View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21211_high_2 (Length: 418)

Name: NF21211_high_2
Description: NF21211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21211_high_2
NF21211_high_2
[»] chr5 (37 HSPs)
chr5 (39-404)||(38816574-38816932)
chr5 (174-249)||(19820428-19820503)
chr5 (200-329)||(22423764-22423895)
chr5 (174-241)||(22013364-22013431)
chr5 (174-248)||(42469171-42469245)
chr5 (199-248)||(15410483-15410532)
chr5 (196-248)||(6326332-6326384)
chr5 (172-297)||(37328829-37328955)
chr5 (213-297)||(3966492-3966577)
chr5 (189-247)||(15382442-15382500)
chr5 (213-246)||(6035472-6035505)
chr5 (282-331)||(8420075-8420124)
chr5 (196-249)||(21191090-21191143)
chr5 (174-241)||(2436878-2436939)
chr5 (277-329)||(9929668-9929720)
chr5 (213-249)||(17123037-17123073)
chr5 (196-240)||(21522722-21522766)
chr5 (196-240)||(21533288-21533332)
chr5 (213-249)||(27144452-27144488)
chr5 (174-249)||(6247572-6247647)
chr5 (213-297)||(11685928-11686012)
chr5 (206-249)||(14674251-14674294)
chr5 (206-249)||(19579683-19579726)
chr5 (189-248)||(21137654-21137713)
chr5 (206-249)||(34879332-34879375)
chr5 (206-248)||(5873548-5873590)
chr5 (301-331)||(24906250-24906280)
chr5 (218-248)||(27932229-27932259)
chr5 (215-249)||(28588708-28588742)
chr5 (352-390)||(35665559-35665597)
chr5 (196-242)||(36642803-36642849)
chr5 (200-249)||(19552577-19552626)
chr5 (174-247)||(30135264-30135336)
chr5 (222-251)||(32766975-32767004)
chr5 (189-249)||(13287433-13287493)
chr5 (213-249)||(31084312-31084348)
chr5 (213-297)||(41995460-41995543)
[»] chr7 (38 HSPs)
chr7 (174-248)||(27944991-27945065)
chr7 (174-248)||(24105629-24105702)
chr7 (217-299)||(29787354-29787435)
chr7 (196-249)||(11722132-11722185)
chr7 (187-297)||(24339605-24339716)
chr7 (199-280)||(19206025-19206107)
chr7 (213-297)||(32308109-32308194)
chr7 (219-329)||(11700798-11700909)
chr7 (189-249)||(1433419-1433479)
chr7 (169-329)||(7328639-7328805)
chr7 (174-245)||(2034392-2034462)
chr7 (198-249)||(2425767-2425818)
chr7 (174-249)||(43027503-43027578)
chr7 (189-248)||(43249958-43250017)
chr7 (207-249)||(8046061-8046103)
chr7 (213-280)||(22484014-22484082)
chr7 (207-249)||(23191879-23191921)
chr7 (199-249)||(26733279-26733329)
chr7 (218-292)||(30731031-30731104)
chr7 (216-289)||(11072290-11072362)
chr7 (198-247)||(49107795-49107844)
chr7 (213-249)||(20549780-20549816)
chr7 (210-249)||(2948669-2948708)
chr7 (213-297)||(6630897-6630982)
chr7 (206-249)||(21828439-21828482)
chr7 (217-248)||(28155563-28155594)
chr7 (175-249)||(598160-598233)
chr7 (198-248)||(5235960-5236010)
chr7 (231-297)||(9933282-9933347)
chr7 (207-249)||(20545270-20545312)
chr7 (189-247)||(26329418-26329476)
chr7 (198-247)||(4017830-4017879)
chr7 (301-330)||(17852091-17852120)
chr7 (213-246)||(25791642-25791675)
chr7 (197-249)||(11061110-11061162)
chr7 (301-329)||(15680900-15680928)
chr7 (189-249)||(17851396-17851456)
chr7 (213-249)||(22868031-22868067)
[»] chr6 (45 HSPs)
chr6 (196-297)||(10294079-10294181)
chr6 (189-249)||(9027143-9027203)
chr6 (174-249)||(853893-853968)
chr6 (189-297)||(16766662-16766771)
chr6 (189-249)||(5000660-5000720)
chr6 (189-329)||(5732474-5732604)
chr6 (174-242)||(8365560-8365628)
chr6 (176-248)||(12696277-12696348)
chr6 (199-329)||(8805524-8805656)
chr6 (189-297)||(9107355-9107464)
chr6 (198-249)||(9629357-9629408)
chr6 (174-249)||(30866178-30866253)
chr6 (174-248)||(6389693-6389767)
chr6 (199-249)||(9658854-9658904)
chr6 (211-249)||(19040339-19040377)
chr6 (174-242)||(3398569-3398637)
chr6 (189-249)||(7938081-7938141)
chr6 (200-248)||(13851712-13851760)
chr6 (189-248)||(7977865-7977924)
chr6 (206-249)||(20371144-20371187)
chr6 (189-292)||(34073337-34073441)
chr6 (196-249)||(426548-426601)
chr6 (208-249)||(7265627-7265668)
chr6 (197-249)||(8777007-8777059)
chr6 (189-249)||(34595099-34595159)
chr6 (282-329)||(426478-426525)
chr6 (206-249)||(17841623-17841666)
chr6 (197-280)||(31579229-31579311)
chr6 (174-248)||(25038106-25038180)
chr6 (175-249)||(31959111-31959184)
chr6 (301-331)||(34073276-34073306)
chr6 (288-329)||(2117134-2117175)
chr6 (216-249)||(10842524-10842557)
chr6 (199-293)||(26562664-26562759)
chr6 (213-249)||(677826-677862)
chr6 (174-247)||(4877890-4877965)
chr6 (173-249)||(7930254-7930330)
chr6 (213-249)||(7996412-7996448)
chr6 (213-249)||(8022353-8022389)
chr6 (213-249)||(10339160-10339196)
chr6 (197-249)||(16833281-16833333)
chr6 (213-249)||(17341698-17341734)
chr6 (216-248)||(21395342-21395374)
chr6 (213-249)||(21424836-21424872)
chr6 (213-297)||(34290064-34290147)
[»] chr8 (22 HSPs)
chr8 (196-297)||(22651948-22652050)
chr8 (191-297)||(29510289-29510396)
chr8 (174-242)||(25192388-25192456)
chr8 (183-249)||(926822-926888)
chr8 (196-249)||(27213519-27213572)
chr8 (174-242)||(126390-126457)
chr8 (174-249)||(13436998-13437073)
chr8 (206-249)||(31109552-31109595)
chr8 (187-249)||(24362236-24362298)
chr8 (216-249)||(39954313-39954346)
chr8 (209-249)||(31236611-31236651)
chr8 (206-282)||(37283812-37283887)
chr8 (174-249)||(4298920-4298994)
chr8 (174-249)||(11944615-11944690)
chr8 (187-249)||(4673459-4673521)
chr8 (215-249)||(27101506-27101540)
chr8 (207-249)||(34897068-34897110)
chr8 (174-292)||(11927076-11927195)
chr8 (216-249)||(13844630-13844663)
chr8 (189-249)||(2572090-2572150)
chr8 (197-249)||(20873042-20873094)
chr8 (201-297)||(29776013-29776108)
[»] chr2 (34 HSPs)
chr2 (174-285)||(21782817-21782927)
chr2 (174-238)||(33519736-33519800)
chr2 (174-249)||(20539708-20539783)
chr2 (189-280)||(4332891-4332981)
chr2 (199-249)||(21616737-21616787)
chr2 (174-247)||(19536434-19536507)
chr2 (173-246)||(23717976-23718048)
chr2 (173-246)||(24105648-24105720)
chr2 (222-280)||(1327976-1328033)
chr2 (199-297)||(36409614-36409711)
chr2 (189-274)||(18276486-18276570)
chr2 (175-240)||(21624217-21624282)
chr2 (216-329)||(19573970-19574078)
chr2 (224-297)||(44860320-44860394)
chr2 (211-299)||(18420417-18420506)
chr2 (282-329)||(19536361-19536408)
chr2 (214-249)||(37411278-37411313)
chr2 (175-249)||(38117193-38117261)
chr2 (173-247)||(14996260-14996333)
chr2 (282-328)||(18255945-18255991)
chr2 (173-248)||(21374734-21374810)
chr2 (189-279)||(28412315-28412404)
chr2 (191-249)||(31018557-31018615)
chr2 (282-328)||(34691770-34691816)
chr2 (282-328)||(34714182-34714228)
chr2 (173-294)||(2331743-2331863)
chr2 (187-248)||(4142875-4142936)
chr2 (207-248)||(21091706-21091747)
chr2 (213-249)||(896200-896236)
chr2 (200-248)||(10535794-10535842)
chr2 (197-249)||(30404884-30404936)
chr2 (217-249)||(31284041-31284073)
chr2 (293-329)||(42511322-42511358)
chr2 (216-248)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (173-249)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (174-329)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (173-249)||(21902-21978)
[»] chr1 (38 HSPs)
chr1 (197-249)||(6427323-6427375)
chr1 (189-249)||(40917716-40917776)
chr1 (190-249)||(398799-398858)
chr1 (197-249)||(2896155-2896207)
chr1 (182-328)||(10572535-10572690)
chr1 (173-248)||(5376535-5376609)
chr1 (174-249)||(5927374-5927449)
chr1 (276-329)||(48547938-48547991)
chr1 (205-249)||(12443494-12443538)
chr1 (213-249)||(17831565-17831601)
chr1 (213-249)||(36878450-36878486)
chr1 (196-288)||(1486703-1486796)
chr1 (189-289)||(38503285-38503386)
chr1 (228-331)||(44482234-44482343)
chr1 (187-242)||(48040503-48040558)
chr1 (196-274)||(1262856-1262933)
chr1 (199-249)||(9709795-9709845)
chr1 (199-249)||(34298411-34298461)
chr1 (174-248)||(39130802-39130876)
chr1 (213-249)||(19562655-19562691)
chr1 (213-248)||(609493-609528)
chr1 (206-249)||(6415035-6415078)
chr1 (174-249)||(31014993-31015068)
chr1 (206-249)||(46348417-46348460)
chr1 (197-248)||(48450622-48450673)
chr1 (213-247)||(3490426-3490460)
chr1 (215-249)||(10475011-10475045)
chr1 (183-249)||(15641064-15641130)
chr1 (213-251)||(40285686-40285724)
chr1 (196-249)||(20157384-20157437)
chr1 (216-249)||(21530681-21530714)
chr1 (219-297)||(25361881-25361960)
chr1 (219-248)||(41877505-41877534)
chr1 (216-297)||(9828036-9828118)
chr1 (189-249)||(10577769-10577829)
chr1 (206-242)||(18556497-18556533)
chr1 (216-280)||(25452152-25452215)
chr1 (174-234)||(34315663-34315722)
[»] chr3 (38 HSPs)
chr3 (174-249)||(8383207-8383282)
chr3 (187-286)||(5441029-5441128)
chr3 (210-299)||(8039818-8039908)
chr3 (189-248)||(24205076-24205135)
chr3 (174-240)||(8842280-8842346)
chr3 (205-270)||(5407261-5407325)
chr3 (189-249)||(28917966-28918026)
chr3 (189-248)||(4991002-4991061)
chr3 (183-242)||(10335327-10335386)
chr3 (174-297)||(25064859-25064981)
chr3 (174-249)||(55401025-55401100)
chr3 (175-249)||(8587055-8587129)
chr3 (198-248)||(9800014-9800064)
chr3 (175-249)||(32429414-32429488)
chr3 (197-249)||(2620087-2620139)
chr3 (189-249)||(15796328-15796388)
chr3 (197-249)||(26492239-26492291)
chr3 (206-245)||(21720746-21720785)
chr3 (293-331)||(4466538-4466576)
chr3 (301-331)||(5440965-5440995)
chr3 (199-249)||(12674535-12674585)
chr3 (293-331)||(13807237-13807275)
chr3 (173-247)||(14223889-14223962)
chr3 (206-247)||(3865592-3865633)
chr3 (206-247)||(12703989-12704030)
chr3 (217-270)||(34307794-34307846)
chr3 (189-249)||(3164059-3164119)
chr3 (213-249)||(4987325-4987361)
chr3 (213-249)||(6525714-6525750)
chr3 (206-242)||(10318075-10318111)
