View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21211_low_1 (Length: 241)
Name: NF21211_low_1
Description: NF21211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21211_low_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 32 - 228
Target Start/End: Original strand, 33599216 - 33599412
Alignment:
| Q |
32 |
tattgaacccgcaacactaaaaagatgacattgcccatgaatattcacataattaaacattaaaaatatatcaaaataatcaacaaataggaaaatactt |
131 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33599216 |
tattgaacccacaacactaaaaagatgacattgcccatgaatattcacataattaaacattaaaaatatatcaaaataatcaacaaataggaaaatactt |
33599315 |
T |
|
| Q |
132 |
gtgttcggatagcttgttcataaagggagttacatcagcctccaaagctgacatgtgtctaaatggatttttagccttgcaccaacaatatgtatca |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
33599316 |
gtgttcggatagcttgttcataaagggagttacatcagcctccaaagctgacatgtgtctaaatggatttttagccctgcaccaacaatatgtatca |
33599412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University