View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21213_high_65 (Length: 240)
Name: NF21213_high_65
Description: NF21213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21213_high_65 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 33135060 - 33135282
Alignment:
| Q |
3 |
ttggttttgatgaaacatcagcaaaattacatggcaatgttatttggcactcttgttgattcatacaaattctctgctttaacaaatcttgaccgtctga |
102 |
Q |
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| T |
33135060 |
ttggttttgatgaaacatcagcaaaattacatggcaatgttatttggcactcttgttgattcatacgaattctctgctttaacaaatcttgacagtctga |
33135159 |
T |
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| Q |
103 |
tttaaatccatggttgagtttgtttaacatttaaatctgtctcattcgatctggattcaatggtcaagagtcactactgtgtgtaactgtttgtgttatt |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
33135160 |
tttaaatccatggttgagtttgtttaacatttaaatctgtctcattcgatctggattcaatggtcaagagtcacgactgtgtgtaactgtttgtgttatt |
33135259 |
T |
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| Q |
203 |
tgaagtaaccgtgagattatatt |
225 |
Q |
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| T |
33135260 |
tgaagtaaccgtgagattatatt |
33135282 |
T |
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