View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21213_low_44 (Length: 298)

Name: NF21213_low_44
Description: NF21213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21213_low_44
NF21213_low_44
[»] chr7 (71 HSPs)
chr7 (20-286)||(18512461-18512727)
chr7 (20-149)||(2541027-2541157)
chr7 (20-147)||(21172017-21172143)
chr7 (20-147)||(42391108-42391234)
chr7 (20-145)||(7879639-7879765)
chr7 (20-147)||(10693081-10693207)
chr7 (24-147)||(33871922-33872045)
chr7 (20-145)||(47716460-47716588)
chr7 (20-147)||(11617596-11617724)
chr7 (20-147)||(48735130-48735257)
chr7 (20-147)||(32758260-32758386)
chr7 (19-127)||(38604546-38604655)
chr7 (20-145)||(42805525-42805653)
chr7 (20-147)||(19426898-19427025)
chr7 (20-147)||(27629633-27629761)
chr7 (20-147)||(11741794-11741920)
chr7 (20-147)||(31591117-31591243)
chr7 (32-147)||(34626228-34626343)
chr7 (20-145)||(35334824-35334948)
chr7 (21-147)||(19265814-19265939)
chr7 (23-145)||(40463878-40464000)
chr7 (20-95)||(27889324-27889399)
chr7 (20-147)||(29907418-29907545)
chr7 (20-145)||(42798670-42798796)
chr7 (21-147)||(18747485-18747613)
chr7 (31-147)||(13805101-13805217)
chr7 (22-145)||(38262206-38262330)
chr7 (20-147)||(43557471-43557602)
chr7 (41-145)||(46354195-46354302)
chr7 (33-147)||(19266449-19266564)
chr7 (21-147)||(32233144-32233270)
chr7 (23-114)||(23231589-23231681)
chr7 (26-142)||(8148960-8149077)
chr7 (34-136)||(2662958-2663058)
chr7 (21-146)||(23419683-23419809)
chr7 (20-114)||(35787277-35787371)
chr7 (30-147)||(48123502-48123620)
chr7 (22-147)||(47077865-47077989)
chr7 (21-147)||(16341277-16341405)
chr7 (21-147)||(28362155-28362281)
chr7 (24-140)||(39123896-39124018)
chr7 (67-147)||(6736889-6736969)
chr7 (37-147)||(7644955-7645066)
chr7 (41-134)||(1408469-1408563)
chr7 (24-146)||(42476873-42476994)
chr7 (76-147)||(12473303-12473375)
chr7 (36-147)||(14099030-14099142)
chr7 (36-147)||(14409047-14409159)
chr7 (20-147)||(22698975-22699106)
chr7 (21-142)||(21566439-21566562)
chr7 (32-145)||(28078152-28078265)
chr7 (32-147)||(35203438-35203556)
chr7 (24-95)||(45018935-45019010)
chr7 (25-114)||(21139761-21139850)
chr7 (22-94)||(36267827-36267900)
chr7 (42-142)||(15108427-15108527)
chr7 (89-145)||(18327035-18327091)
chr7 (89-147)||(7193084-7193143)
chr7 (92-147)||(42495916-42495971)
chr7 (21-135)||(22065599-22065713)
chr7 (37-100)||(33500560-33500625)
chr7 (23-98)||(13792161-13792237)
chr7 (22-90)||(23065935-23066003)
chr7 (24-63)||(42495874-42495913)
chr7 (32-139)||(44123642-44123749)
chr7 (27-106)||(3469190-3469271)
chr7 (20-54)||(36602540-36602574)
chr7 (22-147)||(14732831-14732958)
chr7 (65-145)||(23223679-23223760)
chr7 (78-142)||(43852047-43852111)
chr7 (23-55)||(25434112-25434144)
[»] chr3 (68 HSPs)
chr3 (20-147)||(26869728-26869855)
chr3 (20-145)||(40272820-40272946)
chr3 (20-147)||(13628798-13628928)
chr3 (20-145)||(22609789-22609914)
chr3 (22-145)||(45948848-45948972)
chr3 (20-147)||(1217111-1217237)
chr3 (32-146)||(46421055-46421172)
chr3 (23-144)||(6411833-6411954)
chr3 (24-147)||(26573148-26573272)
chr3 (20-147)||(22122925-22123051)
chr3 (20-139)||(31592878-31592996)
chr3 (20-147)||(39203537-39203663)
chr3 (20-146)||(29366728-29366857)
chr3 (20-145)||(13730610-13730738)
chr3 (32-147)||(54374365-54374482)
chr3 (25-147)||(34420656-34420780)
chr3 (32-147)||(8247707-8247825)
chr3 (20-128)||(54484730-54484840)
chr3 (20-147)||(5173727-5173856)
chr3 (20-142)||(16735467-16735589)
chr3 (20-147)||(516430-516561)
chr3 (24-140)||(10795435-10795554)
chr3 (20-145)||(52926227-52926344)
chr3 (21-147)||(53996574-53996702)
chr3 (20-145)||(7943013-7943139)
chr3 (20-147)||(12914043-12914171)
chr3 (20-136)||(14986989-14987108)
chr3 (32-147)||(33926104-33926220)
chr3 (21-105)||(34771373-34771457)
chr3 (62-145)||(54032609-54032693)
chr3 (20-114)||(15797276-15797369)
chr3 (43-123)||(47624087-47624167)
chr3 (20-123)||(45786222-45786328)
chr3 (21-147)||(45139487-45139614)
chr3 (20-106)||(353357-353445)
chr3 (31-147)||(30928166-30928283)
chr3 (62-145)||(4495714-4495798)
chr3 (20-146)||(7696900-7697020)
chr3 (20-114)||(49013481-49013578)
chr3 (20-93)||(25517178-25517251)
chr3 (32-114)||(9276318-9276400)
chr3 (21-147)||(19731023-19731150)
chr3 (85-147)||(10870025-10870087)
chr3 (32-147)||(25944490-25944607)
chr3 (65-147)||(45620881-45620965)
chr3 (21-136)||(55401208-55401325)
chr3 (32-147)||(9607224-9607342)
chr3 (21-147)||(19751599-19751726)
chr3 (22-90)||(829452-829521)
chr3 (59-146)||(29106571-29106659)
chr3 (21-146)||(44403564-44403691)
chr3 (20-74)||(24851309-24851363)
chr3 (26-135)||(43114882-43114994)
chr3 (21-147)||(52428479-52428614)
chr3 (76-147)||(1121289-1121361)
chr3 (20-72)||(30452892-30452944)
chr3 (20-67)||(10484624-10484671)
chr3 (20-114)||(26292386-26292479)
chr3 (78-147)||(39212011-39212081)
chr3 (21-114)||(50624962-50625056)
chr3 (87-147)||(12525428-12525489)
chr3 (77-139)||(21875042-21875106)
chr3 (20-57)||(47624211-47624248)
chr3 (24-106)||(31904868-31904951)
chr3 (24-106)||(33235595-33235676)
chr3 (71-147)||(26782387-26782464)
chr3 (69-114)||(31831253-31831297)
chr3 (20-53)||(40390357-40390390)
[»] scaffold0057 (4 HSPs)
scaffold0057 (20-145)||(46832-46958)
scaffold0057 (26-147)||(24786-24903)
scaffold0057 (25-133)||(43672-43780)
scaffold0057 (32-100)||(46727-46796)
[»] chr1 (81 HSPs)
chr1 (20-145)||(46991828-46991954)
chr1 (23-145)||(6925124-6925247)
chr1 (31-147)||(11596535-11596651)
chr1 (24-147)||(32632569-32632692)
chr1 (20-147)||(34725106-34725232)
chr1 (22-147)||(27474303-27474428)
chr1 (20-147)||(46247961-46248089)
chr1 (20-147)||(35005145-35005275)
chr1 (22-147)||(35253197-35253321)
chr1 (20-147)||(14617060-14617188)
chr1 (20-147)||(10668247-10668377)
chr1 (20-147)||(38478290-38478416)
chr1 (20-106)||(4349702-4349788)
chr1 (34-147)||(25468285-25468399)
chr1 (23-145)||(30395737-30395862)
chr1 (20-145)||(45402118-45402246)
chr1 (20-147)||(18944665-18944796)
chr1 (26-145)||(23768334-23768454)
chr1 (22-147)||(2435796-2435923)
chr1 (20-147)||(45812545-45812671)
chr1 (25-147)||(12126850-12126971)
chr1 (31-147)||(18724564-18724681)
chr1 (26-147)||(27201669-27201793)
chr1 (20-147)||(19414461-19414587)
chr1 (21-147)||(44485119-44485245)
chr1 (24-147)||(47214533-47214655)
chr1 (21-147)||(6983820-6983945)
chr1 (20-145)||(20004098-20004226)
chr1 (32-128)||(31382234-31382330)
chr1 (21-147)||(35117774-35117904)
chr1 (21-147)||(20036242-20036369)
chr1 (20-147)||(9939483-9939614)
chr1 (21-105)||(10378744-10378828)
chr1 (21-147)||(35019252-35019378)
chr1 (31-100)||(15505634-15505703)
chr1 (20-106)||(18741965-18742053)
chr1 (24-147)||(19701592-19701717)
chr1 (32-147)||(31272401-31272510)
chr1 (36-147)||(41319830-41319942)
chr1 (20-106)||(31442397-31442484)
chr1 (21-147)||(23371146-23371271)
chr1 (24-147)||(45264411-45264536)
chr1 (20-96)||(1517319-1517395)
chr1 (20-147)||(8197065-8197193)
chr1 (24-137)||(22324925-22325039)
chr1 (47-147)||(22930104-22930203)
chr1 (25-147)||(19974087-19974210)
chr1 (35-114)||(21910673-21910751)
chr1 (21-127)||(23796507-23796614)
chr1 (31-138)||(30682845-30682951)
chr1 (22-106)||(42304217-42304303)
chr1 (21-100)||(43768209-43768288)
chr1 (66-145)||(4430080-4430160)
chr1 (41-106)||(19932782-19932849)
chr1 (35-106)||(20982773-20982844)
chr1 (21-147)||(22327121-22327245)
chr1 (32-147)||(50811961-50812078)
chr1 (21-95)||(20999859-20999933)
chr1 (20-74)||(50606499-50606553)
chr1 (76-144)||(50760290-50760359)
chr1 (42-114)||(21723739-21723811)
chr1 (21-135)||(39214967-39215083)
chr1 (20-79)||(4587571-4587630)
chr1 (21-131)||(15511157-15511271)
chr1 (26-143)||(17470361-17470478)
chr1 (61-147)||(33223006-33223093)
chr1 (27-93)||(4430014-4430080)
chr1 (32-129)||(20169109-20169207)
chr1 (21-74)||(30555211-30555264)
chr1 (35-127)||(34148983-34149076)
chr1 (25-72)||(33594144-33594191)
chr1 (32-147)||(49722593-49722708)
chr1 (102-147)||(2435984-2436029)
chr1 (32-89)||(4249463-4249520)
chr1 (32-89)||(4249787-4249844)
chr1 (32-89)||(4250111-4250168)
chr1 (32-100)||(6358191-6358260)
chr1 (34-145)||(27136673-27136786)
chr1 (69-147)||(24564366-24564445)
chr1 (32-147)||(18335308-18335424)
chr1 (22-66)||(25554752-25554796)
[»] chr4 (89 HSPs)
chr4 (20-145)||(5648260-5648385)
chr4 (20-147)||(6430634-6430761)
chr4 (20-147)||(20224983-20225109)
chr4 (22-145)||(40915830-40915953)
chr4 (22-147)||(19027847-19027973)
chr4 (20-147)||(9832321-9832447)
chr4 (20-147)||(30639379-30639506)
chr4 (20-147)||(29207906-29208032)
chr4 (20-147)||(48598833-48598959)
chr4 (20-147)||(5306668-5306799)
chr4 (20-147)||(47443956-47444084)
chr4 (20-147)||(11054156-11054282)
chr4 (20-147)||(47528538-47528664)
chr4 (25-147)||(41018807-41018929)
chr4 (31-147)||(25463121-25463238)
chr4 (21-147)||(54175062-54175191)
chr4 (32-147)||(17043414-17043530)
chr4 (20-129)||(20639666-20639777)
chr4 (20-147)||(44363138-44363268)
chr4 (32-146)||(16911562-16911679)
chr4 (26-147)||(37494850-37494972)
chr4 (20-145)||(16408609-16408737)
chr4 (20-145)||(21646965-21647093)
chr4 (19-144)||(32478799-32478918)
chr4 (20-114)||(25629081-25629176)
chr4 (21-147)||(35567169-35567296)
chr4 (20-147)||(39077804-39077930)
chr4 (21-134)||(9987843-9987957)
chr4 (32-145)||(14983835-14983949)
chr4 (24-147)||(30690188-30690319)
chr4 (23-146)||(54730249-54730376)
chr4 (20-114)||(7909288-7909383)
chr4 (35-147)||(7385499-7385612)
chr4 (33-114)||(49796830-49796911)
chr4 (22-114)||(51865048-51865141)
chr4 (20-147)||(23501792-23501916)
chr4 (21-114)||(55766475-55766568)
chr4 (20-138)||(8473628-8473747)
chr4 (20-100)||(20225121-20225203)
chr4 (25-98)||(20908649-20908723)
chr4 (32-146)||(30581485-30581602)
chr4 (22-147)||(47441540-47441666)
chr4 (20-134)||(21489099-21489215)
chr4 (23-147)||(30496333-30496456)
chr4 (21-147)||(54967020-54967145)
chr4 (36-142)||(10277781-10277886)
chr4 (20-74)||(11394925-11394979)
chr4 (20-74)||(11404652-11404706)
chr4 (20-74)||(38755916-38755970)
chr4 (32-147)||(49938613-49938726)
chr4 (24-114)||(55830733-55830823)
chr4 (20-147)||(7038052-7038179)
chr4 (24-122)||(12711461-12711561)
chr4 (23-97)||(30352591-30352667)
chr4 (32-146)||(39029080-39029196)
chr4 (87-147)||(42164224-42164284)
chr4 (26-74)||(47482864-47482912)
chr4 (20-83)||(38786673-38786736)
chr4 (20-114)||(13256407-13256504)
chr4 (20-74)||(33836495-33836549)
chr4 (20-73)||(32484307-32484360)
chr4 (20-73)||(40553945-40553998)
chr4 (21-147)||(487135-487271)
chr4 (31-105)||(9037772-9037847)
chr4 (32-135)||(10660415-10660520)
chr4 (32-135)||(10874560-10874665)
chr4 (20-74)||(25388249-25388303)
chr4 (66-147)||(10379997-10380078)
chr4 (21-136)||(36589753-36589870)
chr4 (31-114)||(3580859-3580943)
chr4 (62-137)||(17079701-17079777)
chr4 (36-147)||(32629293-32629404)
chr4 (63-147)||(14590836-14590922)
chr4 (88-147)||(17315375-17315434)
chr4 (26-106)||(20405128-20405210)
chr4 (20-106)||(36816392-36816479)
chr4 (20-62)||(35532077-35532119)
chr4 (32-73)||(44718641-44718682)
chr4 (21-74)||(50555665-50555718)
chr4 (28-139)||(23914342-23914452)
chr4 (88-147)||(43035247-43035307)
chr4 (21-105)||(16494259-16494345)
chr4 (76-134)||(51420586-51420645)
chr4 (20-69)||(12666865-12666914)
chr4 (76-144)||(25343189-25343258)
chr4 (21-74)||(28494224-28494277)
chr4 (102-147)||(54640430-54640475)
chr4 (26-74)||(8820581-8820629)
chr4 (103-147)||(41549381-41549425)
[»] chr8 (56 HSPs)
chr8 (20-145)||(28817634-28817760)
chr8 (20-145)||(44530150-44530276)
chr8 (20-145)||(13160703-13160828)
chr8 (20-145)||(45071266-45071391)
chr8 (20-147)||(12670258-12670384)
chr8 (24-145)||(36720797-36720919)
chr8 (22-147)||(31457172-31457297)
chr8 (20-144)||(12625891-12626017)
chr8 (20-147)||(18164768-18164895)
chr8 (20-147)||(30454105-30454231)
chr8 (20-147)||(39461002-39461132)
chr8 (32-145)||(8897784-8897898)
chr8 (20-145)||(29521693-29521819)
chr8 (20-145)||(35261680-35261806)
chr8 (20-145)||(7136535-7136663)
chr8 (21-140)||(5135299-5135418)
chr8 (20-147)||(20284077-20284209)
chr8 (20-147)||(21070705-21070838)
chr8 (22-147)||(389642-389770)
chr8 (21-142)||(8483947-8484069)
chr8 (20-145)||(6760823-6760951)
chr8 (20-147)||(17823575-17823703)
chr8 (24-147)||(2626518-2626645)
chr8 (31-142)||(24365078-24365191)
chr8 (24-106)||(29877135-29877217)
chr8 (25-147)||(44781517-44781642)
chr8 (20-145)||(26954133-26954262)
chr8 (35-147)||(20869523-20869632)
chr8 (22-137)||(5689640-5689756)
chr8 (24-147)||(22598156-22598279)
chr8 (49-147)||(35105922-35106022)
chr8 (20-145)||(25250523-25250651)
chr8 (20-106)||(10857870-10857956)
chr8 (20-114)||(20869955-20870052)
chr8 (25-105)||(19729382-19729462)
chr8 (20-103)||(26457773-26457854)
chr8 (20-145)||(28407417-28407530)
chr8 (26-147)||(42083712-42083835)
chr8 (20-86)||(26102578-26102644)
chr8 (21-145)||(44742527-44742653)
chr8 (20-106)||(16225060-16225148)
chr8 (53-147)||(23000260-23000352)
chr8 (20-72)||(27507985-27508037)
chr8 (25-135)||(17250888-17251001)
chr8 (33-147)||(11000970-11001086)
chr8 (20-74)||(16013529-16013583)
chr8 (32-147)||(24245450-24245564)
chr8 (20-74)||(35107319-35107373)
chr8 (20-57)||(27468100-27468137)
chr8 (23-68)||(40444845-40444890)
chr8 (33-147)||(14017989-14018105)
chr8 (62-114)||(23286375-23286426)
chr8 (86-147)||(30962847-30962909)
chr8 (59-106)||(43942365-43942414)
chr8 (20-73)||(36486574-36486627)
chr8 (76-147)||(36918123-36918195)
[»] chr5 (61 HSPs)
chr5 (20-145)||(24448891-24449017)
chr5 (20-145)||(41014320-41014445)
chr5 (20-147)||(32703423-32703549)
chr5 (20-147)||(38879580-38879710)
chr5 (20-147)||(8169992-8170118)
chr5 (25-136)||(19142956-19143067)
chr5 (20-147)||(35710312-35710438)
chr5 (21-143)||(43574609-43574732)
chr5 (20-147)||(43334201-43334331)
chr5 (32-145)||(22600455-22600569)
chr5 (20-145)||(4619112-4619240)
chr5 (26-122)||(2838803-2838899)
chr5 (24-124)||(7097772-7097872)
chr5 (32-147)||(27328751-27328869)
chr5 (22-147)||(1850639-1850764)
chr5 (20-131)||(7368413-7368523)
chr5 (20-114)||(16880655-16880750)
chr5 (21-146)||(208936-209062)
chr5 (20-137)||(13801775-13801895)
chr5 (20-100)||(34154822-34154902)
chr5 (22-147)||(42924840-42924970)
chr5 (20-87)||(16957374-16957441)
chr5 (23-147)||(12006339-12006466)
chr5 (34-145)||(1405188-1405300)
chr5 (20-147)||(1565430-1565558)
chr5 (21-131)||(5873331-5873441)
chr5 (20-147)||(30006324-30006452)
chr5 (21-147)||(39301122-39301249)
chr5 (21-114)||(29334427-29334522)
chr5 (40-142)||(41425952-41426055)
chr5 (21-90)||(12575669-12575739)
chr5 (21-106)||(3771380-3771465)
chr5 (32-147)||(28516453-28516570)
chr5 (21-132)||(24903705-24903817)
chr5 (22-74)||(25622533-25622585)
chr5 (20-127)||(20135623-20135733)
chr5 (60-147)||(22907913-22908000)
chr5 (21-91)||(13774921-13774991)
chr5 (26-147)||(18426038-18426160)
chr5 (31-135)||(24323724-24323829)
chr5 (31-135)||(24360348-24360453)
chr5 (82-147)||(37024626-37024690)
chr5 (23-74)||(21784343-21784394)
chr5 (87-145)||(23974781-23974840)
chr5 (32-74)||(10306494-10306536)
chr5 (24-96)||(12477132-12477205)
chr5 (20-72)||(39801591-39801643)
chr5 (20-71)||(16028632-16028683)
chr5 (24-106)||(31694120-31694202)
chr5 (23-147)||(22861680-22861802)
chr5 (34-74)||(21542489-21542529)
chr5 (41-120)||(37225990-37226070)
chr5 (89-147)||(22025542-22025601)
chr5 (20-71)||(30877572-30877623)
chr5 (20-63)||(32354211-32354254)
chr5 (25-97)||(3176770-3176839)
chr5 (34-147)||(34074584-34074698)
chr5 (21-97)||(11657708-11657785)
chr5 (20-69)||(29184069-29184118)
chr5 (118-146)||(9794466-9794494)
chr5 (76-147)||(22187284-22187356)
[»] chr2 (69 HSPs)
chr2 (20-145)||(8455324-8455450)
chr2 (20-147)||(10546161-10546290)
chr2 (20-149)||(9671178-9671306)
chr2 (24-145)||(14444730-14444851)
chr2 (20-147)||(10543697-10543827)
chr2 (22-147)||(12023929-12024054)
chr2 (20-147)||(14530317-14530447)
chr2 (20-147)||(21779269-21779395)
chr2 (20-145)||(17668003-17668129)
chr2 (20-145)||(25249746-25249871)
chr2 (26-147)||(17896258-17896381)
chr2 (20-145)||(25079725-25079852)
chr2 (20-147)||(23397765-23397891)
chr2 (20-145)||(17623565-17623691)
chr2 (20-130)||(36871509-36871618)
chr2 (20-145)||(39914314-39914440)
chr2 (22-147)||(25641501-25641626)
chr2 (31-147)||(32781307-32781424)
chr2 (22-145)||(11514437-11514560)
chr2 (20-147)||(24200631-24200761)
chr2 (21-147)||(17380247-17380372)
chr2 (43-144)||(22371059-22371158)
chr2 (24-147)||(19977726-19977850)
chr2 (22-145)||(24859998-24860120)
chr2 (23-145)||(5841029-5841154)
chr2 (31-147)||(33795284-33795401)
chr2 (22-147)||(26684630-26684758)
chr2 (49-147)||(5450284-5450384)
chr2 (31-147)||(21377092-21377209)
chr2 (32-147)||(99285-99399)
chr2 (24-131)||(30826052-30826158)
chr2 (20-99)||(40762242-40762321)
chr2 (50-147)||(23145736-23145834)
chr2 (50-147)||(23557526-23557624)
chr2 (20-145)||(40416879-40417005)
chr2 (25-98)||(24890460-24890533)
chr2 (24-113)||(39499242-39499331)
chr2 (21-106)||(44643564-44643649)
chr2 (21-147)||(4516360-4516487)
chr2 (20-106)||(25632550-25632636)
chr2 (22-131)||(30864427-30864536)
chr2 (32-145)||(13245115-13245220)
chr2 (24-147)||(19614991-19615116)
chr2 (20-147)||(27573620-27573747)
chr2 (20-74)||(23488556-23488610)
chr2 (32-106)||(31821363-31821437)
chr2 (20-73)||(40579757-40579810)
chr2 (36-147)||(44449407-44449519)
chr2 (206-262)||(14516960-14517015)
chr2 (27-137)||(15296421-15296533)
chr2 (20-72)||(34766330-34766382)
chr2 (24-147)||(7214533-7214659)
chr2 (32-147)||(31158459-31158577)
chr2 (32-147)||(45235837-45235954)
chr2 (20-73)||(41409936-41409989)
chr2 (20-72)||(34080176-34080228)
chr2 (93-145)||(44604855-44604907)
chr2 (32-83)||(24059016-24059067)
chr2 (76-147)||(29419949-29420025)
chr2 (24-74)||(14544139-14544189)
chr2 (76-145)||(17705496-17705566)
chr2 (20-57)||(124922-124959)
chr2 (20-57)||(22371202-22371239)
chr2 (22-82)||(31525771-31525831)
chr2 (32-147)||(44521393-44521509)
chr2 (24-67)||(8575975-8576018)
chr2 (68-147)||(2003592-2003673)
chr2 (32-74)||(19185763-19185805)
chr2 (59-147)||(12315699-12315787)
[»] scaffold0258 (2 HSPs)
scaffold0258 (20-147)||(13032-13159)
scaffold0258 (102-141)||(16733-16772)
[»] chr6 (46 HSPs)
chr6 (20-147)||(29355863-29355993)
chr6 (20-147)||(1346963-1347089)
chr6 (20-147)||(1354765-1354891)
chr6 (20-147)||(12221922-12222053)
chr6 (24-147)||(9161122-9161247)
chr6 (20-147)||(2166418-2166548)
chr6 (20-147)||(2178051-2178181)
chr6 (25-147)||(7947384-7947508)
chr6 (23-141)||(33138838-33138957)
chr6 (20-147)||(3815085-3815213)
chr6 (20-128)||(26097178-26097285)
chr6 (32-136)||(32579436-32579540)
chr6 (23-145)||(1941856-1941979)
chr6 (20-128)||(25557743-25557850)
chr6 (21-147)||(13904990-13905115)
chr6 (20-146)||(18277201-18277328)
chr6 (59-146)||(28007628-28007714)
chr6 (25-147)||(23240837-23240958)
chr6 (21-147)||(12889425-12889553)
chr6 (20-84)||(13267788-13267852)
chr6 (34-146)||(14553511-14553626)
chr6 (37-147)||(15866064-15866173)
chr6 (36-145)||(22967172-22967287)
chr6 (36-145)||(23821106-23821221)
chr6 (20-147)||(17432339-17432475)
chr6 (23-90)||(23930138-23930205)
chr6 (20-74)||(6808468-6808522)
chr6 (82-147)||(17448323-17448389)
chr6 (32-147)||(24097580-24097692)
chr6 (22-147)||(3116139-3116259)
chr6 (85-142)||(4136590-4136648)
chr6 (20-74)||(12885986-12886040)
chr6 (20-74)||(12892082-12892136)
chr6 (20-89)||(383768-383837)
chr6 (79-147)||(8409242-8409311)
chr6 (40-148)||(15865885-15865993)
chr6 (21-72)||(10734914-10734965)
chr6 (22-72)||(11395836-11395886)
chr6 (23-147)||(20400666-20400791)
chr6 (20-74)||(14975098-14975152)
chr6 (39-106)||(24734683-24734752)
chr6 (20-65)||(30786382-30786427)
chr6 (42-136)||(11849063-11849159)
chr6 (74-106)||(14341132-14341164)
chr6 (21-109)||(18254556-18254644)
chr6 (24-147)||(32728169-32728292)
[»] scaffold0311 (1 HSPs)
scaffold0311 (20-145)||(10811-10937)
[»] scaffold1176 (1 HSPs)
scaffold1176 (24-147)||(1599-1721)
[»] scaffold0168 (1 HSPs)
scaffold0168 (20-147)||(30578-30704)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-137)||(48642-48758)
[»] scaffold0223 (1 HSPs)
scaffold0223 (24-147)||(11130-11252)
[»] scaffold0187 (2 HSPs)
scaffold0187 (20-147)||(10058-10184)
scaffold0187 (20-147)||(20386-20512)
[»] scaffold0049 (1 HSPs)
scaffold0049 (20-147)||(58976-59106)
[»] scaffold0180 (1 HSPs)
scaffold0180 (22-99)||(24143-24220)
[»] scaffold0954 (1 HSPs)
scaffold0954 (23-114)||(3576-3668)
[»] scaffold0018 (1 HSPs)
scaffold0018 (24-142)||(72879-72999)
[»] scaffold0036 (1 HSPs)
scaffold0036 (62-145)||(35067-35152)
[»] scaffold0254 (1 HSPs)
scaffold0254 (49-147)||(4156-4258)
[»] scaffold0167 (1 HSPs)
scaffold0167 (31-139)||(23606-23715)
[»] scaffold0867 (1 HSPs)
scaffold0867 (62-142)||(3719-3798)
[»] scaffold0005 (1 HSPs)
scaffold0005 (63-147)||(226456-226542)
[»] scaffold0050 (1 HSPs)
scaffold0050 (34-82)||(58651-58699)
[»] scaffold0194 (1 HSPs)
scaffold0194 (24-99)||(24696-24771)


Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 286
Target Start/End: Original strand, 18512461 - 18512727
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18512461 acccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 18512560  T
Q  120 ttttcaggacttgaacccgtgacctttccaactatcatcgcaatctataatcatgaaatgattcagcagtctttctcnnnnnnncgacaggttgcatcct 219  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||    
T  18512561 tttccaggacttgaacccgtgacctttccaactatcatcgcaatctataatcacgaaatgattcagcagtctttctctttttttcgacaggttgcatcct 18512660  T
Q  220 ttgcaaactaggttggttttgccttttcatttggcaatgactacacttcttaaatcatactattctg 286  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18512661 ttgcaaactaggttggtgttgccttttcatttggcaatgactacacttcttaaatcatactattctg 18512727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 2541027 - 2541157
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||| | |    
T  2541027 acccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggct 2541126  T
Q  119 gttttcaggacttgaacccgtgacctttcca 149  Q
    |||| ||||||||||||||||||||||||||    
T  2541127 gtttccaggacttgaacccgtgacctttcca 2541157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 21172017 - 21172143
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  21172017 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 21172115  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  21172116 tttccaggacttgaacccgtgacctttc 21172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 42391108 - 42391234
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  42391108 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaagctg 42391206  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  42391207 tttccaggacttgaacccgtgacctttc 42391234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 7879765 - 7879639
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |  |||||||||||||  ||    
T  7879765 acccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagatt 7879666  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||||||||||||||||||||||    
T  7879665 gtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 10693081 - 10693207
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||| |||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  10693081 acccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-cttttacacaagaggctg 10693179  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  10693180 tttccaggacttgaacccgtgacctttc 10693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 33871922 - 33872045
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| ||||||| ||||||| ||||||| || |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||     
T  33871922 ggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttc 33872021  T
Q  124 caggacttgaacccgtgacctttc 147  Q
    ||||||||||||||| ||||||||    
T  33872022 caggacttgaacccgcgacctttc 33872045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 47716588 - 47716460
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| |    
T  47716588 acccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagg 47716489  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||||||||||||    
T  47716488 ctgtttccaggacttgaacccgtgacctt 47716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 11617596 - 11617724
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| |||| ||| ||||||||||||||| | |||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||| |||    
T  11617596 acccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggtt 11617695  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||| ||||||||||    
T  11617696 gtttccaggacttgaacctgtgacctttc 11617724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 48735130 - 48735257
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |  |||||||||||| ||||    
T  48735130 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgt-gttttacacaagaggttg 48735228  T
Q  120 ttttc-aggacttgaacccgtgacctttc 147  Q
    ||| | |||||||||||||||||||||||    
T  48735229 tttccaaggacttgaacccgtgacctttc 48735257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 32758386 - 32758260
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||  |||||||||||| | ||    
T  32758386 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccct-gttttacacaagaggctg 32758288  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||| ||||||||||    
T  32758287 tttccaggacttgaacctgtgacctttc 32758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 38604655 - 38604546
Alignment:
Q  19 cacccggtgcacc-aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgt 117  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |     
T  38604655 cacccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggc 38604556  T
Q  118 tgttttcagg 127  Q
    ||||| ||||    
T  38604555 tgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 42805653 - 42805525
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||||||  | |||||||||||| ||||||||||||  ||||||||||||| |    
T  42805653 acccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagagg 42805554  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||||||||||||    
T  42805553 ctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 19426898 - 19427025
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgtt 118  Q
    |||||||||||  |||||| |||||| ||||||||||  ||||| |||||||||| |||||||||||||||| ||||||||| ||||||||||||| | |    
T  19426898 acccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggct 19426996  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||||||||||||    
T  19426997 gtttccaggacttgaacccgtgacctttc 19427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 27629761 - 27629633
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||||||||||  ||||| ||||||| |||||| |||| |||||||||||||||| |||||||| |||||| |||||||||  ||||||||||||| | |    
T  27629761 acccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggct 27629662  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||||||||||||    
T  27629661 gtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 11741920 - 11741794
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||  ||||  ||||| ||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||| | ||    
T  11741920 acccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttacccta-ttttacactagaagctg 11741822  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||||||| |||||||||    
T  11741821 ttttcaggacttgaacccatgacctttc 11741794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 31591117 - 31591243
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||| ||||||| ||||||||||||||||   |||||||||||||||||||| ||  |||||||||||| ||||    
T  31591117 acccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactct-gttttacacaagaggttg 31591215  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| |||||||||||| |||||||||||    
T  31591216 tttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 34626228 - 34626343
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    |||||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||||| |||||||||| || | ||||| ||||||||    
T  34626228 aaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggactt 34626327  T
Q  132 gaacccgtgacctttc 147  Q
    ||| | ||| ||||||    
T  34626328 gaatctgtggcctttc 34626343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 35334824 - 35334948
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||  ||||||||| |||   |    
T  35334824 acccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacacgaga--ct 35334921  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| |||||||||||| |||||||||    
T  35334922 gtttccaggacttgaactcgtgacctt 35334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 19265939 - 19265814
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    |||||||||| ||||||||| |||| | ||| ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||  | |||    
T  19265939 cccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttttacacaagcggctgt 19265841  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
     | || |||||||||||||||||||||    
T  19265840 atccaagacttgaacccgtgacctttc 19265814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 40464000 - 40463878
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttt 122  Q
    ||||||||  ||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||  |||||||||||||   |||||    
T  40464000 cggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtttttacacaagagactgttt 40463901  T
Q  123 tcaggacttgaacccgtgacctt 145  Q
      | |||||||||||||||||||    
T  40463900 ctatgacttgaacccgtgacctt 40463878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 27889324 - 27889399
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagcctt 95  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27889324 acccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 29907545 - 29907418
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctattttt-acacaagatgt 117  Q
    ||||||||||| |||||||||||||||  ||||||||| | ||||||||||||||  ||||||||| |||||||||||| |||||||| |||||||| |     
T  29907545 acccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacacaagaggc 29907448  T
Q  118 tgttttcaggacttgaacccgtgacctttc 147  Q
    |||||  |||||||||||||||||||||||    
T  29907447 tgtttctaggacttgaacccgtgacctttc 29907418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 42798796 - 42798670
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||| ||||| | |||||||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||||||| |  |||||||||||||   |    
T  42798796 acccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagact 42798697  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| || |||||||||||||||||||    
T  42798696 gtttccaagacttgaacccgtgacctt 42798670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 18747613 - 18747485
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct--atttttacacaagatgtt 118  Q
    |||||||||| |||||||||||||||||||||| | | |||||||||||||| | |||||||| ||||||||||||||||   ||||||||||| | | |    
T  18747613 cccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggct 18747514  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| || ||||||| |||||||||||||    
T  18747513 gtttccaagacttgatcccgtgacctttc 18747485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 13805217 - 13805101
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggact 130  Q
    ||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||| |||||||||||   |||||||| ||| | | ||| |||||||    
T  13805217 caaagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggact 13805118  T
Q  131 tgaacccgtgacctttc 147  Q
    ||||||||| |||||||    
T  13805117 tgaacccgttacctttc 13805101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 38262206 - 38262330
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgt 120  Q
    ||||||||| ||||||||||||||||||| || ||| ||||||||||| |||| ||||||||||| ||| | ||||| || |||||||||||||   |||    
T  38262206 ccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgt 38262305  T
Q  121 tttcaggacttgaacccgtgacctt 145  Q
    || ||||||||||||||||||||||    
T  38262306 ttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 43557602 - 43557471
Alignment:
Q  20 acccggtgcaccaaa-gctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagat 115  Q
    ||||||||||| ||| |||||||||||||||| |||||| | |||||||||||||  | |||||||||||||||||||||| ||  |||||||||||||     
T  43557602 acccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagag 43557503  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    | ||||| |||||||||||||| |||||||||    
T  43557502 gctgtttccaggacttgaacccatgacctttc 43557471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 46354302 - 46354195
Alignment:
Q  41 gcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaaccc 137  Q
    ||||| || |||||||| ||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 46354203  T
Q  138 gtgacctt 145  Q
    ||||||||    
T  46354202 gtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 19266564 - 19266449
Alignment:
Q  33 aagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggactt 131  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||  ||||||| ||||  | | ||||||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggactt 19266465  T
Q  132 gaacccgtgacctttc 147  Q
    ||||||  ||||||||    
T  19266464 gaacccacgacctttc 19266449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 32233144 - 32233270
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    ||||||||||  |||||||| |||| |||||||  || ||||  |||||||||| |||||| | ||||| |||||||||| ||||||||||||| |||||    
T  32233144 cccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttacacaagaggttgt 32233243  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    || |||||||||||||| |||||||||    
T  32233244 ttccaggacttgaacccatgacctttc 32233270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 23231681 - 23231589
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaaga 114  Q
    |||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  23231681 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaaga 23231589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 8148960 - 8149077
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt--acacaagatgttgtttt 123  Q
    ||||| ||| ||| |||||||||| | || || |||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||| || |||||    
T  8148960 tgcactaaaactctcgcatacgcaag-tctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagtttt 8149058  T
Q  124 caggacttgaacccgtgac 142  Q
    |||||||||||| ||||||    
T  8149059 caggacttgaactcgtgac 8149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 2662958 - 2663058
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttga 133  Q
    |||||||||||| |||||||| |  ||||| |||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||    
T  2662958 agctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttacccta-ttttacacaagaggctgtttccaggacttga 2663055  T
Q  134 acc 136  Q
    |||    
T  2663056 acc 2663058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 23419683 - 23419809
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||| ||||| ||||| |||||| ||||| ||||  | |||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||| | ||    
T  23419683 cccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctg 23419782  T
Q  120 ttttcaggacttgaacccgtgaccttt 146  Q
    ||| ||| ||||||||| |||||||||    
T  23419783 tttccagaacttgaacctgtgaccttt 23419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 35787277 - 35787371
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||||||||   ||||||||||||||||| ||||||| |||||||||| ||||| ||||||||||||||| ||||||| | |||||||||||||    
T  35787277 acccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtttttacacaaga 35787371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 48123502 - 48123620
Alignment:
Q  30 ccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatt-tttacacaagatgttgttttcagga 128  Q
    ||||| |||||||||| ||| ||||| | |||||||||||||||| ||||||||||| ||||  ||||||| || ||||||||||| | ||||| |||||    
T  48123502 ccaaacctcccgcatatgcatggtccagaaaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccagga 48123601  T
Q  129 cttgaacccgtgacctttc 147  Q
    ||||||||| |||||||||    
T  48123602 cttgaacccatgacctttc 48123620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 47077865 - 47077989
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||||| | |||||||||||| | |||||  || ||||||||||||||||  |||||||||||||| | |||| ||| ||||||||||||   ||||    
T  47077865 ccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactcta-ttttacacaagagactgtt 47077963  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | ||||||||||||||||||||||||    
T  47077964 tccaggacttgaacccgtgacctttc 47077989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 16341405 - 16341277
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctattttt-acacaagatgtt 118  Q
    ||||||||||||||||||||||||| |   ||||||| ||| || |||||||||  ||||||||||||| ||||||||||| ||||| |||||||| | |    
T  16341405 cccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacacaagaggct 16341306  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    ||||  || ||||||||||||||||||||    
T  16341305 gtttctagaacttgaacccgtgacctttc 16341277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 28362155 - 28362281
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacc-ctatttttacacaagatgttg 119  Q
    |||||||||| ||||||||| |||| ||| |||| || |||||||||||||||| |||||||||||||||||||||||    ||||||||||||| |  |    
T  28362155 cccggtgcac-aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcag 28362253  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    |||  |||||||||||| ||||||||||    
T  28362254 tttctaggacttgaacctgtgacctttc 28362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 39124018 - 39123896
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagcct----taccctatttttacacaagatgt 117  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||  || |||||||| ||||||||||    |||||| |||||||||||||       
T  39124018 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 39123919  T
Q  118 tgttttcaggacttgaacccgtg 140  Q
     ||||  ||||||||||||||||    
T  39123918 cgtttctaggacttgaacccgtg 39123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 6736969 - 6736889
Alignment:
Q  67 ccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||| ||||||||||| |||| |||||| | |||||| |||||| |||||||| |||||||||||||||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttc 6736889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 7645066 - 7644955
Alignment:
Q  37 tcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaa 134  Q
    |||||||||||||||||| || |||||||||||| |||  ||||||||||||||   |||||||| ||||| |||||||| | ||||| |||||||||||    
T  7645066 tcccgcatacgcagggtcagg-aaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaa 7644968  T
Q  135 cccgtgacctttc 147  Q
    |||||||||||||    
T  7644967 cccgtgacctttc 7644955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 1408563 - 1408469
Alignment:
Q  41 gcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaa 134  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||| |||||||||| |  ||||||||||||| | | ||| |||||||||||    
T  1408563 gcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 42476994 - 42476873
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| | |||||||||||| |||| | |  | |||||||||||||||| ||||||||||||||||||||| |||  ||||||||||||   |||||     
T  42476994 ggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagcctta-ccttgttttacacaagagactgtttc 42476896  T
Q  124 caggacttgaacccgtgaccttt 146  Q
    ||| ||||||| |||||||||||    
T  42476895 cagaacttgaatccgtgaccttt 42476873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 12473375 - 12473303
Alignment:
Q  76 ggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||| ||||||||| ||||| |||||||| ||||||| |||||||||||||| |||||||||    
T  12473375 ggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttc 12473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 14099030 - 14099142
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaa 134  Q
    |||| ||||||| ||||| ||| |||||||||||||||| |||||||||||||||| |||| |||  ||||||||||| | | | ||| |||||||| ||    
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaa 14099129  T
Q  135 cccgtgacctttc 147  Q
    ||| |||||||||    
T  14099130 cccatgacctttc 14099142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 14409047 - 14409159
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaa 134  Q
    |||| ||||||| ||||| ||| |||||||||||||||| |||||||||||||||| |||| |||  ||||||||||| | | | ||| |||||||| ||    
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaa 14409146  T
Q  135 cccgtgacctttc 147  Q
    ||| |||||||||    
T  14409147 cccatgacctttc 14409159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 22698975 - 22699106
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtcc-ggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagat 115  Q
    ||||||||||| | ||||||||||||| |||||||| || || |||||||||||  || |||||||||||||||| ||||||||  |||||||||||||     
T  22698975 acccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagag 22699074  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
      | ||| |||||||||||||| | |||||||    
T  22699075 actatttccaggacttgaacccataacctttc 22699106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 21566562 - 21566439
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||||||||| |||||||||||||| ||||||| ||| ||||||||| |||| || |||||||||||||||| ||| | ||  ||||||||||||| |      
T  21566562 cccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcg 21566463  T
Q  119 gttttcaggacttgaacccgtgac 142  Q
    |||| || |||||||||| |||||    
T  21566462 gtttccaagacttgaacctgtgac 21566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 28078152 - 28078265
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    ||||||| |||||| ||||| | ||| |||||||||||||||| ||||||||| | ||| ||||||||| |||||  ||| ||   |||||  |||||||    
T  28078152 aaagctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggactt 28078251  T
Q  132 gaacccgtgacctt 145  Q
    ||||||||||||||    
T  28078252 gaacccgtgacctt 28078265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 35203556 - 35203438
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcagga 128  Q
    |||||||||||||||| || || | | ||||| ||||||||||   ||| |||||||||||| |||| ||| ||||| ||||||||   ||||| |||||    
T  35203556 aaagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccagga 35203457  T
Q  129 cttgaacccgtgacctttc 147  Q
    |||||||||||||||||||    
T  35203456 cttgaacccgtgacctttc 35203438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 45018935 - 45019010
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca----ttcggtgtattgtacgcagcctt 95  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||||||    || ||| ||||||||||||||||    
T  45018935 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcagcctt 45019010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 21139761 - 21139850
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    |||||| |||||| |||||||| ||| || ||| |||||||||||||||| |||||| ||||  || |||||| || |||||||||||||    
T  21139761 gtgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctgtttttacacaaga 21139850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 36267827 - 36267900
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaag-gggtcccaccattcggtgtattgtacgcagcct 94  Q
    ||||||||| ||||||||||||||| |||||| ||| ||  |||||| |||||| |||||||||||||||||||    
T  36267827 ccggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgcagcct 36267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 15108427 - 15108527
Alignment:
Q  42 catacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtga 141  Q
    ||||| ||||||  || ||||| |||||| ||| | |||||||||| |||||||||| | |||||||||||||   ||||| |||||||||||| |||||    
T  15108427 catacacagggtttgggaagggatcccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaactcgtga 15108526  T
Q  142 c 142  Q
    |    
T  15108527 c 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 18327091 - 18327035
Alignment:
Q  89 cagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    |||||||||||| ||||||||||||| | ||||| | ||||||||||||||||||||    
T  18327091 cagccttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgacctt 18327035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 7193143 - 7193084
Alignment:
Q  89 cagccttaccctatt-tttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||| |||| ||||||||||| |||||||  |||||||||||||||||||||||    
T  7193143 cagccttaccatattgtttacacaagaggttgtttcgaggacttgaacccgtgacctttc 7193084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 42495916 - 42495971
Alignment:
Q  92 ccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||| |||||| |||||| | ||||| ||||||||||||||||||||||||    
T  42495916 ccttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttc 42495971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 22065713 - 22065599
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    |||||| ||| ||| |||| |||||| ||  || ||| |||||||| ||| ||| | | ||||||| ||||| ||||||||||||||||||||| |||||    
T  22065713 cccggtacactaaaactcctgcatacacatagttcgggaaggggtctcactatttgctttattgtatgcagctttaccctatttttacacaagaggttgt 22065614  T
Q  121 tttcaggacttgaac 135  Q
    || ||  ||||||||    
T  22065613 ttccaaaacttgaac 22065599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 33500625 - 33500560
Alignment:
Q  37 tcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct 100  Q
    ||||||||||||||||||||| ||||||||||||||  ||  |||||| |||||||| ||||||||    
T  33500625 tcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccct 33500560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 13792161 - 13792237
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttacc 98  Q
    |||||||| |||||||| ||||||||||||| ||  |||||||||| ||| || ||||||||||| |||| ||||||    
T  13792161 cggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccatttgggtgtattgtatgcagtcttacc 13792237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 23065935 - 23066003
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgca 90  Q
    ||||||||||||||||||| |||| ||||| | ||| ||||| ||||| |||  |||||||||||||||    
T  23065935 ccggtgcaccaaagctcccacatatgcaggattcggaaagggatcccatcatatggtgtattgtacgca 23066003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 42495874 - 42495913
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggg 63  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  42495874 ggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 44123642 - 44123749
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    |||||||| |||||||||| |||||  || ||||||||  ||  ||||||||  | ||| ||||||| | ||||||||||||| | ||||| ||| ||||    
T  44123642 aaagctcctgcatacgcagtgtccgagaacgggtcccattatatggtgtatttcatgcaaccttaccttgtttttacacaagaggctgtttccagtactt 44123741  T
Q  132 gaacccgt 139  Q
    ||||||||    
T  44123742 gaacccgt 44123749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 3469190 - 3469271
Alignment:
Q  27 gcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctattttt 106  Q
    |||| ||||||||||||||| |||||||  | |||||||||| |||  || ||||||||||||||| || |||||| |||||    
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgttttt 3469271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 36602574 - 36602540
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtc 54  Q
    ||||||||||| |||||||||||||||||||||||    
T  36602574 acccggtgcactaaagctcccgcatacgcagggtc 36602540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 14732831 - 14732958
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt-acacaagatgtt 118  Q
    ||||||||| ||||||||||||||  |||||| ||| |||| ||  |||||||   ||||||||| ||||||||||||||| ||||| |||   || | |    
T  14732831 ccggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggct 14732929  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| |||||||||||||| |||| ||||    
T  14732930 gtttccaggacttgaacccatgacttttc 14732958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 23223760 - 23223679
Alignment:
Q  65 tcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    |||||||||||| ||||||||||||| |||||   || ||||||||||||| | | |||||||||||  |||| ||||||||    
T  23223760 tcccaccattcgatgtattgtacgcaaccttattttattttttacacaagaggctcttttcaggactctaacctgtgacctt 23223679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 43852111 - 43852047
Alignment:
Q  78 tgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgac 142  Q
    ||||||||||  ||||||||||| ||||| ||| |||| ||| |||||||||||||||||||||||    
T  43852111 tgtattgtacatagccttaccctgttttttacagaagaggtt-ttttcaggacttgaacccgtgac 43852047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 25434144 - 25434112
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtcc 55  Q
    |||||||| ||||||||||||||||||||||||    
T  25434144 cggtgcactaaagctcccgcatacgcagggtcc 25434112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 26869855 - 26869728
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| | ||    
T  26869855 acccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaccagaggctg 26869756  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||| ||||||||||    
T  26869755 tttccaggacttgaacctgtgacctttc 26869728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 40272820 - 40272946
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||    
T  40272820 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggtt 40272919  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| |||||||||||||| |||||||    
T  40272920 gtttccaggacttgaacccatgacctt 40272946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 13628798 - 13628928
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccctattt-ttacacaagatg 116  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||| ||| |||||||||| |    
T  13628798 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagagg 13628897  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||||||||    
T  13628898 ctgtttccaggacttgaacccgtgacctttc 13628928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 22609914 - 22609789
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||    
T  22609914 acccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 22609815  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| || ||||||||||||| |||||    
T  22609814 tttccaagacttgaacccgttacctt 22609789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 45948848 - 45948972
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgt 120  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  121 tttcaggacttgaacccgtgacctt 145  Q
    || ||||| ||||||||||||||||    
T  45948948 ttccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 1217237 - 1217111
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  1217237 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 1217139  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  1217138 tttccaggacttgaacccgtgacctttc 1217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 46421055 - 46421172
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| | ||||| |||||    
T  46421055 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagga 46421154  T
Q  129 cttgaacccgtgaccttt 146  Q
    ||||||||||||||||||    
T  46421155 cttgaacccgtgaccttt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 6411833 - 6411954
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttt 122  Q
    |||||||| |||||||||||||||||| |||| || ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| | |||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 6411932  T
Q  123 tcaggacttgaacccgtgacct 144  Q
     || ||||||||||| ||||||    
T  6411933 acaagacttgaacccatgacct 6411954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 26573272 - 26573148
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttt 122  Q
    ||||||| ||||||| |||||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||  |||||||||| || | |||||    
T  26573272 ggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgttt 26573173  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     ||||||||||||||||||||||||    
T  26573172 ccaggacttgaacccgtgacctttc 26573148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 22122925 - 22123051
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | ||||| |||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||   ||    
T  22122925 acccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagagactg 22123023  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||| ||||||||    
T  22123024 tttccaggacttgaacccgcgacctttc 22123051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 31592996 - 31592878
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  31592996 acccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 31592898  T
Q  120 ttttcaggacttgaacccgt 139  Q
    ||| ||||||||||||||||    
T  31592897 tttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 39203663 - 39203537
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||  |||||||||||| | ||    
