View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21214_high_14 (Length: 224)
Name: NF21214_high_14
Description: NF21214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21214_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 17246741 - 17246934
Alignment:
| Q |
15 |
acagagaaagtcagaagggaatgacataatgtgggagaaagttgatgaaagtatcaagtttaaaatttgaatgtgatgcaatatatataccatgaaatta |
114 |
Q |
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| T |
17246741 |
acagagaaagtcagaagggaatgacataatgtgggagaaagttgatgaaagtatcaagtttaaaatttgaatgtgatgcgatatatacaccatgaaatta |
17246840 |
T |
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| Q |
115 |
ccaagtttttgaaaatttaaagaatgatgtataatttttaaagaatgatatgtagttttaagtatatcaaagacgataaatagacatctatatt |
208 |
Q |
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| T |
17246841 |
ccaagtttttgaaaatttaaagaatgatgtataatttttaaagaatgatatgtagttttaagtatatcaaagacgataaatagacatctatatt |
17246934 |
T |
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