View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21215_high_14 (Length: 385)

Name: NF21215_high_14
Description: NF21215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21215_high_14
NF21215_high_14
[»] chr4 (10 HSPs)
chr4 (10-156)||(2622124-2622270)
chr4 (315-385)||(2622338-2622408)
chr4 (78-150)||(2466426-2466499)
chr4 (103-151)||(19140073-19140121)
chr4 (356-385)||(5609315-5609344)
chr4 (356-385)||(9517754-9517783)
chr4 (356-385)||(34844871-34844900)
chr4 (356-385)||(37109335-37109364)
chr4 (356-385)||(40058965-40058994)
chr4 (356-385)||(49287913-49287942)
[»] chr7 (7 HSPs)
chr7 (103-151)||(13901181-13901229)
chr7 (354-385)||(21558191-21558222)
chr7 (351-385)||(4566407-4566441)
chr7 (103-141)||(13575270-13575308)
chr7 (356-385)||(26459394-26459423)
chr7 (356-385)||(41907626-41907655)
chr7 (356-384)||(25655212-25655240)
[»] chr2 (5 HSPs)
chr2 (103-151)||(24550522-24550570)
chr2 (356-385)||(19244172-19244201)
chr2 (356-385)||(40416374-40416403)
chr2 (356-385)||(42922478-42922507)
chr2 (348-380)||(15954035-15954067)
[»] chr5 (3 HSPs)
chr5 (351-385)||(29075844-29075878)
chr5 (355-385)||(31074295-31074325)
chr5 (356-385)||(14285224-14285253)
[»] chr3 (3 HSPs)
chr3 (355-385)||(10969900-10969930)
chr3 (356-385)||(28703388-28703417)
chr3 (356-385)||(53234023-53234052)
[»] chr1 (10 HSPs)
chr1 (103-141)||(23966163-23966201)
chr1 (355-385)||(29753712-29753742)
chr1 (355-385)||(33700756-33700786)
chr1 (356-385)||(2799925-2799954)
chr1 (356-385)||(8077702-8077731)
chr1 (356-385)||(9500468-9500497)
chr1 (356-385)||(15059515-15059544)
chr1 (356-385)||(18646908-18646937)
chr1 (356-385)||(40810530-40810559)
chr1 (356-384)||(8177166-8177194)
[»] scaffold0238 (1 HSPs)
scaffold0238 (356-385)||(2695-2724)
[»] chr8 (3 HSPs)
chr8 (351-384)||(13129732-13129765)
chr8 (356-385)||(18540361-18540390)
chr8 (356-385)||(33017277-33017306)
[»] chr6 (2 HSPs)
chr6 (356-385)||(11306158-11306187)
chr6 (356-385)||(11448926-11448955)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 5e-75; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 2622124 - 2622270
Alignment:
Q  10 ataatactactatgcttttaagctcgaagagcatacaaagtaaaactgatgtaagagtctttaaatcggctccttagatgcaaatcggaagtaaaacaaa 109  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2622124 ataatactactatgcttttaagctcgaagagcgtacaaagtaaaactgatgtaagagtctttaaatcggctccttagatgcaaatcggaagtaaaacaaa 2622223  T
Q  110 attcaagttcaagtctataacaatcatgagcacattggatactattt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2622224 attcaagttcaagtctataacaatcatgagcacattggatactattt 2622270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 315 - 385
Target Start/End: Original strand, 2622338 - 2622408
Alignment:
Q  315 tgttacatttaagatcaagcattgaggaggcaaattcatctaaattggcaccagagagaatcgaacctgag 385  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2622338 tgttacatttaagatcaagcattgaggaggcaaatttatctaaattggcaccagagagaatcgaacctgag 2622408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 2466499 - 2466426
Alignment:
Q  78 gctccttagatgcaaatcggaagtaaaacaaaattcaa-gttcaagtctataacaatcatgagcacattggata 150  Q
    ||||||||||||||||| | | |||||||| ||||||| ||||||||||||||||| ||||| ||| |||||||    
T  2466499 gctccttagatgcaaattgcatgtaaaacagaattcaaagttcaagtctataacaaacatgaacacgttggata 2466426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 19140121 - 19140073
Alignment:
Q  103 aaacaaaattcaagttcaagtctataacaatcatgagcacattggatac 151  Q
    |||||||||| ||||||||||||||||||| ||||||||  ||||||||    
T  19140121 aaacaaaattaaagttcaagtctataacaaacatgagcatgttggatac 19140073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 5609315 - 5609344
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  5609315 aaattggcaccagagagaatcgaacctgag 5609344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 9517754 - 9517783
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  9517754 aaattggcaccagagagaatcgaacctgag 9517783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 34844871 - 34844900
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  34844871 aaattggcaccagagagaatcgaacctgag 34844900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 37109335 - 37109364
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgag 37109364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 40058965 - 40058994
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  40058965 aaattggcaccagagagaatcgaacctgag 40058994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 49287942 - 49287913
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  49287942 aaattggcaccagagagaatcgaacctgag 49287913  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 13901229 - 13901181
Alignment:
Q  103 aaacaaaattcaagttcaagtctataacaatcatgagcacattggatac 151  Q
    |||||||||| ||||||||||||||||||| ||||||||  ||||||||    
T  13901229 aaacaaaattaaagttcaagtctataacaaacatgagcatgttggatac 13901181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 354 - 385
Target Start/End: Complemental strand, 21558222 - 21558191
Alignment:
Q  354 ctaaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||||    
T  21558222 ctaaattggcaccagagagaatcgaacctgag 21558191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 351 - 385
Target Start/End: Original strand, 4566407 - 4566441
Alignment:
Q  351 catctaaattggcaccagagagaatcgaacctgag 385  Q
    |||||||||||||||||||||||||| ||||||||    
T  4566407 catctaaattggcaccagagagaatcaaacctgag 4566441  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 13575308 - 13575270
Alignment:
Q  103 aaacaaaattcaagttcaagtctataacaatcatgagca 141  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  13575308 aaacaaaattaaagttcaagtctataacaaacatgagca 13575270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 26459394 - 26459423
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgag 26459423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 41907626 - 41907655
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  41907626 aaattggcaccagagagaatcgaacctgag 41907655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 25655212 - 25655240
