View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21215_high_45 (Length: 208)

Name: NF21215_high_45
Description: NF21215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21215_high_45
NF21215_high_45
[»] chr5 (21 HSPs)
chr5 (1-176)||(18169668-18169843)
chr5 (121-208)||(16773841-16773929)
chr5 (121-207)||(30109263-30109349)
chr5 (121-204)||(22020816-22020900)
chr5 (121-204)||(29075819-29075903)
chr5 (121-208)||(8278229-8278317)
chr5 (121-204)||(43442234-43442318)
chr5 (135-208)||(17028232-17028306)
chr5 (121-204)||(12883878-12883962)
chr5 (162-206)||(14285197-14285241)
chr5 (121-208)||(21589322-21589410)
chr5 (126-204)||(17761314-17761393)
chr5 (135-201)||(29173531-29173598)
chr5 (135-204)||(14495773-14495843)
chr5 (135-204)||(18206614-18206684)
chr5 (162-204)||(27841015-27841057)
chr5 (135-208)||(4793048-4793130)
chr5 (162-203)||(25627096-25627137)
chr5 (119-183)||(29981990-29982054)
chr5 (121-204)||(29692340-29692424)
chr5 (162-206)||(34984842-34984886)
[»] scaffold0258 (1 HSPs)
scaffold0258 (126-208)||(15282-15365)
[»] chr8 (22 HSPs)
chr8 (135-208)||(968396-968470)
chr8 (121-208)||(16852374-16852462)
chr8 (121-208)||(29858003-29858091)
chr8 (121-208)||(3624614-3624701)
chr8 (121-208)||(8485033-8485121)
chr8 (121-207)||(28783095-28783182)
chr8 (121-208)||(11819810-11819898)
chr8 (135-208)||(6536554-6536628)
chr8 (135-204)||(11492041-11492111)
chr8 (136-208)||(19703456-19703529)
chr8 (135-203)||(23361617-23361686)
chr8 (163-208)||(29431045-29431090)
chr8 (135-203)||(35641869-35641938)
chr8 (121-208)||(2203526-2203614)
chr8 (136-204)||(7140747-7140815)
chr8 (121-208)||(44780068-44780156)
chr8 (163-200)||(3826774-3826811)
chr8 (165-206)||(11928730-11928771)
chr8 (162-203)||(16843790-16843831)
chr8 (121-197)||(40791849-40791926)
chr8 (121-192)||(7347887-7347959)
chr8 (162-206)||(33017250-33017294)
[»] chr1 (35 HSPs)
chr1 (135-208)||(50901616-50901689)
chr1 (140-208)||(31383771-31383840)
chr1 (121-200)||(12587312-12587391)
chr1 (135-208)||(44126429-44126503)
chr1 (129-201)||(40814370-40814443)
chr1 (121-208)||(6122828-6122916)
chr1 (121-208)||(18037567-18037655)
chr1 (121-204)||(52336728-52336812)
chr1 (135-197)||(3799951-3800014)
chr1 (135-201)||(27476739-27476806)
chr1 (135-204)||(42983342-42983412)
chr1 (135-200)||(51814536-51814602)
chr1 (136-208)||(21547449-21547522)
chr1 (126-204)||(17439955-17440035)
chr1 (136-203)||(24047071-24047139)
chr1 (121-208)||(36124867-36124955)
chr1 (136-206)||(1094561-1094632)
chr1 (121-199)||(2220015-2220094)
chr1 (165-204)||(9117157-9117196)
chr1 (162-204)||(2799900-2799942)
chr1 (162-208)||(12370197-12370243)
chr1 (162-200)||(26232357-26232395)
chr1 (162-204)||(33700769-33700811)
chr1 (135-200)||(44961807-44961873)
chr1 (135-208)||(52116749-52116823)
chr1 (162-203)||(3265963-3266004)
chr1 (140-200)||(13578690-13578751)
chr1 (163-204)||(15786317-15786358)
chr1 (162-206)||(1247149-1247193)
chr1 (162-206)||(4566584-4566628)
chr1 (136-199)||(12662325-12662389)
chr1 (164-204)||(17410269-17410309)
chr1 (142-201)||(19940847-19940907)
chr1 (164-208)||(30689046-30689090)
chr1 (162-206)||(36371506-36371550)
[»] chr3 (36 HSPs)
chr3 (121-204)||(52769937-52770021)
chr3 (121-208)||(10445093-10445181)
chr3 (135-204)||(44743823-44743893)
chr3 (126-207)||(5166463-5166543)
chr3 (136-208)||(32651407-32651480)
chr3 (121-204)||(2667900-2667984)
chr3 (121-204)||(10499063-10499147)
chr3 (141-208)||(12761546-12761614)
chr3 (121-208)||(20501730-20501817)
chr3 (121-203)||(14339649-14339732)
chr3 (126-204)||(31520564-31520643)
chr3 (135-204)||(4844479-4844549)
chr3 (135-204)||(4870175-4870245)
chr3 (142-203)||(36720420-36720482)
chr3 (121-201)||(47454571-47454652)
chr3 (121-208)||(8075081-8075169)
chr3 (121-204)||(51903832-51903916)
chr3 (166-205)||(17765164-17765203)
chr3 (166-205)||(19066484-19066523)
chr3 (161-208)||(21960585-21960632)
chr3 (130-208)||(30510162-30510241)
chr3 (126-208)||(54990736-54990819)
chr3 (163-201)||(2597217-2597255)
chr3 (135-204)||(11612337-11612407)
chr3 (162-208)||(27259195-27259241)
chr3 (163-204)||(30311344-30311385)
chr3 (135-208)||(30715776-30715849)
chr3 (154-206)||(37788452-37788505)
chr3 (168-200)||(9557362-9557394)
chr3 (142-201)||(14186688-14186748)
chr3 (164-208)||(25035739-25035783)
chr3 (121-204)||(32638983-32639067)
chr3 (163-203)||(33899653-33899693)
chr3 (163-203)||(38550401-38550441)
chr3 (126-201)||(44069799-44069875)
chr3 (162-206)||(53412981-53413025)
[»] chr6 (21 HSPs)
chr6 (135-208)||(33549138-33549212)
chr6 (116-203)||(18562587-18562675)
chr6 (135-208)||(6385896-6385970)
chr6 (136-204)||(24641159-24641228)
chr6 (162-202)||(19162823-19162863)
chr6 (121-208)||(20213075-20213163)
chr6 (121-208)||(22107098-22107186)
chr6 (135-208)||(12234475-12234549)
chr6 (121-190)||(18263892-18263962)
chr6 (162-206)||(4105087-4105131)
chr6 (121-208)||(21418504-21418592)
chr6 (121-208)||(31622945-31623033)
chr6 (136-197)||(13441102-13441164)
chr6 (162-208)||(14278107-14278153)
chr6 (126-208)||(14557996-14558078)
chr6 (135-204)||(30127438-30127508)
chr6 (162-203)||(12633048-12633089)
chr6 (163-208)||(23910108-23910153)
chr6 (121-200)||(9875245-9875325)
chr6 (164-204)||(14446233-14446273)
chr6 (164-208)||(16405119-16405163)
[»] chr7 (39 HSPs)
chr7 (121-208)||(2446342-2446430)
chr7 (135-204)||(48771976-48772046)
chr7 (126-202)||(7309396-7309472)
chr7 (121-201)||(41519219-41519299)
chr7 (126-208)||(25132338-25132420)
chr7 (132-200)||(11700207-11700275)
chr7 (121-208)||(11720914-11721002)
chr7 (121-208)||(43590941-43591029)
chr7 (121-207)||(30579370-30579457)
chr7 (129-203)||(37117116-37117191)
chr7 (162-208)||(26459406-26459452)
chr7 (135-203)||(279922-279991)
chr7 (132-204)||(5934159-5934232)
chr7 (167-208)||(11765036-11765077)
chr7 (121-201)||(15137594-15137675)
chr7 (121-197)||(21558173-21558250)
chr7 (136-208)||(21877842-21877915)
chr7 (135-208)||(22932680-22932753)
chr7 (121-201)||(37473655-37473736)
chr7 (135-203)||(42711997-42712066)
chr7 (162-206)||(2962495-2962539)
chr7 (121-204)||(9183145-9183229)
chr7 (164-208)||(15905672-15905715)
chr7 (121-204)||(17040966-17041050)
chr7 (164-208)||(20335829-20335873)
chr7 (164-208)||(22760897-22760941)
chr7 (121-208)||(45228979-45229067)
chr7 (165-203)||(8108620-8108658)
chr7 (162-204)||(9608625-9608667)
chr7 (162-204)||(9836197-9836239)
chr7 (162-208)||(23552152-23552198)
chr7 (135-208)||(33181178-33181252)
chr7 (162-208)||(43215218-43215264)
chr7 (135-200)||(45709676-45709742)
chr7 (163-208)||(23301599-23301644)
chr7 (144-200)||(49050468-49050525)
chr7 (121-204)||(25590649-25590733)
chr7 (164-208)||(26199543-26199587)
chr7 (121-180)||(41487421-41487481)
[»] chr2 (32 HSPs)
chr2 (121-208)||(33582007-33582095)