chr3 (175-247)||(14618732-14618804)
chr3 (205-249)||(14832080-14832124)
chr3 (213-249)||(21479107-21479143)
chr3 (216-248)||(25074781-25074813)
chr3 (213-249)||(26290360-26290396)
chr3 (197-249)||(26508083-26508135)
chr3 (293-329)||(27505334-27505370)
chr3 (213-249)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (183-329)||(21002-21149)
scaffold0168 (268-329)||(21217-21278)
scaffold0168 (268-329)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (189-249)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (189-248)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (189-297)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (207-248)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (214-299)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (177-249)||(178853-178925)
scaffold0018 (207-248)||(192284-192325)
[»] chr4 (21 HSPs)
chr4 (189-249)||(23293020-23293080)
chr4 (213-248)||(35723420-35723455)
chr4 (213-247)||(17345451-17345485)
chr4 (191-248)||(847918-847975)
chr4 (196-249)||(36635296-36635349)
chr4 (189-248)||(24343472-24343531)
chr4 (191-297)||(30982863-30982967)
chr4 (206-248)||(7012048-7012090)
chr4 (168-249)||(7670625-7670709)
chr4 (199-249)||(20521883-20521933)
chr4 (189-247)||(20633450-20633508)
chr4 (206-329)||(30298928-30299048)
chr4 (206-329)||(30327796-30327916)
chr4 (215-249)||(40613441-40613475)
chr4 (178-247)||(28084475-28084544)
chr4 (217-249)||(1747205-1747237)
chr4 (174-249)||(5775392-5775469)
chr4 (206-249)||(16184801-16184842)
chr4 (285-329)||(18844423-18844467)
chr4 (293-329)||(28470448-28470484)
chr4 (174-242)||(28720827-28720894)
[»] scaffold0652 (1 HSPs)
scaffold0652 (189-249)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (174-250)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (189-248)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (206-249)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (216-249)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (204-286)||(28830-28913)
[»] scaffold0450 (1 HSPs)
scaffold0450 (301-329)||(8564-8592)
[»] scaffold0027 (2 HSPs)
scaffold0027 (197-249)||(46655-46707)
scaffold0027 (283-331)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 39 - 404
Target Start/End: Complemental strand, 38816932 - 38816574
Alignment:
Q  39 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataat 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38816932 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataat 38816833  T
Q  139 ttgagaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||||    
T  38816832 ttgagaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactccg-------cacggatactgacacgccgacaccgctaataat 38816740  T
Q  239 ttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcg 338  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38816739 ttgagaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcg 38816640  T
Q  339 tgaatcgtgatagtgttggagactgacatctgttggacactggacacacctttaatatgaagtctc 404  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38816639 tgaatcgtgatagtgttggagactgacatctgttggacactgcacacacctttaatatgaagtctc 38816574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 200 - 329
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
Q  200 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 296  Q
    ||||| ||||||||||||||| | |||||  ||||||||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
Q  297 atggctaattcgaggagtgtccgtgcttcatag 329  Q
    | | ||||| |||||||||||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttg 241  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||    
T  22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||||| | |||||| ||| ||||| |||||||| |||||||||||||| | |||||||||||||||||    
T  42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 6326384 - 6326332
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  6326384 ccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 37328955 - 37328829
Alignment:
Q  172 tactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--a 269  Q
    |||||||||||||| | |||||| ||| ||||| |||||| ||||| || ||||||| || |||||||||  |||||| | | | |||| | |||||  |    
T  37328955 tactatgaagcacggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcac-aaaattcagtgtaattaca 37328857  T
Q  270 tgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||||||| ||||||||||||||||    
T  37328856 tgtgtcggtgtcgtgtcggtgtcggaca 37328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 3966492 - 3966577
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||| ||||||||||||||||||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
T  3966492 actgacatgccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 15382442 - 15382500
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||    
T  15382442 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaa 246  Q
    ||||||||||||||||||||||||||||||||||    
T  6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  282 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 331  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 21191143 - 21191090
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| |||||| ||||||| |||||||| ||||||||||||| ||||||    
T  21191143 ccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatc 21191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 2436878 - 2436939
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttg 241  Q
    |||||||||||| |||||||| ||||||||| |||      |||||||||||||||||||||||||||    
T  2436878 ctatgaagcacggatacggacaccggacacgacac------tgacacgccgacaccgctaataatttg 2436939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
Q  277 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataattt 240  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataattt 240  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 27144452 - 27144488
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27144452 actgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 6247572 - 6247647
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||| |||| || ||||| |||||||||  ||| | ||||||||||||||||  |||||||||||| ||||||    
T  6247572 ctatgaaacacggatgcggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatc 6247647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 11685928 - 11686012
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| || | | ||||  ||||||||||||| || |||||||||||||    
T  11685928 actgacatgccgacaccgctaataatttgagaaagtcgc-ataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggaca 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 14674251 - 14674294
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  14674251 cacggacactgacacgccgacacagctaataatttgaaaaaatc 14674294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 19579683 - 19579726
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||    
T  19579683 cacggacactgatacgccgacacagctaataatttgagaaaatc 19579726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 21137654 - 21137713
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||||||||  |||||| ||||||||||||||| || ||||||| |||||||||    
T  21137654 acggacaccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaat 21137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 34879332 - 34879375
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  34879332 cacggatacggacacgccggcaccgctaaaaatttgagaaaatc 34879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 5873590 - 5873548
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||    
T  5873590 cacggacactgacatgccgacacctctaataatttgagaaaat 5873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 331
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  301 ctaattcgaggagtgtccgtgcttcatagtt 331  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 27932229 - 27932259
Alignment:
Q  218 cacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||||||||||||||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaat 27932259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 28588742 - 28588708
Alignment:
Q  215 tgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| ||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatc 28588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 390
Target Start/End: Complemental strand, 35665597 - 35665559
Alignment:
Q  352 tgttggagactgacatctgttggacactggacacacctt 390  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  35665597 tgttggaaactgacatgtgttggacactggacacacctt 35665559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 36642849 - 36642803
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  36642849 ccggacacgacacggacactgacacgccgacacagttaataatttga 36642803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 19552626 - 19552577
Alignment:
Q  200 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 19552577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 30135264 - 30135336
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||||||||  |||||||| | ||||||| ||| ||||| |||||||||||||  |||||||||||| ||||    
T  30135264 ctatgaagcacatatacggacac-ggacacgacacagataccgacacgccgacacaactaataatttgaaaaaa 30135336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Complemental strand, 32767004 - 32766975
Alignment:
Q  222 ccgacaccgctaataatttgagaaaatcgc 251  Q
