View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21211_high_5 (Length: 343)

Name: NF21211_high_5
Description: NF21211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21211_high_5
NF21211_high_5
[»] chr5 (11 HSPs)
chr5 (15-266)||(22750998-22751249)
chr5 (63-246)||(38144532-38144714)
chr5 (71-246)||(28370058-28370232)
chr5 (71-246)||(19512263-19512438)
chr5 (58-181)||(23528573-23528695)
chr5 (71-132)||(18407947-18408008)
chr5 (71-132)||(23111203-23111264)
chr5 (71-123)||(22438751-22438803)
chr5 (71-122)||(19236900-19236951)
chr5 (71-120)||(22461158-22461207)
chr5 (71-120)||(22467782-22467831)
[»] chr7 (24 HSPs)
chr7 (15-266)||(18873217-18873468)
chr7 (71-266)||(15168032-15168227)
chr7 (72-266)||(10895795-10895989)
chr7 (64-266)||(14422841-14423043)
chr7 (63-263)||(12709839-12710038)
chr7 (63-263)||(13122910-13123109)
chr7 (63-266)||(13743566-13743768)
chr7 (71-246)||(16009454-16009628)
chr7 (63-259)||(12590639-12590832)
chr7 (63-181)||(13007374-13007491)
chr7 (71-236)||(16677180-16677347)
chr7 (71-236)||(17651416-17651583)
chr7 (71-123)||(11382874-11382926)
chr7 (71-123)||(11389351-11389403)
chr7 (71-123)||(20311055-20311107)
chr7 (71-123)||(21230963-21231015)
chr7 (71-131)||(13679485-13679545)
chr7 (71-122)||(2971254-2971305)
chr7 (71-122)||(11311059-11311110)
chr7 (71-122)||(20906465-20906516)
chr7 (73-124)||(46625961-46626012)
chr7 (63-103)||(831629-831669)
chr7 (63-103)||(1196809-1196849)
chr7 (63-103)||(34958578-34958618)
[»] scaffold0029 (1 HSPs)
scaffold0029 (63-266)||(111738-111942)
[»] scaffold0026 (2 HSPs)
scaffold0026 (63-266)||(11846-12049)
scaffold0026 (71-246)||(111563-111737)
[»] chr3 (22 HSPs)
chr3 (71-266)||(14762761-14762956)
chr3 (71-266)||(20247792-20247987)
chr3 (71-266)||(38310803-38310998)
chr3 (71-261)||(24192817-24193008)
chr3 (71-246)||(9534205-9534379)
chr3 (71-246)||(23370509-23370684)
chr3 (71-181)||(24933832-24933941)
chr3 (63-149)||(41455093-41455178)
chr3 (63-207)||(16801463-16801606)
chr3 (71-246)||(55499105-55499281)
chr3 (71-129)||(18929239-18929297)
chr3 (71-132)||(17240516-17240577)
chr3 (71-122)||(13302244-13302295)
chr3 (71-122)||(13323791-13323842)
chr3 (71-122)||(12033448-12033499)
chr3 (71-122)||(13312900-13312951)
chr3 (71-122)||(17131732-17131783)
chr3 (71-122)||(51301589-51301640)
chr3 (71-181)||(10389447-10389557)
chr3 (71-181)||(10414536-10414646)
chr3 (71-181)||(10421206-10421316)
chr3 (71-124)||(16801027-16801080)
[»] chr6 (24 HSPs)
chr6 (71-266)||(23057795-23057990)
chr6 (63-266)||(29614142-29614345)
chr6 (63-264)||(18800296-18800497)
chr6 (71-246)||(23839075-23839250)
chr6 (71-266)||(4477714-4477909)
chr6 (71-246)||(10986184-10986359)
chr6 (63-200)||(930091-930227)
chr6 (63-181)||(12168305-12168422)
chr6 (63-181)||(19287214-19287331)
chr6 (63-181)||(19785865-19785982)
chr6 (63-181)||(19878398-19878515)
chr6 (63-181)||(19884174-19884291)
chr6 (71-150)||(34639990-34640069)
chr6 (71-266)||(21565215-21565410)
chr6 (71-150)||(34646664-34646743)
chr6 (71-181)||(25469708-25469816)
chr6 (75-123)||(24512851-24512899)
chr6 (71-120)||(9187498-9187547)
chr6 (71-124)||(25348486-25348539)
chr6 (71-124)||(25598643-25598696)
chr6 (71-124)||(25397172-25397225)
chr6 (71-124)||(2286770-2286823)
chr6 (71-124)||(19471338-19471391)
chr6 (71-132)||(31252413-31252474)
[»] scaffold1773 (1 HSPs)
scaffold1773 (63-266)||(1036-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (63-266)||(50037-50238)
[»] chr4 (12 HSPs)
chr4 (63-266)||(8045828-8046030)
chr4 (63-266)||(11847964-11848173)
chr4 (71-181)||(53483646-53483756)
chr4 (71-123)||(15408139-15408191)
chr4 (71-124)||(8834895-8834948)
chr4 (71-124)||(13888641-13888694)
chr4 (71-122)||(14486661-14486712)
chr4 (73-124)||(22724691-22724742)
chr4 (71-124)||(15245215-15245268)
chr4 (73-124)||(15308120-15308171)
chr4 (73-122)||(27906266-27906315)
chr4 (63-103)||(15747552-15747592)
[»] scaffold0025 (1 HSPs)
scaffold0025 (71-266)||(14399-14595)
[»] scaffold0924 (1 HSPs)
scaffold0924 (63-266)||(746-949)
[»] scaffold0247 (1 HSPs)
scaffold0247 (63-245)||(11219-11401)
[»] chr8 (14 HSPs)
chr8 (71-246)||(44477500-44477674)
chr8 (71-246)||(44492658-44492832)
chr8 (63-247)||(23866490-23866674)
chr8 (71-246)||(8727736-8727911)
chr8 (71-181)||(17054533-17054642)
chr8 (13-124)||(18614271-18614382)
chr8 (71-132)||(23482056-23482117)
chr8 (159-246)||(27940946-27941032)
chr8 (71-124)||(39364919-39364972)
chr8 (71-122)||(29643389-29643440)
chr8 (71-123)||(14056567-14056619)
chr8 (71-123)||(25111976-25112028)
chr8 (71-122)||(24320674-24320725)
chr8 (71-124)||(21931696-21931749)
[»] chr2 (15 HSPs)
chr2 (71-246)||(6483595-6483769)
chr2 (71-246)||(6487062-6487236)
chr2 (71-266)||(19661457-19661651)
chr2 (63-236)||(26583715-26583886)
chr2 (71-246)||(23878885-23879059)
chr2 (71-266)||(23089058-23089253)
chr2 (71-246)||(23101466-23101641)
chr2 (71-181)||(5706027-5706137)
chr2 (71-132)||(23265133-23265194)
chr2 (71-132)||(23280201-23280262)
chr2 (71-129)||(21908353-21908411)
chr2 (71-124)||(24661576-24661629)
chr2 (71-122)||(10577-10628)
chr2 (71-122)||(25180933-25180984)
chr2 (71-171)||(26885133-26885233)
[»] scaffold0117 (2 HSPs)
scaffold0117 (63-266)||(1893-2095)
scaffold0117 (63-266)||(8570-8772)
[»] chr1 (12 HSPs)
chr1 (71-246)||(20437027-20437202)
chr1 (63-181)||(41111977-41112094)
chr1 (13-132)||(32651563-32651682)
chr1 (71-132)||(18712790-18712851)
chr1 (71-123)||(19663520-19663572)
chr1 (71-124)||(10811786-10811839)
chr1 (71-124)||(20805320-20805373)
chr1 (71-123)||(11158093-11158145)
chr1 (71-122)||(20851136-20851187)
chr1 (71-122)||(20857763-20857814)
chr1 (71-122)||(21706276-21706327)
chr1 (71-122)||(21710818-21710869)
[»] scaffold0058 (1 HSPs)
scaffold0058 (63-266)||(149-350)
[»] scaffold0553 (1 HSPs)
scaffold0553 (71-246)||(10199-10374)
[»] scaffold0544 (1 HSPs)
scaffold0544 (71-246)||(1529-1704)
[»] scaffold0090 (1 HSPs)
scaffold0090 (63-265)||(18026-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (15-150)||(904-1039)
scaffold0456 (15-150)||(8049-8184)
scaffold0456 (213-266)||(846-899)
scaffold0456 (213-266)||(7991-8044)
[»] scaffold0154 (1 HSPs)
scaffold0154 (63-207)||(30772-30917)
[»] scaffold0796 (2 HSPs)
scaffold0796 (63-181)||(1728-1845)
scaffold0796 (63-181)||(5751-5868)
[»] scaffold0476 (1 HSPs)
scaffold0476 (71-264)||(3296-3490)
[»] scaffold0077 (1 HSPs)
scaffold0077 (71-246)||(3625-3800)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-132)||(116887-116998)
[»] scaffold0129 (1 HSPs)
scaffold0129 (71-179)||(45278-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (71-132)||(16811-16872)
[»] scaffold0461 (1 HSPs)
scaffold0461 (71-132)||(11-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (71-132)||(13623-13684)
[»] scaffold0020 (1 HSPs)
scaffold0020 (71-132)||(101931-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (71-123)||(17643-17695)
[»] scaffold0107 (1 HSPs)
scaffold0107 (71-123)||(40535-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (71-123)||(135473-135525)
[»] scaffold0235 (1 HSPs)
scaffold0235 (71-121)||(22596-22646)
[»] scaffold0124 (1 HSPs)
scaffold0124 (71-123)||(34279-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (71-124)||(12296-12349)
[»] scaffold0317 (1 HSPs)
scaffold0317 (71-131)||(1378-1438)
[»] scaffold0139 (1 HSPs)
scaffold0139 (71-123)||(15000-15052)
[»] scaffold0634 (1 HSPs)
scaffold0634 (227-266)||(3519-3558)
[»] scaffold0096 (1 HSPs)
scaffold0096 (71-124)||(39510-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (71-119)||(1453-1501)
[»] scaffold1318 (1 HSPs)
scaffold1318 (71-122)||(1916-1967)
[»] scaffold0348 (1 HSPs)
scaffold0348 (71-122)||(9336-9387)
[»] scaffold0127 (1 HSPs)
scaffold0127 (71-122)||(10239-10290)
[»] scaffold0023 (1 HSPs)
scaffold0023 (71-122)||(135438-135489)
[»] scaffold0001 (1 HSPs)
scaffold0001 (71-122)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (63-156)||(680-774)
[»] scaffold0609 (1 HSPs)
scaffold0609 (71-132)||(5861-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (71-124)||(2631-2684)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 266
