View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21213_low_65 (Length: 244)
Name: NF21213_low_65
Description: NF21213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21213_low_65 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33966414 - 33966188
Alignment:
| Q |
1 |
ctcactccctcctctccctccgctctaaaccaaccagactctccgtttcagcttcagcactctcagcttcaggtagtcataacaacaacctcacaccttt |
100 |
Q |
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| T |
33966414 |
ctcactccctcctctccctccgctctaaaccaaccagactctccgtttcagcttcagcactctcagcctcaggtagtcataacaacaacctcacaccttt |
33966315 |
T |
|
| Q |
101 |
tcccatttactgtatttcatgcaattactatataccatatatatgctagatattgttatcataatgtaatggaaatatgtaattggaggttattttttat |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33966314 |
tcccatttactgtatttcatgcaattactatatactatatatatgctagatattgttatcataatgtaatggaaatatgtaattggaggttattttttat |
33966215 |
T |
|
| Q |
201 |
gcacgagtaggaaatgatggatctact |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
33966214 |
gcacgagtaggaaatgatggatctact |
33966188 |
T |
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