Alignment:
Q  356 aaattggcaccagagagaatcgaacctga 384  Q
    |||||||||||||||||||||||||||||    
T  25655212 aaattggcaccagagagaatcgaacctga 25655240  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 24550522 - 24550570
Alignment:
Q  103 aaacaaaattcaagttcaagtctataacaatcatgagcacattggatac 151  Q
    |||||||||| ||||||||||||||||||| ||||||||  ||||||||    
T  24550522 aaacaaaattaaagttcaagtctataacaaacatgagcatgttggatac 24550570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 19244201 - 19244172
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  19244201 aaattggcaccagagagaatcgaacctgag 19244172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 40416374 - 40416403
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  40416374 aaattggcaccagagagaatcgaacctgag 40416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 42922507 - 42922478
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  42922507 aaattggcaccagagagaatcgaacctgag 42922478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Complemental strand, 15954067 - 15954035
Alignment:
Q  348 attcatctaaattggcaccagagagaatcgaac 380  Q
    ||||||| |||||||||||||||||||||||||    
T  15954067 attcatcaaaattggcaccagagagaatcgaac 15954035  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 351 - 385
Target Start/End: Complemental strand, 29075878 - 29075844
Alignment:
Q  351 catctaaattggcaccagagagaatcgaacctgag 385  Q
    |||||||||||||||||||||||||||||| ||||    
T  29075878 catctaaattggcaccagagagaatcgaacatgag 29075844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 355 - 385
Target Start/End: Complemental strand, 31074325 - 31074295
Alignment:
Q  355 taaattggcaccagagagaatcgaacctgag 385  Q
    |||||||||||||||||||||||||||||||    
T  31074325 taaattggcaccagagagaatcgaacctgag 31074295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 14285253 - 14285224
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  14285253 aaattggcaccagagagaatcgaacctgag 14285224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 355 - 385
Target Start/End: Original strand, 10969900 - 10969930
Alignment:
Q  355 taaattggcaccagagagaatcgaacctgag 385  Q
    |||||||||||||||||||||||||||||||    
T  10969900 taaattggcaccagagagaatcgaacctgag 10969930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 28703388 - 28703417
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  28703388 aaattggcaccagagagaatcgaacctgag 28703417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 53234023 - 53234052
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  53234023 aaattggcaccagagagaatcgaacctgag 53234052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 23966201 - 23966163
Alignment:
Q  103 aaacaaaattcaagttcaagtctataacaatcatgagca 141  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  23966201 aaacaaaattaaagttcaagtctataacaaacatgagca 23966163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 355 - 385
Target Start/End: Complemental strand, 29753742 - 29753712
Alignment:
Q  355 taaattggcaccagagagaatcgaacctgag 385  Q
    |||||||||||||||||||||||||||||||    
T  29753742 taaattggcaccagagagaatcgaacctgag 29753712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 355 - 385
Target Start/End: Original strand, 33700756 - 33700786
Alignment:
Q  355 taaattggcaccagagagaatcgaacctgag 385  Q
    |||||||||||||||||||||||||||||||    
T  33700756 taaattggcaccagagagaatcgaacctgag 33700786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 2799954 - 2799925
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  2799954 aaattggcaccagagagaatcgaacctgag 2799925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 8077731 - 8077702
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  8077731 aaattggcaccagagagaatcgaacctgag 8077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 9500468 - 9500497
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  9500468 aaattggcaccagagagaatcgaacctgag 9500497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 15059515 - 15059544
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  15059515 aaattggcaccagagagaatcgaacctgag 15059544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 18646937 - 18646908
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  18646937 aaattggcaccagagagaatcgaacctgag 18646908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 40810559 - 40810530
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  40810559 aaattggcaccagagagaatcgaacctgag 40810530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 8177166 - 8177194
Alignment:
Q  356 aaattggcaccagagagaatcgaacctga 384  Q
    |||||||||||||||||||||||||||||    
T  8177166 aaattggcaccagagagaatcgaacctga 8177194  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 2695 - 2724
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  2695 aaattggcaccagagagaatcgaacctgag 2724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 384
Target Start/End: Complemental strand, 13129765 - 13129732
Alignment:
Q  351 catctaaattggcaccagagagaatcgaacctga 384  Q
    |||| |||||||||||||||||||||||||||||    
T  13129765 catccaaattggcaccagagagaatcgaacctga 13129732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 18540390 - 18540361
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  18540390 aaattggcaccagagagaatcgaacctgag 18540361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 33017306 - 33017277
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  33017306 aaattggcaccagagagaatcgaacctgag 33017277  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 11306158 - 11306187
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  11306158 aaattggcaccagagagaatcgaacctgag 11306187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Complemental strand, 11448955 - 11448926
Alignment:
Q  356 aaattggcaccagagagaatcgaacctgag 385  Q
    ||||||||||||||||||||||||||||||    
T  11448955 aaattggcaccagagagaatcgaacctgag 11448926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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