View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21213_high_31 (Length: 389)
Name: NF21213_high_31
Description: NF21213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21213_high_31 |
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Alignment Details
Target: chr8 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 7 - 374
Target Start/End: Complemental strand, 45025413 - 45025046
Alignment:
| Q |
7 |
gagagatgaaggtatagcaagcctaaggaaaacaaagagatcctgcagagctctctttgaaaaccctgtccatgtttgtttacaagtagaagaaaatttt |
106 |
Q |
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| T |
45025413 |
gagagctgaaggtatagcaagtctaaggaaaacaaagagatcctgcagagctctctttgaaaaccctgtccatgtttgtttacaagtagaagaaaatttt |
45025314 |
T |
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| Q |
107 |
acatagagtgaaatcaacaacacattgacccaataacatatagaattggatatagctgcccctttacttccaagcttaaattcaaaaaccaaaagccaac |
206 |
Q |
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| T |
45025313 |
acatagagtgaaatcaacaacacattgacccaataacatatagaattggatatagctgcccctttacttccaagcttaaattcaaaaaccaaaagccaac |
45025214 |
T |
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| Q |
207 |
acaaaagggtatgaagcaaagctgcaatcccagaagttatcaccattgggaggacaatgttttgtgtttgcaagaacttgagaatgcactggagaggacc |
306 |
Q |
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| T |
45025213 |
acaaaagggtatgaagcaaagctgcaatcccagaagttatcaccattgggaggacaatgttttgtgtttgcaagaacttgagaatgcactggagaggacc |
45025114 |
T |
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| Q |
307 |
atatgcgaacaaactcggtatcagaaacaacgcgtatgaaccagcttccttggatatggctttgtcct |
374 |
Q |
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| T |
45025113 |
atatgcgaacaaactcggtatcagaaacaacgcgtatgaaccagcttccttggatatggctttgtcct |
45025046 |
T |
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