chr2 (135-208)||(39715026-39715100)
chr2 (135-208)||(42327363-42327437)
chr2 (141-208)||(21213803-21213871)
chr2 (121-208)||(29197330-29197418)
chr2 (135-201)||(3001420-3001487)
chr2 (126-208)||(7798995-7799077)
chr2 (121-208)||(29503305-29503392)
chr2 (136-204)||(25637189-25637258)
chr2 (136-204)||(33962753-33962822)
chr2 (121-208)||(23052477-23052565)
chr2 (161-208)||(3661003-3661050)
chr2 (132-208)||(19244143-19244220)
chr2 (164-200)||(21939121-21939157)
chr2 (164-208)||(24191872-24191916)
chr2 (121-200)||(31573595-31573675)
chr2 (121-208)||(37480109-37480197)
chr2 (162-206)||(40416386-40416430)
chr2 (121-208)||(42602588-42602676)
chr2 (137-208)||(4262273-4262344)
chr2 (165-208)||(7667468-7667511)
chr2 (135-208)||(12086097-12086171)
chr2 (166-208)||(12994376-12994418)
chr2 (135-180)||(37971957-37972003)
chr2 (135-203)||(21195644-21195713)
chr2 (167-208)||(28846725-28846766)
chr2 (166-207)||(42860383-42860424)
chr2 (162-206)||(4060210-4060254)
chr2 (121-180)||(9318029-9318089)
chr2 (129-180)||(12632780-12632832)
chr2 (162-198)||(13519048-13519084)
chr2 (137-208)||(26482127-26482198)
[»] chr4 (35 HSPs)
chr4 (126-200)||(49262643-49262718)
chr4 (121-208)||(7949408-7949496)
chr4 (121-204)||(28635734-28635818)
chr4 (121-208)||(24234679-24234766)
chr4 (135-204)||(39509108-39509178)
chr4 (121-208)||(23377990-23378078)
chr4 (121-208)||(37274413-37274501)
chr4 (135-201)||(19531970-19532037)
chr4 (129-204)||(43728433-43728508)
chr4 (135-208)||(13015461-13015535)
chr4 (162-208)||(37109347-37109393)
chr4 (126-207)||(46545746-46545828)
chr4 (135-208)||(55427168-55427242)
chr4 (126-207)||(19112943-19113024)
chr4 (121-201)||(30938173-30938254)
chr4 (121-200)||(4185135-4185215)
chr4 (121-208)||(8030158-8030246)
chr4 (135-202)||(43623412-43623480)
chr4 (121-200)||(47386745-47386825)
chr4 (121-200)||(52254358-52254438)
chr4 (126-208)||(4688597-4688680)
chr4 (126-208)||(37720173-37720256)
chr4 (126-208)||(46329198-46329281)
chr4 (162-208)||(2622391-2622437)
chr4 (135-208)||(19238545-19238619)
chr4 (162-208)||(49576890-49576936)
chr4 (135-204)||(51250490-51250560)
chr4 (162-207)||(5119004-5119049)
chr4 (154-206)||(7292785-7292838)
chr4 (121-173)||(29312218-29312271)
chr4 (136-195)||(32662801-32662861)
chr4 (126-201)||(38838838-38838914)
chr4 (118-201)||(46295138-46295222)
chr4 (135-206)||(51622521-51622593)
chr4 (121-208)||(51954148-51954236)
[»] scaffold0299 (1 HSPs)
scaffold0299 (162-204)||(11566-11608)
[»] scaffold0044 (1 HSPs)
scaffold0044 (135-204)||(92985-93055)
[»] scaffold0032 (1 HSPs)
scaffold0032 (135-204)||(112320-112390)
[»] scaffold0194 (1 HSPs)
scaffold0194 (162-204)||(13042-13084)
[»] scaffold0074 (1 HSPs)
scaffold0074 (162-208)||(45755-45801)
[»] scaffold0009 (1 HSPs)
scaffold0009 (135-208)||(145882-145955)
[»] scaffold0291 (1 HSPs)
scaffold0291 (164-204)||(2468-2508)
[»] scaffold0180 (1 HSPs)
scaffold0180 (162-206)||(19958-20002)


Alignment Details
Target: chr5 (Bit Score: 132; Significance: 9e-69; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18169668 - 18169843
Alignment:
Q  1 catcacagctcttggtttctgtgtatactgcaccaaaaggaccatcaatgttatgccaaatgatcaatcatactatttggattaacag--acacacattt 98  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  18169668 catcccagctcatggtttctgtgtatactgcaccaaaaggaccatcaatgttatgccaaatgatcaatcatactatttggattaacagacacacacattt 18169767  T
Q  99 acacattgtaaactatcctttgttttcttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacct 176  Q
    ||||||||||||| ||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  18169768 acacattgtaaacaat--ttttttttcttgaagaagctaaattagcccacctaatttggcactgagagaatcgaacct 18169843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 16773929 - 16773841
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  16773929 tttttttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcc 16773841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 30109263 - 30109349
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    |||| ||||| || |||||||||||||||||| || |||| | | ||||||||||||||| ||||||||||||||||||||||||||    
T  30109263 tttttttgaagaagctaaattagcccacctaaattagcaccgggggaatcgaacctgagacctcaaggaggagcacactcccaggtc 30109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 22020816 - 22020900
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| ||||||||||||||||||||| ||  ||||| ||||||||||| ||||||  ||||||||||||||||||||||    
T  22020816 tttttttgaagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccag 22020900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 29075903 - 29075819
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || ||||||||||||| |||| |||||||  ||||||||||||| ||||||||| |||||||||||||||||||    
T  29075903 tttttttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccag 29075819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 8278229 - 8278317
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||||| | ||||| | ||| |||| ||| ||||||||| |||||||||||||||||| ||||    
T  8278229 tttttttgaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcc 8278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 43442318 - 43442234
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| |||||||||||||||| | || ||| || | ||||||||||||||||||| ||  |||||||||||||||||||    
T  43442318 tttttttgaagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccag 43442234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 17028232 - 17028306
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||| ||| |||| ||| ||||| ||||||||| ||  |||||||||||||||||| ||||    
T  17028232 ctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcc 17028306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 12883962 - 12883878
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| |||||||| |||||||| |||||| || |||  | || ||||||| |||| ||||| |||||||||||||||||||||||    
T  12883962 tttttttgaaaaagctaaattaacccaccaaaattgatattggagagaattgaacatgagacctcaaggaggagcacactcccag 12883878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 14285241 - 14285197
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||    
T  14285241 gagagaatcgaacctgagaccttgaggaggagcacactcccaggt 14285197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 21589410 - 21589322
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||| |||||||||||| |||||||  ||| |||||||||||||||  || ||||| |||| ||||||||||||    
T  21589410 tttttttgaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcc 21589322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 17761314 - 17761393
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||| |||||||| |||| |||| ||||||| || ||||||||| ||| | |  ||||||||||||||||||||||    
