095 - 20885227
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||| |||| |||||||||||||    
T  20885095 ctactccaagtcaagcacgcttaattgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattctta 20885194  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    ||||||||||||||||||||| ||| |||||||    
T  20885195 taagtcttccttcaaccatgtagtcacatacct 20885227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 13150080 - 13150209
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| |||||| ||| |||||| ||||||||||||||    
T  13150080 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataa 13150179  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  13150180 gccttccttcaaccatgtagtcccatacct 13150209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 11180015 - 11180144
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  11180015 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 11180114  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  11180115 gccttccttcaaccatgtagtcccatacct 11180144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 226 - 386
Target Start/End: Original strand, 27187315 - 27187476
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||||||||||||||||| ||||  | || ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||    
T  27187315 aagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagcct 27187414  T
Q  325 tccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    || || |||||||  ||||||||| ||||||| ||||  |||||| ||||| ||||||||||    
T  27187415 tcatttaaccatgcagtcccatacatgcacagcctcaggatccctctcattccaatgtgatt 27187476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 32386715 - 32386848
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  32386715 ctccaagtcaagcacgcttaactgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataa 32386814  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | ||||||||||||||   |||||||||||||||    
T  32386815 gccttccttcaaccatacagtcccatacctgcac 32386848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 39641102 - 39640973
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| ||||||||||||||||||||||||||||||  | ||  |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  39641102 ctccaagtcaaacacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataa 39641003  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||||||||| ||| |||||||    
T  39641002 gtcttccttcaaccatgtagtctcatacct 39640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 13150535 - 13150652
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  13150535 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 13150634  T
Q  321 gtcttccttcaaccatgt 338  Q
    | ||||||||||||||||    
T  13150635 gccttccttcaaccatgt 13150652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 25230683 - 25230856
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||  | ||  ||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  25230683 ctactccaagtcaagcacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattctta 25230782  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||  |||||||||||||||| ||| ||||||| ||  | ||||  |||||| ||||| |||||||||||||||    
T  25230783 taaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggtt 25230856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 25238270 - 25238443
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||  | ||  ||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  25238270 ctactccaagtcaagcacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattctta 25238369  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||  |||||||||||||||| ||| ||||||| ||  | ||||  |||||| ||||| |||||||||||||||    
T  25238370 taaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggtt 25238443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 181 - 386
Target Start/End: Complemental strand, 30529888 - 30529687
Alignment:
Q  181 tgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaaga 279  Q
    ||||||||||| ||| ||| || ||||||||||||||    ||||||||||||||||||||||| || |||||||||||||||  | ||  |||||||||    
T  30529888 tgggaaacttc-cagtaggtcacccatccaaagacta----ctccaagtcaagcacgcttaactatgaagttcttatggaatgggctaccaaaaagaaga 30529794  T
Q  280 tgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaa 379  Q
    |||||||| |||||||||| ||||||||| |||||||||||| ||| |||||||||||| ||| ||||||| ||||| ||||  |||||| ||||| | |    
T  30529793 tgcatcttgttgatataggtagtaccaaaaaattcttataagccttacttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccga 30529694  T
Q  380 tgtgatt 386  Q
    |||||||    
T  30529693 tgtgatt 30529687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 32227665 - 32227536
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  32227665 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataa 32227566  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  32227565 gccttccttcaaccatgtagtcccatacct 32227536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 25238662 - 25238782
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||| ||  ||||||||||||||||||    
T  25238662 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattctta 25238761  T
Q  318 taagtcttccttcaaccatgt 338  Q
    |||||||||||||||||||||    
T  25238762 taagtcttccttcaaccatgt 25238782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 201 - 334
Target Start/End: Original strand, 4067324 - 4067454
Alignment:
Q  201 catccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggc 299  Q
    |||||||||||||||||    ||||||||||||||||||||||||||||||||||||| ||||  | ||  ||||||||||||||||| ||||||||||     
T  4067324 catccatccaaagacta----ctccaagtcaagcacgcttaactgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatataggt 4067419  T
Q  300 agtaccaaacaattcttataagtcttccttcaacc 334  Q
    |||||||||||||| ||||||||||||||||||||    
T  4067420 agtaccaaacaatttttataagtcttccttcaacc 4067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 14814114 - 14813985
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||||||||||||||| |  | || ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  14814114 ctccaagtcaagcacgcttaactgtggagttcttatggaacgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataa 14814015  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | ||||||| |||||||  ||| |||||||    
T  14814014 gccttcctttaaccatgcagtctcatacct 14813985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 16811546 - 16811381
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||| |||||||||||||  | || |||||||||||||||||| |||| ||||| |||||| ||||||||||||||    
T  16811546 ctccaagtcaagcacgcttaactgtggaattcttatggaatgagctaccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataa 16811447  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | |||||||||||||||  |||||| |||| ||| | ||||  |||||| ||||| | ||||||||    
T  16811446 gccttccttcaaccatggagtcccaaacctacacggcctcaggatccctctcattccgatgtgatt 16811381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 25230226 - 25230399
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||| |||||||||||||||||| |||||  | ||  ||||||||||| ||||| |||||||||| ||||||||| ||||||||    
T  25230226 ctactccaagtcaagcacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattctta 25230325  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||| |||||||||||||||| ||||||||||| |||   ||||  |||||| || || | |||||||||||||    
T  25230326 taagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgatttggtt 25230399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 25237813 - 25237986
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||| |||||||||||||||||| |||||  | ||  ||||||||||| ||||| |||||||||| ||||||||| ||||||||    
T  25237813 ctactccaagtcaagcacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattctta 25237912  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||| |||||||||||||||| ||||||||||| |||   ||||  |||||| || || | |||||||||||||    
T  25237913 taagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgatttggtt 25237986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 32227202 - 32227331
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | ||  ||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  32227202 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataa 32227301  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  32227302 gccttccttcaaccatgtagtcccatacct 32227331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 50347911 - 50347784
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  50347911 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 50347812  T
Q  321 gtcttccttcaaccatgttgtcccatac 348  Q
    | ||||||||||||| || ||| |||||    
T  50347811 gccttccttcaaccaagtagtctcatac 50347784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 39653329 - 39653196
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||| ||||||||||||||||| ||||||||  | || |||||||||||||||||| |||||||||| |||| | ||||||||||||||    
T  39653329 ctccaagtcaagcacacttaactgtggagttctcatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataa 39653230  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |  ||||||||||||||  |||||||||||||||    
T  39653229 gctttccttcaaccatgcagtcccatacctgcac 39653196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 386
Target Start/End: Complemental strand, 25248279 - 25248111
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||  | ||  ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  25248279 ctactccaagtcaagcacgctgaaccgtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattctta 25248180  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||   |||||| |||||||  ||||||||||||||| | || | ||||||| ||||| | ||||||||    
T  25248179 taaacattcctttaaccatgcagtcccatacctgcacggccttagaatccctctcattccgatgtgatt 25248111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 225 - 351
Target Start/End: Complemental strand, 41472462 - 41472336
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    ||||||||||||| ||||| ||||||||||||||||||| || || |||||||||||||||||| |||||||| | |||||||||||||||||||||| |    
T  41472462 caagtcaagcacgtttaaccgtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataag-c 41472364  T
Q  324 ttccttcaaccatgttgtcccatacctg 351  Q
    ||||||||||||||  ||| ||||||||    
T  41472363 ttccttcaaccatgcagtctcatacctg 41472336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 8067445 - 8067312
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | || ||||| |||||||||||| |||||||||| ||||| |||||||||||||||    
T  8067445 ctccaagtcaagcacgcttaactatggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataa 8067346  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |  ||||||||||||   ||||||||||||||    
T  8067345 gccggccttcaaccatgcaatcccatacctgcac 8067312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 386
Target Start/End: Original strand, 32796936 - 32797081
Alignment:
Q  242 actgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttg 340  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| |    
T  32796936 actgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttgcttcaaccatgtag 32797035  T
Q  341 tcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |  ||||||| ||  ||||||  |||||| | ||||| ||||||||    
T  32797036 tttcatacctacatggtctcaggatccctcttatttcgatgtgatt 32797081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 2911263 - 2911127
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||| ||||||||| |||||||||| | || ||||||||| |||    
T  2911263 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaattttta 2911164  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||   ||| ||||||||||| |||||||||||||||    
T  2911163 taaccattctttcaaccatgtggtcccatacctgcac 2911127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 221 - 354
Target Start/End: Complemental strand, 7494047 - 7493913
Alignment:
Q  221 actccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttata 319  Q
    ||||||||||||||| |||||| ||||||||||||||||  ||  | || |||||||||||||||||| |||||||| | ||||||||| ||||||||||    
T  7494047 actccaagtcaagcatgcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttata 7493948  T
Q  320 agtcttccttcaaccatgttgtcccatacctgcac 354  Q
    || |||||||||||||||  ||| |||||||||||    
T  7493947 agccttccttcaaccatgcagtctcatacctgcac 7493913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 234 - 350
Target Start/End: Original strand, 25239070 - 25239187
Alignment:
Q  234 cacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaa 332  Q
    ||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| ||||||||| ||||||||||||  |||||||||    
T  25239070 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttcaa 25239169  T
Q  333 ccatgttgtcccatacct 350  Q
    |||| | |||||||||||    
T  25239170 ccatatagtcccatacct 25239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 219 - 375
Target Start/End: Complemental strand, 37045203 - 37045046
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||| |   ||  ||||||||||||| ||| |||||||||| | ||||||||||||||||    
T  37045203 ctactccaagtcaagcacgcttaactgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatataggtattaccaaacaattctta 37045104  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    ||||  ||||||||  ||||| |||||| |||| ||| | ||||  |||||| |||||    
T  37045103 taagcattccttcattcatgtagtcccacacctacacggcctcaggatccctctcatt 37045046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 337
Target Start/End: Complemental strand, 29224489 - 29224373
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||| |||| |||||||||||  ||  | || |||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  29224489 ctccaagtcaagcacgcttaattgtgaagttcttatggtttgggctaccgaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataa 29224390  T
Q  321 gtcttccttcaaccatg 337  Q
    |||||||||||||||||    
T  29224389 gtcttccttcaaccatg 29224373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 223 - 329
Target Start/End: Complemental strand, 14820318 - 14820211
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    ||||||||||||||||||||||||||||||||||||||| |  | || ||||| |||||||||||| |||||||| | ||||||||||||||||||||||    
T  14820318 tccaagtcaagcacgcttaactgtggagttcttatggaacgagctaccgaaaataagatgcatcttgttgatataagtagtaccaaacaattcttataag 14820219  T
Q  322 tcttcctt 329  Q
     |||||||    
T  14820218 ccttcctt 14820211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 7477359 - 7477223
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||| |||||||||| |||||| ||||||||||||||||  ||  | || |||||||||||| ||||| |||||||| | ||||||||| ||||||||    
T  7477359 ctactctaagtcaagcatgcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgtatcttgttgatataagtagtaccaaaaaattctta 7477260  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||| |||||||||||||||  ||| |||||||||||    
T  7477259 taagccttccttcaaccatgcagtctcatacctgcac 7477223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 25802526 - 25802658
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||| |||||||||||||||| |||||||||||||  | |  |||||||||||||||||| |||||||||| |||||||||| |||||||    
T  25802526 ctactccaagtcaaacacgcttaactgtggatttcttatggaatgggctatcgaaaagaagatgcatcttgttgatataggtagtaccaaaccattctta 25802625  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    | || ||||| | |||||||  ||| |||||||    
T  25802626 tcagccttccgttaaccatgcagtctcatacct 25802658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 185 - 350
Target Start/End: Original strand, 25802952 - 25803114
Alignment:
Q  185 aaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgca 283  Q
    |||| ||||| |||| || |||||| ||||||||    ||||||||||||||||||||||  |||||||||||| ||||    || ||||||||||| ||    
T  25802952 aaacatctcataaggtcacccatcctaagactag----tccaagtcaagcacgcttaactacggagttcttatgaaatgggataccgaaaagaagataca 25803047  T
Q  284 tcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    |||| ||  |||||| |||||||||||||||||| ||||||| |||||||||||  |||||||||||    
T  25803048 tcttgtttttataggtagtaccaaacaattcttacaagtcttacttcaaccatgcagtcccatacct 25803114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 223 - 386
Target Start/End: Complemental strand, 41474161 - 41473997
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||||||||||||||||| ||||||||||| |||| ||||| || ||  ||||||| ||  ||||| |||||||||| |||| |||||||||||||||||    
T  41474161 tccaagtcaagcacgcttgactgtggagtttttatagaatgatccaccaaaaagaatatcaatcttgttgatataggaagtatcaaacaattcttataag 41474062  T
Q  322 tcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||||||| ||||||   ||| |||||||| ||   ||||  |||||| ||||||| ||||||||    
T  41474061 tcttcctttaaccatccagtcacatacctgaacgacctcaagatccctctcatttcgatgtgatt 41473997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 225 - 386
Target Start/End: Complemental strand, 16811087 - 16810925
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    |||||||||||| ||||| |||| |||||||||||||||  | || |||||||||||||||||| | |||||||  |||||  ||||||||||||||| |    
T  16811087 caagtcaagcacacttaaatgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagcc 16810988  T
Q  324 ttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| |||||||||  |||||||| || ||| | ||||  |||||| ||||| | ||||||||    
T  16810987 ttccatcaaccatgcagtcccatatctacacggcctcaagatccctctcattccgatgtgatt 16810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 31103991 - 31104102
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctt 370  Q
    ||||||| ||||||||  ||| |||||  |||| ||||||||||||||||||||||||| |||||||   || |||||||| |||  || |  ||||||     
T  31103991 aaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataagtcttccttgaaccatgcaatctcatacctgtacaaccttaagatcccta 31104090  T
Q  371 tcatttcaatgt 382  Q
    ||||||||||||    
T  31104091 tcatttcaatgt 31104102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 26310021 - 26310086
Alignment:
Q  272 aaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||||||||| ||| |||| | |||| |||| ||||||||||| || |||||||||||||    
T  26310021 aaagaagatgcatctttttggtatatgtagtaacaaaaaattcttataaatcgtccttcaaccatg 26310086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 3890095 - 3890046
Alignment:
Q  269 tgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    |||||| |||||||||||| |||||||| | |||| ||||||||||||||    
T  3890095 tgaaaaaaagatgcatcttgttgatatatgtagtagcaaacaattcttat 3890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 318
Target Start/End: Complemental strand, 3899965 - 3899868
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcgact-gaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    |||||||||||||| |||| | |||||||||||||||   |||    | ||||| |||||||||||| ||| |||| | |||||||||||||||||||    
T  3899965 ctccaagtcaagcatgctttattgtggagttcttatgatttgtgttgtcgaaaaaaagatgcatcttgttggtatatgtagtaccaaacaattcttat 3899868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 15381294 - 15381258
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatgg 259  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  15381294 tccaagtcaagcacacttaaatgtggagttcttatgg 15381258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 15396529 - 15396493
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatgg 259  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  15396529 tccaagtcaagcacacttaaatgtggagttcttatgg 15396493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 15410665 - 15410629
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatgg 259  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  15410665 tccaagtcaagcacacttaaatgtggagttcttatgg 15410629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 47518384 - 47518416
Alignment:
Q  305 caaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||||||||||| ||||||||||||||    
T  47518384 caaacaattcttataagttttccttcaaccatg 47518416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 6e-45; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 222 - 361
Target Start/End: Original strand, 22548976 - 22549116
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||| ||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  22548976 ctccaagtcaagcacgcttaactgtggagtttttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22549075  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    |||||||||||||||||  ||| ||||||||||||| ||||    
T  22549076 gtcttccttcaaccatgcagtcacatacctgcacagcctca 22549116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 22026544 - 22026411
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  22026544 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22026445  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||| ||||||||||  |||||||||||||||    
T  22026444 gccttcattcaaccatgcagtcccatacctgcac 22026411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 6464888 - 6465056
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  | ||  ||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  6464888 ctactccaagtcaagcacgcttaactgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattctta 6464987  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| |||||||||||||||| || |||||||| ||| | ||||| || ||| ||||| ||||||||||    
T  6464988 taagccttccttcaaccatgtagttccatacctacacggcctcatgattcctctcattccaatgtgatt 6465056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 351
Target Start/End: Complemental strand, 17103246 - 17103116
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||| |||||||||||||||||||  | || |||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  17103246 ctccaagtcaagcacgcttaaccgtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataa 17103147  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    |||||||||||||||||  ||| ||||||||    
T  17103146 gtcttccttcaaccatgcagtctcatacctg 17103116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 12827235 - 12827364
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  12827235 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 12827334  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | ||||||||||||| || |||||||||||    
T  12827335 gccttccttcaaccaagtagtcccatacct 12827364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 27926064 - 27925931
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  27926064 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 27925965  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
      |||||||||||||||  |||||||||||||||    
T  27925964 tccttccttcaaccatgcagtcccatacctgcac 27925931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 41659086 - 41659219
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| ||||||||||||||||||||||||| ||||  | |  |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  41659086 ctccaagtcaaacacgcttaactgtggagttcttatgtaatgagctatcgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 41659185  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||||||  |||||||||||||||    
T  41659186 gtcttccttcaaccatgcagtcccatacctgcac 41659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 219 - 386
Target Start/End: Complemental strand, 2044226 - 2044058
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  | ||  ||||||| ||||||||| |||||||||| |||| |||||||||||||    
T  2044226 ctactccaagtcaagcacgcttaactgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattctta 2044127  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| |||||||||||||||| ||| ||||||| ||||| ||||  |||||| ||||| | ||||||||    
T  2044126 taagccttccttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgatt 2044058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 10845043 - 10844915
Alignment:
Q  227 agtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtctt 325  Q
    |||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||    
T  10845043 agtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcttt 10844944  T
Q  326 ccttcaaccatgttgtcccatacctgcac 354  Q
    ||||||||||||  |||||||||||||||    
T  10844943 ccttcaaccatgcagtcccatacctgcac 10844915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 222 - 361
Target Start/End: Original strand, 22548530 - 22548670
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||| ||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  22548530 ctccaagtcaagcacgcttaactgtggagttattatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 22548629  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
      |||||||||||||||  ||| ||||||||||||| ||||    
T  22548630 aacttccttcaaccatgcagtcacatacctgcacagcctca 22548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 225 - 353
Target Start/End: Original strand, 10844599 - 10844728
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    |||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| || ||||||| |||||||||||| ||||||||| |    
T  10844599 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagcc 10844698  T
Q  324 ttccttcaaccatgttgtcccatacctgca 353  Q
    ||||||||||||||  ||||||||||||||    
T  10844699 ttccttcaaccatgcagtcccatacctgca 10844728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 222 - 359
Target Start/End: Complemental strand, 25147701 - 25147563
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||| |||||| ||||||||||||||||||  | || |||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  25147701 ctccaagtcaagcacgattaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataa 25147602  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtct 359  Q
    | |||||||||||||||  ||| ||||||| ||||||||    
T  25147601 gccttccttcaaccatgcagtctcatacctacacagtct 25147563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 25144937 - 25144804
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  25144937 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataa 25144838  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | || ||||||| ||||   ||||||||||||||    
T  25144837 gcctgccttcaatcatgcaatcccatacctgcac 25144804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 27022319 - 27022448
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  |  | ||||| ||||||||| || |||||||||| |||||||||||||||||||||    
T  27022319 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataa 27022418  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||| ||||||||||| |||||||||||    
T  27022419 gccttctttcaaccatgtagtcccatacct 27022448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 8080320 - 8080452
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  | ||  ||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  8080320 ctactccaagtcaagcacgcttaactgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattctta 8080419  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    | ||  ||||||||||||||| |||||||||||    
T  8080420 tcagctttccttcaaccatgtagtcccatacct 8080452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 386
Target Start/End: Original strand, 34308460 - 34308625
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||| ||||||||||||| ||||||||||||||||||| | | || |||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  34308460 ctccaagccaagcacgcttaagtgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataa 34308559  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | ||||||||||||||   ||| ||||| || || | ||||  |||||||||||| | ||||||||    
T  34308560 gccttccttcaaccatacagtctcatacttgtacggcctcaggatccctttcattccgatgtgatt 34308625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 32292565 - 32292429
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |   ||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  32292565 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatatagatagtaccaaacaattctta 32292466  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    ||||  ||||||||||||||  ||||||||| |||||    
T  32292465 taagcattccttcaaccatgcagtcccatacttgcac 32292429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 222 - 351
Target Start/End: Complemental strand, 12100856 - 12100726
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||| |||||||||| ||||  | || ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  12100856 ctccaagtcaagcacgcttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataa 12100757  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    |  | ||||||||||||  ||| ||||||||    
T  12100756 gcttgccttcaaccatgcagtctcatacctg 12100726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 219 - 360
Target Start/End: Original strand, 33852236 - 33852378
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| |||| |||||||||||||||  | ||  |||||||||| |||||| || ||||||| ||||||||||||||||||    
T  33852236 ctactccaagtcaagcacgcttaattgtgaagttcttatggaatgggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattctta 33852335  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctc 360  Q
    ||||| |||||||||||||   ||| ||||||||||| |||||    
T  33852336 taagttttccttcaaccatacagtctcatacctgcacggtctc 33852378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 28453538 - 28453370
Alignment:
Q  183 ggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatg 281  Q
    |||||||||  || ||| |||||||||||||||||    ||||||||||||||||||||||||| ||||||||||||||| | | ||   ||||||||||    
T  28453538 ggaaacttccgagtaggtcatccatccaaagacta----ctccaagtcaagcacgcttaactgtagagttcttatggaatgggctaccataaagaagatg 28453443  T