    ||||||||||||||||||||||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgc 32766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 13287493 - 13287433
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| ||| ||||| |||||| | ||||||||||| ||||||    
T  13287493 acggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatc 13287433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 31084312 - 31084348
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  31084312 actgacacgccgacacagctaataatttgaaaaaatc 31084348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 41995460 - 41995543
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||||||||||||  ||||||||| || |||||| | ||| |||| | |||||| |||||||||  || |||||||||||||    
T  41995460 actgacacgccgacacaactaataattcgaaaaaatcac-ataattcaatgtaattaagtgtcggtgccgtatcggtgtcggaca 41995543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||||| ||||||| | |||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  24105629 ctatgaagcacggatacgga-tacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 29787435 - 29787354
Alignment:
Q  217 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 299  Q
    ||||||||||||||||||||||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 11722185 - 11722132
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  11722185 ccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 297
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
Q  187 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 284  Q
    |||||||| ||||||||| || ||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
T  24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
Q  285 tcggtgtcggaca 297  Q
    |||||||||||||    
T  24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 19206025 - 19206107
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 280  Q
    |||||| |||||| ||  ||||||||||||||||||||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  19206025 gacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 329
Target Start/End: Original strand, 11700798 - 11700909
Alignment:
Q  219 acgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgt 316  Q
    |||| ||||||| ||||||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| ||||||||||    
T  11700798 acgctgacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgt 11700896  T
Q  317 ccgtgcttcatag 329  Q
    || || |||||||    
T  11700897 ccctgattcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 1433419 - 1433479
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||| ||||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  1433419 acggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 329
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
Q  169 atatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat- 267  Q
    ||||||||||||||||| |||||||| ||| ||||| ||| || | | ||||| ||| || |||||||||||||||||||  | ||| || | | ||||     
T  7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
Q  268 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
T  7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaa 245  Q
    |||||||||||| ||||||| | | |||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  2034392 ctatgaagcacggatacgga-tactgacacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
Q  198 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||| || ||||| | ||||||| |||||| ||||||||| |||| | ||||||||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 43249958 - 43250017
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||||||| | |||||| |||||||||||||||| | |||||||||||||||||    
T  43249958 acggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
Q  207 acggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 22484014 - 22484082
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 280  Q
    |||||||||||||||||||||||||||| ||||||| || ||| |||| ||||||  |||||||||||||    
T  22484014 actgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
Q  207 acggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  218 cacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtc 292  Q
    |||||||||||||| ||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttggtgtc 30731104  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 11072290 - 11072362
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 289  Q
    ||||||||||||||| ||||||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
T  11072290 gacacgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
Q  198 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    ||||||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 2948669 - 2948708
Alignment:
Q  210 gatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  2948669 gatactgacacgccgacaccgctgataattttagaaaatc 2948708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 6630982 - 6630897
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||||||||||||| |||||||||||||||| || || || |||| | ||||  ||||||||| ||| |||| |||||||||||    
T  6630982 actgacacgccgacaccactaataatttgagaaagtcact-taattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggaca 6630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 21828482 - 21828439
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||||||||||||||| || |||||||||||||||    
T  21828482 cacggacactgacacgccgacaccgttagtaatttgagaaaatc 21828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 28155563 - 28155594
Alignment:
Q  217 acacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||||||||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaat 28155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 598160 - 598233
Alignment:
Q  175 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||  |||||| || |||| | |||||| ||||||||  |||||||||||||||||| ||||||||    
T  598160 tatgaagcacgac-acggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatc 598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 5235960 - 5236010
Alignment:
Q  198 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||| ||| || ||||||||| |||||||||||||||||| |||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaat 5236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 9933282 - 9933347
Alignment:
Q  231 ctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    |||||||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||||||||    
T  9933282 ctaataatttgaaaaaatcac-atatttcagtaaacttatgtgtcagtgtcgtgtcggtgtcggaca 9933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 20545312 - 20545270
Alignment:
Q  207 acggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  20545312 acggatacggacacgccaacaccgctaataatttgaaaaaatc 20545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 26329476 - 26329418
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||| | ||||||| ||| || ||||||||||||||| || ||||||||||||||||    
T  26329476 acggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaa 26329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 4017879 - 4017830
Alignment:
Q  198 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    ||||||| |||||| || ||||||||||||| | ||||||||||||||||    
T  4017879 ggacacgacacggacaccgacacgccgacacggataataatttgagaaaa 4017830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  301 ctaattcgaggagtgtccgtgcttcatagt 330  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 25791642 - 25791675
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaa 246  Q
    ||||||||||||||||||||||| ||||||||||    
T  25791642 actgacacgccgacaccgctaattatttgagaaa 25791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 11061162 - 11061110
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||| ||| |||||| |||||||| ||||||| ||||||||||||| ||||||    
T  11061162 cggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatc 11061110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 329
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
Q  301 ctaattcgaggagtgtccgtgcttcatag 329  Q
    |||||||||||||||||||||||||||||    
T  15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 17851396 - 17851456
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| || |||||| |||||  ||| |||||||||||||| ||||||||    
T  17851396 acggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatc 17851456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 22868031 - 22868067
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  22868031 actgacacgccgacaccactaataatatgagaaaatc 22868067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 293  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
T  10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
Q  294 gaca 297  Q
    ||||    
T  10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||| |||| |||||||| ||||||||| ||||||| |||||||||||||||  |||||||||||| ||||||    
T  853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 16766662 - 16766771
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 286  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||||    
T  16766662 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T
Q  287 ggtgtcggaca 297  Q
    |||||||||||    
T  16766761 ggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 5000720 - 5000660