T  17761314 ttgaaaaagctaaattaacccatctaaattggcaccgaagagaatcgatcctaaaacttcaaggaggagcacactcccag 17761393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 29173598 - 29173531
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||||||||||||||||| ||| |||  |||| |||||||||||| | ||| ||||||||||||||||    
T  29173598 ctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 14495773 - 14495843
Alignment:
Q  135 ctaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||| ||||||| |||| |||||| | ||||||||| || |||||| ||| |||||||||||||||||||    
T  14495773 ctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccag 14495843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 18206614 - 18206684
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||| || |||||||| |||||| ||||| |||  | || ||||||||||||||||||||    
T  18206614 ctaaattagcccacccaaattggcactagagagagtcgaatctggaacctaaaggaggagcacactcccag 18206684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 27841015 - 27841057
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||||| |||||||| |||||||||||||| ||||    
T  27841015 gagagaatcgaaccggagatctcgaggaggagcacacttccag 27841057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 4793048 - 4793130
Alignment:
Q  135 ctaaattagcccacctaatttggcactgag-agaatcgaacctg--------agatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||| ||||||||| | |||||||||||||        ||| ||| |||||||||||||||||||||||    
T  4793048 ctaaattagcccacctaaattggcactggggagaatcgaacctgtcaacctgagacctcgaggaggagcacactcccaggtcc 4793130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 25627137 - 25627096
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||||||||||| ||  ||||||||||||||||||    
T  25627137 gagagaatcgaacctgagaccttgaggaggagcacactccca 25627096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 29981990 - 29982054
Alignment:
Q  119 tgttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatct 183  Q
    ||||||||| || || |||||||||||||| ||| |||||| || |||||||||||||||||||||    
T  29981990 tgttttctttaagaagctaaattagcccac-taaattggcattggagagaatcgaacctgagatct 29982054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 29692340 - 29692424
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| |||||||||||| ||||| || |||||| | ||||||||  |||||||||  |  |||||||||||||||||||    
T  29692340 tttttttgaagaaactaaattagtccacccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccag 29692424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 34984886 - 34984842
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||| ||| ||  |||||||||||||||||||||    
T  34984886 gagagaatcgaacctaagaccttgaggaggagcacactcccaggt 34984842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 15282 - 15365
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| || |||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  15282 ttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcc 15365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 968470 - 968396
Alignment:
Q  135 ctaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  968470 ctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcc 968396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 16852462 - 16852374
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||| |||||||||||| |||||||| || |||||||||||||||| ||| |||||||||||||||||||||||    
T  16852462 tttttttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcc 16852374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 29858003 - 29858091
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgagag-aatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| |||||||| |||||||||||||||||| ||||||| ||| | |||||||||||||| ||| ||||||||||||||||| |||||    
T  29858003 tttttttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcc 29858091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 3624701 - 3624614
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| |||||||| |||||||||||||||||| ||| | | ||||||||||||||||||| ||  | |||||||||||||||||||||    
T  3624701 tttttttgaaaaagctaaattagcccacctaaattgacccggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcc 3624614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 8485121 - 8485033
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||||| ||||||| | |||||||||||  ||||| ||||| ||||||||||||| |||||||    
T  8485121 tttttttgaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcc 8485033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 28783182 - 28783095
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    |||| ||||| || ||||||||||||||| || ||||||| ||| |||||||||| ||||| ||  ||||||||||||||||||||||    
T  28783182 tttttttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtc 28783095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 11819898 - 11819810
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| |||| ||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  11819898 tttttttgaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcc 11819810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 6536628 - 6536554
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||| ||||||||| |||||||  |||||||| |||||||||| ||  |||||||||||||||| ||||||    
T  6536628 ctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcc 6536554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 11492041 - 11492111
Alignment:
Q  135 ctaaattagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||| || ||| |||||| ||||||||||||| ||| ||| || ||||||||||||||||    
T  11492041 ctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccag 11492111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 19703456 - 19703529
Alignment:
Q  136 taaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||| | ||| |||| | ||||||||||||||||| ||  ||||||||||||||| |||||||    
T  19703456 taaattagcccaccttaattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcc 19703529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 23361617 - 23361686
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||||||||||||||||| ||| |||  |||||||| |||||||||| ||  ||||||||||||||||||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactccca 23361686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 29431090 - 29431045
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcc 29431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 35641869 - 35641938
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||||| |||| ||||  ||| ||||||||||||||||||  || ||||||||||||||||||    
T  35641869 ctaaattagcccatctaaattggttctggagagaatcgaacctgagacatcgaggaggagcacactccca 35641938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 2203614 - 2203526
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||||||| | | ||||| || ||||||| ||  |||||||||||||||||||||||    