T  39203663 acccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccct-gttttacacaagaggctg 39203565  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    |||  |||||||||||| ||||||||||    
T  39203564 tttcaaggacttgaacctgtgacctttc 39203537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 29366728 - 29366857
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    |||| |||||| ||||||||| |||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||  |||||| |||||| |    
T  29366728 acccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagagg 29366827  T
Q  117 ttgttttcaggacttgaacccgtgaccttt 146  Q
     ||||| |||||||||||||||||||||||    
T  29366828 ctgtttccaggacttgaacccgtgaccttt 29366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 13730610 - 13730738
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||||||  | |||||||||||| ||||||||||||  ||||||||||||| |    
T  13730610 acccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagagg 13730709  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||||||||||||    
T  13730710 ctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 54374365 - 54374482
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttacccta-tttttacacaagatgttgttttcaggac 129  Q
    |||||||||||||| ||||||||||| |||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||||| || |||    
T  54374365 aaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagac 54374464  T
Q  130 ttgaacccgtgacctttc 147  Q
    ||||||| ||||||||||    
T  54374465 ttgaacctgtgacctttc 54374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 34420656 - 34420780
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttt 122  Q
    |||||| ||||||||| |||||||| ||||||| |||||||||||||| || ||||||| |||||||||||||||||  ||||||||||||| | |||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     ||||||||||||||||||||||||    
T  34420756 ccaggacttgaacccgtgacctttc 34420780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 8247707 - 8247825
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||||||||||||| |||| ||||||||||  | ||||||||||||||| |||||||||  ||||||||||||| | ||||| |||||    
T  8247707 aaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagga 8247806  T
Q  129 cttgaacccgtgacctttc 147  Q
    |||||||||||||||||||    
T  8247807 cttgaacccgtgacctttc 8247825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 54484840 - 54484730
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacc--ctatttttacacaagatgt 117  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||   | ||||||||||||| |     
T  54484840 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaagaggc 54484741  T
Q  118 tgttttcagga 128  Q
    ||||| |||||    
T  54484740 tgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 5173727 - 5173856
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctatttttacacaagatgt 117  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||   ||||||||| | ||| ||||||  | ||||||||||||| ||    
T  5173727 acccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtttttacacaagaggt 5173826  T
Q  118 tgttttcaggacttgaacccgtgacctttc 147  Q
    ||||| ||||||||||||||||||||||||    
T  5173827 tgtttccaggacttgaacccgtgacctttc 5173856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 16735589 - 16735467
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||| ||||||  ||||| |||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||  |||||| | ||    
T  16735589 acccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctacaagaggctg 16735490  T
Q  120 ttttcaggacttgaacccgtgac 142  Q
    |||  ||||||||||||||||||    
T  16735489 tttcgaggacttgaacccgtgac 16735467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 516561 - 516430
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca---ttcggtgtattgtacgcagccttaccct-atttttacacaagat 115  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||| |||   || ||| |||||| ||||||||||||||  |||||||||||||     
T  516561 acccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacacaagag 516462  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    | ||||| ||||||||||||||||||||||||    
T  516461 gctgtttccaggacttgaacccgtgacctttc 516430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 10795435 - 10795554
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgt 120  Q
    |||||||  ||||||||||||||||||||||| | ||||||||||||||  || ||||||||||||||||||||||||| | |||||||||||| | |||    
T  10795435 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 10795534  T
Q  121 tttcaggacttgaacccgtg 140  Q
    || |||||||||||||||||    
T  10795535 ttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 52926227 - 52926344
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||| | |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||        ||||||||| | ||    
T  52926227 acccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac--------tacacaagaggctg 52926318  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| ||||||||||||||||||||||    
T  52926319 tttccaggacttgaacccgtgacctt 52926344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 53996574 - 53996702
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||||||||| ||||||||| ||||||||| ||| || |||||||||||||| || ||||||||||| |||||||||||||  ||||||||||||| |||    
T  53996574 cccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggtt 53996673  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| || ||||||||| |||||||||||    
T  53996674 gtttccacgacttgaacacgtgacctttc 53996702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 7943139 - 7943013
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||| |||||| |||||||||||||||||| |||| || ||||| |||||||||| | |||||||||||||| ||||||||  |||||| |||||||| |    
T  7943139 acccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgct 7943040  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||||||||||| ||||||||||    
T  7943039 gtttccaggacttgaatccgtgacctt 7943013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 12914043 - 12914171
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||   ||||||||||||| |||||||| || |||||||| ||||||| |||||||||||||| ||||||||||  ||||||||||||| | |    
T  12914043 acccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggct 12914142  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||  ||||||||||    
T  12914143 gtttccaggacttgaacttgtgacctttc 12914171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 14987108 - 14986989
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| ||| ||||||| || ||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| |    
T  14987108 acccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagg 14987009  T
Q  117 ttgttttcaggacttgaacc 136  Q
     ||||| |||||||||||||    
T  14987008 ctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 33926220 - 33926104
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggact 130  Q
    ||||||| |||||| ||||||||| | ||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||| | | ||| |||||||    
T  33926220 aaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccaggact 33926121  T
Q  131 tgaacccgtgacctttc 147  Q
    ||||||| |||||||||    
T  33926120 tgaacccatgacctttc 33926104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 34771373 - 34771457
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt 105  Q
    |||||||||| | |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  34771373 cccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 54032609 - 54032693
Alignment:
Q  62 gggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 15797369 - 15797276
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||||||||| | ||||||| |||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  15797369 acccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaaga 15797276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 47624167 - 47624087
Alignment:
Q  43 atacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  47624167 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttt 47624087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 45786222 - 45786328
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||||||||||||  || |||||||||||||||||||||||||  ||||||||||||| |    
T  45786222 acccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagagg 45786321  T
Q  117 ttgtttt 123  Q
     ||||||    
T  45786322 ctgtttt 45786328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 45139487 - 45139614
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctat-ttttacacaagatgt 117  Q
    |||||||||| |||| ||||||||||||||| || || ||||||||||||||||   ||||||||||| ||||||||||||| | |||||||||||| ||    
T  45139487 cccggtgcac-aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggt 45139584  T
Q  118 tgttttcaggacttgaacccgtgacctttc 147  Q
    ||||| ||  ||||||||||||||||||||    
T  45139585 tgtttccaaaacttgaacccgtgacctttc 45139614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 353357 - 353445
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||||||  | ||||||||||||||||||||||||| |||||    
T  353357 acccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 353445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 30928166 - 30928283
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcaggac 129  Q
    |||||||||| |||| ||||||||||| |||||||||| ||| | |||||||| ||| || ||||||| | |||| ||||||||| | ||||| ||||||    
T  30928166 caaagctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggac 30928265  T
Q  130 ttgaacccgtgacctttc 147  Q
    ||||||||||||||||||    
T  30928266 ttgaacccgtgacctttc 30928283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 4495714 - 4495798
Alignment:
Q  62 gggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||| | | | ||||||||||||||||||||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgacctt 4495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 7696900 - 7697020
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | ||||||| |||| |||| |||||| ||||||     ||||| |||||||||||||||||||||||||  ||||||||||||   ||    
T  7696900 acccggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccatttggtgtattgtacgcagccttaccct-gttttacacaagagactg 7696993  T
Q  120 ttttcaggacttgaacccgtgaccttt 146  Q
    ||| |||||||||||||||||||||||    
T  7696994 tttccaggacttgaacccgtgaccttt 7697020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 49013481 - 49013578
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    ||||||||||| ||||||||||| || || |||||||| |||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||    
T  49013481 acccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaaga 49013578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 25517178 - 25517251
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagcc 93  Q
    ||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||  |||||||||||||||||    
T  25517178 acccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagcc 25517251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 9276400 - 9276318
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    |||| ||||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||  |||||||||||||    
T  9276400 aaagttcccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaaga 9276318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 19731150 - 19731023
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||||| |||||||| |||||| ||| ||| || || ||||||||||| | ||||||||||||||| ||||||| |  ||||||||||||| | |     
T  19731150 cccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggcta 19731051  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||| | ||||||||||||    
T  19731050 tttccaggacttgcatccgtgacctttc 19731023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 10870025 - 10870087
Alignment:
Q  85 tacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||||    
T  10870025 tacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10870087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 25944607 - 25944490
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccc-tatttttacacaagatgttgttttcaggac 129  Q
    ||||||||| ||||||||||||| || |||||||||||||| || |||||||||||| ||||||| |||   ||||||||| ||| |  |||| ||||||    
T  25944607 aaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggac 25944508  T
Q  130 ttgaacccgtgacctttc 147  Q
    |||||||| |||||||||    
T  25944507 ttgaacccatgacctttc 25944490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 45620881 - 45620965
Alignment:
Q  65 tcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||| | ||||||||||||||||||||||||  | ||||||||||||| | ||||| ||| ||||||||||||||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttc 45620965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 55401325 - 55401208
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||||||||  |||||||||||||||| | ||||||  |||||||||||||| || |||||||| ||||||| |||| |||  ||||||||||||| | |    
T  55401325 cccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggct 55401226  T
Q  119 gttttcaggacttgaacc 136  Q
    |||| |||||||||||||    
T  55401225 gtttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 9607342 - 9607224
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcagga 128  Q
    |||||||||||||| || ||||| || ||||||||||| ||||   |||||||| ||||||||||||||||  ||||||| ||||| | ||||| |||||    
T  9607342 aaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccagga 9607243  T
Q  129 cttgaacccgtgacctttc 147  Q
    ||||||||  |||||||||    
T  9607242 cttgaaccgatgacctttc 9607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 19751726 - 19751599
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||||| |||||||  |||||| ||  ||| || || ||||||||||| | ||||||||||||||| ||||||| | |||||||||||||| | |     
T  19751726 cccggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggcta 19751627  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||| | ||||||||||||    
T  19751626 tttccaggacttgcatccgtgacctttc 19751599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 829452 - 829521
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgca 90  Q
    ||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || |||||||||||||||    
T  829452 ccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgca 829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 29106659 - 29106571
Alignment:
Q  59 aaggggtcccaccattcggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgaccttt 146  Q
    ||||| |||||| ||| ||||||||||||| | ||||| ||||||||| |||||||| |||||||||| |||||| |||||||| ||||    
T  29106659 aagggatcccacaatttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtgatcttt 29106571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 44403564 - 44403691
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggt-gtattgtacgcagccttaccctat-ttttacacaagatgtt 118  Q
    |||||||||| |||||| | ||||||| ||||||||| ||||||||||||||||  || ||||| | |||||||||||| | | |||||||||||| | |    
T  44403564 cccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggct 44403663  T
Q  119 gttttcaggacttgaacccgtgaccttt 146  Q
     ||  |||||||| |||| |||||||||    
T  44403664 attcccaggactttaacctgtgaccttt 44403691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 24851309 - 24851363
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||    
T  24851309 acccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatt 24851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 43114882 - 43114994
Alignment:
Q  26 tgcaccaaagctcccgcatacgca-gggtccggcaaggggtcccaccattcggtgtattgtacgcag-ccttaccc--tatttttacacaagatgttgtt 121  Q
    ||||| |||||||||||||||||| |||||| | || ||||||||||||| ||||||||||| | || ||||||||  | ||||||||||||| | ||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaa-gggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtt 43114980  T
Q  122 ttcaggacttgaac 135  Q
    | ||||||||||||    
T  43114981 tccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 52428479 - 52428614
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtc-------ccaccattcggtgtattgtacgcagccttaccctat-ttttacacaa 112  Q
    |||||||||| ||||||||| |||||| ||||||||  |||||||        |||| ||| ||||||||||||||||||||||||| | ||||||||||    
T  52428479 cccggtgcactaaagctcccacatacgtagggtccgagaaggggtttggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaa 52428578  T
Q  113 gatgttgttttcag-gacttgaacccgtgacctttc 147  Q
    || | || || ||| ||||| |||||||||||||||    
T  52428579 gaggctgcttccagagacttaaacccgtgacctttc 52428614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 1121289 - 1121361
Alignment:
Q  76 ggtgtattgtacgcagccttaccctattt-ttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||||| || ||| ||||| |||||||||| ||||||| |||||||| ||| |||||||||||    
T  1121289 ggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctttc 1121361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 30452944 - 30452892
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||||||||||    
T  30452944 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 10484624 - 10484671
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcc 67  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||    
T  10484624 acccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 26292479 - 26292386
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||||||||| | || ||||||||| ||||||| ||| ||||| ||||| |||| ||||||| |||||| | ||||||||  ||||||||||||    
T  26292479 acccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccct-gttttacacaaga 26292386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 39212081 - 39212011
Alignment:
Q  78 tgtattgtacgcagccttaccctatt-tttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||| |||||| | || ||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttc 39212011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 50624962 - 50625056
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt-tacacaaga 114  Q
    |||||||||| ||||||||| | ||||||||| || | |||| |||||||||   ||||||||||||||  ||||||||| |||| |||||||||    
T  50624962 cccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgctaccttacccttttttatacacaaga 50625056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 12525489 - 12525428
Alignment:
Q  87 cgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||| |||||||||||||| | ||||| ||||||| ||||| ||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttc 12525428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 21875106 - 21875042
Alignment:
Q  77 gtgtattgtacgcagccttaccctattttt--acacaagatgttgttttcaggacttgaacccgt 139  Q
    |||||||||||||||||||||||| |||||  |||||||| ||||||| ||| | ||||||||||    
T  21875106 gtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccgt 21875042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 47624248 - 47624211
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccgg 57  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  47624248 acccggtgcactaaagctcccgcatacgcagggtccgg 47624211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 31904868 - 31904951
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaagggg-tcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||| |||||||||||| ||| | | || || |||||| |||||||||| |||||||||||||||| | |||||| |||||    
T  31904868 ggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttt 31904951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 33235676 - 33235595
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||| |||||| ||||||||| | |||| | | |||||||||||||||  ||||||||||| ||| |||||||| |||||    
T  33235676 ggtgcactaaagcttccgcatacgtaaggtctg-cgaggggtcccaccatttagtgtattgtacacagtcttaccctgttttt 33235595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 26782464 - 26782387
Alignment:
Q  71 cattcggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||| |||||||| ||  |||| ||||||||||||| ||||||||  ||||||  |||||||||| ||||||||||||    
T  26782464 catttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttc 26782387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 31831297 - 31831253
Alignment:
Q  69 accattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||    
T  31831297 accatttggtgtattgtatgcagccttacccta-ttttacacaaga 31831253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 40390390 - 40390357
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggt 53  Q
    ||||||||||| ||||||||||||||||||||||    
T  40390390 acccggtgcactaaagctcccgcatacgcagggt 40390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 91; Significance: 4e-44; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 46958 - 46832
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgtt 118  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||    
T  46958 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaagaggtt 46859  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||| ||||||||||||||||||    
T  46858 gtttccagcacttgaacccgtgacctt 46832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 24786 - 24903
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttc 124  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||| | ||||       
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt--- 24882  T
Q  125 aggacttgaacccgtgacctttc 147  Q
      ||||||||||| |||||||||    
T  24883 --gacttgaacccatgacctttc 24903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 43780 - 43672
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccg-gcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    |||||| | |||||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||| |||  |||||||||||| | |||||     
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagcctta-ccttgttttacacaagacgctgtttc 43682  T
Q  124 caggacttga 133  Q
    ||| ||||||    
T  43681 cagaacttga 43672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 46727 - 46796
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct 100  Q
    ||||||||||||||||||||||| || |||||||||||||| || ||| ||||||| ||| |||||||||    
T  46727 aaagctcccgcatacgcagggtctgggaaggggtcccaccattttggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 46991954 - 46991828
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||    
T  46991954 acccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggtt 46991855  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||||||||||||||||||||||    
T  46991854 gtttccaggacttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 6925247 - 6925124
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgtt 121  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | | ||    
T  6925247 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatt 6925148  T
Q  122 ttcaggacttgaacccgtgacctt 145  Q
    | ||||||||||||||||||||||    
T  6925147 tccaggacttgaacccgtgacctt 6925124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 11596651 - 11596535
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggact 130  Q
    ||||||||||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||  ||||||    
T  11596651 caaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggact 11596552  T
Q  131 tgaacccgtgacctttc 147  Q
    |||||||||||| ||||    
T  11596551 tgaacccgtgacatttc 11596535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 32632569 - 32632692
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    |||||||  ||||||||||||| |||||||  || |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | |||||     
T  32632569 ggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 32632668  T
Q  124 caggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||||||||    
T  32632669 caggacttgaacccgtgacctttc 32632692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 34725106 - 34725232
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||  |||||||||||| | ||    
T  34725106 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccct-gttttacacaagaggctg 34725204  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  34725205 tttccaggacttgaacccgtgacctttc 34725232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 27474428 - 27474303
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||| |||||||||||||   ||||    
T  27474428 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttacacaagagactgtt 27474329  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | || |||||||||| ||||||||||    
T  27474328 tccaagacttgaacctgtgacctttc 27474303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 46247961 - 46248089
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||| | |    
T  46247961 acccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggct 46248060  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| || |||||||||||||||| ||||    
T  46248061 gtttccaagacttgaacccgtgacatttc 46248089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 35005275 - 35005145
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||  || ||||||||||| |||||||||||||  ||||||||||||| |    
T  35005275 acccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagagg 35005176  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     |||||||| |||||||||||||||||||||    
T  35005175 ctgttttcaagacttgaacccgtgacctttc 35005145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 35253197 - 35253321
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||||    
T  35253197 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctgtt 35253295  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    |  ||||||||||||||||| |||||    
T  35253296 tcgaggacttgaacccgtgatctttc 35253321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 14617188 - 14617060
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatt-tttacacaagatgtt 118  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||| ||||||| | || ||||||||||| | |    
T  14617188 acccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggct 14617089  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| |||||||||||| |||||||||||    
T  14617088 gtttccaggacttgaactcgtgacctttc 14617060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 10668377 - 10668247
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||||  | ||||||||||||||| ||||||| |  ||||||||||||| |    
T  10668377 acccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagagg 10668278  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||||||||    
T  10668277 ctgtttccaggacttgaacccgtgacctttc 10668247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 38478290 - 38478416
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||  ||||||| |||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  38478290 acccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 38478388  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    |||  |||||||||||||||||||||||    
T  38478389 tttctaggacttgaacccgtgacctttc 38478416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 4349788 - 4349702
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  4349788 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 4349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 25468285 - 25468399
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttg 132  Q
    ||||||||||||||||||||| || ||| ||||| |||||| ||||||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  133 aacccgtgacctttc 147  Q
    ||||| |||||||||    
T  25468385 aacccatgacctttc 25468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 30395737 - 30395862
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||| |||||||||||||| || |||||||| |||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| | ||    
T  30395737 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctg 30395836  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| ||||||||||||||||||||||    
T  30395837 tttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 45402246 - 45402118
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcag-cctt--accctatttttacacaagatg 116  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||  |||  ||||| ||||||||||||| |    
T  45402246 acccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctgtttttacacaagagg 45402147  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| |||||||||||||||| |||||    
T  45402146 ctgtttccaggacttgaacccgttacctt 45402118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 18944796 - 18944665
Alignment:
Q  20 acccggtgcaccaaa-gctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagat 115  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||     
T  18944796 acccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagag 18944697  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    | ||||| |||| |||||||| ||||||||||    
T  18944696 gctgtttccaggccttgaacctgtgacctttc 18944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 23768334 - 23768454
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttc 124  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||||||  ||||||||||||| | ||||| |    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcc 23768433  T
Q  125 aggacttgaacccgtgacctt 145  Q
    | |||||||||| ||||||||    
T  23768434 atgacttgaacctgtgacctt 23768454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 2435796 - 2435923
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccctattttt-acacaagatgttg 119  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||||||| || |||||||||||||||| |||||||||||||| ||||| || | ||    
T  2435796 ccggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctg 2435895  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  2435896 tttccaggacttgaacccgtgacctttc 2435923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 45812545 - 45812671
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| |||||||  || |||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||   ||    
T  45812545 acccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccct-cttttacacaagagactg 45812643  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||| ||||||||||    
T  45812644 ttttcaggacttgaacctgtgacctttc 45812671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 12126850 - 12126971
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttc 124  Q
    |||||| | |||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||||||||||  |||||||||||| | ||||| |    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccct-gttttacacaagaagctgtttcc 12126948  T
Q  125 aggacttgaacccgtgacctttc 147  Q
    || |||| |||||||||||||||    
T  12126949 agaacttaaacccgtgacctttc 12126971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 18724564 - 18724681
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggac 129  Q
    ||||||||||||||| | ||||||||| |||||||||||  ||| |||||||||||| ||||||||||||  ||||||||||||| | ||||| ||||||    
T  18724564 caaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggac 18724663  T
Q  130 ttgaacccgtgacctttc 147  Q
    ||||||||||||||||||    
T  18724664 ttgaacccgtgacctttc 18724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 27201793 - 27201669
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctattt-ttacacaagatgttgttt 122  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||| | |||||||| | |||||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgttt 27201694  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     |||||||||||||| |||||||||    
T  27201693 ccaggacttgaacccatgacctttc 27201669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 19414587 - 19414461
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||| |||  ||||||| |||| | |     
T  19414587 acccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacct-gttttacataagaggctc 19414489  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    |||  |||||||||||||||||||||||    
T  19414488 tttctaggacttgaacccgtgacctttc 19414461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 44485119 - 44485245
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttg 119  Q
    |||||||||| |||||||||||||||| ||| ||||| ||||||||| |||||| ||||||||||||||||||||||| | | |||||||||||  ||||    
T  44485119 cccggtgcac-aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttg 44485217  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| |||||||  |||||||||||||||    
T  44485218 tttccaggactataacccgtgacctttc 44485245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 47214655 - 47214533
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| | |||||||||||| |||||||| || |||||||||||||||| ||||||||||||||| |||||||||  ||||| ||||||   |||||     