Target Start/End: Complemental strand, 22751249 - 22750998
Alignment:
Q  15 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 114  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  22751249 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 22751150  T
Q  115 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 214  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  22751149 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 22751050  T
Q  215 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751049 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 22750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 38144532 - 38144714
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  38144532 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttag 38144631  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  38144632 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 38144714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 28370058 - 28370232
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  28370058 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 28370157  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  28370158 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 28370232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 19512438 - 19512263
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  19512438 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 19512339  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  19512338 tgatgattttgaggggaa-tgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatct 19512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 23528695 - 23528573
Alignment:
Q  58 cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagg 157  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||      
T  23528695 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaa 23528597  T
Q  158 gttagggtttaatgatgattctga 181  Q
    |||||||||| |||||||||||||    
T  23528596 gttagggtttgatgatgattctga 23528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 18407947 - 18408008
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407947 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 23111203 - 23111264
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111203 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22438751 - 22438803
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438751 ggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 19236951 - 19236900
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236951 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 22461207 - 22461158
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 120  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461207 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 22467831 - 22467782
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 120  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467831 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 266
Target Start/End: Complemental strand, 18873468 - 18873217
Alignment:
Q  15 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 114  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  18873468 gagaagaacaagtatagtcagagaatccggccgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 18873369  T
Q  115 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 214  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  18873368 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 18873269  T
Q  215 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873268 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 18873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 71 - 266
Target Start/End: Complemental strand, 15168227 - 15168032
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  15168227 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 15168128  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168127 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 15168032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 72 - 266
Target Start/End: Original strand, 10895795 - 10895989
Alignment:
Q  72 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 10895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 64 - 266
Target Start/End: Complemental strand, 14423043 - 14422841
Alignment:
Q  64 aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttag 162  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 262  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||    
T  14422943 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  263 cata 266  Q
    ||||    
T  14422844 cata 14422841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 63 - 263
Target Start/End: Original strand, 12709839 - 12710038
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12709839 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12709938 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 12710036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 63 - 263
Target Start/End: Original strand, 13122910 - 13123109
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13122910 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  13123009 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 13123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 13743768 - 13743566
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13743768 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 262  Q
    ||||| ||||||||| ||||| ||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  |||||||||    
T  13743669 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgat 13743570  T
Q  263 cata 266  Q
    ||||    
T  13743569 cata 13743566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 16009628 - 16009454
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| ||||| ||    
T  16009628 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggtttgat 16009529  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  16009528 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 16009454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 63 - 259
Target Start/End: Original strand, 12590639 - 12590832
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12590639 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgt 259  Q
    ||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| ||||||||| |||||||  ||||| ||||||    
T  12590738 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgt 12590832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 13007491 - 13007374
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  13007491 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  13007392 ggtttgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 16677347 - 16677180
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  16677347 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 16677248  T
Q  169 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 236  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  16677247 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 17651583 - 17651416
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  17651583 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 17651484  T
Q  169 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 236  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  17651483 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 11382874 - 11382926
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382874 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 11389351 - 11389403
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389351 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 20311055 - 20311107
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311055 ggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 21230963 - 21231015