T  2203614 tttttttgaataagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcc 2203526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 7140815 - 7140747
Alignment:
Q  136 taaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||||| || |||  || |||||||||||| |||||| ||| ||||||||||||| |||||    
T  7140815 taaattagcccacccaaattgataccgagagaatcgaatctgagagctcgaggaggagcacacacccag 7140747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 44780068 - 44780156
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| |||| ||| ||||| ||||||||| ||  |||||||||||||||||| ||||    
T  44780068 tttttttgaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcc 44780156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 3826774 - 3826811
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactc 3826811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 11928730 - 11928771
Alignment:
Q  165 agaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  11928730 agaatcgaacctgagacctcgaggaggagcacacttccaggt 11928771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 16843790 - 16843831
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||||||||||||||   |||||||||||||||||    
T  16843790 gagagaatcgaacctgagatcttgcggaggagcacactccca 16843831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 40791849 - 40791926
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcaca 197  Q
    |||| ||||| || |||||||||||||| ||| ||| |||| |||| |||||||||| |||  |||||||||||||||    
T  40791849 tttttttgaagaagctaaattagcccacttaaattgacactagagaaaatcgaacctaagacttcaaggaggagcaca 40791926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 7347959 - 7347887
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcac-tgagagaatcgaacctgagatctcaaggagga 192  Q
    |||| ||||| || |||||||||||||||||| ||| |||  |||||||| |||||||| | |||||||||||    
T  7347959 tttttttgaagaagctaaattagcccacctaaattgacacaagagagaattgaacctgaaacctcaaggagga 7347887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 33017294 - 33017250
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||||    
T  33017294 gagagaatcgaacctgagaccttgaggaggagcacacttccaggt 33017250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 8e-20; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 50901689 - 50901616
Alignment:
Q  135 ctaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||| ||| |||||||||||||| ||||||||    
T  50901689 ctaaattagcccacctaaattggcactgagagaatcgaatttgagacctcgaggaggagcacactaccaggtcc 50901616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 31383771 - 31383840
Alignment:
Q  140 ttagcccacctaatttggcac-tgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||| || ||||||| | |||||||||||||||||| | |||||||||||||||||||||||||    
T  31383771 ttagcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactcccaggtcc 31383840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 12587391 - 12587312
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||| ||||| || |||||||||||||||||| |||   | ||||||||||||||||||| ||| |||||||||||||||    
T  12587391 tttttttgaagaagctaaattagcccacctaaattgcaccggagagaatcgaacctgagacctcgaggaggagcacactc 12587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 44126503 - 44126429
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||| |||||| |||||||| ||||||||| || |||||| |||  ||||||||||||||||||||||    
T  44126503 ctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcc 44126429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 40814370 - 40814443
Alignment:
Q  129 aaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    ||||| |||||||||||||| ||| ||| |||| ||||||||||||||||| | |||||||| |||||||||||    
T  40814370 aaaaagctaaattagcccacttaaattgacactagagagaatcgaacctgaaacctcaaggatgagcacactcc 40814443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 6122916 - 6122828
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| |||| ||| ||||||||||||||| ||  |||||||||||||||||| ||||    
T  6122916 tttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcc 6122828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 18037567 - 18037655
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||||| | ||||| | |||||||||||| ||||||||| |  ||||||||||||||| ||||    
T  18037567 ttttgttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaaaaggagcacactcccaagtcc 18037655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 52336728 - 52336812
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| ||| |||||||||||| | || ||| |||  |||| ||||||||||||||||| ||||||||||||||||||||    
T  52336728 tttttttgaagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccag 52336812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 3800014 - 3799951
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcaca 197  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| |  || ||||||||||||    
T  3800014 ctaaattagcccacctaaattggcactagagagaatcgaacctgaaacttcgaggaggagcaca 3799951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 27476739 - 27476806
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||||||||||||||||| | |||||  ||||||||| ||| ||||||||| ||||||||||||||||    
T  27476739 ctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcc 27476806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 42983342 - 42983412
Alignment:
Q  135 ctaaattagcccacctaatttggcac-tgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||| |||| ||| ||||||| ||||||||||||||||  || ||||||||||| |||||||||||    
T  42983342 ctaaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccag 42983412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 51814602 - 51814536
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    ||||||||||||||| || ||||||| | |||||||||||||||||| ||  |||||||||||||||    
T  51814602 ctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactc 51814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 21547449 - 21547522
Alignment:
Q  136 taaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| |||||||||||| |||||| | ||||||||||||||||| | ||| ||||||||||| |||||| ||||    
T  21547449 taaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcc 21547522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 17440035 - 17439955
Alignment:
Q  126 ttgaaaaaactaaattagccca-cctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||| ||||||||| ||| ||||| ||| ||||| |||||||| ||| ||||| ||| |||||||||||||||||||    
T  17440035 ttgaaaaacctaaattagtccaacctaaattgacactggagagaatcaaacatgagacctcgaggaggagcacactcccag 17439955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 24047071 - 24047139
Alignment:
Q  136 taaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||||||||| |||||| ||||||||| | |||||||||| ||| | ||| ||||||||||||||||||    