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||| | |||||||||||||||| ||||||||||||||||| |||||||||    
T  5000720 acggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 329
Target Start/End: Complemental strand, 5732604 - 5732474
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 288  Q
    |||||| | ||||||| || ||| |||||||||||||||||| |||||||||||||||||| | |||||| | | ||||||| |         |||||||    
T  5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcgg 5732515  T
Q  289 tgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||||||| | ||||| |||||||||||| ||||||||||    
T  5732514 tgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||||||||| |||||||| || |||||| |||||| ||||||||||||||||  ||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
Q  176 atgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||| |||||||| | ||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 329
Target Start/End: Complemental strand, 8805656 - 8805524
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt---gtcgga 295  Q
    |||||| ||| || || |||||| || ||| |||||||||||||||||||| | ||| || | | ||||||||||||||||| ||||| |    || |||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcac-ataatttagtgtaattatgtgtcggtgtagtgtcagacacgtggga 8805558  T
Q  296 catggctaattcgaggagtgtccgtgcttcatag 329  Q
    |||| ||||| |||||||||||||||||||||||    
T  8805557 catgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 297
Target Start/End: Complemental strand, 9107464 - 9107355
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 286  Q
    |||||| ||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||| | | | |||| | |||||  | |||||||||| |||||    
T  9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T
Q  287 ggtgtcggaca 297  Q
    |||||||||||    
T  9107365 ggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
Q  198 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| |||||||||||| ||||||| | ||| || || ||||| || |||||||||||||||||||||||||    
T  30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||||| | || ||| ||||||||| |||||| ||| |||||||||||| | |||||||||||||||||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
Q  211 atactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||||||| | ||||||||  || ||||| |||||| |||||||||||||||| |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 7938081 - 7938141
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||||||    
T  7938081 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  200 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 7977924 - 7977865
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| | ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 20371187 - 20371144
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  20371187 cacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 34073441 - 34073337
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 286  Q
    |||||| | ||||||| |||||| ||||||| ||| ||| ||||||||||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||    
T  34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T
Q  287 ggtgtc 292  Q
    ||||||    
T  34073342 ggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 426601 - 426548
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  426601 ccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
Q  208 cggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 34595099 - 34595159
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||||    
T  34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  282 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 17841666 - 17841623
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  17841666 cacggacactgacacgccgacacagctaataatttgaaaaaatc 17841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 31579311 - 31579229
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 280  Q
    |||||||| || ||| |||| ||| || |||||| |||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  31579311 cggacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcac-ataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 25038180 - 25038106
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||||| ||||||||   | | ||| ||| ||||||||||||  ||||||| |||||||||||||||||    
T  25038180 ctatgaagcacggatacggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaat 25038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 31959111 - 31959184
Alignment:
Q  175 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||| |||||||| | ||||| | |||| | |||||||||||| ||| ||||||||||||| ||||||    
T  31959111 tatgaagcacggatacggacac-ggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatc 31959184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 331
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  301 ctaattcgaggagtgtccgtgcttcatagtt 331  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 2117134 - 2117175
Alignment:
Q  288 gtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  2117134 gtgtcggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 10842524 - 10842557
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||||||||||||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatc 10842557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 26562664 - 26562759
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 293  Q
    ||||| ||||| | || ||||||||||||| ||||| |||||||||||||| | ||| |||| | ||||  ||||||||| ||| ||||||||||||    
T  26562664 gacaccgcacgaacacggacacgccgacactgctaaaaatttgagaaaatcac-ataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 677826 - 677862
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| | ||||||||||||||||||    
T  677826 actgacacgccgacactgttaataatttgagaaaatc 677862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 4877890 - 4877965
Alignment:
Q  174 ctatgaagcacgaatacggactc--cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||||||||  |||||||| |  || ||||| |||||||| |||||| ||||||| ||||||||||||| ||||    
T  4877890 ctatgaagcacagatacggacacgccgaacacgacacggatagtgacacaccgacacagctaataatttgaaaaaa 4877965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 7930254 - 7930330
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||| | |||| ||| |||||||| | ||||| ||||||| ||||||||   ||||||||||| ||||||    
T  7930254 actatgaagcatggatacagacaccggacacagaacggacactgacatgccgacacaattaataatttgaaaaaatc 7930330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 7996448 - 7996412
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  7996448 actgacatgccgacactgctaataatttgagaaaatc 7996412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 8022353 - 8022389
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  8022353 actgacatgccgacactgctaataatttgagaaaatc 8022389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 10339196 - 10339160
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||||| | |||||||||||||||    
T  10339196 actgacacgccgacaccgcgattaatttgagaaaatc 10339160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 16833281 - 16833333
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| ||| || ||||||||||||||||  |||||||||||| ||||||    
T  16833281 cggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatc 16833333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 17341734 - 17341698
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  17341734 actgacacgccgacaccgttaataatttgataaaatc 17341698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 21395374 - 21395342
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||| ||||||||||||||||||||||||    
T  21395374 gacacgccaacaccgctaataatttgagaaaat 21395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 21424872 - 21424836
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  21424872 actgacacgccaacaccgctaataatttgaaaaaatc 21424836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 34290147 - 34290064
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||| ||||||||  ||||||||||| || |||| | ||| |||| | ||||||||||||||||| ||||| ||||| ||||    
T  34290147 actgacatgccgacacaactaataatttgcgagaatcac-ataattcagtgtaattatgtgtcggtgtcgtgtcagtgtccgaca 34290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 293  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
T  22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
Q  294 gaca 297  Q
    ||||    
T  22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 29510396 - 29510289
Alignment:
Q  191 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 288  Q
    |||| ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | | | |||| |||||||  | |||||||||| |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T
Q  289 tgtcggaca 297  Q
    |||||||||    
T  29510297 tgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||||||||||||||||||  ||||||||  ||||| |||||||||||||||| |||||||||||||    
T  25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
Q  183 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||| |||||| ||||||||| |||||| ||||||||||| ||||  |||||||||||||||||||    
T  926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 126457 - 126390
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||||||||| ||||| || | |||||||  ||||||||||||||||| ||||||||||||||||||    
T  126457 ctatgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||| | | |||| ||||||| | || ||| |||||||||||||||| ||||||||||||| ||||||    