T  47214655 ggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccct-gttttaaacaagagactgtttc 47214557  T
Q  124 caggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||||||||    
T  47214556 caggacttgaacccgtgacctttc 47214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 6983820 - 6983945
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||||||| |||||||||||||||  |||||||| |||||  | | || | |||    
T  6983820 cccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttt-tatacgaggctgt 6983918  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    || ||||||||||||| ||||||||||    
T  6983919 ttccaggacttgaacctgtgacctttc 6983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 20004098 - 20004226
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| || ||||| || |||||||||||||||  | ||||||||||||||||||||||| |  ||||||||| ||| |    
T  20004098 acccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagagg 20004197  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||||||||||||    
T  20004198 ctgtttccaggacttgaacccgtgacctt 20004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 31382234 - 31382330
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcagga 128  Q
    |||||||||||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| | ||||| |||||    
T  31382234 aaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 35117774 - 35117904
Alignment:
Q  21 cccggtgcaccaaagctcccgcat-acgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctat-ttttacacaagatg 116  Q
    |||||||||| |||||||| |||| ||||||||||||| ||||||||||| ||||   |||||||||||| |||||||||||| | |||||||||||| |    
T  35117774 cccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagagg 35117873  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     | ||| ||||||||||||||||||||||||    
T  35117874 ctatttccaggacttgaacccgtgacctttc 35117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 20036369 - 20036242
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgtt 118  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||| |||||||| ||||||||| |||||  |||||||  | | |||||||||||  ||    
T  20036369 cccggtgcacaaaa-ctcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagttt 20036271  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||||||||||||    
T  20036270 gtttccaggacttgaacccgtgacctttc 20036242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 9939614 - 9939483
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccg-gcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctattt-ttacacaagat 115  Q
    ||||||||||| ||||||||||||||||||||||||| | | ||||||||||||  || ||||||||| ||||| ||||||| | ||| ||| ||||||     
T  9939614 acccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagag 9939515  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||| |||||||||||| |||||||||||    
T  9939514 gttgtttccaggacttgaactcgtgacctttc 9939483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 10378744 - 10378828
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt 105  Q
    |||||||||| |||||||||||||| |||||||||   |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  10378744 cccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 35019378 - 35019252
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||||| ||||||| ||||||||||||||| || | |||||||||||| | ||||||||||| |||||||||  || ||||||| |||||| ||||    
T  35019378 cccggtgcactaaagctctcgcatacgcagggtctggga-ggggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttg 35019280  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||| | ||||||||||    
T  35019279 tttacaggacttgaatctgtgacctttc 35019252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 15505703 - 15505634
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||    
T  15505703 caaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 15505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 18741965 - 18742053
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||| ||||||| ||||||||||||||| || ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  18741965 acccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 18742053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 19701717 - 19701592
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttacc-ctatttttacacaagatgttgtt 121  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||||| || |||||||||||| || |||||||    ||||||||||||| | ||||    
T  19701717 ggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgtt 19701618  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||| |||||||||| ||||    
T  19701617 ttcatgacttaaacccgtgacatttc 19701592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 31272401 - 31272510
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    |||||||||||||||||||||||||| |      ||||||||| | |||  |||||||||||||||| | ||||||||||||| ||||||| ||||||||    
T  31272401 aaagctcccgcatacgcagggtccggaa------cccaccatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggactt 31272494  T
Q  132 gaacccgtgacctttc 147  Q
    ||||| ||||||||||    
T  31272495 gaacctgtgacctttc 31272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 41319830 - 41319942
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaa 134  Q
    |||||||||| | ||||| ||| ||||||||||| |||| |||||||||||||||||||||||||  |||||||||||||   ||||| |||||||| ||    
T  41319830 ctcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaa 41319929  T
Q  135 cccgtgacctttc 147  Q
    || ||||||||||    
T  41319930 cctgtgacctttc 41319942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 31442397 - 31442484
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||||||||||| || ||||||||||||||| ||||||||| |||||    
T  31442397 acccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgttttt 31442484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 23371271 - 23371146
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    |||||||||| |||||| || ||||||||||||| || ||||||||||| |||| |||||||||||| || |||| |||  ||||||| ||||  | |||    
T  23371271 cccggtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttggtgtattgtacacaaccttgcccgttttttacccaagtggctgt 23371173  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    ||  |||||||||||||||||||||||    
T  23371172 ttctaggacttgaacccgtgacctttc 23371146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 45264411 - 45264536
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgttgtt 121  Q
    ||||||| |||||||||||||| |||||||| |  |||||||||||||| || ||||||||| || ||||||||| ||  ||||| ||||||| ||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | ||||||||||||  ||||||||||    
T  45264511 tccaggacttgaacatgtgacctttc 45264536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 1517319 - 1517395
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagcctta 96  Q
    ||||||||||| |||||||| |||||||||||||| |  |||||||||||||| | |||||||||||||||||||||    
T  1517319 acccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagcctta 1517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 8197193 - 8197065
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||| ||| ||||||||  |||||||||||||||  ||||||||| |||||| |||||| |||||| ||||||||| |  ||||||||||||| |      
T  8197193 acccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacacaagaggca 8197094  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
     ||  ||||||||||||||||||||||||    
T  8197093 attaccaggacttgaacccgtgacctttc 8197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 22325039 - 22324925
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||| ||||||||||||||||||||||| || | ||||  ||||||||   ||||||||||| ||||||||||||| ||||||||||||| | ||||    
T  22325039 ggtgcactaaagctcccgcatacgcagggtcggg-acggggctccaccatttttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtt 22324941  T
Q  122 ttcaggacttgaaccc 137  Q
    | || |||||||||||    
T  22324940 tccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 22930104 - 22930203
Alignment:
Q  47 gcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgaccttt 146  Q
    ||||||||| | |||||||||||||||| |||||||||| | || ||||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||    
T  22930104 gcagggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgaccttt 22930202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 19974087 - 19974210
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    |||||| |||||||||||||||  || |||||| || |||||||| ||||  ||||||||||||||| |||| ||||||||||||||  || | |||||     
T  19974087 gtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaaccttgccctatttttacacttgaggctgtttc 19974186  T
Q  124 caggacttgaacccgtgacctttc 147  Q
    || ||||||||||||||| |||||    
T  19974187 caagacttgaacccgtgatctttc 19974210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 21910673 - 21910751
Alignment:
Q  35 gctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||||||| ||| ||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  21910673 gctcccgca-acgtagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttacataaga 21910751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 23796614 - 23796507
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||||| |||||||| ||||| |||||||| || |||||||| ||||||| ||||||||||||||| ||||||  | |||||||||||||| | ||    
T  23796614 cccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctg 23796515  T
Q  120 ttttcagg 127  Q
    ||| ||||    
T  23796514 tttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 30682951 - 30682845
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggact 130  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| | |||| ||||| ||  |||||| | ||||||||||||| | | ||||||||| |    
T  30682951 caaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgta-tgtacacaatcttaccttgtttttacacaagaggctattttcaggatt 30682853  T
Q  131 tgaacccg 138  Q
    ||||||||    
T  30682852 tgaacccg 30682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 42304217 - 42304303
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||||||  ||  |||||||||||||| ||||||||| |||||    
T  42304217 ccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 43768288 - 43768209
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct 100  Q
    |||||||||  |||||||||| |||||||||||| || |||||||||||||| | ||||||||||| |||||||||||||    
T  43768288 cccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccct 43768209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 4430080 - 4430160
Alignment:
Q  66 cccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    ||||||||| |||||||||||||||| ||||||||  ||||||||||||||  |||||||| ||||| |||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgacctt 4430160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 19932782 - 19932849
Alignment:
Q  41 gcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||||||||| ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  19932782 gcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 19932849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 20982773 - 20982844
Alignment:
Q  35 gctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||||||||||||||  ||| | |||||||||| ||||||||||  |||||||||||||||||||    
T  20982773 gctcccgcatacgcagggtccgagaagagatcccaccattaggtgtattgttggcagccttaccctattttt 20982844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 22327245 - 22327121
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctattttt-acacaagatgtt 118  Q
    |||||||||||||||||||||||||| ||| || ||| ||     |||||||||  |||| || |||| |||||||||||| ||||| |||||||| |||    
T  22327245 cccggtgcaccaaagctcccgcatacacagagttcgggaac----cccaccattttggtgcatcgtacacagccttaccctgttttttacacaagaggtt 22327150  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||| ||||||||    
T  22327149 gtttccaggacttgaacccgcgacctttc 22327121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 50812078 - 50811961
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccc--tatttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||||||||  ||| ||||||| |||||| || ||||||||||||||| ||||||||  | ||||||||||||| | ||||| |||||    
T  50812078 aaagctcccgcatacgcagggcgcgggaaggggt-ccaccattttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccagga 50811980  T
Q  129 cttgaacccgtgacctttc 147  Q
    | |||  ||||||||||||    
T  50811979 catgattccgtgacctttc 50811961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 20999859 - 20999933
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagcctt 95  Q
    |||||||||| ||||||||||| |||||||||| | | |||||| |||| |||| ||||||||||||||||||||    
T  20999859 cccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagcctt 20999933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 50606553 - 50606499
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  50606553 acccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatt 50606499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 50760290 - 50760359
Alignment:
Q  76 ggtgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcaggacttgaacccgtgacct 144  Q
    |||||||| |||||||||||||||  |||| ||||||||| | |||||||||||||||||||||||||||    
T  50760290 ggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 21723811 - 21723739
Alignment:
Q  42 catacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    |||||||||||||||| ||  ||| | |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  21723811 catacgcagggtccgggaaaaggttctaccatttggtgtattgtactcagccttaccctatttttatacaaga 21723739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 39214967 - 39215083
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccc-tatttttacacaagatgtt 118  Q
    |||||||||| |||||| || ||||||||||||  || |||||| ||||||| || ||  ||||||||||||||||||||   ||||||||||||| |||    
T  39214967 cccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaagaggtt 39215066  T
Q  119 gttttcaggacttgaac 135  Q
    |||| ||| ||||||||    
T  39215067 gtttccagtacttgaac 39215083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 4587571 - 4587630
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtg 79  Q
    |||||||||||  ||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  4587571 acccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatttggtg 4587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 15511157 - 15511271
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgta--cgcagccttaccct-atttttacacaagatg 116  Q
    |||||||||| ||||||| | |||||||||||||| | ||||||| |||||| || |||||||||||  ||||||||||||||  ||||||||||||| |    
T  15511157 cccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttacacaagagg 15511256  T
Q  117 ttgttttcaggactt 131  Q
      |||| ||||||||    
T  15511257 cggtttccaggactt 15511271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 17470361 - 17470478
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccct-atttttacacaagatgttgtttt 123  Q
    ||||| ||||||||| |||||||||| || || || ||||||||| |||  |||||||||||||||||||||||||  ||||||||||||| | |||||     
T  17470361 tgcactaaagctcccacatacgcagg-tcagg-aacgggtcccactattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttc 17470458  T
Q  124 caggacttgaacccgtgacc 143  Q
     ||||||||||||| |||||    
T  17470459 taggacttgaacccatgacc 17470478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 33223093 - 33223006
Alignment:
Q  61 ggggtcccaccattc-ggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||  ||||||||||||||| |||| |||| ||||||||||||| | ||||| || ||||| || ||||||||||||    
T  33223093 ggggtcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttc 33223006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 4430014 - 4430080
Alignment:
Q  27 gcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagcc 93  Q
    |||| ||||||||||||||| |||| ||| | ||||||| |||||||| ||||||||||||||||||    
T  4430014 gcactaaagctcccgcatacacaggatccagaaaggggttccaccatttggtgtattgtacgcagcc 4430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 20169109 - 20169207
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacc-ctatttttacacaagatgttgttttcaggac 129  Q
    |||||||||||||| ||||||||||| |||| ||||||||  | || ||||||||| ||| ||||||  | ||||||||||||| | ||||||||||||    
T  20169109 aaagctcccgcatatgcagggtccgggaaggagtcccaccgattggggtattgtacacagtcttacctttttttttacacaagagggtgttttcaggac 20169207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 30555264 - 30555211
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    |||||||||| ||||||| |||||||||||||||||  ||||||||||||||||    
T  30555264 cccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccatt 30555211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 34148983 - 34149076
Alignment:
Q  35 gctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcagg 127  Q
    ||||| ||||| ||||||||| | |||||||| ||||||| ||| | ||||||||| |||||||||||||| ||||||||| | ||||| ||||    
T  34148983 gctcctgcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttccagg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 33594144 - 33594191
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 49722593 - 49722708
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    |||||| || |||||||| |||  || ||||||| |||||| ||  | |||||||||||  ||||||||||| ||  |||||| ||||||| || |||||    
T  49722593 aaagctgccacatacgcaaggtttgggaaggggttccaccaatcaatatattgtacgcaatcttaccctattattttacaagaggttgtttacatgactt 49722692  T
Q  132 gaacccgtgacctttc 147  Q
     |||||||||||||||    
T  49722693 aaacccgtgacctttc 49722708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 2435984 - 2436029
Alignment:
Q  102 tttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttc 2436029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 4249463 - 4249520
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgc 89  Q
    ||||||||||||||| || ||| ||| ||||| |||||||||| ||||||||||||||    
T  4249463 aaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 4249787 - 4249844
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgc 89  Q
    ||||||||||||||| || ||| ||| ||||| |||||||||| ||||||||||||||    
T  4249787 aaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 4250111 - 4250168
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgc 89  Q
    ||||||||||||||| || ||| ||| ||||| |||||||||| ||||||||||||||    
T  4250111 aaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 6358260 - 6358191
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct 100  Q
    |||| ||| |||||||||||||| || |||||||||||||| || ||||| ||||||||||| |||||||    
T  6358260 aaagatcctgcatacgcagggtctgggaaggggtcccaccattttggtgttttgtacgcagctttaccct 6358191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 27136673 - 27136786
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcaggactt 131  Q
    ||||||||||||| || | ||  | ||||||||||||||||  ||||||||||||||| ||||||| | |||| ||||||||| ||||||  ||| ||||    
T  27136673 agctcccgcatacacatgatctaggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaactt 27136772  T
Q  132 gaacccgtgacctt 145  Q
    |||| |||| ||||    
T  27136773 gaactcgtgtcctt 27136786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 24564445 - 24564366
Alignment:
Q  69 accattcggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||| |||| |||||||||| ||||||||| ||||| |||||||| ||||||| || |||||||| | | ||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttc 24564366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 18335308 - 18335424
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggact 130  Q
    |||||||||| |||| || ||||  | || |||||||| |||| | ||||||||||||| | ||||||| ||||||| ||||||   ||||| |||||||    
T  18335308 aaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggact 18335407  T
Q  131 tgaacccgtgacctttc 147  Q
    | |||  ||||||||||    
T  18335408 ttaacttgtgacctttc 18335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 25554752 - 25554796
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtc 66  Q
    ||||||||| || ||||||||||||||||||| ||| ||||||||    
T  25554752 ccggtgcactaatgctcccgcatacgcagggttcgggaaggggtc 25554796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 5648385 - 5648260
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||| ||||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||    
T  5648385 acccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 5648286  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| ||||||||||||||||||||||    
T  5648285 tttccaggacttgaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 6430634 - 6430761
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||| | |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||    
T  6430634 acccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 6430733  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| || |||||||||||||||||||||    
T  6430734 tttccatgacttgaacccgtgacctttc 6430761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 20225109 - 20224983
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| ||||    
T  20225109 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggttg 20225011  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| |||||||||||||| |||||||||    
T  20225010 tttccaggacttgaacccatgacctttc 20224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 40915953 - 40915830
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    |||||||||  ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||| | ||||    
T  40915953 ccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtt 40915854  T
Q  122 ttcaggacttgaacccgtgacctt 145  Q
    | ||||||||||||||||||||||    
T  40915853 tccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 19027973 - 19027847
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgt 120  Q
    ||||||||| ||||||||| ||||||||| ||| || |||||||||||||| | |||||||||||||||||||||||||  |||||||||||||||||||    
T  19027973 ccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgt 19027874  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    || ||||||||||||||||||||||||    
T  19027873 ttccaggacttgaacccgtgacctttc 19027847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 9832321 - 9832447
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | || ||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  9832321 acccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 9832419  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||||||||||||    
T  9832420 ttttcaggacttgaacccgtgacctttc 9832447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 30639506 - 30639379
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||| |||||| |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||   ||    
T  30639506 acccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctg 30639407  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||| ||||||||||    
T  30639406 tttccaggacttgaaccagtgacctttc 30639379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 29207906 - 29208032
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| |       
T  29207906 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggcaa 29208004  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  29208005 tttccaggacttgaacccgtgacctttc 29208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 48598833 - 48598959
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||| ||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  48598833 acccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 48598931  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  48598932 tttccaggacttgaacccgtgacctttc 48598959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 5306668 - 5306799
Alignment:
Q  20 acccggtgcaccaaagctcccg----catacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagat 115  Q
    ||||||||||  ||||||||||    |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||     
T  5306668 acccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgattttacacaagag 5306767  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    | ||||| ||||||||||||||||||||||||    
T  5306768 gctgtttccaggacttgaacccgtgacctttc 5306799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 47444084 - 47443956
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||| ||||||  ||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||| ||||| | |    
T  47444084 acccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggct 47443985  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||||||||||||    
T  47443984 gtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 11054156 - 11054282
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||| || ||||| |||||||||||||||| ||||||||  ||||||||||||   ||    
T  11054156 acccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccct-gttttacacaagagactg 11054254  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||||||||||||    
T  11054255 ttttcaggacttgaacccgtgacctttc 11054282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 47528538 - 47528664
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | ||||||| ||||  |||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  47528538 acccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 47528636  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||| ||||||||||    
T  47528637 tttccaggacttgaacctgtgacctttc 47528664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 41018807 - 41018929
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttc 124  Q
    |||||| ||||| ||  |||||||| |||| || |||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||| ||||||| |    
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttcc 41018906  T
Q  125 aggacttgaacccgtgacctttc 147  Q
    |||||||||||||||||||||||    
T  41018907 aggacttgaacccgtgacctttc 41018929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 25463238 - 25463121
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc-tatttttacacaagatgttgttttcaggac 129  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||| |||| |||   ||||||||||||| ||||||| ||||||    
T  25463238 caaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggac 25463139  T
Q  130 ttgaacccgtgacctttc 147  Q
    ||||||||||||||||||    
T  25463138 ttgaacccgtgacctttc 25463121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 54175191 - 54175062
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggc-aaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttttacacaagatgtt 118  Q
    |||||||||| |||||||||||||| |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| | |    
T  54175191 cccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttacacaagaggct 54175092  T
Q  119 gtttt-caggacttgaacccgtgacctttc 147  Q
    ||||| ||||||||||| ||||||| ||||    
T  54175091 gttttccaggacttgaatccgtgacatttc 54175062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 17043414 - 17043530
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcaggact 130  Q
    |||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| | ||||| |||||||    
T  17043414 aaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggact 17043513  T
Q  131 tgaacccgtgacctttc 147  Q
    |||||| ||||||||||    
T  17043514 tgaacctgtgacctttc 17043530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 20639666 - 20639777
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgt 117  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||  ||||||||||||| |     
T  20639666 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaagaggc 20639765  T
Q  118 tgttttcaggac 129  Q
    ||||| ||||||    
T  20639766 tgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 44363138 - 44363268
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||  || ||||  |||||||||||| ||||||  |||||||||| || |    
T  44363138 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacacgagg 44363237  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     |||||||||||||||||| |||||||||||    
T  44363238 ctgttttcaggacttgaactcgtgacctttc 44363268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 16911679 - 16911562
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcagga 128  Q
    ||||||||||| |||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||| |||| ||||||||| | |||||  ||||    
T  16911679 aaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctagga 16911580  T
Q  129 cttgaacccgtgaccttt 146  Q
    ||||||||||||||||||    
T  16911579 cttgaacccgtgaccttt 16911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 37494972 - 37494850
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttc 124  Q
    ||||| |||||||| ||||||||||||||| | |||||||||||||||| ||| ||||||| ||| |||||||||  ||||||||||||| ||||||| |    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttcc 37494873  T
Q  125 aggacttgaacccgtgacctttc 147  Q
    |||||||||||| ||||||||||    
T  37494872 aggacttgaacctgtgacctttc 37494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 16408609 - 16408737
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| || |||||||| ||||||| |||||||  | |||||||||||||||| ||||||||  ||||||||||||| |    
T  16408609 acccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagagg 16408708  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||||||||||||    
T  16408709 ctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 21647093 - 21646965
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttacccta-tttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| || ||||| || |||||||||||||||  | ||| |||||||||||||||||||||| ||||||||||||| |    
T  21647093 acccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagagg 21646994  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||| ||||||||    
T  21646993 ctgtttccaggacttgaacctgtgacctt 21646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 32478799 - 32478918
Alignment:
Q  19 cacccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgtt 118  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||     |||||||||||| ||||||||| ||| |||    
T  32478799 cacccggtgcac-aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctgtttttacactagaggtt 32478892  T
Q  119 gttttcaggacttgaacccgtgacct 144  Q
    |||| ||||||||||||| |||||||    
T  32478893 gtttccaggacttgaacctgtgacct 32478918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 25629176 - 25629081
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaaga 114  Q
    ||||||||||| |||||||||||||| | ||||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  25629176 acccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacacaaga 25629081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 35567296 - 35567169
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||||| |||||||||||| ||||||||| ||| |||||||||||||||| ||||| |||||| ||||||||||||  ||||||||||||  | ||    
T  35567296 cccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctg 35567197  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| || ||||||||||| |||||||||    
T  35567196 tttccaagacttgaacccatgacctttc 35567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 39077804 - 39077930
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||  ||| ||||||| ||| ||||||||||| |||||||||  |||||||||||| | ||    
T  39077804 acccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccct-gttttacacaagaggctg 39077902  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  39077903 tttccaggacttgaacccgtgacctttc 39077930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 9987843 - 9987957
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatt-tttacacaagatgttg 119  Q
    |||||||||  |||||||||||||| ||| ||||  | |||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| ||||    
T  9987843 cccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttg 9987942  T
Q  120 ttttcaggacttgaa 134  Q
    ||| |||||||||||    
T  9987943 tttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 14983949 - 14983835
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcaggact 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||  |||||||||| ||| ||||||||||| |||||||||||| | |||||  | ||||    
T  14983949 aaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagact 14983850  T
Q  131 tgaacccgtgacctt 145  Q
    |||| ||||||||||    
T  14983849 tgaatccgtgacctt 14983835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 30690188 - 30690319
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct--------atttttacacaagat 115  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||         |||||||||||||     