T  24047071 taaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactccca 24047139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 36124955 - 36124867
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgaga-gaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||||| ||||| ||  || | ||| ||| ||||| ||||||||||||||||||| |||||||    
T  36124955 tttttttgaagaagctaaattagcccacctaaattggcgctaggaaggatcaaacttgagacctcaaggaggagcacactctcaggtcc 36124867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 1094632 - 1094561
Alignment:
Q  136 taaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||| ||||||| | |||||||||||  ||||| |||  |||||||||||||| |||||    
T  1094632 taaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggt 1094561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 2220094 - 2220015
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacact 199  Q
    |||| ||||| ||||||||||||||||  ||| ||| || || |||||||||||||||||| ||| ||||| ||||||||    
T  2220094 tttttttgaagaaactaaattagcccatttaaattgacattggagagaatcgaacctgagacctcgaggagaagcacact 2220015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 9117196 - 9117157
Alignment:
Q  165 agaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  9117196 agaatcgaacctgagacctcaaggaggagcacacttccag 9117157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 2799942 - 2799900
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  2799942 gagagaatcgaacctgagaccttgaggaggagcacactcccag 2799900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 12370243 - 12370197
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||| ||| ||||| ||| |||||||||||||||||||||||    
T  12370243 gagagaatcaaacatgagacctcgaggaggagcacactcccaggtcc 12370197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 26232357 - 26232395
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  26232357 gagagaattgaacctgagacctcaaggaggagcacactc 26232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 33700769 - 33700811
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  33700769 gagagaatcgaacctgagaccttgaggaggagcacactcccag 33700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 44961873 - 44961807
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    ||||||||||||||| || ||| |||| ||||||||||||||||||| |   |||||||||||||||    
T  44961873 ctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 52116749 - 52116823
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||| | |||||||| | |||||| ||||||||||  |  |||||||||||||||||| ||||    
T  52116749 ctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcc 52116823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 3266004 - 3265963
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||||||||||| ||  ||||||||||||||||||    
T  3266004 gagagaatcgaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 13578690 - 13578751
Alignment:
Q  140 ttagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||||||| |||| ||||||| || ||||||||||||| |||| | ||||||||||||||||    
T  13578690 ttagcccatctaaattggcaccgaagagaatcgaacctcagattttaaggaggagcacactc 13578751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 15786317 - 15786358
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccag 15786358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 1247193 - 1247149
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||| ||  |||||||| ||||||||||||    
T  1247193 gagagaatcgaacctgagaccttgaggaggagtacactcccaggt 1247149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 4566628 - 4566584
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||| |   |||||||||||||||||||||    
T  4566628 gagagaatcgaacctgagaccctgaggaggagcacactcccaggt 4566584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 12662389 - 12662325
Alignment:
Q  136 taaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacact 199  Q
    |||||||| |||||||| |||||| | |||| ||||||||||||||  || ||||||||||||||    
T  12662389 taaattagtccacctaaattggcattagagataatcgaacctgagacatcgaggaggagcacact 12662325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 17410309 - 17410269
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||| ||||||||| ||||||| |||||||||||    
T  17410309 gagaatcgaacttgagatctcgaggaggaccacactcccag 17410269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 19940847 - 19940907
Alignment:
Q  142 agcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    ||||||| ||| ||||||| | |||||||| ||||||||| || |||||||||||||||||    
T  19940847 agcccacataaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactcc 19940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 30689090 - 30689046
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||| |||| ||||| |||||||||||||| ||||||||||||    
T  30689090 gagaattgaacatgagacctcaaggaggagcaaactcccaggtcc 30689046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 36371550 - 36371506
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||| ||| ||  |||||||||||||||||||||    
T  36371550 gagagaatcgaacctcagaccttgaggaggagcacactcccaggt 36371506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 52769937 - 52770021
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || |||||||||||||||||| ||| |||| | ||||||||||||||||| |||||||||||||||||||||||    
T  52769937 tttttttgaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccag 52770021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 10445093 - 10445181
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||  || || ||||  ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  10445093 tttttttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcc 10445181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 44743823 - 44743893
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||| |||||| || ||||||||| ||| |||||||||||||| ||| |||||||||||||||||||    
T  44743823 ctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccag 44743893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 5166543 - 5166463
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    ||||| || ||||||||||| |||||| ||||||| | ||||||||||||||||||||  ||||| |||||||||| |||||    
T  5166543 ttgaagaagctaaattagccaacctaacttggcaccg-gagaatcgaacctgagatcttgaggagcagcacactccaaggtc 5166463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 32651407 - 32651480
Alignment:
Q  136 taaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||||| |||| ||| |||| |||||||||||| |||||||||  |||||||||||||||||||||||    
T  32651407 taaactagcccatctaaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcc 32651480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 2667984 - 2667900
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || ||||| |||||||||||| ||| |||| |||| |||||||||||||| ||| |||| ||||||||||||||    