Q  282 catcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||| || ||||||| ||||  ||||||||||||||||| ||| ||||||||||  ||| |||||||||||    
T  28453442 catcttgttaatataggtagtataaaacaattcttataagttttctttcaaccatgaagtctcatacctgcac 28453370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 219 - 353
Target Start/End: Complemental strand, 41913138 - 41913003
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||  | ||  ||||||||| ||||||| |||||||||| || |||||||||||||||    
T  41913138 ctacttcaagtcaagcacgcttaactgcggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattctta 41913039  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgca 353  Q
    |||| |||| ||||| ||||  ||||||||||||||    
T  41913038 taagccttctttcaaacatgcagtcccatacctgca 41913003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 172 - 337
Target Start/End: Original strand, 27819181 - 27819343
Alignment:
Q  172 cacgttttttgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactg 270  Q
    |||| ||| ||| |||||| |||||||| || ||||||||| ||||    ||| ||||||| ||| ||||||||||||||| ||||||||||  | | ||    
T  27819181 cacgctttctggaaaacttatcagaaggtcacccatccaaatacta----ctcaaagtcaaacacacttaactgtggagtttttatggaatgagctattg 27819276  T
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||| || |||||||||||||||    
T  27819277 aaaagaagatgcattttgttgatataggtagtaccaaacaattcttattagccttccttcaaccatg 27819343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 226 - 333
Target Start/End: Complemental strand, 25148128 - 25148020
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||||||||||||||||||||||  | || |||||||| ||||||||| |||||||||| |  ||||||||||||||||||| ||    
T  25148128 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagcct 25148029  T
Q  325 tccttcaac 333  Q
    |||||||||    
T  25148028 tccttcaac 25148020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 21316088 - 21316190
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||  | |||||||||| |||||||||| |||||||||| ||||||||||||||||| |    
T  21316088 tactccaagtcaagcacacttaactgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatataggtagtaccaaacaattctttt 21316187  T
Q  319 aag 321  Q
    |||    
T  21316188 aag 21316190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 34308916 - 34309035
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattg----atataggcagtaccaaacaattctt 316  Q
    ||||||| ||||||||||||||||||||||||||||||||| | | || |||||||||||||||||| |||    ||||||| ||||||||||| |||||    
T  34308916 ctccaagccaagcacgcttaactgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatatatataggtagtaccaaacagttctt 34309015  T
Q  317 ataagtcttccttcaaccat 336  Q
    ||||| ||||||||||||||    
T  34309016 ataagccttccttcaaccat 34309035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 177 - 342
Target Start/End: Original strand, 15818956 - 15819117
Alignment:
Q  177 tttttgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaag 275  Q
    |||| |||||||||| ||||||| |  |||||||||| |||    ||||||||||||||   ||||||||| |||||||||||||||| | || ||||||    
T  15818956 ttttcgggaaacttcccagaaggtcgcccatccaaagccta----ctccaagtcaagcaaatttaactgtg-agttcttatggaatgtgctaccgaaaag 15819050  T
Q  276 aagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtc 342  Q
    |||||||||| | |||||||| | |||||||||||||| || ||||  |||||||||||||||||||    
T  15819051 aagatgcatcatgttgatatatgtagtaccaaacaatttttctaagcattccttcaaccatgttgtc 15819117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 229 - 375
Target Start/End: Original strand, 28375042 - 28375189
Alignment:
Q  229 tcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttcc 327  Q
    |||||||||||||||| || || | |||||||| |  | || |||||||||||||||||| ||||| |||| |||||||||||||||||||||| |||||    
T  28375042 tcaagcacgcttaactatgaagctgttatggaaagagctaccgaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagccttcc 28375141  T
Q  328 ttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    ||||| ||||  ||| ||||||||||| | ||||  |||||| |||||    
T  28375142 ttcaatcatgcagtctcatacctgcacggcctcaggatccctctcatt 28375189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 226 - 343
Target Start/End: Complemental strand, 3745262 - 3745144
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||| ||||||||||| ||||||||||  | ||  |||||||||||||| || ||| |||||| ||||| ||||| ||||||||||| |    
T  3745262 aagtcaagcacgcttgactgtggagttattatggaatgggctaccaaaaagaagatgcatattgttggtataggtagtactaaacagttcttataagttt 3745163  T
Q  325 tccttcaaccatgttgtcc 343  Q
    |||||||||||||| ||||    
T  3745162 tccttcaaccatgtagtcc 3745144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 22840530 - 22840639
Alignment:
Q  242 actgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttg 340  Q
    ||||||||||||||||||||||  | |   ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| ||| ||||||| |    
T  22840530 actgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtag 22840629  T
Q  341 tcccatacct 350  Q
    || |||||||    
T  22840630 tctcatacct 22840639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 27021909 - 27021976
Alignment:
Q  270 gaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||    
T  27021909 gaaaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatg 27021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 222 - 375
Target Start/End: Complemental strand, 6466871 - 6466722
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||||||||||| || ||||| | || |||||||||| |||| | | ||||||  ||||||||||| ||| |||||| |||||||||||||| |||||||    
T  6466871 ctccaagtcaagtacacttaaatttgtagttcttatgaaatggcta-tgaaaa--agatgcatcttgttggtataggtagtaccaaacaatttttataag 6466775  T
Q  322 tcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    || ||||| |||||||  || ||||||| ||||||||||| ||||||| |||||    
T  6466774 tc-tcctttaaccatgcagttccatacccgcacagtctcagaatccctctcatt 6466722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 30334938 - 30335029
Alignment:
Q  270 gaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    |||||||||||| ||||| ||| |||||| |||| ||||||||| |||||||||||| ||||||| ||  ||| ||||||||||||||||||    
T  30334938 gaaaagaagatgtatcttgttggtataggtagtatcaaacaatttttataagtcttctttcaaccttgcagtcgcatacctgcacagtctca 30335029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 31283636 - 31283719
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaa 308  Q
    ||||||||||| ||||||||||||||||||||||||| | | || |||||||||||||||||| || ||||||| |||||||||    
T  31283636 aagtcaagcacacttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaa 31283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 393
Target Start/End: Complemental strand, 1297174 - 1297000
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    |||| |||||||| ||| ||||||| ||||||||||||  ||||    || |||||||| ||  ||||| ||| |||||| |||||||||||||||||||    
T  1297174 tacttcaagtcaaacacacttaactatggagttcttatataatgggataccgaaaagaatataaatcttgttggtataggtagtaccaaacaattcttat 1297075  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggttgc 393  Q
    |||| || |||||||||||  ||| ||||||||||   ||||| || |||| ||| ||  |||||||||||||||    
T  1297074 aagttttacttcaaccatgcagtctcatacctgcatgatctcagaacccctctcactttgatgtgatttggttgc 1297000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 350
Target Start/End: Complemental strand, 3744788 - 3744674
Alignment:
Q  237 gcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaacca 335  Q
    |||||| ||| ||||||||||| ||||| | ||  |||||||| ||||| || ||| |||||| |||  |||||||||||||||||||||||||||||||    
T  3744788 gcttaattgtagagttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataagtcttccttcaacca 3744689  T
Q  336 tgttgtcccatacct 350  Q
    ||  |||||||||||    
T  3744688 tgcagtcccatacct 3744674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 219 - 342
Target Start/End: Original strand, 15567534 - 15567658
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||| |||| ||||||| |||||||||||| ||||  | ||  ||||||||||| ||||| ||| |||| | |||  |||||||||||||    
T  15567534 ctactccaagtcaaacacgattaactgcggagttcttatgaaatgaactaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaattctta 15567633  T
Q  318 taagtcttccttcaaccatgttgtc 342  Q
    |||| |||||||| |||||| ||||    
T  15567634 taagccttccttccaccatgatgtc 15567658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 276 - 350
Target Start/End: Complemental strand, 22705282 - 22705208
Alignment:
Q  276 aagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||| |||||||||| |||||||||||||||||||||  |||||||||| |||   |||||||||||    
T  22705282 aagatgcatcttgttgatataggtagtaccaaacaattcttataacccttccttcaatcatccagtcccatacct 22705208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 30527461 - 30527566
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||| ||||||| ||  ||||||||||||||||||||| ||||  | ||  ||||||||||| ||||||||||| || |  ||||||||||||||||||    
T  30527461 tactcaaagtcaaacaatcttaactgtggagttcttatgaaatgggctacccaaaagaagatgtatcttattgatgtaagtggtaccaaacaattcttat 30527560  T
Q  319 aagtct 324  Q
    ||||||    
T  30527561 aagtct 30527566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 15568036 - 15568100
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaacca 335  Q
    |||| |||||||||||| ||||||||||   |||||||||||| |||||||||||||||||||||    
T  15568036 aaaaaaagatgcatcttgttgatataggtcataccaaacaattgttataagtcttccttcaacca 15568100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 29971450 - 29971511
Alignment:
Q  289 ttgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||  |||| |||||||||||||||| ||||||||||||||||| ||| |||||||    
T  29971450 ttgatatagatagtatcaaacaattcttataaatcttccttcaaccatgtagtctcatacct 29971511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 17103377 - 17103335
Alignment:
Q  132 tgtaacatctcagacgacttttaggattgtcgactgactccac 174  Q
    ||||||||| |||||||||||||||||||||||||||| ||||    
T  17103377 tgtaacatcccagacgacttttaggattgtcgactgaccccac 17103335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 17429611 - 17429553
Alignment:
Q  275 gaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaac 333  Q
    |||||| |||||| |||||||||| ||||||||| ||| || |||||||||||||||||    
T  17429611 gaagatacatcttgttgatataggtagtaccaaataatactcataagtcttccttcaac 17429553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 10844466 - 10844503
Alignment:
Q  132 tgtaacatctcagacgacttttaggattgtcgactgac 169  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  10844466 tgtaacatcccagacgacttttaggattgtcgactgac 10844503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 36968434 - 36968491
Alignment:
Q  279 atgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccat 336  Q
    ||||||||| |||||||| | || ||||| ||||||||||||||| ||||||||||||    
T  36968434 atgcatcttgttgatataagtagcaccaatcaattcttataagtcatccttcaaccat 36968491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 10729791 - 10729747
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatg 263  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||    
T  10729791 ctactccaagtctatcacgcttaattgtggagttcttatggaatg 10729747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 375
Target Start/End: Complemental strand, 6466418 - 6466268
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    |||||||||||| | ||||  |||| |||||||| |||| | ||  ||| ||||||||| ||| ||| |||| | ||||||||||||||| ||| ||| |    
T  6466418 caagtcaagcacacctaacaatggatttcttatgaaatgactaccaaaaggaagatgcaacttgttggtataagtagtaccaaacaattcatattagtat 6466319  T
Q  325 tccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
     | || || ||||| ||||||||| |||||  ||||| ||| ||| |||||    
T  6466318 acttttaaacatgtagtcccatacatgcactctctcagaattcctctcatt 6466268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 25307932 - 25307895
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttctta 256  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  25307932 ctacaccaagtcaagcaagcttaactgtggagttctta 25307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 6e-45; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 219 - 386
Target Start/End: Complemental strand, 39147107 - 39146939
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| || ||||| | |||| |||||||||||||    
T  39147107 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattctta 39147008  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||||||| ||||||||||||| ||||||||||| ||| | ||||| |||||| ||||||| ||||||||    
T  39147007 taagtctaccttcaaccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgtgatt 39146939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 222 - 375
Target Start/End: Complemental strand, 2193981 - 2193827
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  2193981 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 2193882  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    | |||||||||||||||| ||||||||||| ||  | ||||| |||||| |||||    
T  2193881 gccttccttcaaccatgtagtcccatacctacaaggcctcatgatccctctcatt 2193827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 17445436 - 17445606
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||| |||||||||||||  | || || ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  17445436 ctccaagtcaagcacgcttaactgtggatttcttatggaatgagctaccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 17445535  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    | |||||||||||||||| ||||||| ||| ||| | ||||  |||||| ||||||| |||||||| ||||    
T  17445536 gccttccttcaaccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatgtgattcggtt 17445606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 8642015 - 8642148
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  8642015 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataa 8642114  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  8642115 gccttccttcaaccatgcagtcccatacctgcac 8642148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 10927381 - 10927554
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  10927381 ctactccaagtcaagcacgtttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattctta 10927480  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||| |||||||||||||||| ||| ||||||| ||| | ||||  |||||| ||||| | |||||||| ||||    
T  10927481 taagccttccttcaaccatgtagtctcatacctacacggcctcaagatccctctcattccgatgtgattcggtt 10927554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 222 - 337
Target Start/End: Complemental strand, 2474124 - 2474008
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2474124 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataa 2474025  T
Q  321 gtcttccttcaaccatg 337  Q
    | |||||||||||||||    