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230963 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 13679545 - 13679485
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 131  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679545 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 2971305 - 2971254
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971305 ggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 11311110 - 11311059
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311110 ggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 20906465 - 20906516
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906465 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 46626012 - 46625961
Alignment:
Q  73 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626012 taagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 831629 - 831669
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataa 103  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  831629 aaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 1196809 - 1196849
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataa 103  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  1196809 aaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 34958618 - 34958578
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataa 103  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  34958618 aaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 111942 - 111738
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 161  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  111942 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtta 111843  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111842 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 111743  T
Q  262 tcata 266  Q
    |||||    
T  111742 tcata 111738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 11846 - 12049
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11846 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttag 11945  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 262  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11946 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgat 12045  T
Q  263 cata 266  Q
    ||||    
T  12046 cata 12049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 111737 - 111563
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  111737 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 111638  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  111637 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 111563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 5e-90; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 14762761 - 14762956
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  14762761 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 14762860  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762861 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 14762956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 20247792 - 20247987
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  20247792 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 20247891  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247892 gatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 20247987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 38310803 - 38310998
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  38310803 ggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttgat 38310902  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310903 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 38310998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 71 - 261
Target Start/End: Complemental strand, 24193008 - 24192817
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  24193008 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 24192909  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||||||| || || ||||||||    
T  24192908 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtga 24192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 9534379 - 9534205
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  9534379 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 9534280  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||  |||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  9534279 gatgattctgagtggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 9534205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 23370509 - 23370684
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  23370509 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 23370608  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  23370609 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 23370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 24933832 - 24933941
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   ||||||||| ||    
T  24933832 ggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgat 24933930  T
Q  171 gatgattctga 181  Q
    |||||||||||    
T  24933931 gatgattctga 24933941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 41455093 - 41455178
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 149  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41455093 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 207
Target Start/End: Original strand, 16801463 - 16801606
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 161  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| |||||    
T  16801463 aaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggtta 16801561  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 207  Q
    ||| || ||||||||| ||| | |||| | ||||||||| ||||||    
T  16801562 ggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaa 16801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 55499105 - 55499281
Alignment:
Q  71 ggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 168  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  |||||||||||||||||||     
T  55499105 ggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggtttg 55499204  T
Q  169 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  55499205 atgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 55499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 18929297 - 18929239
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 129  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929297 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 17240516 - 17240577
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240516 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 13302244 - 13302295
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302244 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 13323791 - 13323842
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323791 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 12033448 - 12033499
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033448 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 13312900 - 13312951
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312900 ggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 17131783 - 17131732
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131783 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 51301640 - 51301589
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301640 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 10389447 - 10389557
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10389447 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10389546  T
Q  171 gatgattctga 181  Q
    |||||||||||    
T  10389547 gatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 10414536 - 10414646
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10414536 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10414635  T
Q  171 gatgattctga 181  Q
    |||||||||||    
T  10414636 gatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 10421206 - 10421316