T  2667984 tttttttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccag 2667900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 10499063 - 10499147
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || ||||||||||||||| || ||| || | ||||||||||||||||||| |||||||| ||||| ||||||||    
T  10499063 tttttttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccag 10499147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 12761614 - 12761546
Alignment:
Q  141 tagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||| ||||||| | | | |||||||||||||| ||||||||||| |||||||||||||||    
T  12761614 tagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcc 12761546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 20501817 - 20501730
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||  | |||| ||||||| |||||||||||||||||| || |||||||||||||||| |||||||    
T  20501817 tttttttgaagaagctaaattagcccctcaaatt-ggcactggagagaatcgaacctgagaccttaaggaggagcacactctcaggtcc 20501730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 14339732 - 14339649
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||| ||||| || |||||||||||||||| | |||||||| | |||||||||||||||||  |  ||||||||||||||||||    
T  14339732 tttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactccca 14339649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 31520564 - 31520643
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||| ||||||||||||||  || ||| ||||| |||||||| ||||| ||| ||| |||||||||||||||||||    
T  31520564 ttgaaaaagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccag 31520643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 4844479 - 4844549
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||  || ||||||| | |||||||||| ||||||| ||| |||||||||||||||||||    
T  4844479 ctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccag 4844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 4870175 - 4870245
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||  || ||||||| | |||||||||| ||||||| ||| |||||||||||||||||||    
T  4870175 ctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccag 4870245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 36720482 - 36720420
Alignment:
Q  142 agcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||| ||| |||| ||||||||||||||||| | ||| ||||||||||||||||||    
T  36720482 agcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactccca 36720420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 47454571 - 47454652
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||| ||||| || ||||| || ||||||||| |||||| || | |||||||||||||||| ||| ||||||||||||||||    
T  47454571 tttttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactcc 47454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 8075081 - 8075169
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| |||| ||| ||||||||||||| | ||  |||||||||||||||||| ||||    
T  8075081 tttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcc 8075169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 51903832 - 51903916
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || ||||||||||||||  || ||| ||| | |||||||||||||||||| | | |||||||||||||||||||    
T  51903832 tttttttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccag 51903916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 17765203 - 17765164
Alignment:
Q  166 gaatcgaacctgagatctcaaggaggagcacactcccagg 205  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  17765203 gaatcgaacctgagatcttgaggaggagcacactcccagg 17765164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 19066523 - 19066484
Alignment:
Q  166 gaatcgaacctgagatctcaaggaggagcacactcccagg 205  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  19066523 gaatcgaacctgagatcttgaggaggagcacactcccagg 19066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 21960632 - 21960585
Alignment:
Q  161 tgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  21960632 tgagagaatcgaatctgagacctcgaggaggagcacactctcaggtcc 21960585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 30510162 - 30510241
Alignment:
Q  130 aaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| |||||||||||||| ||  ||| |||| ||||||||||||||||||| ||| || ||||||| ||||| ||||||    
T  30510162 aaaagctaaattagcccacttagattgacactagagagaatcgaacctgagacctcgagaaggagcatactcctaggtcc 30510241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 54990819 - 54990736
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| || |||||||||||||||||| ||| ||  ||| |||||||||||||||| ||  ||||||||||| |||| ||||||    
T  54990819 ttgaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcacgctccaaggtcc 54990736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 2597217 - 2597255
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  2597217 agagattcgaacctgagacctcaaggaggagcacactcc 2597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 11612407 - 11612337
Alignment:
Q  135 ctaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||| | |||||| ||||||| | | || ||||||||||||| || ||||||||||||||||||||    
T  11612407 ctaaattagtcgacctaaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccag 11612337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 27259241 - 27259195
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||||||    
T  27259241 gagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcc 27259195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 30311385 - 30311344
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccag 30311344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 30715849 - 30715776
Alignment:
Q  135 ctaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| ||||||| | || ||||||| ||||||||||||||||| |  |  |||||||||||||||||| ||||    
T  30715849 ctaaactagcccatccaaattggcacggagagaatcgaacctgaaacattgaggaggagcacactcccaagtcc 30715776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 37788452 - 37788505
Alignment:
Q  154 ttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    |||||||| ||||||||||||||||||| ||  |||||||||||||||| ||||    
T  37788452 ttggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggt 37788505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 9557394 - 9557362
Alignment:
Q  168 atcgaacctgagatctcaaggaggagcacactc 200  Q
    ||||||||||||||||| |||||||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactc 9557362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 14186748 - 14186688
Alignment:
Q  142 agcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    ||||||||||| ||| ||| | |||||||||||||||||| ||  ||||||||||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 25035783 - 25035739
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||| ||||| |||||||||||| || |||||||    