T  13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 31109595 - 31109552
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  31109595 cacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
Q  187 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| ||||| ||| ||| || || ||||||||||||||||||||||||||||| ||||    
T  24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 39954346 - 39954313
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||||||||||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 31236651 - 31236611
Alignment:
Q  209 ggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  31236651 ggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 37283887 - 37283812
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 282  Q
    |||||| ||||||| || | ||||||||||||| |||||||||| | ||| |||| | |||||||||||||||||||    
T  37283887 cacggacactgacatgcgggcaccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 4298994 - 4298920
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||| ||| |||| | ||||||| ||| |||||| |||||||||||| | ||||||||||| ||||||    
T  4298994 ctatgaagcacggatatggacac-ggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatc 4298920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 11944615 - 11944690
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||  |||||||| ||  ||||| ||||||| || |||||||||||| | ||||||||||| ||||||    
T  11944615 ctatgaagcacagatacggacaccaaacacgacacggatgctaacacgccgacactgttaataatttgataaaatc 11944690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 4673521 - 4673459
Alignment:
Q  187 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||  |||||||| ||| || |||||||||||||||| | ||||||||||| ||||||    
T  4673521 atacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatc 4673459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 27101506 - 27101540
Alignment:
Q  215 tgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||||||||||||||| ||||||    
T  27101506 tgacacgccgacaccgctaataatttgaaaaaatc 27101540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 34897068 - 34897110
Alignment:
Q  207 acggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatc 34897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 292
Target Start/End: Complemental strand, 11927195 - 11927076
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatg 271  Q
    |||||||||||  |||||||| ||  ||||| ||||||| || | |||||||||| | ||||||||||| |||||| | ||| |||| | ||||  ||||    
T  11927195 ctatgaagcacagatacggacaccaaacacgacacggatgctaatacgccgacactgttaataatttgataaaatcac-ataattcagtgtaattatatg 11927097  T
Q  272 tgtcggtgtggtgtcggtgtc 292  Q
    ||||||||| |||| ||||||    
T  11927096 tgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 13844663 - 13844630
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||| ||||||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatc 13844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 2572150 - 2572090
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| | ||||||| ||||||||| |||||| ||||||  |||||||||||| ||||||    
T  2572150 acggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatc 2572090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 20873042 - 20873094
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| |||||| |||||||||||||||  | ||||||||||| ||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatc 20873094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 29776013 - 29776108
Alignment:
Q  201 cacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    |||| |||||| | ||||| | |||||| |||||||||||||||||||| |  || |||| ||||||||| |||||||||   ||| ||||||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatcac-gtaattcagtataattatatgtcggtgttaagtcagtgtcggaca 29776108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 273  Q
    ||||||||||||||||| ||| | ||||||| |||  | |||||||||||||||| |||||||||||||||||||| | ||| |||| | ||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
Q  274 tcggtgtggtgt 285  Q
     |||||| ||||    
T  21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 33519736 - 33519800
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataat 238  Q
    |||||||||||| |||||||| ||||||||| | ||||||||||||| |||||||||||||||||    
T  33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||| |||||||| | ||||||| |||||| ||||||||| |||||| ||||||||||||| ||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 280
Target Start/End: Original strand, 4332891 - 4332981
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 280  Q
    |||||| ||||||||||||| |||||| ||| |||||||| | |||||||||| ||||||| | ||| |||| | |||||||||||||||||    
T  4332891 acggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||||||||  |||||||| ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 23717976 - 23718048
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 246  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  23717976 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 24105648 - 24105720
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 246  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  24105648 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 1327976 - 1328033
Alignment:
Q  222 ccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 280  Q
    ||||||||||||||||||||||||||||  || | |||| |||||||||||||||||||    
T  1327976 ccgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 18276486 - 18276570
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 274  Q
    |||||| |||||||||  || || ||||| | ||||||||||||||||||||||||||||| || || |||| | |||||||||||    
T  18276486 acggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
Q  175 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataattt 240  Q
    |||||||| || |||||||| ||| ||||| ||| || |||||||||||||||| |||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 329
Target Start/End: Original strand, 19573970 - 19574078
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtg 315  Q
    ||||||||||||||| ||||||||| |||||||  | ||| |||| | |||||||     ||||  ||||||||||||||||   |||||||||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataac-ataattcagtgtaattata----ggtggcgtgtcggtgtcggacacacctaattcgaggagtg 19574064  T
Q  316 tccgtgcttcatag 329  Q
    ||| ||||||||||    
T  19574065 tccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
Q  224 gacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 18420506 - 18420417
Alignment:
Q  211 atactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 299  Q
    ||||||||||||| |||| |||||||||||||||||||| | ||| |||| |  ||||||  |||||||||| |||||  |||||||||||    
T  18420506 atactgacacgccaacactgctaataatttgagaaaatcac-ataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatg 18420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  282 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 249
Target Start/End: Complemental strand, 37411313 - 37411278
Alignment:
Q  214 ctgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||||||||||||||||||||||||||    
T  37411313 ctgacatgccgacaccgctaataatttgagaaaatc 37411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 38117261 - 38117193
Alignment:
Q  175 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||| |||||||| ||||||||| |||      |||||||||||||| ||||||||||||| ||||||    
T  38117261 tatgaagcacggatacggacaccggacacgacac------tgacacgccgacacagctaataatttgaaaaaatc 38117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 14996333 - 14996260
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    ||||||||||||| |||||||| | | ||| | |||||| ||||||| |||||||| ||||||||||||| ||||    
T  14996333 actatgaagcacggatacggacgcag-acatgacacggacactgacaagccgacacagctaataatttgaaaaaa 14996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  282 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 328  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 21374810 - 21374734
Alignment:
Q  173 actatgaagcacgaatacggactccggacacgg--cacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||||||||| |||||||| | |||||| |  |||||| ||| |||||||||||| ||||||||||||| |||||    
T  21374810 actatgaagcacggatacggacac-ggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaat 21374734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 28412315 - 28412404
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtg 279  Q
    |||||| || |||||| |||||| ||| ||||| | |||||| ||||||||||| |||||| | ||| |||| | ||||||||||||||||    
T  28412315 acggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcac-ataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 31018557 - 31018615
Alignment:
Q  191 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||| ||||| ||| || ||| ||||||||||| |||||||||||||||| ||||||||    
T  31018557 ggacaccggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatc 31018615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  282 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 328  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  282 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 328  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 2331743 - 2331863
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgt 272  Q