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10421206 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10421305  T
Q  171 gatgattctga 181  Q
    |||||||||||    
T  10421306 gatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 16801080 - 16801027
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801080 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 1e-87; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 71 - 266
Target Start/End: Complemental strand, 23057990 - 23057795
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  23057990 ggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 23057891  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057890 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 23057795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 29614142 - 29614345
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttgg-aaaataaattgagggtta 161  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||    
T  29614142 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtta 29614241  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||| ||||| ||  |||||| |||||||||||||||||||||||| ||||||||    
T  29614242 gggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtga 29614340  T
Q  262 tcata 266  Q
    |||||    
T  29614341 tcata 29614345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 63 - 264
Target Start/End: Complemental strand, 18800497 - 18800296
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 161  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18800497 aaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 18800398  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||| | ||| || |||||    
T  18800397 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtga 18800299  T
Q  262 tca 264  Q
    |||    
T  18800298 tca 18800296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 23839250 - 23839075
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagt-tttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |    
T  23839250 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtttga 23839151  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||| ||||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  23839150 tgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 23839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 71 - 266
Target Start/End: Complemental strand, 4477909 - 4477714
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  4477909 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 4477810  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    |||||||||||| ||||| |||||| ||||| || ||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  4477809 tgatgattctgaggggaa-tgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 10986184 - 10986359
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  10986184 ggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 10986283  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  10986284 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 10986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 930091 - 930227
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  930091 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttag 930190  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatc 200  Q
    ||||| |||||| |||||||||||| ||||||||||||    
T  930191 ggtttgatgatgtttctgaagggaa-tgggtaatgatc 930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 12168422 - 12168305
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12168422 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  12168323 ggtttgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 19287331 - 19287214
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19287331 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  19287232 ggtttgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 19785865 - 19785982
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||    
T  19785865 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  19785964 ggtttgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 19878515 - 19878398
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19878515 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  19878416 ggtttgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 19884291 - 19884174
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19884291 aaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  19884192 ggtttgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 34639990 - 34640069
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 150  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639990 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 21565215 - 21565410
Alignment:
Q  71 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  21565215 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 21565314  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  21565315 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 21565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 34646664 - 34646743
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 150  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646664 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 25469708 - 25469816
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   ||||||||| ||    
T  25469708 ggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgat 25469805  T
Q  171 gatgattctga 181  Q
    ||| |||||||    
T  25469806 gataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 24512851 - 24512899
Alignment:
Q  75 agggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512851 agggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 9187547 - 9187498
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 120  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187547 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 25348539 - 25348486
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348539 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 25598696 - 25598643
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598696 ggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 25397225 - 25397172
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397225 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 2286770 - 2286823
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286770 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 19471338 - 19471391
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471338 ggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 31252474 - 31252413
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    ||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252474 ggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 1237 - 1036
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1237 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 262  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1138 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 1040  T
Q  263 cata 266  Q
    ||||    
T  1039 cata 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 50238 - 50037
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50238 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 262  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  50139 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 50041  T
Q  263 cata 266  Q
    ||||    
T  50040 cata 50037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 8045828 - 8046030
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8045828 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 8045926  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 262  Q
    ||||| | ||  ||||||||||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  8045927 ggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgat 8046026  T
Q  263 cata 266  Q
    ||||    
T  8046027 cata 8046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 11848173 - 11847964