T  2474024 gccttccttcaaccatg 2474008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 2474570 - 2474444
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  2474570 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaa 2474471  T
Q  321 gtcttccttcaaccatgttgtcccata 347  Q
    |||||||||||||||||  ||||||||    
T  2474470 gtcttccttcaaccatgcagtcccata 2474444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 1822074 - 1821938
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  1822074 ctactccaagtcaagcacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattctta 1821975  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||| |||||||||||||||  ||| |||||||||||    
T  1821974 taagccttccttcaaccatgcagtctcatacctgcac 1821938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 10926924 - 10927056
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | ||  ||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  10926924 ctactccaagtcaagcacgtttaactgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattctta 10927023  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    |||| |||||||||||||||| |||||||||||    
T  10927024 taagccttccttcaaccatgtagtcccatacct 10927056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 222 - 345
Target Start/End: Original strand, 42788627 - 42788751
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||||||||| |||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  42788627 ctccaagtcaagcacgcttaactgtggagttcttgtggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 42788726  T
Q  321 gtcttccttcaaccatgttgtccca 345  Q
    |||||| ||||||||||| ||||||    
T  42788727 gtcttctttcaaccatgtagtccca 42788751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 21886127 - 21886261
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||| ||||||| ||||||||||||||||||  | || |||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  21886127 ctccaagtcaagcacacttaactttggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataa 21886226  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcaca 355  Q
    | |||||||||||||||  ||||||||||||||||    
T  21886227 gccttccttcaaccatgcagtcccatacctgcaca 21886261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 189233 - 189068
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||| |||||||||||||||||||||||||||  | || ||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  189233 ctccaagtcaagcatgcttaactgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataa 189134  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | |||||||||||||||  ||||||||| || || | ||||  |||||| ||||| | ||||||||    
T  189133 gccttccttcaaccatgcagtcccatacatgtacggcctcaggatccctctcattccgatgtgatt 189068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 34372233 - 34372106
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||| |||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  34372233 ctccaagtcaagcacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaa 34372134  T
Q  321 gtcttccttcaaccatgttgtcccatac 348  Q
    |  ||||||||||||||| |||||||||    
T  34372133 gcattccttcaaccatgtagtcccatac 34372106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 222 - 351
Target Start/End: Original strand, 3887038 - 3887168
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||| |||||||||| ||||||||| ||||| |||||    
T  3887038 ctccaagtcaagcacgcttaactgtgaagttcttatggaatgagttaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcatataa 3887137  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    |||||||||||||||||  ||||||||||||    
T  3887138 gtcttccttcaaccatgcagtcccatacctg 3887168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 8391303 - 8391472
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||| |||||||||||||||||   | || |||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  8391303 ctccaagtcaagcacgcttaactatggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatacagg-agtaccaaacaattcttataa 8391401  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||||||||||| ||||| ||| ||| ||| ||| | |||| ||||||| ||||| | |||||||| ||||    
T  8391402 gtcttccttcaatcatgtagtctcatgcctacacggcctcagaatccctctcattccgatgtgattcggtt 8391472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 172 - 350
Target Start/End: Original strand, 27646770 - 27646945
Alignment:
Q  172 cacgttttttgggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactg 270  Q
    ||||||| |||||||||||| | | ||| || |||| |||||||||    ||||||| ||||||||||||||||||||||||||||| ||||  | ||      
T  27646770 cacgtttattgggaaacttcccggtaggtcacccatgcaaagacta----ctccaagacaagcacgcttaactgtggagttcttatgaaatgggctacca 27646865  T
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  27646866 aaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagccttccttcaaccatgtagccccatacct 27646945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 226 - 354
Target Start/End: Complemental strand, 34867951 - 34867822
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    |||| |||||||||||||| ||||||||||||| ||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  34867951 aagttaagcacgcttaactatggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcct 34867852  T
Q  325 tccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||  |||||||||||||||    
T  34867851 tccttcaaccatgcagtcccatacctgcac 34867822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 351
Target Start/End: Complemental strand, 34371777 - 34371647
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||| ||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  34371777 ctccaagtcaagcacgcttaactgtggtgttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaa 34371678  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    |  ||||||||||||||  |||||| |||||    
T  34371677 gcattccttcaaccatgcagtcccacacctg 34371647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 391
Target Start/End: Original strand, 20039453 - 20039625
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||  | ||  ||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  20039453 ctactctaagtcaagcacacttaactgtagagttcttatggaatgggctacc-aaaagaaaatgcatcttgttgatataggtagtaccaaacaattctta 20039551  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||| ||||||||||| |||| |||| |||||| ||| | ||||| |||||| ||||| | |||||||| ||||    
T  20039552 taagccttccttcaactatgtagtcctatacctacacggcctcatgatccctctcattccgatgtgattcggtt 20039625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 22556701 - 22556568
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||  |||||||||||||| ||||||||  |||||  | || |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  22556701 ctccaagtcagccacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataa 22556602  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  22556601 gccttccttcaaccatgcagtcccatacctgcac 22556568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 22557134 - 22557001
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||| ||||||||||||||| ||||||||  |||||  | || |||||||||||||||||| ||||||| || ||||||||||||||| |||||    
T  22557134 ctccaagtcaggcacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatattggtagtaccaaacaattcatataa 22557035  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  22557034 gccttccttcaaccatgcagtcccatacctgcac 22557001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 222 - 348
Target Start/End: Original strand, 3886582 - 3886709
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  3886582 ctccacgtcaaacacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataa 3886681  T
Q  321 gtcttccttcaaccatgttgtcccatac 348  Q
    |  ||||||| ||||||  |||||||||    
T  3886682 gcattccttctaccatgcagtcccatac 3886709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 225 - 391
Target Start/End: Original strand, 15512996 - 15513164
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag-- 321  Q
    ||||||||||||| |||| ||||||||||||||||||||    ||  ||||||||||||||||| ||||||| || |||||||| |||||||||||||      
T  15512996 caagtcaagcacgtttaattgtggagttcttatggaatgagataccaaaaagaagatgcatcttgttgatattggtagtaccaa-caattcttataagca 15513094  T
Q  322 tcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    | ||||||||||||||| ||||||||||| ||||| || || |||||| ||||| | |||||||| ||||    
T  15513095 tattccttcaaccatgtagtcccatacctacacagcctaatgatccctctcattccgatgtgattcggtt 15513164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 182 - 350
Target Start/End: Original strand, 29680052 - 29680210
Alignment:
Q  182 gggaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagat 280  Q
    |||||||||||| ||||| || ||||||||||||||    ||||||||||| ||||||||||||||||||||||||| ||||  | ||  ||||||||||    
T  29680052 gggaaacttctcggaaggtcacccatccaaagacta----ctccaagtcaaacacgcttaactgtggagttcttatgtaatgggctaccaaaaagaagat 29680147  T
Q  281 gcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    ||||||| |||||||||| | |||||       |||||||| |||||||||||||||| |||||||||||    
T  29680148 gcatcttgttgatataggtattacca-------cttataagccttccttcaaccatgtagtcccatacct 29680210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 30719786 - 30719920
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||  ||||||||||| ||||||||||||||||  || |  || |||||||||||||||||| ||  |||||| ||||||||||||||| |||||    
T  30719786 ctccaagttgagcacgcttaattgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataa 30719885  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcaca 355  Q
    | ||||||||||| ||| |||||||||| ||||||    
T  30719886 gccttccttcaacaatgatgtcccatacttgcaca 30719920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 30684537 - 30684707
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||  ||||||||||||||||||||||||||||  || |  || |||||||||||||||||| ||  |||||  ||||||||||||||| |||||    
T  30684537 ctccaagttgagcacgcttaactgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaattcatataa 30684636  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    | || |||||||| ||| ||| |||||| ||||||  ||||  |||||  ||||| | |||||||||||||    
T  30684637 gcctcccttcaacaatgatgttccatacttgcacaacctcaggatccccctcattccgatgtgatttggtt 30684707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 18304596 - 18304467
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||| || ||||||||||||| |||||||||||||  | || |||||||| ||||||||| |||||||||| ||||||||||||||  |||||    
T  18304596 ctccaagtcaaacatgcttaactgtggaattcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataa 18304497  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |  || | ||| |||||| |||||||||||    
T  18304496 gcttttcatcatccatgtagtcccatacct 18304467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 18750177 - 18750310
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||| ||| |||| | |||||||||||||||||   | || |||||||||||||||||| ||| |||||| |||||||||||||| ||||||    
T  18750177 ctccaagtcaagtacgattaattatggagttcttatggaataagctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataa 18750276  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
      |||||||||||||||  || ||| ||||||||    
T  18750277 tccttccttcaaccatgcagttccaaacctgcac 18750310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 226 - 361
Target Start/End: Complemental strand, 42429306 - 42429170
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||| ||||||| || |||||||||| || |  | || |||||||| |||||| || |||||| ||| ||||||||||||||||||||||||     
T  42429306 aagtcaagcacccttaactatgaagttcttatgtaacgggctacggaaaagaatatgcatattgttgataaaggtagtaccaaacaattcttataagtcc 42429207  T
Q  325 tccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    ||||||||||||||  || ||||||| ||| ||||||    
T  42429206 tccttcaaccatgtgttcacatacctacacggtctca 42429170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 222 - 332
Target Start/End: Original strand, 20858522 - 20858633
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||  ||||||| ||||||||||||||||||  | || |||||||||| ||||||| |||||||||  | |||||||||||||||||||    
T  20858522 ctccaagtcaagcaaccttaactatggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatatagaaaataccaaacaattcttataa 20858621  T
Q  321 gtcttccttcaa 332  Q
    | ||| ||||||    
T  20858622 gcctttcttcaa 20858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 272 - 395
Target Start/End: Original strand, 24182277 - 24182400
Alignment:
Q  272 aaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatcccttt 371  Q
    |||||||||||||||| ||| |||||  ||||||||| |||||||||||| |||||||||||||| | ||| ||||| |||||  |||||  |||||| |    
T  24182277 aaagaagatgcatcttgttggtatagatagtaccaaataattcttataagccttccttcaaccatttcgtctcatacttgcacgttctcaagatccctct 24182376  T
Q  372 catttcaatgtgatttggttgcct 395  Q
    ||||  |||||||||| |||||||    
T  24182377 cattctaatgtgatttcgttgcct 24182400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 240 - 386
Target Start/End: Original strand, 4657992 - 4658138
Alignment:
Q  240 taactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgt 338  Q
    |||||||| |||||||||||||||  | ||  |||||||||||||| || ||| |||||| |||| ||||||| |||||||| ||||| ||||||||||     
T  4657992 taactgtgaagttcttatggaatggactaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa-tcttcgttcaaccatga 4658090  T
Q  339 tgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
     ||| ||||||||||| || |||  |||||| | ||||| ||||||||    
T  4658091 agtctcatacctgcacggtttcaagatccctcttatttcgatgtgatt 4658138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 271 - 337
Target Start/End: Original strand, 16370739 - 16370805
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||| | |||| |||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  16370739 aaaagaagatacgtcttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatg 16370805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 11757266 - 11757347
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtacca 306  Q
    ||||||||||||||||||||||||||||||||||| ||  | || ||||||||||||||| || |||||||| | |||||||    
T  11757266 aagtcaagcacgcttaactgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatataagtagtacca 11757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 2058696 - 2058748
Alignment:
Q  280 tgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaa 332  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  2058696 tgcatcttgttgatataggtagtaccaaacaattcatataagtcttccttcaa 2058748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 4673466 - 4673569
Alignment:
Q  236 cgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaacc 334  Q
    ||||||||||||||||||||||||||||    ||  ||||||| ||||||||| |||||| |||   ||||||| |||||||||||| |||||||||| |    