    ||||||||||||| | || |||  || || || |||||| | ||||||||  |||||  |||||||||||||||||| | ||| |||| | || ||||||    
T  2331743 actatgaagcacggacacagacatcgaacgcgacacggacattgacacgcaaacaccattaataatttgagaaaatcac-ataattcagtgtatttatgt 2331841  T
Q  273 gtcggtgtggtgtcggtgtcgg 294  Q
    |||||||| ||||| |||||||    
T  2331842 gtcggtgtcgtgtcagtgtcgg 2331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 4142936 - 4142875
Alignment:
Q  187 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||| ||| ||||| | |||| ||||||||||||||||| |||| ||||| |||||||    
T  4142936 atacggacaccgaacacgacccggacactgacacgccgacaccactaacaatttaagaaaat 4142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 21091706 - 21091747
Alignment:
Q  207 acggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||| |||||||| ||||||||||||||||||| |||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaagaaaat 21091747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 896200 - 896236
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  896200 actgacacgccgacactgctaatagtttgagaaaatc 896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 10535842 - 10535794
Alignment:
Q  200 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||| ||| |||||| | |||||||||||| |||||||||||||||||    
T  10535842 acacgacacagatactaatacgccgacaccgataataatttgagaaaat 10535794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 30404936 - 30404884
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| | |||||| |||||||||||||||| | ||||||||||| ||||||    
T  30404936 cggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatc 30404884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 31284041 - 31284073
Alignment:
Q  217 acacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||| ||||||||||||||||||||    
T  31284041 acacgccgacactgctaataatttgagaaaatc 31284073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
Q  293 ggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 42832343 - 42832311
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||| |||||||||||||||||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaat 42832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 13349 - 13425
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 20122 - 20279
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atg 271  Q
    |||||||||||  |||||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
Q  272 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 329  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 40917716 - 40917776
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 398858 - 398799
Alignment:
Q  190 cggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 328
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
Q  182 cacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 279  Q
    |||| |||||||| ||||||||| || | | ||||||||||||||||| ||||||||||||||||||| | ||| |||  | |||||  |||||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
Q  280 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 328  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
T  10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||| ||||| |||| || |||||||||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  5376609 actatgaggcacgtatacaga-tccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 5927449 - 5927374
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||| ||||||| |||||||| ||||||||| |||||| ||||||||||  |||| ||||||||||||| ||||||    
T  5927449 ctattaagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatc 5927374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
Q  276 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 12443538 - 12443494
Alignment:
Q  205 gcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  12443538 gcacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 1486796 - 1486703
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 288  Q
    ||||| ||| ||||||||||||||||| ||||| ||||||||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||||    
T  1486796 ccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 289
Target Start/End: Original strand, 38503285 - 38503386
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 286  Q
    |||||| | ||||| | |||||| ||| |||| ||||||||||||||||||||||||||||  ||||||||| | ||||  |||||||||||||  ||||    
T  38503285 acggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T
Q  287 ggt 289  Q
    |||    
T  38503384 ggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 44482234 - 44482343
Alignment:
Q  228 ccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg-----gctaattcgaggagtgtccgt 320  Q
    ||||| |||||||||||||||| | ||| |||| | |||||||  |||||||||| |||||||||||||||| |     |||||| ||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcac-ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacagctaatccgaggagtgtccgt 44482332  T
Q  321 gcttcatagtt 331  Q
    ||| |||||||    
T  44482333 gctccatagtt 44482343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
Q  187 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||||| ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 274
Target Start/End: Original strand, 1262856 - 1262933
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 274  Q
    ||||||||| |||| | || ||||||||||||| |||||||||||||||||||| | ||| |||| |||||||| ||||    
T  1262856 ccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||||||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 39130876 - 39130802
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||||||| |||||||| ||||||||| || ||||| |||||||| |||||   ||||||||| |||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaat 39130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 19562691 - 19562655
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19562691 actgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 609528 - 609493
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||||||||||||| ||||||||||||||||||    
T  609528 actgacacgccgacaccactaataatttgagaaaat 609493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 6415078 - 6415035
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||    
T  6415078 cacggacactgacacgccgacatcgctaattatttgagaaaatc 6415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 31014993 - 31015068
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||| | || ||| |||| |||| |||||  |||||| |||| |||| ||||||||||||||||||||    
T  31014993 ctatgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatc 31015068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 46348460 - 46348417
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  46348460 cacggacactgacacgccgacacagctaataatttgaaaaaatc 46348417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 48450673 - 48450622
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||||| |||||| ||||||||||| |||| ||||||||||||| |||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaat 48450622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 3490460 - 3490426
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||||||||||||| ||||||||||||||||||    
T  3490460 actgacacgccgacactgctaataatttgagaaaa 3490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 10475045 - 10475011
Alignment:
Q  215 tgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||||||||| |||||||||||    
T  10475045 tgacacgccgacaccgctaataacttgagaaaatc 10475011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 15641130 - 15641064
Alignment:
Q  183 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||| ||||||  |||||| | |||||| ||||||| |||||||| ||||||||||| ||||||||    
T  15641130 acgaacacggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatc 15641064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 40285724 - 40285686
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatcgc 251  Q
    |||||||| || |||||||||||||||||||||||||||    
T  40285724 actgacacaccaacaccgctaataatttgagaaaatcgc 40285686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 20157437 - 20157384
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| |||||  ||||||||  |||||||||||||||| ||||||||||    
T  20157437 ccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatc 20157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 21530681 - 21530714
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||| ||||||||||||||||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatc 21530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 25361881 - 25361960
Alignment:
Q  219 acgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    ||||||||||| || |||||||||||||||| | ||| |||| | ||||  |||||||| |||| ||||||||||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcac-ataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggaca 25361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 41877534 - 41877505
Alignment:
Q  219 acgccgacaccgctaataatttgagaaaat 248  Q
    ||||||||||||||||||||||||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaat 41877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 9828036 - 9828118
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataa--ttatgtgtcggtgtggtgtcggtgtcggaca 297  Q