T  30690188 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttattttttacacaagag 30690287  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    | | ||| ||||||||||||||||||||||||    
T  30690288 gctttttccaggacttgaacccgtgacctttc 30690319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 54730376 - 54730249
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttacccta--tttttacacaagatgtt 118  Q
    |||||||| |||||||||||||||||||||||||| ||||||| ||| |||  | |||||||| |||||||||||| ||||  ||||||||||||| | |    
T  54730376 cggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggct 54730277  T
Q  119 gttttcaggacttgaacccgtgaccttt 146  Q
    ||||  ||||||||||||||||||||||    
T  54730276 gtttctaggacttgaacccgtgaccttt 54730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 7909288 - 7909383
Alignment:
Q  20 acccggtgcaccaaagctccc-gcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||| ||||| ||||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  7909288 acccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacacaaga 7909383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 7385499 - 7385612
Alignment:
Q  35 gctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgttttcaggacttga 133  Q
    |||||||||||| |||||||||| || ||||||||||||| ||||||||| || || |||||||||| |||||||||| || | ||||| |||| |||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttga 7385598  T
Q  134 acccgtgacctttc 147  Q
    ||||||||||||||    
T  7385599 acccgtgacctttc 7385612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 49796911 - 49796830
Alignment:
Q  33 aagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaaga 49796830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 51865048 - 51865141
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    ||||||||  |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||| |  |||||||||||||    
T  51865048 ccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaaga 51865141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 23501916 - 23501792
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||  | ||||||||||||||| |||||||||  ||||||||||||| |    
T  23501916 acccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagagg 23501817  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     |||      |||||||||||||||||||||    
T  23501816 ctgt------gacttgaacccgtgacctttc 23501792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 55766475 - 55766568
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    |||||||||| ||||||| |||||||||| ||||||| | ||||| ||||||||| |||||||||||||||||||||||| |||  ||||||||    
T  55766475 cccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgtttacacacaaga 55766568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 8473628 - 8473747
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcaggg-tccggc-aaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgt 117  Q
    ||||||||||| |||||||||||||| |||||| |||||  |||||||||||||||| ||||||||||| |||||||||||||  ||  |||||||| |     
T  8473628 acccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccct-gttaaacacaagaggc 8473726  T
Q  118 tgttttcaggacttgaacccg 138  Q
    ||||| |||||||||||||||    
T  8473727 tgtttccaggacttgaacccg 8473747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 20225203 - 20225121
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct 100  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||||||  | |||||||||||||||||||||||||    
T  20225203 acccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 20225121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 20908649 - 20908723
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttacc 98  Q
    |||||| |||||||||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||||||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttacc 20908723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 30581485 - 30581602
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttt--tacacaagatgttgttttcagga 128  Q
    ||||||||  |||| ||||||||||| ||||||||||||||||  |||||||||||| || ||||||||| ||||  ||||||||| ||||||| || ||    
T  30581485 aaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacga 30581584  T
Q  129 cttgaacccgtgaccttt 146  Q
    ||||||||| ||||||||    
T  30581585 cttgaacccttgaccttt 30581602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 47441540 - 47441666
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgt 120  Q
    |||||| || |||||||| || ||| |||||||||| ||||||||| |||||| |||||||||||| |||||||||||| ||||||||| ||||   |||    
T  47441540 ccggtggacgaaagctcctgcttactcagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgt 47441639  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    ||   ||||||||||| ||||||||||    
T  47441640 ttcttggacttgaacctgtgacctttc 47441666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 21489215 - 21489099
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgt 117  Q
    |||| |||||| |||||||||||||||||||||| ||| |||||||||||||| || |||| ||||||||||| ||||| ||  ||||||| ||||| |     
T  21489215 acccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggc 21489116  T
Q  118 tgttttcaggacttgaa 134  Q
    ||||| |||||||||||    
T  21489115 tgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 30496333 - 30496456
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttt 122  Q
    |||||||| ||||||||  |||| ||| ||||||| |||| ||||| ||||| ||||||||||| ||||||||||||  | ||||||||||| | |||||    
T  30496333 cggtgcactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttaccc-gtgtttacacaagaggctgttt 30496431  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     || ||||||||| |||||||||||    
T  30496432 ccatgacttgaacacgtgacctttc 30496456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 54967145 - 54967020
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||||| |||||||||||||| | ||||| ||| |||||||||||||||| ||| ||||||| ||| |||||||||  ||||||||||||| |||     
T  54967145 cccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttc 54967048  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||| ||||||||  ||||||||||    
T  54967047 tttccagaacttgaacatgtgacctttc 54967020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 10277781 - 10277886
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaac 135  Q
    |||||||||| |||||||| || |||||||  ||||||| ||||||||||||||||||||| |||| ||||| |||||| | |||||  |||| ||||||    
T  10277781 ctcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatccta-ttttatacaagaggctgtttcaaggatttgaac 10277879  T
Q  136 ccgtgac 142  Q
    |||||||    
T  10277880 ccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 11394979 - 11394925
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11394979 acccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatt 11394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 11404706 - 11404652
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11404706 acccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatt 11404652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 38755916 - 38755970
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  38755916 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 49938613 - 49938726
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggact 130  Q
    |||||||||||||| |||||||  || ||||||||||||||||  |||||||||||| |   |||||||  ||||||||||||| | ||||| |||||||    
T  49938613 aaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttttacacaagaggctgtttccaggact 49938709  T
Q  131 tgaacccgtgacctttc 147  Q
    |||||| ||||||||||    
T  49938710 tgaacctgtgacctttc 49938726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 55830733 - 55830823
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||||| ||||||| |||||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||||||| |||  ||||||||    
T  55830733 ggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgtttacacacaaga 55830823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 7038179 - 7038052
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctattttt-acacaagatgt 117  Q
    |||| |||||| |||||||| | |||||||||||||||  ||| | |||||||||  ||||||||||||| || |||||||||||||| |||||||| |     
T  7038179 acccagtgcactaaagctcc-gtatacgcagggtccgggtaggtgccccaccattttggtgtattgtacgaagtcttaccctattttttacacaagaagc 7038081  T
Q  118 tgttttcaggacttgaacccgtgacctttc 147  Q
    ||||| ||||||||||||| ||||||||||    
T  7038080 tgttt-caggacttgaacctgtgacctttc 7038052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 12711461 - 12711561
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta--tttttacacaagatgttgtt 121  Q
    ||||||| |||| | ||||||||||  |||| |  |||||||||| ||||| |||||||||||||||| |||||||||  ||||||||||||||||||||    
T  12711461 ggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttttacacaagatgttgtt 12711560  T
Q  122 t 122  Q
    |    
T  12711561 t 12711561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 30352591 - 30352667
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttac 97  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||  || ||||||||||||||||| ||||    
T  30352591 cggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttac 30352667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 39029080 - 39029196
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggac 129  Q
    |||||||||||||| ||||||||||| ||| |||||||||| ||  ||||||||||| ||||||||||||  ||||||||||||| | ||||| || | |    
T  39029080 aaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggc 39029179  T
Q  130 ttgaacccgtgaccttt 146  Q
    |||||||  ||||||||    
T  39029180 ttgaacctatgaccttt 39029196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 42164224 - 42164284
Alignment:
Q  87 cgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||| ||||||||||||| ||||||| || |||||||||||||||||||||    
T  42164224 cgcagccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttc 42164284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 47482864 - 47482912
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 47482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 38786736 - 38786673
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtatt 83  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  38786736 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 13256407 - 13256504
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    ||||||||||| |||||||||||| | || |||| ||| |||||||||||| ||  | |||||||||||||||||||||||||  |||||||||||||    
T  13256407 acccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaaga 13256504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 33836495 - 33836549
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  33836495 acccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 32484360 - 32484307
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat 73  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  32484360 acccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 40553945 - 40553998
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat 73  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  40553945 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 487135 - 487271
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcg---------gtgtattgtacgcagccttaccctatttt-tacac 110  Q
    |||||||||| ||||||||||||| |||||  ||||| |||||||||| |||| |          |||||||||||||||| ||||| | |||| |||||    
T  487135 cccggtgcactaaagctcccgcattcgcagaatccgggaaggggtcccgccatcccaccattttagtgtattgtacgcagctttaccttgttttatacac 487234  T
Q  111 aagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||| || |||||||||||||||||||||    
T  487235 aagaggttgtttccaagacttgaacccgtgacctttc 487271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 9037847 - 9037772
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaa-ggggtcccaccattcggtgtattgtacgcagccttaccctatttt 105  Q
    ||||||||| |||||||||| || ||| || ||||||| |||||||||||||||||| |||| |||||||||||||    
T  9037847 caaagctcctgcatacgcagtgttcggaaaaggggtcctaccattcggtgtattgtatgcagtcttaccctatttt 9037772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 10660520 - 10660415
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||||||| ||  | |||||||| |||||||   ||||||||||| |||||| |||||||| ||||||| |||| ||||||| |||||    
T  10660520 aaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagga 10660422  T
Q  129 cttgaac 135  Q
    |||||||    
T  10660421 cttgaac 10660415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 10874665 - 10874560
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||||||| ||  | |||||||| |||||||   ||||||||||| |||||| |||||||| ||||||| |||| ||||||| |||||    
T  10874665 aaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccagga 10874567  T
Q  129 cttgaac 135  Q
    |||||||    
T  10874566 cttgaac 10874560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 25388303 - 25388249
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||    
T  25388303 acccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 10379997 - 10380078
Alignment:
Q  66 cccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||| ||| |||||||||||||||   ||| ||||||||||||||||| |||||||  |||||||||||  ||||||||||    
T  10379997 cccactatttggtgtattgtacgcaattttatcctatttttacacaagaggttgtttgtaggacttgaacaagtgacctttc 10380078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 36589870 - 36589753
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||||||||||||||||||  ||||| | | |||||||||||||| || |||||| |||   |||| ||||| |  ||||||||||||| | |    
T  36589870 cccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccattttggtgtactgtcaacagcattaccatgttttttacacaagaggct 36589771  T
Q  119 gttttcaggacttgaacc 136  Q
    |||| |||||||||||||    
T  36589770 gtttccaggacttgaacc 36589753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 3580859 - 3580943
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    |||||||||| |||| ||||||||||| ||||||||| | |||| ||||||||| || |||||||||| |  |||||||||||||    
T  3580859 caaagctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagccttaccatggtttttacacaaga 3580943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 17079701 - 17079777
Alignment:
Q  62 gggtcccaccattcggtgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcaggacttgaaccc 137  Q
    |||||||||||||  | |||||||| ||||||||||||| |||| |||||||||| |||||| || |||||||||||    
T  17079701 gggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaaccc 17079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 32629293 - 32629404
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaa 134  Q
    ||||| |||||||| ||||||| |||||||||| ||| || ||||||| ||| || |||||||||| |||||  |||||| | |||||  |||| |||||    
T  32629293 ctcccacatacgcaaggtccgggaaggggtcccgccaatttggtgtat-gtaggcggccttaccctgtttttttacaagaggctgtttcgaggatttgaa 32629391  T
Q  135 cccgtgacctttc 147  Q
    |||||||||||||    
T  32629392 cccgtgacctttc 32629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 14590922 - 14590836
Alignment:
Q  63 ggtcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||| | ||||||||| ||||||||||||  | |||||| |||||| | |||||  |||||||||| ||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttc 14590836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 17315375 - 17315434
Alignment:
Q  88 gcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||| | ||||||||||||| |||||||  |||| ||||||||||||||||||    
T  17315375 gcagccttaccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttc 17315434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 20405210 - 20405128
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||| |||||||||||||| || |||||||| |||||||||||||||  |  ||||||||||||||  |||||||| |||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgttttt 20405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 36816392 - 36816479
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacc-attcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||| ||| ||||||||||||||| |||||||| | |||| ||||||||  || |||||||||||||||||| | |||| |||||    
T  36816392 acccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgcagccctgccctgttttt 36816479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 35532119 - 35532077
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaagg 62  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  35532119 acccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 44718682 - 44718641
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccat 73  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  44718682 aaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 50555665 - 50555718
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||| ||||||||    
T  50555665 cccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 23914342 - 23914452
Alignment:
Q  28 caccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttca 125  Q
    ||||||||||| | |||||||||| | |   ||||| |||||||||  | | ||||||||| |||| ||||||||||||||||||||||    |||||||    
T  23914342 caccaaagctctcacatacgcaggattcatgaagggatcccaccatatttgatgtattgtatgcagtcttaccctatttttacacaaga---cgttttca 23914438  T
Q  126 ggacttgaacccgt 139  Q
    ||||||||| ||||    
T  23914439 ggacttgaatccgt 23914452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 43035307 - 43035247
Alignment:
Q  88 gcagccttaccctattt-ttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||| | ||| |||||||||| ||||||| | ||||||||||||||||||||||    
T  43035307 gcagccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttc 43035247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 16494345 - 16494259
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctatttt 105  Q
    |||||| ||| |||||| |||||||| ||||||| || || |||||||||||  || ||||||||||| ||||| ||||||| ||||    
T  16494345 cccggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 51420645 - 51420586
Alignment:
Q  76 ggtgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcaggacttgaa 134  Q
    |||||||||||| |||||||||||| |||| ||||||||| ||||||| || ||||||||    
T  51420645 ggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaa 51420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 12666865 - 12666914
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtccca 69  Q
    |||||||| || |||||||| ||||||||| |||||| ||||||||||||    
T  12666865 acccggtgtactaaagctcctgcatacgcatggtccgacaaggggtccca 12666914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 25343258 - 25343189
Alignment:
Q  76 ggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacct 144  Q
    |||||||||||||||||||||||||  |||||||||||||   | ||| ||| ||||||||| |||||||    
T  25343258 ggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacct 25343189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 28494277 - 28494224
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    |||||||||| | |||||||||||| ||||| || || ||||||||||||||||    
T  28494277 cccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatt 28494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 54640430 - 54640475
Alignment:
Q  102 tttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||| | ||||| || |||||||||||||||||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttc 54640475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 8820629 - 8820581
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||| ||| ||| ||||||||||||||| || ||||||||||||||||    
T  8820629 tgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 41549425 - 41549381
Alignment:
Q  103 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||| ||||||| ||| ||||||||||||||| ||||    
T  41549425 ttttacacaagaggttgtttccagaacttgaacccgtgacatttc 41549381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 28817634 - 28817760
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| | |    
T  28817634 acccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggct 28817733  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||||||||||||||||||||||    
T  28817734 gtttccaggacttgaacccgtgacctt 28817760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 44530276 - 44530150
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||    
T  44530276 acccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggtt 44530177  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| || |||||||||||||||||||    
T  44530176 gtttccaagacttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 13160828 - 13160703
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||| ||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||    
T  13160828 acccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 13160729  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    |||  |||||||||||||||||||||    
T  13160728 tttctaggacttgaacccgtgacctt 13160703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 45071391 - 45071266
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||    
T  45071391 acccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 45071292  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| ||| ||||||||||||||||||    
T  45071291 tttccagaacttgaacccgtgacctt 45071266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 12670258 - 12670384
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  12670258 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 12670356  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  12670357 tttccaggacttgaacccgtgacctttc 12670384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 36720919 - 36720797
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttt 122  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| | |||||    
T  36720919 ggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 36720820  T
Q  123 tcaggacttgaacccgtgacctt 145  Q
     ||||||||||||||||||||||    
T  36720819 ccaggacttgaacccgtgacctt 36720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 31457297 - 31457172
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||||| | ||||||||||||||||||||  || ||||||||| |||||| | ||||||||||||||||||  ||||||||||||||||| ||||||    
T  31457297 ccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtt 31457198  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | ||||||||||||||||||||||||    
T  31457197 tacaggacttgaacccgtgacctttc 31457172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 12626017 - 12625891
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgt 117  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||||||||||| |||| |||||||  | ||||||||||||| ||    
T  12626017 acccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggt 12625918  T
Q  118 tgttttcaggacttgaacccgtgacct 144  Q
    ||||| |||||||||| ||||||||||    
T  12625917 tgtttccaggacttgagcccgtgacct 12625891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 18164768 - 18164895
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| |||||||||||||||||||||||||| ||  |||| || | || ||||||||||||||| ||||||||| ||||||||||||| | ||    
T  18164768 acccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttttacacaagaggctg 18164867  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  18164868 tttccaggacttgaacccgtgacctttc 18164895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 30454105 - 30454231
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||||| |||  |||||||||||| | ||    
T  30454105 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagcctta-ccttgttttacacaagaggctg 30454203  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  30454204 tttccaggacttgaacccgtgacctttc 30454231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 39461002 - 39461132
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||  | |||||||||||||||||||||| ||  ||||||||||||| |    
T  39461002 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaagagg 39461101  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||||||||    
T  39461102 ctgtttccaggacttgaacccgtgacctttc 39461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 8897784 - 8897898
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgttttcaggact 130  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||| |||||||    
T  8897784 aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggact 8897883  T
Q  131 tgaacccgtgacctt 145  Q
    | |||||||||||||    
T  8897884 tcaacccgtgacctt 8897898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 29521693 - 29521819
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| ||||||||||||||||||||||| || | ||| |||||||||| |||||||||||||||||||||||||  |||||| |||||| | |    
T  29521693 acccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggct 29521792  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||||||||||||||||||||||    
T  29521793 gtttccaggacttgaacccgtgacctt 29521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 35261806 - 35261680
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||   |    
T  35261806 acccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaagagact 35261707  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| |||| |||||||||||||||||    
T  35261706 gtttccagggcttgaacccgtgacctt 35261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 7136535 - 7136663
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| |    
T  7136535 acccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagagg 7136634  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
    |||||| |||||||||||||| |||||||    
T  7136635 ttgtttccaggacttgaacccatgacctt 7136663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 5135299 - 5135418
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||| | ||    
T  5135299 cccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctg 5135397  T
Q  120 ttttcaggacttgaacccgtg 140  Q
    ||| |||||||||||||||||    
T  5135398 tttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 20284077 - 20284209
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccc---tatttttacacaaga 114  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||   | |||||| ||||||    
T  20284077 acccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaaga 20284176  T
Q  115 tgttgttttcaggacttgaacccgtgacctttc 147  Q
     | ||||| ||||||||||||||||||||||||    
T  20284177 ggctgtttccaggacttgaacccgtgacctttc 20284209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 21070705 - 21070838
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccc----tatttttacacaag 113  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||    | |||||| |||||    
T  21070705 acccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaag 21070804  T
Q  114 atgttgttttcaggacttgaacccgtgacctttc 147  Q
    | | ||||| ||||||||||||||||||||||||    
T  21070805 aggctgtttccaggacttgaacccgtgacctttc 21070838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 389770 - 389642
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt---acacaagatgtt 118  Q
    ||||||||| ||||||| ||||||||||||||| || ||||| ||||| |||| ||||||||||||||| ||||||||| |||||   |||||||| | |    
T  389770 ccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggt 389671  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||||||||||||    
T  389670 gtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 8483947 - 8484069
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||||| | ||||||||||||||||||||||| || | |||||||||||| | |||||||||||||||||||| ||||  ||||||||||||| ||||    
T  8483947 cccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttg 8484046  T
Q  120 ttttcaggacttgaacccgtgac 142  Q
    ||| |||||||||||||| ||||    
T  8484047 tttccaggacttgaacccatgac 8484069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 6760951 - 6760823
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||| || |||||||  |||||||||||||||  | ||||||||||||| |||||||||||  ||||||||||||| |    
T  6760951 acccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagagg 6760852  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||||||||||||    
T  6760851 ctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 17823703 - 17823575
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| |||||||| ||||| ||||||| ||| ||||||| |||||||| |||||||| ||||||| |||| |||  ||||||||||||| | |    
T  17823703 acccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacacaagaggct 17823604  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||||||||||||    
T  17823603 gtttccaggacttgaacccgtgacctttc 17823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 2626645 - 2626518
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc----tatttttacacaagatgttg 119  Q
    |||||||  ||||||||||||| |||||||| || ||||||||||| |||| |||||||||||||||| |||||||    | ||||||||||||| | ||    
T  2626645 ggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctg 2626546  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  2626545 tttccaggacttgaacccgtgacctttc 2626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 24365078 - 24365191
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct--atttttacacaagatgttgttttcagga 128  Q
    |||||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||   ||||||||||||| | |||||  |||     
T  24365078 caaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctaggg 24365177  T
Q  129 cttgaacccgtgac 142  Q
    ||||||||||||||    
T  24365178 cttgaacccgtgac 24365191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 29877217 - 29877135
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  29877217 ggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 29877135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 44781517 - 44781642
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctat-ttttacacaagatgttgtt 121  Q
    |||||| ||||||||||||||||||||||| || | ||||||||| ||||   |||||||||||| |||||||||||| | |||||||||||| ||||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | |||||||||||||||||| |||||    
T  44781617 tccaggacttgaacccgtgaactttc 44781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 26954262 - 26954133
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt--acacaagat 115  Q
    |||| |||||| |||||||||||||| ||  |||| || ||||||||||||||||   ||||||||||||||||||||||||| |||||  ||||||||     
T  26954262 acccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagag 26954163  T
Q  116 gttgttttcaggacttgaacccgtgacctt 145  Q
    | ||||| ||||||||||||||||||||||    
T  26954162 gctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 20869523 - 20869632
Alignment:
Q  35 gctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaa 134  Q
    ||||||||||| ||||||||||| |||||||| |||| |  |||||||||||| |||||||||||| |||| |||||||| | ||||| |||||||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacctt--ggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaa 20869619  T
Q  135 cccgtgacctttc 147  Q
    |||||||||||||    
T  20869620 cccgtgacctttc 20869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 5689756 - 5689640
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgt 120  Q
    ||||||||| ||||||||| |||||||| ||| ||| ||||||| |||||||| |||||||||||||||||||||||||  ||||||||||||| | | |    
T  5689756 ccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctat 5689657  T
Q  121 tttcaggacttgaaccc 137  Q
    || || |||||||||||    
T  5689656 ttacaagacttgaaccc 5689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 22598279 - 22598156
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt-acacaagatgttgttt 122  Q
    ||||||| |||| ||||||||||||| ||||||| || ||||| ||||| | ||||||||||||  ||||||||||| ||||| |||||||| |||||||    
T  22598279 ggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgttt 22598181  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||    
T  22598180 ccaggatttgaacccgtgacctttc 22598156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 35106022 - 35105922
Alignment:
Q  49 agggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcaggacttgaacccgtgaccttt 146  Q
    ||||||| | ||| ||||||||||||| |||||||||||||||||||||| || | |||||||||||| ||||||| |||||||||||||||||||||||    
T  35106022 agggtccaggaagaggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgaccttt 35105923  T
Q  147 c 147  Q
    |    
T  35105922 c 35105922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 25250651 - 25250523
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttacccta-tttttacacaagatg 116  Q
    ||||||||||| ||| |||||||||| || |||| ||| |||||||||||||||  | |||||||||||||||||| ||||||| ||||||||||| | |    