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||    
T  11848173 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgag 11848074  T
Q  157 ggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 256  Q
    ||||||||||| |||| |||||||||| | | |||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||    
T  11848073 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgc 11847974  T
Q  257 tgtgatcata 266  Q
    ||||||||||    
T  11847973 tgtgatcata 11847964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 53483756 - 53483646
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 169  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  53483756 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 53483658  T
Q  170 tgatgattctga 181  Q
    ||||||||||||    
T  53483657 tgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 15408191 - 15408139
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408191 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 8834948 - 8834895
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834948 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 13888694 - 13888641
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888694 ggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 14486712 - 14486661
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486712 ggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  73 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 15245268 - 15245215
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245268 ggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 15308171 - 15308120
Alignment:
Q  73 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308171 taagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 27906315 - 27906266
Alignment:
Q  73 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906315 taagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 15747552 - 15747592
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataa 103  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  15747552 aaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 14399 - 14595
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  14399 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 14498  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||| ||||||||||||||||| || || |||||||||||||    
T  14499 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcata 14595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 746 - 949
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  746 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtta 845  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    |||||| |||| |||| ||||||||| |||||||||||| || |||| | ||||||||||||||||||| || ||||||||||| |||||| || |||||    
T  846 gggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtga 944  T
Q  262 tcata 266  Q
    |||||    
T  945 tcata 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 245
Target Start/End: Complemental strand, 11401 - 11219
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11401 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 11302  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatc 245  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||    
T  11301 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatc 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 44477674 - 44477500
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44477674 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44477575  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44477574 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44477500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 44492832 - 44492658
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44492832 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44492733  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44492732 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44492658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 63 - 247
Target Start/End: Complemental strand, 23866674 - 23866490
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23866674 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctt 247  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  ||||||||||||    
T  23866575 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatctt 23866490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 8727736 - 8727911
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  8727736 ggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 8727835  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
     ||||||||||| ||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  8727836 cgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 8727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 17054642 - 17054533
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||| ||    
T  17054642 ggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgat 17054544  T
Q  171 gatgattctga 181  Q
    |||||||||||    
T  17054543 gatgattctga 17054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 18614382 - 18614271
Alignment:
Q  13 gtgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataat 111  Q
    |||||| ||||||||| |||||||||||| | || |||||||||| ||||||||  || ||||||||||||||||||||||||||||||| || ||||||    
T  18614382 gtgagaagaacaagtagagtcagagaatccgatcattgtgcgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatgatatataat 18614284  T
Q  112 ttctgaaaattga 124  Q
    |||||||||||||    
T  18614283 ttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 23482056 - 23482117
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482056 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 27940946 - 27941032
Alignment:
Q  159 ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||  ||||||| |||||||||||||||||| |||||||    
T  27940946 ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatct 27941032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 39364972 - 39364919
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364972 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 29643389 - 29643440
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643389 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 14056567 - 14056619
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056567 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 25112028 - 25111976
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112028 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 24320674 - 24320725
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320674 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 21931749 - 21931696
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931749 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 6483769 - 6483595
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6483769 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6483670  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6483669 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6483595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 6487236 - 6487062
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6487236 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6487137  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6487136 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 19661457 - 19661651
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  19661457 ggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 19661556  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  19661557 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 19661651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 26583886 - 26583715
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26583886 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 26583788  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 236  Q