    |||||||||||||| |||||||||||| |||||| | ||| |||| | |||  |||||||||||||| ||||| ||||| ||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcac-ataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagaca 9828118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 10577829 - 10577769
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| || ||||||||||||| ||||||  ||| ||||||||    
T  10577829 acggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatc 10577769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 18556533 - 18556497
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||| |||||||||||||||| |||||||||||||    
T  18556533 cacggacactgacacgccgacacagctaataatttga 18556497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 25452215 - 25452152
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 280  Q
    |||| ||| |||| |||||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  25452215 gacatgccaacactgctaataatttgagaaaatctc-ataattcagtgtaattatgtgtcggtgt 25452152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 34315663 - 34315722
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaa 234  Q
    |||||||||||| ||||||| |  ||||||| |||||||||||||| |||||||| |||||    
T  34315663 ctatgaagcacggatacgga-tatggacacgacacggatactgacatgccgacacagctaa 34315722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 8383207 - 8383282
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||| |||||| | |||||| | ||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  8383207 ctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 5441128 - 5441029
Alignment:
Q  187 atacggac-tccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgt 285  Q
    |||||||| |||||||||| ||| || |||||||||||| ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| ||||    
T  5441128 atacggacatccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgt 5441030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 299
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
Q  210 gatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 299  Q
    |||| ||||||||| ||||||||||||||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 24205135 - 24205076
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataattt 240  Q
    |||||||||||| |||||||| ||||| ||| |||||| | ||||| ||||||||||||||||||||    
T  8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 5407325 - 5407261
Alignment:
Q  205 gcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 270  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||    
T  5407325 gcacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 28917966 - 28918026
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 4991061 - 4991002
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||| ||||| |||||| |||||||| ||||||||||||||| |||||||||||    
T  4991061 acggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
Q  183 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||||  ||||||||||||    
T  10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 297
Target Start/End: Original strand, 25064859 - 25064981
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 273  Q
    ||||||| ||||  ||| ||| ||||||||| ||| || | ||||||||||||||||||||| |||||| |||||| | ||| || | | ||||||||||    
T  25064859 ctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtg 25064957  T
Q  274 tcggtgtggtgtcggtgtcggaca 297  Q
    | ||| | |||| |||||||||||    
T  25064958 ttggtatcgtgttggtgtcggaca 25064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||  |||||||| ||||| ||| |||||| ||||| ||||||||||  |||||||||||| ||||||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 8587129 - 8587055
Alignment:
Q  175 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||  |||||||| ||||||| | |||||| ||||||||||||||||  ||| |||||||| ||||||    
T  8587129 tatgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatc 8587055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
Q  198 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||| |||| | ||||||||||||||||| ||||||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
Q  175 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||| |||||||| ||||||||  |||| | | |||||| |||||| |||||||||||| ||||||||    
T  32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| | |||| ||||||||||||||||| ||||| |||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 15796388 - 15796328
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| | |||||||||||||| | ||||||||||| ||||||    
T  15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 245
Target Start/End: Original strand, 21720746 - 21720785
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaa 245  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  21720746 cacggacactgacacgccgacaccgataataatttgagaa 21720785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  293 ggacatggctaattcgaggagtgtccgtgcttcatagtt 331  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 331
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  301 ctaattcgaggagtgtccgtgcttcatagtt 331  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 12674585 - 12674535
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||| | |||||| ||||||| ||||||||||||||||||||    
T  12674585 gacacgacacggacattgacacaccgacactgctaataatttgagaaaatc 12674535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  293 ggacatggctaattcgaggagtgtccgtgcttcatagtt 331  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 14223962 - 14223889
Alignment:
Q  173 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    ||||||||||||||| || ||| | ||||||| ||| || || ||||||||||||| | ||||||||||||||||    
T  14223962 actatgaagcacgaacacagacac-ggacacgacacagacaccgacacgccgacacagataataatttgagaaaa 14223889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 3865633 - 3865592
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  3865633 cacggacactgacacgccgacacagctaataatttgaaaaaa 3865592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 12703989 - 12704030
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  12703989 cacggatatggacacgccgacaccactaataatttgagaaaa 12704030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 34307846 - 34307794
Alignment:
Q  217 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 270  Q
    |||||| |||||||||||||||||||||||||| | |||||||| | |||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcac-atatttcagtgtaattat 34307794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 3164119 - 3164059
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| | || |||| |||||| ||||||||||||| ||||||    
T  3164119 acggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatc 3164059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 4987361 - 4987325
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  4987361 actgacacgccgacacagctaataatttgaaaaaatc 4987325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 6525750 - 6525714
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||| | |||||||||||||||||||||||||||    
T  6525750 actgacatgtcgacaccgctaataatttgagaaaatc 6525714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 10318111 - 10318075
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||| |||||||||||||||| |||||||||||||    
T  10318111 cacggacactgacacgccgacacagctaataatttga 10318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 14618732 - 14618804
Alignment:
Q  175 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||||||||  ||||||| || |||||| |||||  ||||| |||| |||||| |||||||||| ||||||    
T  14618732 tatgaagcacgggtacggacaccagacacgacacgggcactgagacgctgacacccctaataatttaagaaaa 14618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 14832080 - 14832124
Alignment:
Q  205 gcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||| |||||||||| || ||||||||||||| ||||||    
T  14832080 gcacggatacggacacgccgatacagctaataatttgaaaaaatc 14832124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 21479107 - 21479143
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  21479107 actgacacgccgacacagctaataatttgaaaaaatc 21479143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 25074781 - 25074813
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||||||||||| |||||||||||||||||    
T  25074781 gacacgccgacaccgataataatttgagaaaat 25074813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 26290360 - 26290396
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||||  ||||||||||||||||||    
T  26290360 actgacacgccgacaccattaataatttgagaaaatc 26290396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 26508083 - 26508135
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||  || ||||||||||||| ||||| ||||||||||||| ||||||    
T  26508083 cggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatc 26508135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
Q  293 ggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 40052321 - 40052357
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  40052321 actgacacgccgacacagctaataatttgaaaaaatc 40052357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 329
Target Start/End: Original strand, 21002 - 21149
Alignment:
Q  183 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 280  Q
    ||||| |||||| || |||||| |||||| ||||||| || ||||| | |||||||||||||||||| | |||  ||  ||||||  ||||||||||| |    
T  21002 acgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtat 21100  T
