View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21213_high_73 (Length: 236)
Name: NF21213_high_73
Description: NF21213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21213_high_73 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 27884554 - 27884334
Alignment:
| Q |
1 |
tcaacgacggcgttgatgtaatttccatttcaatcggcggcggagatggtatagcttcaccttactatctcgacccgattgcaatcggatcttacggtgc |
100 |
Q |
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| T |
27884554 |
tcaacgacggcgttgatgtaatttctatttcaatcggcggcggagatggtatagcttcaccttactatctcgacccgattgcaatcggatcttacggtgc |
27884455 |
T |
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| Q |
101 |
tgtttcaagaggagttttcgtttcatcctccgccggaaacgatggaccaagtggaatgtcagtaaccaaccttgctccgtggttaacaaccgtaggagca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |
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| T |
27884454 |
tgtttcaagaggagttttcgtttcatcctccgccggaaacgatggaccaagtggaatgtcagtaaccaacctcgctccatggttaacaaccgtaggagca |
27884355 |
T |
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| Q |
201 |
ggcactatagatcgtgatttt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
27884354 |
ggcactatagatcgtgatttt |
27884334 |
T |
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