T  25035783 gagaatcgaacctgaaatctcgaggaggagcacattctcaggtcc 25035739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 32639067 - 32638983
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||| |||| ||||||| |||| ||| ||| ||||| ||| |||||||||||||| ||| | || || |||||||||||    
T  32639067 ttttcttgaagaaacaaaattaggccacttaaattgacactggagaaaatcgaacctgagacctcgaagatgaacacactcccag 32638983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 33899693 - 33899653
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  33899693 agagaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 38550401 - 38550441
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||| |||||| ||| ||||||||||||||||||||||    
T  38550401 agagaattgaacctcagacctcaaggaggagcacactccca 38550441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 44069875 - 44069799
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    ||||| || ||||| |||||||||||| ||||||| | | |||||| ||||||||| ||  ||||||||||||||||    
T  44069875 ttgaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactcc 44069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 53413025 - 53412981
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||    
T  53413025 gagagaattgaacctgagaccttgaggaggagcacactcccaggt 53412981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 33549212 - 33549138
Alignment:
Q  135 ctaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||| ||||||| |||||| | ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  33549212 ctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcc 33549138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 18562587 - 18562675
Alignment:
Q  116 ctttgttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||| |||| ||||| || |||||||||||||||||| |||| ||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  18562587 ctttttttttttgaagaagctaaattagcccacctaaattggtacttgggagaatcaaacctgaaatctcaaggaggagcacactccca 18562675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 6385970 - 6385896
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||| || || |||| | |||||||||||||||||| || ||||||||||||| ||||||||||    
T  6385970 ctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcc 6385896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 24641159 - 24641228
Alignment:
Q  136 taaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||| |||||| |||| |||||||||||| | | ||| |||||||||||||||||||    
T  24641159 taaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccag 24641228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 19162863 - 19162823
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactccc 202  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  19162863 gagagaatcgaacctgagatctcgaggaggagcacactccc 19162823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 20213163 - 20213075
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| |||| ||| |||||||||||||||  |  |||||||||||||||||||||||    
T  20213163 tttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcc 20213075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 22107186 - 22107098
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| |||| ||| |||||||||||||||  |  |||||||||||||||||||||||    
T  22107186 tttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcc 22107098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 12234475 - 12234549
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||| |||| |||| ||| ||||| |||||||||||||||||| ||| ||  |||||||||||||||||||    
T  12234475 ctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcc 12234549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 18263962 - 18263892
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggag 190  Q
    |||| ||||| || |||||||||||||||||| |||||||| | |||||||||||||| || |||||||||    
T  18263962 tttttttgaagaagctaaattagcccacctaaattggcactggggagaatcgaacctgggacctcaaggag 18263892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 4105131 - 4105087
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||||    
T  4105131 gagaaaatcgaacctgagatcttaaggaggagcacactcctaggt 4105087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 21418592 - 21418504
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||| | |||||||| | ||||||||||| |||||  |  |||||||||||||||||| ||||    
T  21418592 tttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcc 21418504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 31622945 - 31623033
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| ||| | || || || ||||||||| ||| |||||||||||||||||||||||    
T  31622945 tttttttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcc 31623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 13441164 - 13441102
Alignment:
Q  136 taaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcaca 197  Q
    ||||||||||||| ||| ||||||||||| |||||||||| ||||| |||  |||||||||||    
T  13441164 taaattagcccacttaaattggcactgagaagaatcgaacttgagacctcgtggaggagcaca 13441102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 14278107 - 14278153
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||||    
T  14278107 gagagaatcaaacctgagaccttaaggaggagcgcactcccaggtcc 14278153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 14558078 - 14557996
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| || ||||||||| ||||| || ||| ||| | ||||||||||||||||| |   |||||||||||||| ||||||||    
T  14558078 ttgaagaagctaaattagaccacccaaattgacaccgggagaatcgaacctgagacccggaggaggagcacacttccaggtcc 14557996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 30127508 - 30127438
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||| || |||||| ||||||| | | |||||||||||||||| ||| | |||||||||||||||||    
T  30127508 ctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccag 30127438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 12633089 - 12633048
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||||| ||||||||| | ||||||||||||||||    
T  12633089 gagagaatcgaacatgagatctcgaagaggagcacactccca 12633048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 23910108 - 23910153
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| |||||||||||| ||  |||||||||||||||||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactcccaggtcc 23910153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 9875325 - 9875245
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||| |||||||||||||||||||| || ||| ||| || | ||||||  |||| |||||| ||||||||| |||||||||    
T  9875325 tttttttgaaaaaactaaattagcctacttaaattgacatcagagagagccgaatctgagacctcaaggagaagcacactc 9875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 14446273 - 14446233
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||||||||||| ||||| ||||||||| ||||    