T  4673466 cgcttaactgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataattcttataagacttccttcaatc 4673565  T
Q  335 atgt 338  Q
    ||||    
T  4673566 atgt 4673569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 329
Target Start/End: Original strand, 5066869 - 5066980
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||| ||| |||| |||| ||||||||| ||||| ||| | | ||  ||||||| ||||||||| |||||||||  | ||||||||||||||||    
T  5066869 ctactccaaggcaaacacgtttaattgtggagtttttatgaaatagactaccaaaaagaaaatgcatcttgttgatatagataataccaaacaattctta 5066968  T
Q  318 taagtcttcctt 329  Q
    ||||| ||||||    
T  5066969 taagttttcctt 5066980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 11160713 - 11160779
Alignment:
Q  272 aaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgt 338  Q
    |||||| ||||||||| |||| ||||  |||||||||||||| ||||||| ||||||||||| ||||    
T  11160713 aaagaatatgcatcttgttgacatagatagtaccaaacaattattataagccttccttcaactatgt 11160779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 17445306 - 17445348
Alignment:
Q  132 tgtaacatctcagacgacttttaggattgtcgactgactccac 174  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||    
T  17445306 tgtaacatcccaggcgacttttaggattgtcgactgaccccac 17445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 43356651 - 43356732
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgca 353  Q
    |||||||||||||| || ||| | ||||  ||||||||||||||||||||||| ||| |||| ||||  ||| ||||||||||    
T  43356651 aaaagaagatgcatattgttggtttaggttgtaccaaacaattcttataagtcatcc-tcaatcatgcagtctcatacctgca 43356732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 4102961 - 4102924
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatgg 259  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  4102961 ctccaagtcaagcacgtttaactgtgaagttcttatgg 4102924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 22975076 - 22975156
Alignment:
Q  306 aaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||||||||||||||||  || |||||||||||  ||| ||||||||||| | ||||  |||||| ||||| | ||||||||    
T  22975076 aaacaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccgatgtgatt 22975156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 39801498 - 39801578
Alignment:
Q  276 aagatgcatcttattgatataggcagtaccaaacaattctta-taagtcttccttcaaccatgttgtcccatacctgcaca 355  Q
    |||||||||||| |||||||||| |||||||||| ||| |||  |||||||| || |||||| | ||| ||||| ||||||    
T  39801498 aagatgcatcttgttgatataggtagtaccaaacgatttttagaaagtcttcttttaaccatatagtctcatacttgcaca 39801578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 6e-45; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 220 - 391
Target Start/End: Complemental strand, 16379560 - 16379388
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | ||  ||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  16379560 tactccaagtcaaacacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtat 16379461  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||||||||||||||||||  ||||||||||||||| | |||   |||||| ||||| |||| ||||| ||||    
T  16379460 aagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatccctctcattccaatttgattcggtt 16379388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 8256691 - 8256562
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  8256691 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 8256592  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  8256591 gccttccttcaaccatgtagtcccatacct 8256562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 41754454 - 41754321
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  41754454 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 41754355  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  ||| |||||||||||    
T  41754354 gccttccttcaaccatgcagtctcatacctgcac 41754321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 220 - 386
Target Start/End: Complemental strand, 33175124 - 33174958
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||  | ||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  33175124 tactccaagtcaa-cacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttat 33175026  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||| |||||||||||||||| ||||||||||| ||| | ||||  |||||| ||||| | ||||||||    
T  33175025 aagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattccgatgtgatt 33174958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 29804844 - 29804718
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    |||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||| ||||||||||||||| |    
T  29804844 caagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcc 29804745  T
Q  324 ttccttcaaccatgttgtcccatacct 350  Q
    | ||||||||||||| |||||||||||    
T  29804744 tgccttcaaccatgtagtcccatacct 29804718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 219 - 391
Target Start/End: Complemental strand, 33174671 - 33174500
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33174671 ctactccaagtcaagcacgcttaactgcggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctta 33174572  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    |||| |||||||||||  ||| ||||||||||| ||| |  |||  |||||| ||||| | |||||||| ||||    
T  33174571 taagccttccttcaac--tgtagtcccatacctacacggcatcaggatccctctcattccgatgtgattcggtt 33174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 375
Target Start/End: Complemental strand, 16379105 - 16378948
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||| |||||||||| |||| |||||||||| ||    
T  16379105 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgta 16379006  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    |||| |||||||||||||||  ||| ||||| ||||| | |||  ||||||| |||||    
T  16379005 taagacttccttcaaccatgcagtctcatacttgcacggcctcggaatccctctcatt 16378948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 24818491 - 24818326
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || ||||| |||||||||||| |||||||||| ||||| |||||||||||||||    
T  24818491 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataa 24818392  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | ||||||| |||||||  ||||||||| ||||| | ||||  |||||| ||||| | ||||||||    
T  24818391 gccttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgtgatt 24818326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 25337978 - 25338111
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | |  |||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  25337978 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataa 25338077  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||  |||||||||||||||    
T  25338078 gccttccttcaaccatgcagtcccatacctgcac 25338111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 223 - 351
Target Start/End: Complemental strand, 30966398 - 30966269
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||||||||||||||||||||| ||||||||||||||||||    || |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  30966398 tccaagtcaagcacgcttaactatggagttcttatggaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 30966299  T
Q  322 tcttccttcaaccatgttgtcccatacctg 351  Q
     |||||||||||||||  ||||||||||||    
T  30966298 ccttccttcaaccatgcagtcccatacctg 30966269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 30966855 - 30966728
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||| |||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30966855 ctccaagttaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 30966756  T
Q  321 gtcttccttcaaccatgttgtcccatac 348  Q
      |||||||||||||||  |||||||||    
T  30966755 tccttccttcaaccatgcagtcccatac 30966728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 219 - 361
Target Start/End: Complemental strand, 1707209 - 1707066
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||| |||||||| ||| |||||||||||||||||||||  |||  | ||  ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  1707209 ctacttcaagtcaaacactcttaactgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattctta 1707110  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    ||||||||||||||| ||||| ||| ||||||| ||||||||||    
T  1707109 taagtcttccttcaatcatgtagtctcatacctacacagtctca 1707066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 11388352 - 11388224
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||| || |||    
T  11388352 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaa 11388254  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |  ||||||||||||||| ||| |||||||    
T  11388253 gcattccttcaaccatgtagtctcatacct 11388224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 33771166 - 33771037
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||| |||||||||||||||||||||| ||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  33771166 ctccaagtcaagcatgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 33771067  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | ||| |||||||| ||  |||||||||||    
T  33771066 gcctttcttcaaccctgcagtcccatacct 33771037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 11394698 - 11394571
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||||||||||||||||||||||||| ||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||| || ||||    
T  11394698 ctccaagtcaagcacgcttaactgtgaagttcttatggaatagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaag 11394600  T
Q  322 tcttccttcaaccatgttgtcccatacct 350  Q
      ||||||||||||||| ||| |||||||    
T  11394599 cattccttcaaccatgtagtctcatacct 11394571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 220 - 350
Target Start/End: Complemental strand, 1912691 - 1912561
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  1912691 tactccaagtcaatcacgcttaactgtggagttcttatggaatgggctacc-aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttat 1912593  T
Q  319 aagtcttccttcaaccatgttgtcccatacct 350  Q
    || ||| | ||||||||||| ||| |||||||    
T  1912592 aaatctactttcaaccatgtagtctcatacct 1912561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 5399798 - 5399913
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||| || |||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  5399798 ctccaagtcaagcacgcttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 5399897  T
Q  321 gtcttccttcaaccat 336  Q
    | || |||| ||||||    
T  5399898 gcctcccttaaaccat 5399913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 221 - 375
Target Start/End: Original strand, 25434036 - 25434191
Alignment:
Q  221 actccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttata 319  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||   |||| ||||||||||| |||||| |||  ||| |||||||||||||||    
T  25434036 actccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttata 25434135  T
Q  320 agtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    || |||||||||||||||  |||||||||| |||| | ||||  |||||| |||||    
T  25434136 agccttccttcaaccatgaagtcccataccagcacggcctcaggatccctctcatt 25434191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 185 - 386
Target Start/End: Original strand, 27882874 - 27883072
Alignment:
Q  185 aaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgca 283  Q
    ||||||||||| ||| || | ||||||||||||    ||||||||||| ||||||||| |||||||||||||||||| | |  ||  |||||||||||||    
T  27882874 aaacttctcagtaggtcacctatccaaagacta----ctccaagtcaaacacgcttaattgtggagttcttatggaacggcctacaaaaaagaagatgca 27882969  T
Q  284 tcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtg 383  Q
    ||||||||||||||  | ||||||||||||||||||||  |||||||||| |||  ||| ||||| ||||| | ||||  |||||| |||||||  ||||    
T  27882970 tcttattgatatagataataccaaacaattcttataagcattccttcaacaatgcagtctcatacatgcacggcctcaggatccctctcatttcggtgtg 27883069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 226 - 386
Target Start/End: Original strand, 29259605 - 29259766
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||| || |||||||||| ||||  | || |||||||||||||||||| |||||||| | |||||||||||||| | ||||| ||    
T  29259605 aagtcaagcacgcttaactatgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagcct 29259704  T
Q  325 tccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||||||||||||  ||||||||| || || ||||||  |||||| ||||| | ||||||||    
T  29259705 tccttcaaccatgcagtcccatacttgtacggtctcaggatccctctcattccgatgtgatt 29259766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 38898890 - 38899010
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||   ||  ||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  38898890 ctactctaagtcaagcacgcttaactgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattctta 38898989  T
Q  318 taagtcttccttcaaccatgt 338  Q
    ||||   ||||||||||||||    
T  38898990 taagctctccttcaaccatgt 38899010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 223 - 395
Target Start/End: Complemental strand, 83181 - 83008
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    ||||| |||| ||||||||||||| ||||||||||||||||  | ||  |||| ||||| |||||| ||| |||||| |||||||||| |||||||||||    
T  83181 tccaaatcaaacacgcttaactgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtataggtagtaccaaacgattcttataag 83082  T
Q  322 tcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggttgcct 395  Q
      | ||||||||||||| ||| |||||||||||| |||||  |||||| ||||||| | ||||||  |||||||    
T  83081 cataccttcaaccatgtagtctcatacctgcacaatctcaggatccctctcatttcgacgtgattcagttgcct 83008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 224 - 375
Target Start/End: Complemental strand, 8074055 - 8073903
Alignment:
Q  224 ccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagt 322  Q
    |||||||||| | ||||| || ||||||||||||| ||||  | ||   |||||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  8074055 ccaagtcaagaaggcttatctatggagttcttatgaaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagt 8073956  T
Q  323 cttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    || ||||||||| | | | |||||||||||||| |||||| |||||| |||||    
T  8073955 ctcccttcaaccttatagacccatacctgcacaatctcatgatccctctcatt 8073903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 391
Target Start/End: Original strand, 18098874 - 18099029
Alignment:
Q  237 gcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaacca 335  Q
    |||||||| ||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||  | ||||||||||    
T  18098874 gcttaactatggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaacca 18098973  T
Q  336 tgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||| ||| ||||||| ||| | ||||  || ||| ||||| | |||||||| ||||    
T  18098974 tgtagtctcatacctacacggcctcaggattcctctcattccgatgtgattcggtt 18099029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 1953270 - 1953187