T  25250651 acccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaatagg 25250552  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     ||||| ||||||||||||  ||||||||    
T  25250551 ctgtttccaggacttgaacatgtgacctt 25250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 10857956 - 10857870
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||| |||||||||||||||||| ||||| | ||| |||||||||| | |||||||||| |||||||||||||| |||||    
T  10857956 acccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgttttt 10857870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 20870052 - 20869955
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    ||||||||||| |||||||||||||| || |||||| | |||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||    
T  20870052 acccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaaga 20869955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 19729462 - 19729382
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt 105  Q
    |||||| | |||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 26457854 - 26457773
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatt 103  Q
    ||||||||||| ||||||||| |||||||| |||| ||  ||||||||||||| | ||||||||||||||||||||||||||||    
T  26457854 acccggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccaccaattggtgtattgtacgcagccttaccctatt 26457773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 28407530 - 28407417
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||  |||||||||||||||| ||||||||| |||||||||||||||| |||            |||||||||| ||||||||||||| | ||    
T  28407530 acccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttggt------------gccttaccctgtttttacacaagaggctg 28407443  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| ||||||||||||||||||||||    
T  28407442 tttccaggacttgaacccgtgacctt 28407417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 42083712 - 42083835
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttt-tacacaagatgttgtttt 123  Q
    ||||| ||||||||| | ||| |||||| ||| ||||||||||||||||  ||| || ||||||||||||| ||| ||||| ||||||| | | |||||     
T  42083712 tgcactaaagctcccacgtacacagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttc 42083811  T
Q  124 caggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||||||||    
T  42083812 caggacttgaacccgtgacctttc 42083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 26102644 - 26102578
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgta 86  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  26102644 acccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 44742527 - 44742653
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||||||||| || |||||||||| || |||||||   ||||||||||||||||  |||||||||||||||||||||||||  |||||||||| ||  ||    
T  44742527 cccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagatt 44742626  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||| |||||||| | |||||||    
T  44742627 gtttccagaacttgaactcatgacctt 44742653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 16225148 - 16225060
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||| |||||||||||||| || |||||||| ||||| |||||||||  | |||||||||||||||| |||||||| |||||    
T  16225148 acccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttt 16225060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 23000260 - 23000352
Alignment:
Q  53 tccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||| |||||||||||||||| ||||||||||| | | ||||||| | ||||||||||||| | ||||| ||||||||  ||||||||||||||    
T  23000260 tccgggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttc 23000352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 27508037 - 27507985
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  27508037 acccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 17250888 - 17251001
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatgttgtt 121  Q
    |||||| ||||||||  |||||||||||| ||| || ||||||||||||  | |||||||||||||| |||||| |||  ||||||||||||| | || |    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgct 17250987  T
Q  122 ttcaggacttgaac 135  Q
    | ||||||||||||    
T  17250988 tccaggacttgaac 17251001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 11000970 - 11001086
Alignment:
Q  33 aagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacc--ctatttttacacaagatgttgttttcaggact 130  Q
    ||||||| |||||  |||||| |||  ||||||||||||||| |||||||||||| |||||||| |   | ||||||||||  | ||||||||||| | |    
T  11000970 aagctcctgcataaacagggttcgggtaggggtcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaatt 11001069  T
Q  131 tgaacccgtgacctttc 147  Q
    |||||||| ||||||||    
T  11001070 tgaacccgcgacctttc 11001086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 16013583 - 16013529
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||||||||| |||||||| || |||||||| |||||||    
T  16013583 acccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatt 16013529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 24245564 - 24245450
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca---ttcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||||||||||| | |||||||||||| |   || |||| |||||||| || |||||||   | ||||| |||| |  |||| |||||    
T  24245564 aaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccc---tgttacataaga-gacgtttccagga 24245469  T
Q  129 cttgaacccgtgacctttc 147  Q
    |||||||||||||||||||    
T  24245468 cttgaacccgtgacctttc 24245450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 35107319 - 35107373
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||| |||||||| ||| |||||| ||||||||||||||||    
T  35107319 acccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccatt 35107373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 27468100 - 27468137
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccgg 57  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  27468100 acccggtgcactaaagctcccgcatacgcagggtccgg 27468137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 40444890 - 40444845
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtccc 68  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||    
T  40444890 cggtgcactaaagctccaacatacgcagggtccggcaaggggtccc 40444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 14017989 - 14018105
Alignment:
Q  33 aagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcaggact 130  Q
    ||||| ||||||  ||||||||| | ||| |||||||||| ||  ||||||||||||||| || ||||| |||| |||||||||   ||||| || ||||    
T  14017989 aagctaccgcatctgcagggtccaggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagact 14018088  T
Q  131 tgaacccgtgacctttc 147  Q
    ||||||| |||||||||    
T  14018089 tgaacccatgacctttc 14018105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 23286375 - 23286426
Alignment:
Q  62 gggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaaga 114  Q
    ||||||||||||| ||||||||||||||||| |||||||  ||||||||||||    
T  23286375 gggtcccaccatttggtgtattgtacgcagctttaccct-gttttacacaaga 23286426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 30962847 - 30962909
Alignment:
Q  86 acgcagccttaccctatttt-tacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||| |||||||||| ||||||||| | ||||| |||||||||||  |||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttc 30962909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 43942414 - 43942365
Alignment:
Q  59 aaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  43942414 aaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 43942365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 36486574 - 36486627
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat 73  Q
    |||||| |||| |||||||| ||||||||| ||||||| ||| |||||||||||    
T  36486574 acccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 36918195 - 36918123
Alignment:
Q  76 ggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||| ||||||||||||  |||||||| ||||  |||||| ||| ||||||||  ||||||||||    
T  36918195 ggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttc 36918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 24449017 - 24448891
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgtt 118  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| | | |    
T  24449017 acccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggct 24448918  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||||||||||||||||||||||    
T  24448917 gtttccaggacttgaacccgtgacctt 24448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 41014445 - 41014320
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| |||||||||||||| || |||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||    
T  41014445 acccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctg 41014346  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| ||||||||||||||||||||||    
T  41014345 tttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 32703549 - 32703423
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  32703549 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 32703451  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  32703450 tttccaggacttgaacccgtgacctttc 32703423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 38879710 - 38879580
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||  |||||| |||||| |    
T  38879710 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagagg 38879611  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||||||||    
T  38879610 ctgtttccaggacttgaacccgtgacctttc 38879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 8169992 - 8170118
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||||||||  || |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||| | | ||    
T  8169992 acccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaaaaggctg 8170090  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  8170091 tttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 19142956 - 19143067
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttc 124  Q
    |||||| ||| |||||||||||||| ||||||| |||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||| |    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttcc 19143055  T
Q  125 aggacttgaacc 136  Q
    ||||||||||||    
T  19143056 aggacttgaacc 19143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 35710438 - 35710312
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||| | ||||| |||||||||||||||| ||||||||| |||||||||||||||| |||||||||||| | ||    
T  35710438 acccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttacccta-ttttacacaagaggctg 35710340  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  35710339 tttccaggacttgaacccgtgacctttc 35710312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 43574732 - 43574609
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt-tacacaagatgttg 119  Q
    |||||||| | |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| |||| |||||||||  |||    
T  43574732 cccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattg 43574633  T
Q  120 ttttcaggacttgaacccgtgacc 143  Q
    ||| |||||||||||| |||||||    
T  43574632 tttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 43334331 - 43334201
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt--acacaagat 115  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||   ||||||||||||||||||||||||| |||||  ||||| ||     
T  43334331 acccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacaggag 43334233  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    | ||||| ||||||||||||||||||||||||    
T  43334232 gctgtttccaggacttgaacccgtgacctttc 43334201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 22600569 - 22600455
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcaggact 130  Q
    |||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||| |||||||||||| | |||||||||| || |||||| |||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggact 22600470  T
Q  131 tgaacccgtgacctt 145  Q
    ||||||||| |||||    
T  22600469 tgaacccgtaacctt 22600455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 4619112 - 4619240
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| ||||||| |||||| || |||||||| |||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| |    
T  4619112 acccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagg 4619211  T
Q  117 ttgttttcaggacttgaacccgtgacctt 145  Q
     | ||| ||||||||||||||||||||||    
T  4619212 ctatttccaggacttgaacccgtgacctt 4619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 2838899 - 2838803
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttt 122  Q
    |||||| | ||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  2838899 tgcaccgatgctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgttt 2838803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 7097772 - 7097872
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| |||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgtttt 7097871  T
Q  124 c 124  Q
    |    
T  7097872 c 7097872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 27328869 - 27328751
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||||||||| ||| |||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||   ||||| |||||    
T  27328869 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 27328770  T
Q  129 cttgaacccgtgacctttc 147  Q
    |||||||| ||||||||||    
T  27328769 cttgaacctgtgacctttc 27328751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 1850764 - 1850639
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||||| |||||| |||||| |||||||||| | ||| |||||||||||| | ||||||||||||| |||||  || ||||||||||||| ||| ||    
T  1850764 ccggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatt 1850665  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | | ||||||||||||||||||||||    
T  1850664 tccgggacttgaacccgtgacctttc 1850639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 7368523 - 7368413
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | ||||||| |||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||||  |||||||||||| | ||    
T  7368523 acccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccct-gttttacacaagaggctg 7368425  T
Q  120 ttttcaggactt 131  Q
    ||| ||||||||    
T  7368424 tttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 16880655 - 16880750
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    ||||||||||| |||||||||||||||||| ||||||| ||| |||| ||||||| |||||||||||||||||||||||||  |||||||||||||    
T  16880655 acccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacacaaga 16880750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 208936 - 209062
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||||||| |||||||  |||||| |||||||| | ||||||||||||||||  ||||||||| | ||||||||||||| ||||||||||||| ||||    
T  208936 cccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttg 209035  T
Q  120 ttttcaggacttgaacccgtgaccttt 146  Q
    ||  ||||||||||||  |||||||||    
T  209036 ttgccaggacttgaacttgtgaccttt 209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 13801775 - 13801895
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| ||||||| |||||| || |||||||| |||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||| |    
T  13801775 acccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagg 13801874  T
Q  117 ttgttttcaggacttgaaccc 137  Q
     || || ||||||||||||||    
T  13801875 ctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 34154822 - 34154902
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct 100  Q
    ||||||||||| | |||| ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  34154822 acccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 34154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 42924840 - 42924970
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggt--ccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctatttt-tacacaagatg 116  Q
    ||||||||| |||||| |||||||||||||||  | || ||||| | ||| ||||   ||||||||||||||| ||||||||| |||| |||||||||||    
T  42924840 ccggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttacacaagatg 42924939  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||| |||||||||||    
T  42924940 ttgttttcaggacttgaactcgtgacctttc 42924970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 16957441 - 16957374
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtac 87  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16957441 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 12006339 - 12006466
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttacccta-tttttacacaagatgttg 119  Q
    |||||||| |||||||||||||| |||||||| || |||||||||||||||  | ||||||||||| | |||||||||||| |||||||| |||| ||||    
T  12006339 cggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttacataagaggttg 12006438  T
Q  120 ttttcaggacttgaa-cccgtgacctttc 147  Q
    ||| || |||||||| |||||||||||||    
T  12006439 tttcca-gacttgaaccccgtgacctttc 12006466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 1405300 - 1405188
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgttttcaggacttg 132  Q
    |||||||||||| ||||||| | | || ||||||||||||| |||||||||||||||  ||||| ||| |||||| | |||| ||||||| |||||||||    
T  1405300 agctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttg 1405201  T
Q  133 aacccgtgacctt 145  Q
    |||||||||||||    
T  1405200 aacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 1565558 - 1565430
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagcctta--ccctatttttacacaagatgt 117  Q
    ||||||||||| || |||||| |||| ||||||||||| |||||||||| ||||| |||| ||||||||||||||||     | ||||||| ||||| ||    
T  1565558 acccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagccttaatatgtttttttactcaagaggt 1565460  T
Q  118 tgttttcaggacttgaacccgtgacctttc 147  Q
    ||||| ||||||||||||||| ||||||||    
T  1565459 tgtttccaggacttgaacccgcgacctttc 1565430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 5873331 - 5873441
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    |||| ||||| ||||||||||||||||||| ||||||  ||| ||||||||| | |||||| |||||  ||||||||||||||||||||||||| | |||    
T  5873331 cccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccctatttttacacaagaggctgt 5873430  T
Q  121 tttcaggactt 131  Q
    || || |||||    
T  5873431 ttccacgactt 5873441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 30006452 - 30006324
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatt-tttacacaagatgtt 118  Q
    ||||||||||| |||||||||||||||  |||  |||| ||||||||||||||||  ||||| ||||| |||||||||||| || |||| | |||| |||    
T  30006452 acccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataagaggtt 30006353  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||||| ||||||||| |  |||||||||    
T  30006352 gttttccggacttgaatctatgacctttc 30006324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 39301249 - 39301122
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccctatttt-tacacaagatgtt 118  Q
    |||||||||| ||| ||||| |||||| ||||||||| ||||||||||||| ||  |||| ||| |||||| ||||||||| |||| ||||||||| |||    
T  39301249 cccggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggtt 39301151  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||  || |||||||||||||||||||||    
T  39301150 gttcccaagacttgaacccgtgacctttc 39301122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 29334522 - 29334427
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccct-atttttacacaaga 114  Q
    |||||||||  |||| |||| |||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| |  |||||||||||||    
T  29334522 cccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacacaaga 29334427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 41426055 - 41425952
Alignment:
Q  40 cgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccg 138  Q
    ||||| ||||| ||| || |||||||||||||| | ||||||||||| |||||||||||||  ||||||||||| | ||||||| ||| |||||||||||    
T  41426055 cgcatccgcagagtctgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccg 41425956  T
Q  139 tgac 142  Q
    ||||    
T  41425955 tgac 41425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 12575669 - 12575739
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgca 90  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||| || |||||||||||||||    
T  12575669 cccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgca 12575739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 3771465 - 3771380
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    |||||||||| ||||||||| ||||| ||| |||||| |||||||||||||| | |||||||||| | |||||||||||| |||||    
T  3771465 cccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgttttt 3771380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 28516453 - 28516570
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcgg-tgtattgtacgcagccttaccctatttt-tacacaagatgttgttttcaggac 129  Q
    |||||||| |||| ||||||||| || || |||||||||||||  | |||||||||||||||| || ||| |||| ||||||||| | ||||| || |||    
T  28516453 aaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaagac 28516552  T
Q  130 ttgaacccgtgacctttc 147  Q
    ||||||||||||||||||    
T  28516553 ttgaacccgtgacctttc 28516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 24903705 - 24903817
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttg 119  Q
    ||||||||||||||| |||||| || |||| |||||| |||||||| ||||| | |||| ||||||| ||  ||||||||| ||||||||||| | | ||    
T  24903705 cccggtgcaccaaagttcccgcgtatgcagtgtccgggaaggggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctg 24903804  T
Q  120 ttttcaggacttg 132  Q
    |||||||||||||    
T  24903805 ttttcaggacttg 24903817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 25622585 - 25622533
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  25622585 ccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 20135733 - 20135623
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    |||||||||||  ||||||| ||||| || |||||||| |||||||||||||||  | ||||||||||||||||||||||| |  ||||||||||||| |    
T  20135733 acccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaagagg 20135634  T
Q  117 ttgttttcagg 127  Q
     ||||| ||||    
T  20135633 ctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 22907913 - 22908000
Alignment:
Q  60 aggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||| ||||||||||| ||| |||||| || ||||||||||||| | |||||   |||||||||||| |||||||||    
T  22907913 aggggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttc 22908000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 13774991 - 13774921
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcag 91  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||  ||||| |||||||||| |||||    
T  13774991 cccggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattgtgcgcag 13774921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 18426160 - 18426038
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgttttc 124  Q
    ||||| ||||||| ||||||||||| || ||  |||||||| ||||||||| |||||||||| || |||| | ||| |||||||||||||  ||||||||    
T  18426160 tgcactaaagctctcgcatacgcagagttcgaaaaggggtctcaccattcgatgtattgtacacaacctttctctattttttacacaagagattgttttc 18426061  T
Q  125 aggacttgaacccgtgacctttc 147  Q
    | ||||| |||| ||||| ||||    
T  18426060 aagacttaaacctgtgacatttc 18426038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 24323724 - 24323829
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcaggac 129  Q
    |||||||||||||||  ||||||| || |||||||||||| ||| || ||||| ||||||  |||||||| | |||||||||||| ||||||| ||| ||    
T  24323724 caaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaac 24323823  T
Q  130 ttgaac 135  Q
    ||||||    
T  24323824 ttgaac 24323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 24360348 - 24360453
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcaggac 129  Q
    |||||||||||||||  ||||||| || |||||||||||| ||| || ||||| ||||||  |||||||| | |||||||||||| ||||||| ||| ||    
T  24360348 caaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaac 24360447  T
Q  130 ttgaac 135  Q
    ||||||    
T  24360448 ttgaac 24360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 37024626 - 37024690
Alignment:
Q  82 ttgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||| |||| |||||||| | ||||| ||||||||||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttc 37024690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 21784343 - 21784394
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  21784343 cggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatt 21784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 23974840 - 23974781
Alignment:
Q  87 cgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    |||||||||||||| ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgacctt 23974781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 10306494 - 10306536
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  10306494 aaagctcccgcatacgcagggtccgggaaggggtcccaccatt 10306536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 12477132 - 12477205
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagcctta 96  Q
    ||||||| |||||||  ||||||||||  ||||| |||||||||||||| || |||||||||||||||||||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 39801643 - 39801591
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    ||||||||||| |||||||||||||||| |||||| || ||||||||||||||    
T  39801643 acccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 16028632 - 16028683
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacc 71  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||    
T  16028632 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 31694120 - 31694202
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||| ||| |||||||||||||| |||| || |||| |||||| || | ||||||||||| ||||| ||| |||||||||    
T  31694120 ggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctattttt 31694202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 22861680 - 22861802
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttt 122  Q
    |||||||| | |||||||||||| ||||||| ||  |||||||||||||||| | ||||||||  |||| ||||  ||  ||||||||||||   || ||    
T  22861680 cggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgtgagcagtctta--cttgttttacacaagagactgctt 22861777  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
      |||||||||| ||||||||||||    
T  22861778 ctaggacttgaatccgtgacctttc 22861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 21542489 - 21542529
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccatt 21542529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 37225990 - 37226070
Alignment:
Q  41 gcatacgcagggtccggcaaggggtcccaccattcggt-gtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    ||||||||| ||| ||| ||||||||||||||||  || ||||||||| ||  ||||||| ||||||| ||||||||||||    
T  37225990 gcatacgcatggttcgggaaggggtcccaccattttgttgtattgtacacattcttacccaatttttatacaagatgttgt 37226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 22025601 - 22025542
Alignment:
Q  89 cagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||| ||||| |||||||| | ||||| |||||||||||||| |||||||||    
T  22025601 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 30877572 - 30877623
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacc 71  Q
    ||||||||||| | ||||||| |||| ||||||||||| |||||||||||||    
T  30877572 acccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 32354254 - 32354211
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggg 63  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||    
T  32354254 acccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 3176770 - 3176839
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttac 97  Q
    |||||| |||||||| |||||| ||| ||||||   |||||||||||| | ||||||||||||||| ||||||    
T  3176770 gtgcactaaagctccggcatacacagagtccgg---ggggtcccaccagttggtgtattgtacgcaaccttac 3176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 34074584 - 34074698
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttg 132  Q
    ||||||| ||||||||||||  || |||||| ||  ||||| ||||||||| ||||| ||||||  |  ||||||||||||| | |||||  ||||||||    
T  34074584 agctcccccatacgcagggtttgggaaggggccctgccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttg 34074683  T
Q  133 aacccgtgacctttc 147  Q
    |||  ||||||||||    
T  34074684 aacttgtgacctttc 34074698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 11657708 - 11657785
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttac 97  Q
    ||||||| || |||| |||||| |  ||||||| ||| |||||||||||||| || ||||||||||| ||||||||||    
T  11657708 cccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccaccattttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29184069 - 29184118
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtccca 69  Q
    ||||||||||| |||||||||||||||||| |||| | ||||| ||||||    
T  29184069 acccggtgcactaaagctcccgcatacgcatggtctgacaaggagtccca 29184118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 146
Target Start/End: Original strand, 9794466 - 9794494
Alignment:
Q  118 tgttttcaggacttgaacccgtgaccttt 146  Q
    |||||||||||||||||||||||||||||    
T  9794466 tgttttcaggacttgaacccgtgaccttt 9794494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 22187356 - 22187284
Alignment:
Q  76 ggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||||| |||| | | ||||| |||||||| | ||||| |||||||| |||| ||||||||||    
T  22187356 ggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttc 22187284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 8455324 - 8455450
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaagatgtt 118  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| | |    
T  8455324 acccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggct 8455423  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| ||||||||||||||||||||||    
T  8455424 gtttccaggacttgaacccgtgacctt 8455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 10546290 - 10546161
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgt 117  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  | |||||| |||||| |     
T  10546290 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaagagga 10546191  T
Q  118 tgttttcaggacttgaacccgtgacctttc 147  Q
    ||||| ||||||||||||||||||||||||    
T  10546190 tgtttccaggacttgaacccgtgacctttc 10546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 9671306 - 9671178
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  9671306 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 9671208  T
Q  120 ttttcaggacttgaacccgtgacctttcca 149  Q
    ||| ||||| ||||||||||||| ||||||    
T  9671207 tttccaggatttgaacccgtgacatttcca 9671178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 14444851 - 14444730
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||| | |||||     
T  14444851 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttacacaagaggctgtttc 14444752  T
Q  124 caggacttgaacccgtgacctt 145  Q
    ||||||||||||||||||||||    
T  14444751 caggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 10543827 - 10543697
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||  ||||||||||||| |    
T  10543827 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagagg 10543728  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
      |||| ||||||||||||||||||||||||    
T  10543727 ccgtttccaggacttgaacccgtgacctttc 10543697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 12023929 - 12024054
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||||  |||||| ||  ||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||||    
T  12023929 ccggtgcattaaagcttccaaatacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtt 12024028  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | ||||||||||||||||||||||||    
T  12024029 tccaggacttgaacccgtgacctttc 12024054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 14530447 - 14530317
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||| |||||||||||  |||||| |||||| |    
T  14530447 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagagg 14530348  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||||||||    
T  14530347 ctgtttccaggacttgaacccgtgacctttc 14530317  T