Q  281 ggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
     ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
T  21101 cgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 21217 - 21278
Alignment:
Q  268 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 21346 - 21407
Alignment:
Q  268 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 8763 - 8823
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||    
T  8763 acggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 225362 - 225303
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  225362 acggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 297
Target Start/End: Original strand, 241559 - 241668
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 286  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||||||  |||||| | ||| || | | |||||||  |||||||||| ||||     
T  241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgtt 241657  T
Q  287 ggtgtcggaca 297  Q
    |||||||||||    
T  241658 ggtgtcggaca 241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 92790 - 92831
Alignment:
Q  207 acggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 53170 - 53256
Alignment:
Q  214 ctgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 299  Q
    |||||||||||| ||||| ||||||||||||||||| | ||| |||| | |||||||  |||||||||  ||||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 178925 - 178853
Alignment:
Q  177 tgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| |||  ||| ||||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 192325 - 192284
Alignment:
Q  207 acggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 23293080 - 23293020
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||    
T  23293080 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaat 248  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
Q  213 actgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||||||||||||||||||||||||||||||||    
T  17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 847918 - 847975
Alignment:
Q  191 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||| ||||||||| ||| || |||||||||||||  |||||||||||||||||||||    
T  847918 ggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
Q  196 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||| | |||| ||||||||||| ||||| |||||||||||||||||||    
T  36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 24343472 - 24343531
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||||||||| ||||||  | ||||||||||||| | |||||||||||||||||    
T  24343472 acggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaat 24343531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 30982967 - 30982863
Alignment:
Q  191 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 288  Q
    |||| ||||| ||| |||||| || ||||||||   ||||||||| ||||||||||||| | |||||||| | |||||||  |||||||||| |||||||    
T  30982967 ggacaccggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcac-atatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T
Q  289 tgtcggaca 297  Q
    |||| ||||    
T  30982871 tgtcagaca 30982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 7012048 - 7012090
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| || ||||||||||||||| |||||||||||||||||    
T  7012048 cacggacaccgacacgccgacaccgataataatttgagaaaat 7012090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 7670625 - 7670709
Alignment:
Q  168 catatactatgaagcacgaatacggactccggacacggcacggatactgaca---cgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||||||||| |||  ||||||||| | |||| |||||||   ||||||||  ||||||| ||||||||||||    
T  7670625 catatagtatgaagcacgaatatggataccggacacgacgcggaaactgacacgtcgccgacattgctaatagtttgagaaaatc 7670709  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 20521933 - 20521883
Alignment:
Q  199 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||| ||||||    
T  20521933 gacacgacacggacactgacacgccgataccgataataatttgataaaatc 20521883  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 20633450 - 20633508
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||| || ||||||  ||||| ||||||||| |||||||||||||||||||| ||||    
T  20633450 acggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 329
Target Start/End: Original strand, 30298928 - 30299048
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 303  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30298928 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30299022  T
Q  304 attcgaggagtgtccgtgcttcatag 329  Q
    || |||||||||||||||||||||||    
T  30299023 atccgaggagtgtccgtgcttcatag 30299048  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 329
Target Start/End: Original strand, 30327796 - 30327916
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 303  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30327796 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30327890  T
Q  304 attcgaggagtgtccgtgcttcatag 329  Q
    || |||||||||||||||||||||||    
T  30327891 atccgaggagtgtccgtgcttcatag 30327916  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 40613441 - 40613475
Alignment:
Q  215 tgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||||||||| ||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatc 40613475  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 28084475 - 28084544
Alignment:
Q  178 gaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 247  Q
    |||||||  |||||||| ||||||||| ||| ||  ||||||||||||||| ||||| ||||||| ||||    
T  28084475 gaagcacagatacggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaa 28084544  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 1747205 - 1747237
Alignment:
Q  217 acacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||||||||| |||||||||||    
T  1747205 acacgccgacaccgctaataaattgagaaaatc 1747237  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 5775469 - 5775392
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacgga---tactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||||||||||| |||| | ||||||| ||||||   |||||||||  |||||||  ||||||||||||||||||    
T  5775469 ctatgaagcacgaatatggacacaggacacgacacggacactactgacac-acgacaccattaataatttgagaaaatc 5775392  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 16184801 - 16184842
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||||||||||||||  |||||||||||||||||||||    
T  16184801 cacggacactgacacgccgac--cgctaataatttgagaaaatc 16184842  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
Q  285 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
Q  293 ggacatggctaattcgaggagtgtccgtgcttcatag 329  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 28720827 - 28720894
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 242  Q
    |||||||||||| |||| ||| | ||||||| |||| | ||||||| |||||||| |||||||||||||    
T  28720827 ctatgaagcacgtatacagacac-ggacacgacacgaacactgacatgccgacacagctaataatttga 28720894  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 556 - 496
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| ||| ||||| |||||| ||||| |||||||||| ||||||||||||| ||||||    
T  556 acggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatc 496  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 17979 - 17903
Alignment:
Q  174 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcg 250  Q
    |||||||||||| |||||||| | |||||||  ||  | ||  ||||||| ||||||||||||||||||||||||||    
T  17979 ctatgaagcacggatacggacactggacacgatacaaacaccaacacgcctacaccgctaataatttgagaaaatcg 17903  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 3281 - 3340
Alignment:
Q  189 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 248  Q
    |||||| ||||||||| |||||||||||||||| |||||  ||||| ||||| |||||||    
T  3281 acggacaccggacacgacacggatactgacacgtcgacaatgctaacaattttagaaaat 3340  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 51793 - 51836
Alignment:
Q  206 cacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  51793 cacggacactgacacgccgacacagctaataatttgaaaaaatc 51836  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 1636 - 1669
Alignment:
Q  216 gacacgccgacaccgctaataatttgagaaaatc 249  Q
    ||||||||||||||| ||||||||||||||||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatc 1669  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 28830 - 28913
Alignment:
Q  204 ggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 286  Q
    |||||| | ||| |||||||||||||| ||||||||| |||||||||| ||| |||| | ||||  ||||||||||||| |||||    
T  28830 ggcacgaacactaacacgccgacaccgttaataatttaagaaaatcgc-ataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 329
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
Q  301 ctaattcgaggagtgtccgtgcttcatag 329  Q
    |||||||||||||||||||||||||||||    
T  8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 46655 - 46707
Alignment:
Q  197 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 249  Q
    |||||||| |||||| | |||||||||||||| | ||||||||||| ||||||    
T  46655 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 46707  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 46731 - 46778
Alignment:
Q  283 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 331  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

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