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||||||||||  ||| |||||||||||    
T  1953270 aaaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcac 1953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 30963703 - 30963817
Alignment:
Q  224 ccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagt 322  Q
    ||||||||||||||||||||||||||||| ||||||  ||  | ||   |||||||||||||||| |||||||||| || |||| |||||||||||||||    
T  30963703 ccaagtcaagcacgcttaactgtggagttattatggtttgggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaattcttataagt 30963802  T
Q  323 cttccttcaaccatg 337  Q
     ||||||||||||||    
T  30963803 tttccttcaaccatg 30963817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 276 - 391
Target Start/End: Original strand, 18447954 - 18448069
Alignment:
Q  276 aagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    |||||||||||| |||||| | | |||||||||||||||||||||||||| |||||||||||| ||| ||||||| ||| | ||||  |||||| |||||    
T  18447954 aagatgcatcttgttgatacaagtagtaccaaacaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcatt 18448053  T
Q  376 tcaatgtgatttggtt 391  Q
     | |||||||| ||||    
T  18448054 ccgatgtgattcggtt 18448069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 184 - 354
Target Start/End: Complemental strand, 15620097 - 15619930
Alignment:
Q  184 gaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcga-ctgaaaagaagatgc 282  Q
    |||||||| ||| ||| || ||||||||||||||    ||| ||||||||||||||||| ||||||||||||||||| ||     |  |||||||||||     
T  15620097 gaaacttcccagtaggtcacccatccaaagacta----ctcaaagtcaagcacgcttaattgtggagttcttatggattgggtttccaaaaagaagatgt 15620002  T
Q  283 atcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||||| |||  ||| ||||| |||||    
T  15620001 atcttgttgatataggtagtaccaaacaattcttataagcttgccttcaactatgcagtctcatacttgcac 15619930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 13191136 - 13191023
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    |||||||||||| | ||||| ||||||||||||  ||||  | ||  ||||||||||||||||| ||| |||| | ||||||||||||||||||||||||    
T  13191136 caagtcaagcacacataactatggagttcttataaaatggactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataagtc 13191037  T
Q  324 ttccttcaaccatg 337  Q
    |||||| |||||||    
T  13191036 ttccttgaaccatg 13191023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 222 - 337
Target Start/End: Original strand, 30963244 - 30963360
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||| || ||||||||   ||  | ||  |||| |||||||||||| |||||||||| |||||| ||||||||||||||    
T  30963244 ctccaagtcaagcacgcttaactgttgaattcttatgatttgggctaccaaaaataagatgcatcttgttgatataggtagtacctaacaattcttataa 30963343  T
Q  321 gtcttccttcaaccatg 337  Q
    | |||||||||| ||||    
T  30963344 gccttccttcaatcatg 30963360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 20502138 - 20502055
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||| |||| ||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||  ||||||||| |||||    
T  20502138 aaaaaaagaagcatcttgttgatatagaaagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacttgcac 20502055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 329
Target Start/End: Original strand, 30961868 - 30961972
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    |||||||||||| |||||||||||||||||||||  | | | || ||||| || ||||||||| |||||||||| |||||||| ||| ||||||||| ||    
T  30961868 aagtcaagcacgtttaactgtggagttcttatggtttcggctaccgaaaaaaatatgcatcttgttgatataggtagtaccaatcaaatcttataagact 30961967  T
Q  325 tcctt 329  Q
    |||||    
T  30961968 tcctt 30961972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 16542100 - 16542033
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgt 338  Q
    |||| ||||| |||||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  16542100 aaaaaaagatacatcttgttgatataggtagtacaaaacaattattataagtcttccttcaaccatgt 16542033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 15639933 - 15639799
Alignment:
Q  184 gaaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgc 282  Q
    |||||||| ||| ||| || ||||||||||||||    ||||||||||||||||||||| |||||||||||| |||| | |    |  |||||||||||     
T  15639933 gaaacttcccagtaggtcacccatccaaagacta----ctccaagtcaagcacgcttaattgtggagttcttgtggattgggtttccaaaaagaagatgt 15639838  T
Q  283 atcttattgatataggcagtaccaaacaattcttataag 321  Q
    || || |||||||||| ||||||||||||||| ||||||    
T  15639837 atgttgttgatataggtagtaccaaacaattcctataag 15639799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 8181394 - 8181446
Alignment:
Q  283 atcttattgatataggcagtaccaaacaattcttataagtcttccttcaacca 335  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  8181394 atcttgttgatataggtagtaccaaacaattcttaaaagtcttccttcaacca 8181446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 36924453 - 36924519
Alignment:
Q  271 aaaagaagatgcatcttattgatatag--gcagtaccaaacaattcttataagtcttccttcaacca 335  Q
    ||||||||||||||||| ||||||||   | | |||||||||||||||||||| |||||||||||||    
T  36924453 aaaagaagatgcatcttgttgatatataagtaataccaaacaattcttataagccttccttcaacca 36924519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 32377697 - 32377738
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg 263  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  32377697 ctccaagtcaagcatgcttaactgtggagttcttttggaatg 32377738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 32377888 - 32377921
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttctt 255  Q
    ||||||||||| ||||||||||||||||||||||    
T  32377888 ctccaagtcaaacacgcttaactgtggagttctt 32377921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 91; Significance: 9e-44; HSPs: 2)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 222 - 375
Target Start/End: Original strand, 2032 - 2186
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2032 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 2131  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    | |||||||||||||||  ||| ||||||||||| | ||||  | ||||||||||    
T  2132 gccttccttcaaccatgcagtctcatacctgcacggcctcaggaaccctttcatt 2186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 1902 - 1944
Alignment:
Q  132 tgtaacatctcagacgacttttaggattgtcgactgactccac 174  Q
    ||||||||| || ||||||||||||||||||||||||| ||||    
T  1902 tgtaacatcccaaacgacttttaggattgtcgactgaccccac 1944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 386
Target Start/End: Original strand, 107444 - 107609
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| ||||||| || |||| ||||||||||||||||    
T  107444 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataa 107543  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | |||||||||||||||  |||||||||||| || | |||| ||||||| ||||| | ||||||||    
T  107544 gccttccttcaaccatgcagtcccatacctgtacggcctcagaatccctctcattccgatgtgatt 107609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 154922 - 154793
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| |||||| ||| |||||| ||||||||||||||    
T  154922 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataa 154823  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| |||||||||||    
T  154822 gccttccttcaaccatgtagtcccatacct 154793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 1385 - 1253
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  1385 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataa 1286  T
Q  321 gtcttccttcaaccatgttgtcccatacctgca 353  Q
    | |||||||||||||||  ||||||||||||||    
T  1285 gccttccttcaaccatgcagtcccatacctgca 1253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 387
Target Start/End: Complemental strand, 19131 - 18965
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  19131 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataa 19032  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgattt 387  Q
    | |||||||||||||||  ||||||||||||||| | |||   |||||| ||||| | |||||||||    
T  19031 gccttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattt 18965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 387
Target Start/End: Original strand, 13191494 - 13191660
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||| ||||||||||||| |  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  13191494 ctccaagtcaagcacgcttaactgtgaagttcttatggaacgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 13191593  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgattt 387  Q
    | |||||||||||||||  ||||||||||| || ||||| |  |||||| ||||| | |||||||||    
T  13191594 gccttccttcaaccatgcagtcccatacctacatagtcttaggatccctctcattccgatgtgattt 13191660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 387
Target Start/End: Original strand, 17027512 - 17027678
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | || |||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  17027512 ctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataa 17027611  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgattt 387  Q
    | |||||||||||||||  ||||||||||||||| | |||   |||||| ||||| | |||||||||    
T  17027612 gccttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattt 17027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 375
Target Start/End: Complemental strand, 20850486 - 20850332
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | || |||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  20850486 ctccaagtcaagcacgcttaactgtagagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataa 20850387  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    | |||||||||||||||  ||||||||||||||| | ||||| | |||| |||||    
T  20850386 gccttccttcaaccatgcagtcccatacctgcacggcctcatgaaccctctcatt 20850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 9352227 - 9352062
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| || ||||||| |||||||||||| | ||||||    
T  9352227 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataa 9352128  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| ||||| ||||||| ||| ||||||| ||||| ||||  |||||| ||||||| ||||||||    
T  9352127 gtctcccttcgaccatgtagtctcatacctacacagcctcaggatccctctcatttcgatgtgatt 9352062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 16520133 - 16519968
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||| ||| ||||    
T  16520133 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataa 16520034  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | |||||||| ||||||| ||| ||||||| ||||| ||||  |||||| ||||| | ||||||||    
T  16520033 gccttccttcgaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgatt 16519968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 350
Target Start/End: Original strand, 20896669 - 20896798
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||| |||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  20896669 ctccaagccaagcacgcttaaccgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 20896768  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    | |||||||||||||||| ||| |||||||    
T  20896769 gccttccttcaaccatgtagtctcatacct 20896798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 226 - 361
Target Start/End: Complemental strand, 13492950 - 13492814
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||    
T  13492950 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagcct 13492851  T
Q  325 tccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    |||||||||||||  ||| ||||||||||||| ||||    
T  13492850 tccttcaaccatgcagtctcatacctgcacagcctca 13492814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 220 - 350
Target Start/End: Original strand, 6330891 - 6331022
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  | || ||||||||||||||| || |||||||||| |||||||||||||||||||    
T  6330891 tactcaaagtcaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttat 6330990  T
Q  319 aagtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||||||||||| ||| |||||||    
T  6330991 aagtcttccttcaaccatgtagtctcatacct 6331022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 7912043 - 7911910
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||| || ||||||||||||||||||||||||  | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  7912043 ctccaagtcaagcaagcataactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 7911944  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    || ||||||||||||||  |||| ||||||||||    
T  7911943 gttttccttcaaccatgcagtcctatacctgcac 7911910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 20126160 - 20126328
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | ||  ||||||||||||||||| |||||||||| |||| ||||| |||||||    
T  20126160 ctactccaagtcaagcacgcttaattgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattctta 20126259  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| |||||||||||||||| ||| ||||||| ||||| || |  |||||| ||||| | ||||||||    
T  20126260 taagccttccttcaaccatgtagtctcatacctacacagccttaggatccctctcattccgatgtgatt 20126328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 219 - 361
Target Start/End: Complemental strand, 11062453 - 11062310
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  11062453 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttctta 11062354  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    |||| |||||||||||||||| ||  ||||||| ||||| ||||    
T  11062353 taagccttccttcaaccatgtagtttcatacctacacagcctca 11062310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 225 - 354
Target Start/End: Original strand, 2890823 - 2890953
Alignment:
Q  225 caagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtc 323  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||| |||||||||| ||| || ||||||||||||||  |    
T  2890823 caagtcaagcacgcttaactgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaacc 2890922  T
Q  324 ttccttcaaccatgttgtcccatacctgcac 354  Q
    ||||||||||||||  |||||||||||||||    
T  2890923 ttccttcaaccatgcagtcccatacctgcac 2890953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 7912475 - 7912342
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||| |||||| ||||||||||||||||||  | || |||||||| ||||||||| |||||||||| ||||||||||||||| |||||    
T  7912475 ctccaagtcaagcacgtttaactatggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataa 7912376  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    || ||||||||||||||  |||||||||||||||    
T  7912375 gttttccttcaaccatgcagtcccatacctgcac 7912342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 391
Target Start/End: Complemental strand, 3652634 - 3652481
Alignment:
Q  239 ttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatg 337  Q
    |||||||||||||||||||||||||  | ||  ||||||||||||||||| |||||||||| |||| || |||||||||||||| |||||||||||||||    
T  3652634 ttaactgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatg 3652535  T
Q  338 ttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    | ||||||||||| ||||| ||||  |||||| ||||| | |||||||| ||||    
T  3652534 tagtcccatacctacacagcctcaggatccctctcattccgatgtgattcggtt 3652481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 222 - 375
Target Start/End: Complemental strand, 21312136 - 21311982
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||| |||||| |||| |||||||| ||||  | ||  ||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  21312136 ctccaagtcaagcacgtttaactatggatttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataa 21312037  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    | |||||||||||||||  ||| ||||||||||||| ||||| | |||| |||||    
T  21312036 gccttccttcaaccatgcagtctcatacctgcacagcctcatgaaccctctcatt 21311982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 23986298 - 23986468
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||| |||||||||| |||||||||||  ||  | || |||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  23986298 ctccaagtcaagcacacttaactgtgaagttcttatggtttgagctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataa 23986397  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    | || ||||||||||||| ||||||||||| ||| | |||   |||||| ||||| | |||||||| ||||    
T  23986398 gcctaccttcaaccatgtagtcccatacctacacggcctccggatccctctcattccgatgtgattcggtt 23986468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 23776605 - 23776477
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||| |||||||| |||| |||||||||| ||||  | || |||||||||||||||||| |||||||||| ||||||| || ||||||||||    
T  23776605 ctccaagtcaagtacgcttaa-tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataa 23776507  T
Q  321 gtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||||||||| |||||||||||    
T  23776506 gtcttccttcaaccatgtagtcccatacct 23776477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 231 - 350
Target Start/End: Original strand, 2681206 - 2681326
Alignment:
Q  231 aagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttcctt 329  Q
    |||||||||||| ||||||||||||||||||||  | || |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||    
T  2681206 aagcacgcttaattgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataagtcttcatt 2681305  T
Q  330 caaccatgttgtcccatacct 350  Q
    ||||||||  |||||| ||||    
T  2681306 caaccatgcagtcccaaacct 2681326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 222 - 386
Target Start/End: Original strand, 17731090 - 17731259
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatct----tattgatataggcagtaccaaacaattctt 316  Q
    ||||||||||||||||||||| |||||||||||||  |||||  | || |||||||||||||||||    | |||||||||| |||||||||||||||||    
T  17731090 ctccaagtcaagcacgcttaaatgtggagttcttaaagaatgagctaccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaattctt 17731189  T
Q  317 ataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    ||||||||||||| |||||||  |||||||||||| || | ||||  |||||| ||||| | ||||||||    
T  17731190 ataagtcttcctttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccgatgtgatt 17731259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 218 - 395
Target Start/End: Complemental strand, 20735864 - 20735686
Alignment:
Q  218 gctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctt 316  Q
    ||||||||||| ||| ||| ||||||| ||||||| |||| |||||  | || |||||||||||||||||| |||||||| | |||| ||||||||||||    
T  20735864 gctactccaagccaaccacacttaactatggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatataagtagtatcaaacaattctt 20735765  T
Q  317 ataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggttgcct 395  Q
    ||||| |||||| ||| ||||| ||| ||||||| ||||||||||  |||||| |||||   ||||||| |||||||||    
T  20735764 ataagccttcctacaatcatgtagtcacatacctacacagtctcaagatccctctcattatgatgtgatctggttgcct 20735686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 219 - 354
Target Start/End: Original strand, 2720541 - 2720678
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaa-gatgcatcttattgatataggcagtaccaaacaattctt 316  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  | ||  |||| || ||||  |||| || ||||||| |||||||||||||||||    
T  2720541 ctactccaagtcaagcacacttaactgtggagttcttatggaatgagctaccaaaaaaaaagatgtgtcttgttaatataggtagtaccaaacaattctt 2720640  T
Q  317 ataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||||||||||  ||| |||||||||||    
T  2720641 ataagtcttccttcaaccatgcagtctcatacctgcac 2720678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 14771697 - 14771829
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||| |   ||  ||||||| ||| ||||| |||||||||| ||||||||||||||||||    
T  14771697 ctactccacgtctagcacacttaactgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattctta 14771796  T
Q  318 taagtcttccttcaaccatgttgtcccatacct 350  Q
    ||||||||||||||||||||  ||| |||||||    
T  14771797 taagtcttccttcaaccatgcagtctcatacct 14771829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 234 - 348
Target Start/End: Complemental strand, 15929735 - 15929620
Alignment:
Q  234 cacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaa 332  Q
    ||||||||||||||||||||||||||||||  | || ||||||||||||||| || |||||||||| ||||||||| |||||||||||| |||| |||||    
T  15929735 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagccttcattcaa 15929636  T
Q  333 ccatgttgtcccatac 348  Q
    |||||| |||| ||||    
T  15929635 ccatgtagtccaatac 15929620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 222 - 321
Target Start/End: Complemental strand, 13492497 - 13492397
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||||||||||||||||||||   | || |||||||||||||||||| |||||||||| | || ||||||||||||||||    
T  13492497 ctccaagtcaagcacgcttaactgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataa 13492398  T
Q  321 g 321  Q
    |    
T  13492397 g 13492397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 17851542 - 17851406
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||||||||| |||||||||||||| |||||  | ||  ||||||||||||||||| |||||| ||| |||||||||||  |||||    
T  17851542 ctactccaagtcaagcacgcttaattgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatctta 17851443  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||| |||| || |||||||  ||||||||| |||||    
T  17851442 taagccttcttttaaccatgcagtcccatacttgcac 17851406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 386
Target Start/End: Complemental strand, 21311683 - 21311515
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||| |||||||||||||||||||| |||||||||||||||||  |  |  ||||||||||| ||||| || || |||| | ||||||||||||||||    
T  21311683 ctactcaaagtcaagcacgcttaactgcggagttcttatggaatgagcttccaaaaagaagatggatcttgtttatctaggtaataccaaacaattctta 21311584  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||| |||||||||||||||  ||||||||| || || | ||||| | |||| ||||| | ||||||||    
T  21311583 taaggcttccttcaaccatgcagtcccatacttgtacggcctcatgaaccctctcattccgatgtgatt 21311515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 219 - 351
Target Start/End: Complemental strand, 20732746 - 20732613
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||||||||||||| |||||| || ||||| |||| |||||  | || |||||||| |||||| ||||| ||||||| ||||||||| ||||||||    
T  20732746 ctactccaagtcaagcactcttaaccgtagagtttttattgaatgggctaccgaaaagaatatgcatattattaatataggtagtaccaaataattctta 20732647  T
Q  318 taagtcttccttcaaccatgttgtcccatacctg 351  Q
    |||| |||||| ||||||||| ||| ||||||||    
T  20732646 taagccttcctacaaccatgtagtcacatacctg 20732613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 27334301 - 27334193
Alignment:
Q  247 ggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtccca 345  Q
    |||||||||||||||||  | || ||||||||||| |||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||  || |||    
T  27334301 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27334202  T
Q  346 tacctgcac 354  Q
    |||||||||    
T  27334201 tacctgcac 27334193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 27395041 - 27394933
Alignment:
Q  247 ggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtccca 345  Q
    |||||||||||||||||  | || ||||||||||| |||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||  || |||    
T  27395041 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27394942  T
Q  346 tacctgcac 354  Q
    |||||||||    
T  27394941 tacctgcac 27394933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 9440290 - 9440423
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||| |||||||| |||||||||| |||||||||||| ||  | || |||||||| ||||||||| |||||||| | |||||| ||||||||||||||    
T  9440290 ctccaaatcaagcacacttaactgtgaagttcttatggagtgagctaccgaaaagaaaatgcatcttgttgatataagtagtaccgaacaattcttataa 9440389  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |  ||| ||||||||||  || ||||||||||||    
T  9440390 gctttcattcaaccatgcagttccatacctgcac 9440423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 354
Target Start/End: Original strand, 33774950 - 33775118
Alignment:
Q  185 aaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgtcgact---gaaaagaagatg 281  Q
    ||||||||||| ||| || ||||||||||||||    || |||||||| ||| ||||||||||||||||||||||||||  ||||    |||||||||||    
T  33774950 aaacttctcagtaggtcacccatccaaagacta----ctgcaagtcaaacacacttaactgtggagttcttatggaatg--gactatcaaaaagaagatg 33775043  T
Q  282 ca--tcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    ||  |||| |||||||||| || |||| |||||||||||||  |||||||||||||||  ||| ||||| |||||    
T  33775044 catctcttgttgatataggtagcaccagacaattcttataatccttccttcaaccatgcggtcacatacttgcac 33775118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 219 - 354
Target Start/End: Complemental strand, 17851086 - 17850950
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | | ||   |||||||||||||||| |||||| ||| |||||||||||  |||||    
T  17851086 ctactccaagtcaagcacgcttaactgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgataaaggtagtaccaaacatatctta 17850987  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | ||  ||| || |||||||  ||||||||| |||||    
T  17850986 tcagcattcttttaaccatgcagtcccatacttgcac 17850950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 350
Target Start/End: Complemental strand, 15929338 - 15929235
Alignment:
Q  248 gagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccat 346  Q
    ||||||||||||||||  | || |||||||| |||||||||||||||||||||| ||||||||||||||||||||  || |||||||| ||| ||| |||    
T  15929338 gagttcttatggaatgagctaccgaaaagaatatgcatcttattgatataggcattaccaaacaattcttataagcttttcttcaaccttgtagtctcat 15929239  T
Q  347 acct 350  Q
    ||||    
T  15929238 acct 15929235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 9440842 - 9440971
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||| ||| |||||||||| |||||||||||  ||  | ||||||||||| ||||||||| |||||| | | ||||||||| ||||||||||||  |    
T  9440842 aagtcaaacacacttaactgtgaagttcttatggtttgggctactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaattcttataagcat 9440941  T
Q  325 tccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||| || |||| |||||||    
T  9440942 tccttcaaccatgtagttccatgcctgcac 9440971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 391
Target Start/End: Original strand, 31821723 - 31821843
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctt 370  Q
    |||| |||||||||||| |||||||||  ||||||||| ||||||||||||  ||||||||||||||| ||| ||||||| ||  | ||||| ||||||     
T  31821723 aaaaaaagatgcatcttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcatacctacatggcctcatgatccctc 31821822  T
Q  371 tcatttcaatgtgatttggtt 391  Q
    ||||| | |||||||| ||||    
T  31821823 tcattccgatgtgattcggtt 31821843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 28780275 - 28780206
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttatt 290  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || ||||| |||||||||||||||    
T  28780275 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatcttatt 28780206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 226 - 354
Target Start/End: Complemental strand, 32293044 - 32292917
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtct 324  Q
    ||||||||  ||||||||| ||||||||||||  |||||   ||| |||| |||||| || || ||| |||||| |||||||||||||||||||||| ||    
T  32293044 aagtcaagttcgcttaactatggagttcttat--aatgtgttactaaaaacaagatgtattttgttggtataggtagtaccaaacaattcttataagcct 32292947  T
Q  325 tccttcaaccatgttgtcccatacctgcac 354  Q
    || ||||||||||  ||| |||||||||||    
T  32292946 tcattcaaccatgcagtctcatacctgcac 32292917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 352
Target Start/End: Complemental strand, 1991751 - 1991587
Alignment:
Q  185 aaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgca 283  Q
    |||||| |||||||| || ||||||||| ||||    |||||| ||||  | | ||||||||| |||||||||| ||||  | || ||||||||||||||    
T  1991751 aaacttttcagaaggtcacccatccaaaaacta----ctccaaatcaataatgtttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgca 1991656  T
Q  284 tcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgc 352  Q
    |||| || | ||| | | ||||||||||||||| |||| |||| | ||||||||| ||| |||||||||    
T  1991655 tcttgtttagatatgtaataccaaacaattcttgtaagccttcttccaaccatgtagtctcatacctgc 1991587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 9440488 - 9440542
Alignment:
Q  300 agtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||||||||||| |||| ||||||||||  |||||||||||||||    
T  9440488 agtaccaaacaattcttataagccttcattcaaccatgaagtcccatacctgcac 9440542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 391
Target Start/End: Complemental strand, 12194493 - 12194325
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||| ||||| || |||||||||||||||||||||||||||    |   ||||||||||||||||| |||||||||  ||| ||||| || | ||||||    
T  12194493 ctccatgtcaaacatgcttaactgtggagttcttatggaatgaattataaaaaagaagatgcatcttgttgatatagatagtgccaaaaaaat-ttataa 12194395  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatttggtt 391  Q
    ||||| |||||| ||||  ||  |||| |||||| ||||||  || ||| ||||| |||||||||| ||||    
T  12194394 gtctttcttcaatcatgcagt-tcatatctgcacggtctcaggattcctctcattccaatgtgattcggtt 12194325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 337
Target Start/End: Complemental strand, 17205505 - 17205388
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    |||||||| ||||||| | |||||  ||||||||||||||||||  | ||  |||| |||||| ||||| ||| || ||| |||||||||||||||||||    