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Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 21779269 - 21779395
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||  |||||||||||| | ||    
T  21779269 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccct-gttttacacaagaggctg 21779367  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    | | ||||||||||||||||||||||||    
T  21779368 tctccaggacttgaacccgtgacctttc 21779395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 17668129 - 17668003
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| |||||||||  ||||||||||| ||  ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| |||    
T  17668129 acccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggtt 17668030  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
     ||| ||||||||||||||||||||||    
T  17668029 ctttccaggacttgaacccgtgacctt 17668003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 25249746 - 25249871
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| ||||||| |||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||   ||    
T  25249746 acccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtacacaagagactg 25249845  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    ||| || |||||||||||||||||||    
T  25249846 tttccatgacttgaacccgtgacctt 25249871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 17896381 - 17896258
Alignment:
Q  26 tgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat--ttttacacaagatgttgtttt 123  Q
    ||||| ||||||||| |||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||| |||||||     
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttc 17896282  T
Q  124 caggacttgaacccgtgacctttc 147  Q
     |||||||||| ||||||||||||    
T  17896281 taggacttgaatccgtgacctttc 17896258  T

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Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 25079725 - 25079852
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacc--ctatttttacacaagatgt 117  Q
    ||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||   | ||||||||||||| ||    
T  25079725 acccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaagaggt 25079824  T
Q  118 tgttttcaggacttgaacccgtgacctt 145  Q
    |||||  | |||||||||||||||||||    
T  25079825 tgtttctaagacttgaacccgtgacctt 25079852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 23397891 - 23397765
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| | ||||||||  |||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| | ||    
T  23397891 acccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttacccta-ttttacacaagaggctg 23397793  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| |||||||||||||| |||||||||    
T  23397792 tttccaggacttgaacccatgacctttc 23397765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 17623691 - 17623565
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||| |||||| |||||| || |||||||||| | ||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| |||    
T  17623691 acccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggtt 17623592  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    ||||  |||||||||||||||||||||    
T  17623591 gtttcgaggacttgaacccgtgacctt 17623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 36871618 - 36871509
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| | ||    
T  36871618 acccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacaagaggctg 36871520  T
Q  120 ttttcaggact 130  Q
    ||| |||||||    
T  36871519 tttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 39914314 - 39914440
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgt 117  Q
    ||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| || ||||||||  | ||||||||||||| ||    
T  39914314 acccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggt 39914412  T
Q  118 tgttttcaggacttgaacccgtgacctt 145  Q
    ||||| ||| |||||| |||||||||||    
T  39914413 tgtttccagtacttgatcccgtgacctt 39914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 25641626 - 25641501
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||| ||| ||||||| |||||||||||| | ||| |||||||||||| ||| ||||||||||||||| | ||||||| |||| |||||| ||| ||||    
T  25641626 ccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttcacacaaaatgctgtt 25641527  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | ||||||||||||||||||||||||    
T  25641526 tccaggacttgaacccgtgacctttc 25641501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 32781307 - 32781424
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggac 129  Q
    |||||||||||||||| ||||||| || |||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||| ||||||| |  |||    
T  32781307 caaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagac 32781406  T
Q  130 ttgaacccgtgacctttc 147  Q
    |||||| |||||||||||    
T  32781407 ttgaactcgtgacctttc 32781424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 11514560 - 11514437
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgt 120  Q
    ||||||||| ||||||||||||||||||||||| || ||||| |||||||||| ||||||||||||||||||||||  |  ||||||||||||| | |||    
T  11514560 ccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgt 11514462  T
Q  121 tttcaggacttgaacccgtgacctt 145  Q
    || ||||| ||||||||||||||||    
T  11514461 ttccaggagttgaacccgtgacctt 11514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 24200631 - 24200761
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||||||||| ||||||| | ||||| |||||||||| ||||| ||||||||  || |||||||||||||||||||||||||  ||||||||||||| |    
T  24200631 acccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagagg 24200730  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||| ||||    
T  24200731 ctgtttccaggacttgaacccgtgacttttc 24200761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 17380247 - 17380372
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgt 120  Q
    |||||||||| ||||||||||||| |||||||||| | ||||||| ||| |||| ||||||||| || || ||||||||| ||| ||||||||| |||||    
T  17380247 cccggtgcac-aaagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgt 17380345  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    || || |||||||||||||||||||||    
T  17380346 ttccaagacttgaacccgtgacctttc 17380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 22371158 - 22371059
Alignment:
Q  43 atacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgac 142  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||  || | ||||| |||||||||||||||||||    
T  22371158 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac--gaggctgtttccaggacttgaacccgtgac 22371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 19977726 - 19977850
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgttt 122  Q
    ||||||| ||||||||||||||| || ||| ||| ||||| |||||||||| ||||||||||||||| ||||| |||| |||||||| |||| | |||||    
T  19977726 ggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgttt 19977825  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     ||| ||||||||||||||||||||    
T  19977826 ccagaacttgaacccgtgacctttc 19977850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 24859998 - 24860120
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||||| |||||||||||||||||||||||||  ||||||| | |||||| |||||||||||||||||| |||| | ||||||||| ||| ||||||    
T  24859998 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcagcc-taccatgtttttacaccagaggttgtt 24860096  T
Q  122 ttcaggacttgaacccgtgacctt 145  Q
    | |||| ||| ||||||| |||||    
T  24860097 tccagggcttaaacccgtaacctt 24860120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 5841154 - 5841029
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttacccta-tttttacacaagatgttg 119  Q
    |||||||| |||||||||||||| || |||||||| |||||||||||||||  | | ||||||||||||| |||||||||| ||||||||||| | | ||    
T  5841154 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctg 5841055  T
Q  120 ttttcaggacttgaacccgtgacctt 145  Q
    |||  |||||||||||||||||||||    
T  5841054 tttctaggacttgaacccgtgacctt 5841029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 33795401 - 33795284
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgta-ttgtacgcagccttaccct-atttttacacaagatgttgttttcagga 128  Q
    |||||||||||||||| ||||||| || |||||||||||||| | |||||| |||||||||||||||||||  ||||||| ||||| ||||||| | |||    
T  33795401 caaagctcccgcatacacagggtctgggaaggggtcccacca-taggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccggga 33795303  T
Q  129 cttgaacccgtgacctttc 147  Q
    |||||||||||||||||||    
T  33795302 cttgaacccgtgacctttc 33795284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 26684630 - 26684758
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta--tttttacacaagatgt-t 118  Q
    ||||||||  |||||||||||||||||||||| ||| ||| ||||||||||||  || ||||||||||||||||||| ||  ||||||||||||| || |    
T  26684630 ccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtct 26684729  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||| ||||  |||||||||    
T  26684730 gttttcaggacttaaacctttgacctttc 26684758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 5450384 - 5450284
Alignment:
Q  49 agggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt--acacaagatgttgttttcaggacttgaacccgtgaccttt 146  Q
    ||||||| | ||||||||||||| || ||||||||||||||||||||||| | |||||  |||||||| ||||||| ||||| |||||||||||||||||    
T  5450384 agggtccaggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgaccttt 5450285  T
Q  147 c 147  Q
    |    
T  5450284 c 5450284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 21377092 - 21377209
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggac 129  Q
    |||||||||| |||||||||||| ||| |||||||||||||||| |||| ||||||| ||||||||||||  ||||||||||||| | |||||  | |||    
T  21377092 caaagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgac 21377191  T
Q  130 ttgaacccgtgacctttc 147  Q
    |||||| ||| |||||||    
T  21377192 ttgaactcgtaacctttc 21377209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 99285 - 99399
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    ||||||||||||||| ||||||| |  ||||||| |||||||| |||||||||||||||||||| || | |||||  |||||| | |||||  |||||||    
T  99285 aaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgttttt-tacaagaggctgtttctaggactt 99383  T
Q  132 gaacccgtgacctttc 147  Q
    ||||||||||||||||    
T  99384 gaacccgtgacctttc 99399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 30826158 - 30826052
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| |||||||||||||| | |||||| || ||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||| | |||||     
T  30826158 ggtgcactaaagctcccgcatatgtagggtctgggaagggttcc-accatttggtgtattgtacgcaaccttaccctatttttacacaagaggctgtttc 30826060  T
Q  124 caggactt 131  Q
    || |||||    
T  30826059 caagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 40762242 - 40762321
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc 99  Q
    ||||||||||| ||||||||| |||||||||||||| | || ||||||||||||| ||||||||||||| ||||||||||    
T  40762242 acccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttaccc 40762321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 23145736 - 23145834
Alignment:
Q  50 gggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||| || ||||||||||| | |||||||||||||||||||||| ||  |||||||||||||   |||||||| |||||||||||||||||||||    
T  23145736 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttc 23145834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 23557526 - 23557624
Alignment:
Q  50 gggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||| || ||||||||||| | |||||||||||||||||||||| ||  |||||||||||||   |||||||| |||||||||||||||||||||    
T  23557526 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttc 23557624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 40416879 - 40417005
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||| ||||||| |||||| |||||||||   || |||||||| || | |||||||||||| ||||||| ||||  |||||| |||||| |||    
T  40416879 acccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttatacaagaggtt 40416978  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    |||| || |||||||||||||||||||    
T  40416979 gtttccatgacttgaacccgtgacctt 40417005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 24890533 - 24890460
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacc 98  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttacc 24890460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 39499242 - 39499331
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaag 113  Q
    ||||||| |||||||||||||||||||| | ||  ||||| |||||||||| | ||||||||||||||| |||||||||||||| |||||    
T  39499242 ggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccctatttttatacaag 39499331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 44643649 - 44643564
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    |||||||||| || |||||||||||||||||||| || |||||||||||||||| |||  ||||||||||||||||| || |||||    
T  44643649 cccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgttttt 44643564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 4516360 - 4516487
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttg 119  Q
    |||||| ||| |||||| || |||||||||||||||| |||||||||||||| | ||||||||||||||||| || ||||  ||||||||||||| | ||    
T  4516360 cccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctg 4516459  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    |||  || |||||||   ||||||||||    
T  4516460 tttctagaacttgaatatgtgacctttc 4516487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 25632636 - 25632550
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||| |||||||||||||||| | ||| ||| ||||  |||||||||| ||||||||||||||||||||| ||| |||||    
T  25632636 acccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttt 25632550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 30864427 - 30864536
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    |||||||||| ||||| |||||||||||||||  || || || ||  |||||| ||| ||||||||||| ||||||||||||||||||||||| | ||||    
T  30864427 ccggtgcaccgaagcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccctatttttacacaagaggctgtt 30864526  T
Q  122 ttcaggactt 131  Q
    | || |||||    
T  30864527 tccatgactt 30864536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 13245115 - 13245220
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    |||||||||| ||| ||| ||||||| ||||||||||||||||  ||||| ||||||||||||||||        |||||||| ||||||| ||||||||    
T  13245115 aaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc--------acacaagaggttgtttccaggactt 13245206  T
Q  132 gaacccgtgacctt 145  Q
    |||| |||||||||    
T  13245207 gaactcgtgacctt 13245220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 19615116 - 19614991
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt-acacaagatgttgt 120  Q
    ||||||| |||||||| ||||||||||||| ||| ||||||||| || |||   ||| |||||||||||| |||||||| ||||| | |||||| | |||    
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcc-actattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgt 19615018  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    ||  |||||||||||||||||||||||    
T  19615017 ttcaaggacttgaacccgtgacctttc 19614991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 27573747 - 27573620
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||| ||||| ||||||||| ||||| ||||||  || ||  ||| |||||||| ||||||||||||||||||||||| | ||| ||||||||| | ||    
T  27573747 acccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgtttatacacaagaggctg 27573648  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||  | |||||||||||  |||||||||    
T  27573647 ttgcccggacttgaaccaatgacctttc 27573620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 23488610 - 23488556
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  23488610 acccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccatt 23488556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 31821363 - 31821437
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||||||| |||| | ||| ||||||||||| |||| |||||||||||| || |||||||||||||||    
T  31821363 aaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctattttt 31821437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 40579757 - 40579810
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat 73  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  40579757 acccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 44449407 - 44449519
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttga 133  Q
    ||||| || ||||||||||||| |||||||||||| | || ||||||||||||||||||||| ||| ||||| |  ||||| |||||||| |||| ||||    
T  44449407 ctcccacaaacgcagggtccgggaaggggtcccactattttggtgtattgtacgcagccttatcctgtttttcattcaagaggttgtttttagga-ttga 44449505  T
Q  134 acccgtgacctttc 147  Q
    || |||||||||||    
T  44449506 actcgtgacctttc 44449519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 14517015 - 14516960
Alignment:
Q  206 acaggttgcatcctttgcaaactaggttggttttgccttttcatttggcaatgacta 262  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  14517015 acaggttgcatcctttggaaactaggttgg-tttgccttttcattttgcaatgacta 14516960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 15296421 - 15296533
Alignment:
Q  27 gcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttc 124  Q
    ||||||||||| || |||||||||||||||  ||||| |||||| | || ||| ||||||||||||||||||||| | |||||||||| | | ||||| |    
T  15296421 gcaccaaagcttccacatacgcagggtccgagaagggatcccactattttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttcc 15296520  T
Q  125 aggacttgaaccc 137  Q
     ||||||||||||    
T  15296521 gggacttgaaccc 15296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 34766382 - 34766330
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  34766382 acccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 7214659 - 7214533
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcg--gtgtattgtacgcagccttaccctat-ttttacacaagatgttgt 120  Q
    ||||||| ||| ||| ||||||||||| |||||  ||||| || |||||||    |||||||||||||||||||||||| | ||||||||||||   |||    
T  7214659 ggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactgt 7214560  T
Q  121 tttcaggacttgaacccgtgacctttc 147  Q
    || || ||||||||||| |||||||||    
T  7214559 ttccaagacttgaacccatgacctttc 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 31158459 - 31158577
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcagga 128  Q
    ||||||||||||||||||||||| || ||||||||||||||  || ||| ||||||| |||  ||||||||  ||||||| ||||| | |||||| | ||    
T  31158459 aaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgttttgaaga 31158558  T
Q  129 cttgaacccgtgacctttc 147  Q
    ||| ||||| |||||||||    
T  31158559 ctttaacccttgacctttc 31158577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 45235837 - 45235954
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat--ttttacacaagatgttgttttcaggac 129  Q
    |||||||| ||||||| |||||| || ||||||||||||||||  |||||||  ||| |||||||||||||  ||||||| ||||   |||||  |||||    
T  45235837 aaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttctaggac 45235936  T
Q  130 ttgaacccgtgacctttc 147  Q
    |||||| ||||| |||||    
T  45235937 ttgaactcgtgatctttc 45235954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 41409989 - 41409936
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat 73  Q
    |||||||||||  ||||||||||||| ||||||||||| |||||||||||||||    
T  41409989 acccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 34080228 - 34080176
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    ||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||    
T  34080228 acccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 44604907 - 44604855
Alignment:
Q  93 cttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||    
T  44604907 cttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgacctt 44604855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 24059016 - 24059067
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtatt 83  Q
    ||||||||| |||||||||||||||| |||||||||||||||  ||||||||    
T  24059016 aaagctcccacatacgcagggtccggaaaggggtcccaccatatggtgtatt 24059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 29419949 - 29420025
Alignment:
Q  76 ggtgtattgtacgcagccttac----cctatttt-tacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||||||    ||| |||| ||||||||| ||||||| |||||||||||| |||||||||||    
T  29419949 ggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttc 29420025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 14544189 - 14544139
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||| |||||||||||||||||||||||| | ||||||||| ||||||    
T  14544189 ggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccatt 14544139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 17705566 - 17705496
Alignment:
Q  76 ggtgtattgtacgcagccttaccctatt-tttacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    |||||||||||| ||||||||| || || ||||||||||| |  |||| ||||||||||||||||||||||    
T  17705566 ggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 124922 - 124959
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccgg 57  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  124922 acccggtgcactaaagctcccgcatacgcagggtccgg 124959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 22371239 - 22371202
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccgg 57  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  22371239 acccggtgcactaaagctcccgcatacgcagggtccgg 22371202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 31525831 - 31525771
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtat 82  Q
    ||||| ||| |||||||||||||| |||||||| ||||| |||||||| |||| |||||||    
T  31525831 ccggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