    || || ||||||||||||| |||||  ||||||||||| |||||| |   ||||||  | ||||||||||||||    
T  26583787 ggcttgatgatgattctgaggggaa-agggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 26583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 246
Target Start/End: Complemental strand, 23879059 - 23878885
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 170  Q
    ||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||||||   |    
T  23879059 ggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggttgt-t 23878961  T
Q  171 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    ||||||||||| |||||| ||||||||||| ||||||||   ||||||| | ||||||||||||||| ||||||||    
T  23878960 gatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatct 23878885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 23089058 - 23089253
Alignment:
Q  71 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  23089058 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 23089157  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  23089158 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 23089253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 23101466 - 23101641
Alignment:
Q  71 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||||||| |    
T  23101466 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtttga 23101565  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||| ||||| |||||||||||| ||||||||   ||||||| | | |||| |||||||| ||||||||    
T  23101566 tgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatct 23101641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 71 - 181
Target Start/End: Original strand, 5706027 - 5706137
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 169  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  5706027 ggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 5706125  T
Q  170 tgatgattctga 181  Q
    ||||||||||||    
T  5706126 tgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 23265194 - 23265133
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265194 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 23280262 - 23280201
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280262 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 21908411 - 21908353
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 129  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908411 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 24661629 - 24661576
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661629 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 10628 - 10577
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10628 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 25180933 - 25180984
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180933 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 26885233 - 26885133
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtt-ttggaaaataaattgagggttagggtttaa 169  Q
    |||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| |  ||||| ||||| || ||||||||  ||||||| |||    
T  26885233 ggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattagggtataa 26885135  T
Q  170 tg 171  Q
    ||    
T  26885134 tg 26885133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 1893 - 2095
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggtta 161  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  1893 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 1992  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    |||||| ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  1993 gggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtga 2090  T
Q  262 tcata 266  Q
    |||||    
T  2091 tcata 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 63 - 266
Target Start/End: Original strand, 8570 - 8772
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggtta 161  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  8570 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 8669  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 261  Q
    |||||| ||||||||| ||| ||  | |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  8670 gggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtga 8767  T
Q  262 tcata 266  Q
    |||||    
T  8768 tcata 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 6e-62; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 20437027 - 20437202
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  20437027 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 20437126  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||| ||||| |||||| ||||| ||||||||   ||||||| ||||||||||||||||||||||||||    
T  20437127 tgatgattctgaggggaa-tgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatct 20437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 41112094 - 41111977
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||    
T  41112094 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  41111995 ggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 32651682 - 32651563
Alignment:
Q  13 gtgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataat 111  Q
    |||||| ||||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||    
T  32651682 gtgagaagaacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataat 32651584  T
Q  112 ttctgaaaattgacctaattg 132  Q
    ||||||||||||| |||||||    
T  32651583 ttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 18712851 - 18712790
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712851 ggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 19663520 - 19663572
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663520 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 10811786 - 10811839
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811786 ggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 20805373 - 20805320
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805373 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 11158145 - 11158093
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158145 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 20851136 - 20851187
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851136 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 20857763 - 20857814
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857763 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 21706327 - 21706276
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706327 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 21710869 - 21710818
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710869 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 350 - 149
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  350 aaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  163 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 262  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  || ||||||    
T  251 ggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgat 153  T
Q  263 cata 266  Q
    ||||    
T  152 cata 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 10199 - 10374
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  10199 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 10298  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  10299 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 10374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 1529 - 1704
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 169  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  1529 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 1628  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  1629 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 1704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 63 - 265
Target Start/End: Complemental strand, 18229 - 18026
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18229 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggtta 18130  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg 260  Q
