View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21213_high_44 (Length: 296)
Name: NF21213_high_44
Description: NF21213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21213_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 20 - 287
Target Start/End: Original strand, 42523297 - 42523564
Alignment:
| Q |
20 |
ggttgtcttcccaactccctggagtccagccaataaaatgacagtgggcccagttttggcaaaagtcaattccgagacctctccacccatcaattgtaca |
119 |
Q |
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| T |
42523297 |
ggttgtcttcccaactccctggagtccagccaataaaatgacagtgggcccagttttggcaaaagtcaattccgagacctctccacccatcaattgtaca |
42523396 |
T |
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| Q |
120 |
agttcatcatgaacaatctgcaaaacccaacaatcaacacccattttgttcttgtatggaacttcagtattcaaaaaataaatctagttgatgttatttt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42523397 |
agttcatcatgaacaatctgcaaaacccaacaatcaacacccattttgttcttgtatggaacttcagtattcaaaaaataaatctagttgatgttatttt |
42523496 |
T |
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| Q |
220 |
atttcatgcaaacaagttctctcacttgcacaatgttataaagaaaaaccacaaatatacattcattt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
42523497 |
atttcatgcaaacaagttctctcacttgcacaatgttataaagaaaaaccacaaatatacagtcattt |
42523564 |
T |
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