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Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 44521393 - 44521509
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggact 130  Q
    |||||||||| ||| |||  ||| || ||||| |||| ||||| |||||||| || ||||||||||| |  |||||||||||||  |||||| || || |    
T  44521393 aaagctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatt 44521492  T
Q  131 tgaacccgtgacctttc 147  Q
    ||||| |||||||||||    
T  44521493 tgaacgcgtgacctttc 44521509  T

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Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 8576018 - 8575975
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcc 67  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||    
T  8576018 ggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

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Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 2003592 - 2003673
Alignment:
Q  68 caccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||| | ||||||||||||| ||||||||  | ||||||| ||||  | ||||| ||||||||| ||||||||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttc 2003673  T

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Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 19185763 - 19185805
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  19185763 aaagctcccgcatacgcagggtccaggaaggggttccaccatt 19185805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 12315699 - 12315787
Alignment:
Q  59 aaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||| ||| ||| |||||||||||| ||| |||||||| |||||  | |||| | ||||| || ||||||||| |||||||||||    
T  12315699 aaggagtctcactatttggtgtattgtacacagtcttaccctgttttttaataagaagctgtttccatgacttgaactcgtgacctttc 12315787  T

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Target: scaffold0258 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 13032 - 13159
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| | ||    
T  13032 acccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctg 13131  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||| ||||||||||    
T  13132 tttccaggacttgaaccggtgacctttc 13159  T

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Target: scaffold0258; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 16772 - 16733
Alignment:
Q  102 tttttacacaagatgttgttttcaggacttgaacccgtga 141  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  16772 tttttacataagaagttgttttcaggacttgaacccgtga 16733  T

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Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 29355863 - 29355993
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccctattt-ttacacaagatg 116  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||| ||| |||||||||| |    
T  29355863 acccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagagg 29355962  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||||||||    
T  29355963 ctgtttccaggacttgaacccgtgacctttc 29355993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 1347089 - 1346963
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||  | ||    
T  1347089 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagtggctg 1346991  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  1346990 tttccaggacttgaacccgtgacctttc 1346963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 1354765 - 1354891
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  1354765 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 1354863  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||| ||||||||||    
T  1354864 tttccaggacttgaaccagtgacctttc 1354891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 12221922 - 12222053
Alignment:
Q  20 acccggtgcaccaaa-gctcccgcatacgcagggtccggcaaggggtcccaccat--tcggtgtattgtacgcagccttaccct-atttttacacaagat 115  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||     
T  12221922 acccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagag 12222021  T
Q  116 gttgttttcaggacttgaacccgtgacctttc 147  Q
    | ||||| || |||||||||||||||||||||    
T  12222022 gctgtttccaagacttgaacccgtgacctttc 12222053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 9161247 - 9161122
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctatttttacacaagatgttgtt 121  Q
    ||||||| |||||| ||||||||||||||||||  ||||||||||||||||   | |||||||||||||||||||| || ||||||||||||| | ||||    
T  9161247 ggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtttttacacaagaggctgtt 9161148  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | ||||||||||||| ||||||||||    
T  9161147 tccaggacttgaacctgtgacctttc 9161122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 2166418 - 2166548
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctat-ttttacacaagatg 116  Q
    ||||||||||| |||||||||| |||   ||||||||| ||||||||||||||||   ||||||||||||||| ||||| ||| | |||||||||||| |    
T  2166418 acccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagagg 2166517  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||| ||||||||||||||||||||||||    
T  2166518 ttgtttccaggacttgaacccgtgacctttc 2166548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 2178051 - 2178181
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc--ggtgtattgtacgcagccttaccctat-ttttacacaagatg 116  Q
    ||||||||||| |||||||||| |||   ||||||||| ||||||||||||||||   ||||||||||||||| ||||| ||| | |||||||||||| |    
T  2178051 acccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagagg 2178150  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||| ||||||||||||||||||||||||    
T  2178151 ttgtttccaggacttgaacccgtgacctttc 2178181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 7947384 - 7947508
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattc-ggtgtattgtacgcagccttaccct-atttttacacaagatgttgttt 122  Q
    |||||| ||||||||| |||||||| ||||||| |||||| |||||||||  |||||||||||||||||||||||||  |||||||||| || |||||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgttt 7947483  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||| ||||||||||    
T  7947484 ccaggagttgaaccggtgacctttc 7947508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 33138957 - 33138838
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgtt 121  Q
    |||||||| |||||| | |||||| |||||||||| || ||||||||||||| |||||||||||||| ||||||| ||  |||||| |||||| ||||||    
T  33138957 cggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtt 33138858  T
Q  122 ttcaggacttgaacccgtga 141  Q
    | ||||||||||||||||||    
T  33138857 tccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 3815085 - 3815213
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgtt 118  Q
    ||||||||||| |||||| ||||||||| ||||| ||| || ||||||||||||| |||||||||||||||| | |||| || ||||||||||| |   |    
T  3815085 acccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtct 3815184  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    |||| ||||||||||||||||||| ||||    
T  3815185 gtttccaggacttgaacccgtgacatttc 3815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 26097285 - 26097178
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||||||  |||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  26097285 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 26097187  T
Q  120 ttttcagga 128  Q
    ||| |||||    
T  26097186 tttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 32579540 - 32579436
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggactt 131  Q
    |||||||||||||| |||||||| || |||||||||||||||| || ||||||||||||| |||||| |||||||| || ||| | ||||| ||||||||    
T  32579540 aaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggctgtttccaggactt 32579441  T
Q  132 gaacc 136  Q
    |||||    
T  32579440 gaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 1941979 - 1941856
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgtt 121  Q
    |||||||| ||| ||||||||||| || | ||| | | ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  1941979 cggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtt 1941880  T
Q  122 ttcaggacttgaacccgtgacctt 145  Q
    | || ||||| || ||| ||||||    
T  1941879 tacatgacttcaatccgcgacctt 1941856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 25557850 - 25557743
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||| ||  |||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  25557850 acccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 25557752  T
Q  120 ttttcagga 128  Q
    ||| |||||    
T  25557751 tttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 13904990 - 13905115
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt-tacacaagatgttg 119  Q
    |||||||||| ||||||||   ||||||||||| ||| || |||||| |||||| |||| |||||| ||||||||||||| |||| ||||||||| || |    
T  13904990 cccggtgcac-aaagctccgtgatacgcagggttcgggaaagggtcc-accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcg 13905087  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||| |||||||||||||    
T  13905088 ttttcaggacttgagcccgtgacctttc 13905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 18277201 - 18277328
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    ||||||||||  |||||||||||||||| || |||  | |||||||||||||||| |||||  ||||| || ||||||||| |||||||||||||| | |    
T  18277201 acccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggct 18277300  T
Q  119 gttttcaggacttgaacccgtgaccttt 146  Q
    |||| || || |||||||||||||||||    
T  18277301 gtttccaagatttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 28007714 - 28007628
Alignment:
Q  59 aaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgaccttt 146  Q
    ||||||||||| |||| ||||||||||||||||||| |||||  |||||||||||| | | ||| |||||||||||||||||||||||    
T  28007714 aaggggtcccagcatttggtgtattgtacgcagcctgaccct-gttttacacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 23240837 - 23240958
Alignment:
Q  25 gtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttc 124  Q
    |||||| ||||||||||||||||||  ||||   |||||||||||||| | ||| |||||||||||  ||||||||  |||||||||||| | ||||| |    
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccct-gttttacacaagaggctgtttcc 23240935  T
Q  125 aggacttgaacccgtgacctttc 147  Q
    |||||||| ||| ||||||||||    
T  23240936 aggacttgcacctgtgacctttc 23240958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 12889553 - 12889425
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtccca-ccattcggtgtattgtacgcagccttaccctattttt-acacaagatgtt 118  Q
    |||| ||||| ||||||||| || ||  ||||||||| ||||||||||| |  || ||||||||||| |||||||| |||| ||||| |||||||| | |    
T  12889553 cccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatcgtttaggtgtattgtatgcagccttgccctgtttttaacacaagaggct 12889454  T
Q  119 gttttcaggacttgaacccgtgacctttc 147  Q
    ||||||| |||||||||| ||||||||||    
T  12889453 gttttcaagacttgaacctgtgacctttc 12889425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 13267852 - 13267788
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattg 84  Q
    |||||||||||  ||||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  13267852 acccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 14553626 - 14553511
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggact 130  Q
    ||||||||||||| |||||||    ||||||||||||||  || |||||||| ||| |||||||||||||||||| |||||||| | | ||| |||||||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  131 tgaacccgtgaccttt 146  Q
    |||||| |||||||||    
T  14553526 tgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 15866064 - 15866173
Alignment:
Q  37 tcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggacttgaac 135  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||  |||||||| |||||||  |||||||  |||| | ||||| ||||| ||||||    
T  15866064 tcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtat--tacgcagctttaccctgttttttacttaagaggctgtttccaggaattgaac 15866161  T
Q  136 ccgtgacctttc 147  Q
    || |||||||||    
T  15866162 ccatgacctttc 15866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 22967287 - 22967172
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtac------gcagccttaccctatttttacacaagatgttgttttcaggac 129  Q
    |||||||||| |||||||||   |||||||||||||||| |||||||||||       ||||||||| ||||||||||||||||| ||||||| || |||    
T  22967287 ctcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgac 22967188  T
Q  130 ttgaacccgtgacctt 145  Q
    ||||||  ||||||||    
T  22967187 ttgaactagtgacctt 22967172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 23821106 - 23821221
Alignment:
Q  36 ctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtac------gcagccttaccctatttttacacaagatgttgttttcaggac 129  Q
    |||||||||| |||||||||   |||||||||||||||| |||||||||||       ||||||||| ||||||||||||||||| ||||||| || |||    
T  23821106 ctcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgac 23821205  T
Q  130 ttgaacccgtgacctt 145  Q
    ||||||  ||||||||    
T  23821206 ttgaactagtgacctt 23821221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 17432475 - 17432339
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcg--gtgtattgtacgcagccttacccta-------tttttacac 110  Q
    ||||||||||| ||||||||||||| | |||| ||||| ||  |||| |||||||    ||||||||||| ||||||||||||        |||||||||    
T  17432475 acccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgttttttacac 17432376  T
Q  111 aagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  17432375 aagatgttgtttccaggacttgaacctgtgacctttc 17432339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 23930138 - 23930205
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgca 90  Q
    |||||||| |||||||||||||| ||||||||||  |||||||||||||||  |||||||||||||||    
T  23930138 cggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 6808522 - 6808468
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  6808522 acccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 17448389 - 17448323
Alignment:
Q  82 ttgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||  ||||||||||||||||||||    
T  17448389 ttgtacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttc 17448323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 24097692 - 24097580
Alignment:
Q  32 aaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggact 130  Q
    |||||| ||||||||||||||||||| |||||||||||||||| ||    ||||| |||||||||||||  |||||| |||||| | || ||  ||||||    
T  24097692 aaagcttccgcatacgcagggtccgggaaggggtcccaccatttgg----ttgtaagcagccttaccctgttttttatacaagaggctggttcgaggact 24097597  T
Q  131 tgaacccgtgacctttc 147  Q
    | ||| |||||||||||    
T  24097596 taaactcgtgacctttc 24097580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 3116139 - 3116259
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||| || |||||||||||||||||| ||||||  ||||||||||||||  || |||||||||| ||||| |       ||||||| |||||| ||||    
T  3116139 ccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtc-------atttttatacaagaggttg 3116231  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| || ||||||||||| |||||||||    
T  3116232 tttccatgacttgaacccatgacctttc 3116259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 4136590 - 4136648
Alignment:
Q  85 tacgcagccttaccctat-ttttacacaagatgttgttttcaggacttgaacccgtgac 142  Q
    |||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  4136590 tacgcaaccttaccctgtattttacacaagatgttgtttttaggacttgaacccgtgac 4136648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 12886040 - 12885986
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||    
T  12886040 acccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccatt 12885986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 12892136 - 12892082
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| |||||||||||||| || |||||||| ||||||||||||||||    
T  12892136 acccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 12892082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 383768 - 383837
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgc 89  Q
    |||||||| ||  |||||||||||||||||||||| |  |||||||||||| ||| ||||||||||||||    
T  383768 acccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 8409311 - 8409242
Alignment:
Q  79 gtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||||||||||||| ||||| |||||||| |  |||| ||||||||||| ||||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttc 8409242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 15865885 - 15865993
Alignment:
Q  40 cgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgttgttttcaggacttgaaccc 137  Q
    |||| ||||||||||| | |||||||||||||||| |||||||  |||||||| ||||||  | |||||||  |||| | ||||| ||||| ||||||||    
T  15865885 cgcaaacgcagggtccaggaaggggtcccaccatttggtgtat--tacgcagctttaccctgtttttttacgtaagaggctgtttccaggaattgaaccc 15865982  T
Q  138 gtgacctttcc 148  Q
     ||||||||||    
T  15865983 atgacctttcc 15865993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 10734914 - 10734965
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    ||||||| || |||||||||||||||||||||||||| |||||| |||||||    
T  10734914 cccggtggactaaagctcccgcatacgcagggtccgggaagggggcccacca 10734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 11395886 - 11395836
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca 72  Q
    |||||| || |||||||||||||||||||| ||||| ||||||||||||||    
T  11395886 ccggtggactaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 20400791 - 20400666
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt-acacaagatgttgtt 121  Q
    |||||||| |||| | | ||||||| ||||| ||| || ||||||| | |||  ||||| ||||||||| |||||||| ||||| ||||||||  |||||    
T  20400791 cggtgcactaaagtttctgcatacgtagggttcggaaaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtt 20400692  T
Q  122 ttcaggacttgaacccgtgacctttc 147  Q
    | ||  ||||||||| ||||||||||    
T  20400691 tccataacttgaacctgtgacctttc 20400666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 14975098 - 14975152
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccatt 74  Q
    ||||||||||| ||| |||||||||| || |||| ||| ||||||||||||||||    
T  14975098 acccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccatt 14975152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 24734752 - 24734683
Alignment:
Q  39 ccgcatacgcagggtccggcaaggggtcccacc--attcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||||| ||||| |||||||||||||   || | ||||||||||||| ||||||||| |||||    
T  24734752 ccgcatacgcaggatccgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgttttt 24734683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 30786382 - 30786427
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggt 65  Q
    ||||||||||| |||||||||||||||||| ||||| | |||||||    
T  30786382 acccggtgcactaaagctcccgcatacgcacggtccaggaaggggt 30786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 11849159 - 11849063
Alignment:
Q  42 catacgcagggtccggcaaggggtcccacca-ttcggtgtattgtacgcagccttaccctattttt-acacaagatgttgttttcaggacttgaacc 136  Q
    ||||||||| || ||| |||||||||||||| || ||||||||||  ||| | ||| ||| ||||| |||||||| ||||||| | |||||||||||    
T  11849159 catacgcagagttcgggaaggggtcccaccattttggtgtattgtgggcaactttatcctgtttttaacacaagaggttgtttcctggacttgaacc 11849063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 106
Target Start/End: Original strand, 14341132 - 14341164
Alignment:
Q  74 tcggtgtattgtacgcagccttaccctattttt 106  Q
    ||||||||||||||||||||||||||| |||||    
T  14341132 tcggtgtattgtacgcagccttaccctgttttt 14341164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 18254644 - 18254556
Alignment:
Q  21 cccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttaca 109  Q
    |||||||||||||| |||||  ||||| || ||| |  |||||||||||| |||  | |||||||| ||||| ||||||| ||||||||    
T  18254644 cccggtgcaccaaaactcccatatacgtagagtctgtgaaggggtcccactattttgggtattgtatgcagctttaccctgtttttaca 18254556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 32728169 - 32728292
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttt 122  Q
    ||||||| |||| ||||||||||| |||||| || || |||  |||| ||| ||| |||||||| ||| ||||||||  |||||||| |||| |||||||    
T  32728169 ggtgcactaaagttcccgcatacgtagggtctgggaaaggg-accactatttggtatattgtacacagtcttaccctgttttttacataagaggttgttt 32728267  T
Q  123 tcaggacttgaacccgtgacctttc 147  Q
     ||  ||||||| | ||||||||||    
T  32728268 ccaaaacttgaatctgtgacctttc 32728292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 10937 - 10811
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgtt 118  Q
    |||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||  ||||||||||||| |||    
T  10937 acccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggtt 10838  T
Q  119 gttttcaggacttgaacccgtgacctt 145  Q
    ||||||||  |||||||||||||||||    
T  10837 gttttcagaccttgaacccgtgacctt 10811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 1599 - 1721
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||| |||  |||||||||||| ||||||||    
T  1599 ggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcct-gttttacacaagaggttgtttt 1697  T
Q  124 caggacttgaacccgtgacctttc 147  Q
    |||||||||||||| |||||||||    
T  1698 caggacttgaacccatgacctttc 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 30704 - 30578
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||  |||||||||||| | ||    
T  30704 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccct-gttttacacaagaggctg 30606  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||| ||||||||||    
T  30605 tttccaggacttgaaccggtgacctttc 30578  T

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Target: scaffold0015 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 48642 - 48758
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||| | ||    
T  48642 acccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gttttacacaagaggctg 48740  T
Q  120 ttttcaggacttgaaccc 137  Q
    ||| ||  ||||||||||    
T  48741 tttccaccacttgaaccc 48758  T

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Target: scaffold0223 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 11252 - 11130
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttt 123  Q
    ||||||| | |||||||||||| ||||||||||| |||| ||||||||||| ||||||||||| ||||||||| | |  |||||||||||| | |||||     
T  11252 ggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagcctta-ctttgttttacacaagaggctgtttc 11154  T
Q  124 caggacttgaacccgtgacctttc 147  Q
    ||||||||||||||||||||||||    
T  11153 caggacttgaacccgtgacctttc 11130  T

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Target: scaffold0187 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 10058 - 10184
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||||||||   |||||| ||||| ||||||||||| |||||||||||| ||| |||||||||||||||| ||||| ||  |||||||||||| | ||    
T  10058 acccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactct-gttttacacaagaggctg 10156  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  10157 tttccaggacttgaacccgtgacctttc 10184  T

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Target: scaffold0187; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 20386 - 20512
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttg 119  Q
    |||||||||||   |||||| ||||| ||||||||||| |||||||||||| ||| |||||||||||||||| ||||| ||  |||||||||||| | ||    
T  20386 acccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactct-gttttacacaagaggctg 20484  T
Q  120 ttttcaggacttgaacccgtgacctttc 147  Q
    ||| ||||||||||||||||||||||||    
T  20485 tttccaggacttgaacccgtgacctttc 20512  T

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Target: scaffold0049 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 59106 - 58976
Alignment:
Q  20 acccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccacca--ttcggtgtattgtacgcagccttaccct-atttttacacaagatg 116  Q
    ||||| ||||| ||||||||||||||||||| ||| || ||||||||||||||  || |||||||||||||||| ||||||||  |||||| |||||| |    
T  59106 acccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagagg 59007  T
Q  117 ttgttttcaggacttgaacccgtgacctttc 147  Q
     ||||| ||||||||||||||||||||||||    
T  59006 ctgtttccaggacttgaacccgtgacctttc 58976  T

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Target: scaffold0180 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 24143 - 24220
Alignment:
Q  22 ccggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc 99  Q
    ||||||||| | |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  24143 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0954 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 3668 - 3576
Alignment:
Q  23 cggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccctat-ttttacacaaga 114  Q
    |||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  3668 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaaga 3576  T

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Target: scaffold0018 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 72879 - 72999
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaaga-tgttgtt 121  Q
    ||||||| |||||||||||||||||||| ||||| ||||||| | |||||| ||||||||||| ||||||||||| |  |||||||||||||   |||||    
T  72879 ggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtt 72978  T
Q  122 ttcaggacttgaacccgtgac 142  Q
    |  ||||||||||||||||||    
T  72979 tctaggacttgaacccgtgac 72999  T

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Target: scaffold0036 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 35067 - 35152
Alignment:
Q  62 gggtcccaccattcggtgtattgtacgcagccttaccctatttt--tacacaagatgttgttttcaggacttgaacccgtgacctt 145  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||   ||||||||   ||||||||||||||||||||||||||||    
T  35067 gggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgacctt 35152  T

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Target: scaffold0254 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 4258 - 4156
Alignment:
Q  49 agggtccggcaaggggtcccaccattc---ggtgtattgtacgcagccttaccctat-ttttacacaagatgttgttttcaggacttgaacccgtgacct 144  Q
    ||||||||| |||||||||||||| |    ||||||||||||||| ||||| ||| | |||||||||||| ||||||| |||||||||||||||||||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacct 4159  T
Q  145 ttc 147  Q
    |||    
T  4158 ttc 4156  T

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Target: scaffold0167 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 23715 - 23606
Alignment:
Q  31 caaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaagatgttgttttcaggac 129  Q
    |||||||||| ||||| || |||| || |||||||||||||||| | |  |||||||||||||| |||||  ||||||||||||| ||||||| || |||    
T  23715 caaagctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagac 23616  T
Q  130 ttgaacccgt 139  Q
    ||||||||||    
T  23615 ttgaacccgt 23606  T

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Target: scaffold0867 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 3719 - 3798
Alignment:
Q  62 gggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaagatgttgttttcaggacttgaacccgtgac 142  Q
    ||||||||||||| ||||||||||||||| | ||||| | | ||||||||||  ||||||||||| |||||||||| ||||    
T  3719 gggtcccaccatttggtgtattgtacgcaacgttaccttgtatttacacaag-ggttgttttcagaacttgaacccatgac 3798  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 226456 - 226542
Alignment:
Q  63 ggtcccaccattcggtgtattgtacgcagccttaccc--tatttttacacaagatgttgttttcaggacttgaacccgtgacctttc 147  Q
    |||||||||||| | ||||||||| ||||||||||||  | |||||| |||||| | |||||  |||||||||| ||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttc 226542  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 58651 - 58699
Alignment:
Q  34 agctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtat 82  Q
    ||||||||||||| |||||||||  |||||||| |||||||||||||||    
T  58651 agctcccgcatacacagggtccgagaaggggtctcaccattcggtgtat 58699  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 24771 - 24696
Alignment:
Q  24 ggtgcaccaaagctcccgcatacgcagggtccggcaaggggtcccaccattcggtgtattgtacgcagccttaccc 99  Q
    |||||||  ||||||||| |||||||||||| || ||||||  |||| ||| |||||||| ||||||| |||||||    
T  24771 ggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcagtcttaccc 24696  T

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