     ||||||||||||||||| | ||||| | ||||||| || |||||||||   ||||||| | |||| |||||||||||||||| || ||||| |||||||    
T  18129 aggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtg 18031  T
Q  261 atcat 265  Q
    |||||    
T  18030 atcat 18026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 1039 - 904
Alignment:
Q  15 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 114  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1039 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 940  T
Q  115 tgaaaattgacctaattgcttagttttggaaaataa 150  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  939 tgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 8184 - 8049
Alignment:
Q  15 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 114  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8184 gagaagaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 8085  T
Q  115 tgaaaattgacctaattgcttagttttggaaaataa 150  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  8084 tgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 899 - 846
Alignment:
Q  213 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 8044 - 7991
Alignment:
Q  213 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 7991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 63 - 207
Target Start/End: Complemental strand, 30917 - 30772
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||    
T  30917 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatta 30818  T
Q  162 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 207  Q
    |||||| ||||||||| ||| |||||| | |||| |||| ||||||    
T  30817 gggtttgatgatgattttgaggggaatggtgtaacgatcatgttaa 30772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 1728 - 1845
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  1728 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 1826  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  1827 ggtttgatgatgattctga 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 5751 - 5868
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  5751 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 5849  T
Q  163 ggtttaatgatgattctga 181  Q
    ||||| |||||||||||||    
T  5850 ggtttgatgatgattctga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 264
Target Start/End: Original strand, 3296 - 3490
Alignment:
Q  71 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  ||||||||||||||||||| |    
T  3296 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttga 3395  T
Q  170 tgatgattctgaagggaattgggtaatg-atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatca 264  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||   ||||||| | ||||||||||||||| |||||||| |  || |||||||||||    
T  3396 tgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatca 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 3625 - 3800
Alignment:
Q  71 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 169  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  3625 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 3724  T
Q  170 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 246  Q
    |||||||||||| ||| | |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  3725 tgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 116998 - 116887
Alignment:
Q  21 aacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaa 119  Q
    |||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  116998 aacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 116900  T
Q  120 attgacctaattg 132  Q
    ||||| |||||||    
T  116899 attgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 45278 - 45386
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 169  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  45278 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 45376  T
Q  170 tgatgattct 179  Q
    ||||||||||    
T  45377 tgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 16872 - 16811
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16872 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 11 - 72
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  11 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 13684 - 13623
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13684 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 101931 - 101992
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101931 ggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 17695 - 17643
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17695 ggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 40535 - 40587
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40535 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 135525 - 135473
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135525 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 22596 - 22646
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 121  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22596 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 34279 - 34331
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34279 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

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Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 12349 - 12296
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12349 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 1438 - 1378
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 131  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1438 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

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Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 15000 - 15052
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 123  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  15000 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 3558 - 3519
Alignment:
Q  227 tcagaatgaaaacttaatctttgttgctgctgtgatcata 266  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcata 3519  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 39510 - 39563
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39510 ggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 1501 - 1453
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaa 119  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1501 ggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 1916 - 1967
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1916 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 9387 - 9336
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9387 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 10290 - 10239
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10290 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 135489 - 135438
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    |||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135489 ggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 493032 - 493082
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 122  Q
    ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493032 ggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 774 - 680
Alignment:
Q  63 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 156  Q
    ||||||| |||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  774 aaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

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Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 5861 - 5922
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 132  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5861 ggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 2631 - 2684
Alignment:
Q  71 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 124  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2631 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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