T  17205505 tactccaaatcaagcatgtttaacaatggagttcttatggaatgggctacc-aaaacaagatgaatcttgttggtaaaggtagtaccaaacaattcttat 17205407  T
Q  319 aagtcttccttcaaccatg 337  Q
    || ||||| ||||| ||||    
T  17205406 aattcttcattcaatcatg 17205388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 28583127 - 28583013
Alignment:
Q  223 tccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||| |||||| || |||| ||||||| |||||||||||||  | || | ||||| |||||||||| |||||||||   ||| |||| ||||||||||||    
T  28583127 tccatgtcaaggacacttagctgtggatttcttatggaatgaactaccggaaagatgatgcatcttgttgatatagatcgtatcaaataattcttataag 28583028  T
Q  322 tcttccttcaaccat 336  Q
     |||| |||||||||    
T  28583027 ccttcattcaaccat 28583013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 379
Target Start/End: Complemental strand, 10964404 - 10964312
Alignment:
Q  286 ttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaa 379  Q
    ||||||||||| | ||||||||||||||||| |||||||| |||| |||||   ||| |||||||| ||| ||| | ||||||| |||||||||    
T  10964404 ttattgatatatgtagtaccaaacaattcttgtaagtctttcttctaccatacagtctcatacctgaacaatctta-aatccctctcatttcaa 10964312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 354
Target Start/End: Original strand, 30729870 - 30729953
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    ||||||||||  ||| | || ||||| | |||||||||||||| |||| |||| ||||||||||||| |||| ||||| |||||    
T  30729870 aaaagaagatcaatcatgtttatatacgtagtaccaaacaatttttatgagtcctccttcaaccatgctgtctcatacttgcac 30729953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 28065869 - 28065919
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataag 321  Q
    |||| |||||||||||| |||||| ||  ||||||||||||||||||||||    
T  28065869 aaaaaaagatgcatcttgttgatagagatagtaccaaacaattcttataag 28065919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 3652691 - 3652658
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagtt 252  Q
    ||||||||||||||||| ||||||||||||||||    
T  3652691 ctactccaagtcaagcaagcttaactgtggagtt 3652658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 9441135 - 9441082
Alignment:
Q  301 gtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    |||||||||||||||||||||  ||||||||| ||||| ||| |||| ||||||    
T  9441135 gtaccaaacaattcttataagctttccttcaatcatgtagtcacatatctgcac 9441082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 2891271 - 2891315
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatg 263  Q
    ||||||||| ||||||||  |||||||||||||| ||||||||||    
T  2891271 ctactccaaatcaagcacatttaactgtggagtttttatggaatg 2891315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 86; Significance: 9e-41; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 222 - 354
Target Start/End: Original strand, 2191 - 2324
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||| | |||||||||||||||   | || |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2191 ctccaagtcaagcacgcttaactattgagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataa 2290  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcac 354  Q
    | |||||||||||||||| |||||||||||||||    
T  2291 gccttccttcaaccatgtagtcccatacctgcac 2324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 2059 - 2103
Alignment:
Q  130 gatgtaacatctcagacgacttttaggattgtcgactgactccac 174  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  2059 gatgtaacatcccagacaacttttaggattgtcgactgaccccac 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 2517 - 2554
Alignment:
Q  132 tgtaacatctcagacgacttttaggattgtcgactgac 169  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  2517 tgtaacatcccagacaacttttaggattgtcgactgac 2554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 222 - 387
Target Start/End: Complemental strand, 105885 - 105719
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  105885 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataa 105786  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgattt 387  Q
    | |||||||||||| ||  || ||||||||| || | ||||  |||||| ||||| | |||||||||    
T  105785 gccttccttcaaccctgcagttccatacctgtacggcctcaggatccctctcattccgatgtgattt 105719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 83; Significance: 5e-39; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 222 - 351
Target Start/End: Original strand, 162659 - 162789
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||||||||||||||||||| |||||||||||||||||  | || |||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  162659 ctccaagtcaagcacgcttaactgcggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataa 162758  T
Q  321 gtcttccttcaaccatgttgtcccatacctg 351  Q
    |||||||||||||||||  ||| ||||||||    
T  162759 gtcttccttcaaccatgcagtcacatacctg 162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 185 - 359
Target Start/End: Original strand, 69763 - 69934
Alignment:
Q  185 aaacttctcagaaggccatccatccaaagactagctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgca 283  Q
    ||||||| | ||||| || ||||||||||||||    |||| |||||||| ||| ||||||||||||||||||||||||  | | |||||| ||||||||    
T  69763 aaacttccctgaaggtcacccatccaaagacta----ctcctagtcaagcccgcataactgtggagttcttatggaatgagctaatgaaaaaaagatgca 69858  T
Q  284 tcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtct 359  Q
    || | |||||||||| |||||||||||||| |||||||  |||||||||| |||  ||| |||||||||| |||||    
T  69859 tcatgttgatataggtagtaccaaacaattattataagcattccttcaacgatgcagtctcatacctgcatagtct 69934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 163115 - 163181
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatctt 287  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || ||||| ||||||||||||    
T  163115 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 163236 - 163170
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatctt 287  Q
    |||||||||||||||||||||||||||| ||||||  |||||  | || ||||||||||||||||||    
T  163236 ctccaagtcaagcacgcttaactgtggaattcttaaagaatgagctaccgaaaagaagatgcatctt 163170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 386
Target Start/End: Complemental strand, 10465 - 10300
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || ||||| |||||||||||| |||||||||| ||||| |||||||||||||||    
T  10465 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataa 10366  T
Q  321 gtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    | ||||||| |||||||  ||||||||| ||||| | ||||  |||||| ||||| | ||||||||    
T  10365 gccttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgtgatt 10300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 219 - 386
Target Start/End: Original strand, 18113 - 18280
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||   | ||  |||| |||||||||||| |||||||||| |||| |||||||||||||    
T  18113 ctactccaagtcaagcacgcttaactgtggagttcttatggaattagctaccaaaaa-aagatgcatcttgttgatataggtagtatcaaacaattctta 18211  T
Q  318 taagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatttcaatgtgatt 386  Q
    |||||||||||||||| |||| ||| ||||||| ||| | ||||  |||||| ||||| | ||||||||    
T  18212 taagtcttccttcaactatgtagtcacatacctacacggcctcaggatccctctcattccgatgtgatt 18280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 17577 - 17733
Alignment:
Q  220 tactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttat 318  Q
    ||||||||||||||||||||||||||||||||||||||| | ||  | ||  |||||||||| |||| | |||||||||| |||||||||||||||||||    
T  17577 tactccaagtcaagcacgcttaactgtggagttcttatgaattgagctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttat 17676  T
Q  319 aagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    |||  ||||||||||||||| ||||||||||| ||| | ||||  |||||| |||||    
T  17677 aagctttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcatt 17733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 228 - 375
Target Start/End: Complemental strand, 245674 - 245526
Alignment:
Q  228 gtcaagcacgcttaactgtggagttcttatggaat-gtcgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttc 326  Q
    ||||||||||||||||||||||||||||||||  | | | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  | |    
T  245674 gtcaagcacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcc 245575  T
Q  327 cttcaaccatgttgtcccatacctgcacagtctcataatccctttcatt 375  Q
    |||||||||||  ||||||||||| ||| | ||||  ||||||||||||    
T  245574 cttcaaccatgaagtcccatacctacacggactcaagatccctttcatt 245526  T

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Target: scaffold0005; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 245200 - 245122
Alignment:
Q  272 aaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacct 350  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  245200 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacct 245122  T

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Target: scaffold0005; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 245713 - 245676
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatgg 259  Q
    ||||||||||||||||||||||||||||||||||||||    
T  245713 ctccaagtcaagcacgcttaactgtggagttcttatgg 245676  T

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Target: scaffold0557 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 2273 - 2153
Alignment:
Q  219 ctactccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattctta 317  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||  | ||  ||||||||||||||||| || ||||||| ||||||||||||||||||    
T  2273 ctactccatgtcaagcatgcttaactgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattctta 2174  T
Q  318 taagtcttccttcaaccatgt 338  Q
    |||| ||||||||||||||||    
T  2173 taagccttccttcaaccatgt 2153  T

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Target: scaffold0333 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 4726 - 4594
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttataa 320  Q
    |||||||| |||||| ||||||||||||||||||||  ||||  | || |||||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  4726 ctccaagttaagcacacttaactgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaa 4627  T
Q  321 gtcttccttcaaccatgttgtcccatacctgca 353  Q
      |||||||||||||||  ||||||||||||||    
T  4626 accttccttcaaccatgcagtcccatacctgca 4594  T

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Target: scaffold0333; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 5186 - 5049
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatgt-cgactgaaaagaagatgcatcttattgatataggcagtaccaaacaat-----tct 315  Q
    |||||||| |||||||||||||||||||||||||||| ||||  | || |||||||||||||||||| || ||||||| |||||||||||||     |||    
T  5186 ctccaagttaagcacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttctct 5087  T
Q  316 tataagtcttccttcaaccatgttgtcccatacctgca 353  Q
    | |||  |||||||||||||||  ||||||||||||||    
T  5086 tttaaaccttccttcaaccatgcagtcccatacctgca 5049  T

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Target: scaffold0088 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 391
Target Start/End: Complemental strand, 23785 - 23668
Alignment:
Q  274 agaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctttca 373  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||||||||| | ||||  | |||| |||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctca 23686  T
Q  374 tttcaatgtgatttggtt 391  Q
    ||||  ||||||| ||||    
T  23685 tttcggtgtgattcggtt 23668  T

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Target: scaffold0007 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 142305 - 142420
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctcataatccctt 370  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||   ||||||||||||||  ||||||||||||||| | ||||  ||||||     
T  142305 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctc 142404  T
Q  371 tcatttcaatgtgatt 386  Q
    ||||| | ||||||||    
T  142405 tcattccgatgtgatt 142420  T

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Target: scaffold0664 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 271 - 354
Target Start/End: Original strand, 4013 - 4096
Alignment:
Q  271 aaaagaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcac 354  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||||||  |||||||||| |||  |||||||||||||||    
T  4013 aaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacctgcac 4096  T

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Target: scaffold0391 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 333
Target Start/End: Complemental strand, 14907 - 14794
Alignment:
Q  221 actccaagtcaagcacgcttaactgtggagttcttatggaatgtcg-actgaaaagaagatgcatcttattgatataggcagtaccaaacaattcttata 319  Q
    |||||||||||| || ||||||||||| |||||||||  ||||    || ||||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  14907 actccaagtcaaacatgcttaactgtgaagttcttattcaatgaattaccgaaaagacgatgcatcttattgatataggtattaccaaacaattcttata 14808  T
Q  320 agtcttccttcaac 333  Q
    ||  ||||||||||    
T  14807 agcattccttcaac 14794  T

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Target: scaffold0389 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 13518 - 13591
Alignment:
Q  226 aagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttattgatatagg 298  Q
    ||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||| ||||||||||    
T  13518 aagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagg 13591  T

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Target: scaffold0277 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 14683 - 14752
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatggaatg-tcgactgaaaagaagatgcatcttatt 290  Q
    ||||||||||||||||||||||||||||||||||||||||||  | || ||||| |||||||||||||||    
T  14683 ctccaagtcaagcacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatcttatt 14752  T

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Target: scaffold0101 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 45497 - 45411
Alignment:
Q  275 gaagatgcatcttattgatataggcagtaccaaacaattcttataagtcttccttcaaccatgttgtcccatacctgcacagtctca 361  Q
    |||||| |||||| |||||||||| ||||||||| |||||| ||||||||||||||||| |||| ||| ||||  ||||| ||||||    
T  45497 gaagatacatcttgttgatataggtagtaccaaataattctcataagtcttccttcaacaatgtagtcacatatatgcacggtctca 45411  T

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Target: scaffold0137 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 7107 - 7070
Alignment:
Q  222 ctccaagtcaagcacgcttaactgtggagttcttatgg 259  Q
    |||||||||||||| |||||||||||||||||||||||    
T  7107 ctccaagtcaagcatgcttaactgtggagttcttatgg 7070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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