T  14446273 gagaatcgaacctgagatctaaaggaagagcacacttccag 14446233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 16405163 - 16405119
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||| |||||| ||| ||||| |||||||||||||||||    
T  16405163 gagaatcgaaactgagacctcgaggagaagcacactcccaggtcc 16405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 2446430 - 2446342
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||||| | ||||| | |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  2446430 tttttttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcc 2446342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 48772046 - 48771976
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||||||||| |||| ||| | || |||||||||||||| |||||||||||||||||||||||    
T  48772046 ctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccag 48771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 7309472 - 7309396
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactccc 202  Q
    ||||| || |||||||||||||| ||| ||| ||| ||||||||||||| ||||| ||| |||||||||||||||||    
T  7309472 ttgaagaagctaaattagcccacttaaattgacacggagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 41519219 - 41519299
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||| ||||| || |||||||||||||||||| ||| ||| ||||||| ||||||||||| ||  ||||||||||||||||    
T  41519219 tttttttgaagaagctaaattagcccacctaaattgacacagagagaagcgaacctgagaccttgaggaggagcacactcc 41519299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 25132338 - 25132420
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| || ||||||||||||||| || || ||| || ||||||||||||||||| || ||| ||||||||||||| ||||||    
T  25132338 ttgaagaagctaaattagcccacccaaattagcattgggagaatcgaacctgagaccttaagaaggagcacactcctaggtcc 25132420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 11700275 - 11700207
Alignment:
Q  132 aaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||||||||||||||||  || ||||||| ||||||||||||||||||| ||  |||||||||| ||||    
T  11700275 aaactaaattagcccactcaaattggcacagagagaatcgaacctgagaccttgaggaggagcaaactc 11700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 11720914 - 11721002
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||||||||| | ||||||||| |||| | || ||||||||||||| ||||||||||    
T  11720914 tttttttgaagaagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcc 11721002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 43591029 - 43590941
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||| | |||||||| | |||||||||||||||||  |  |||||||||||||||||| ||||    
T  43591029 tttttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcc 43590941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 30579457 - 30579370
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    |||| ||||| || |||||||||||||||||| |||||| | |||| |||||||||||||| ||  |||||| | |||||||||||||    
T  30579457 tttttttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtc 30579370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 37117116 - 37117191
Alignment:
Q  129 aaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||||| |||||||| |||||||| ||||||| | ||||||||||||| || | |||||||||||| |||||||||    
T  37117116 aaaaaattaaattagtccacctaaattggcaccggagagaatcgaacccgaaacctcaaggaggagtacactccca 37117191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 26459406 - 26459452
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||    
T  26459406 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcc 26459452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 279922 - 279991
Alignment:
Q  135 ctaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||||||| || |||||| | |||||||| |||||||||| || ||||||||| |||||||||    
T  279922 ctaaattagcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacactccca 279991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 5934232 - 5934159
Alignment:
Q  132 aaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||||||| |||||||| ||| |||  ||| ||||||||| ||| | |||||||||||||||||||||||    
T  5934232 aaactaaattagtccacctaaattgacaccagagggaatcgaacatgaaacctcaaggaggagcacactcccag 5934159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 11765036 - 11765077
Alignment:
Q  167 aatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  11765036 aatcgaatctgagatctcaaggaggagcacactcccacgtcc 11765077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 15137675 - 15137594
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||| ||||| |||||||||||||||||| || ||| |||  ||||||||| ||||||||| ||  ||||||||||||||||    
T  15137675 tttttttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcc 15137594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 21558250 - 21558173
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcaca 197  Q
    |||| ||||| || |||||||| ||||||||| |||||||  ||||||||||||||||||| ||  ||||||||||||    
T  21558250 tttttttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 21877915 - 21877842
Alignment:
Q  136 taaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||  |||||||||| | | |||||||||| ||||| || |||||||||||| |||||||||||    
T  21877915 taaattagcccactcaatttggcaccgtggagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcc 21877842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 22932680 - 22932753
Alignment:
Q  135 ctaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||| ||||||| |||||| || ||||||||||||  |  | |||| |||||||||||||    
T  22932680 ctaaattagcccacctaaattggcaccgagagattcaaacctgagatcttgaataagagcgcactcccaggtcc 22932753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 37473736 - 37473655
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||| ||||| || |||||||| ||||||||| ||| || | | ||||||||||||||||| |||||||||||||| |||||    
T  37473736 tttttttgaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacctcaaggaggagcaaactcc 37473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 42712066 - 42711997
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||||||||||||||||| ||| |||| | ||||||||||| ||||| ||  ||||||||||||||||||    
T  42712066 ctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactccca 42711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 2962539 - 2962495
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||    
T  2962539 gagagaatcgaacctgagatcttgaggaggagcacactcacaggt 2962495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 9183145 - 9183229
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| |||||||||||||||||| || ||| |||  |||| ||||||||||||||  |  |||||||||||||||||||    
T  9183145 tttttttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactcccag 9183229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 15905672 - 15905715
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  15905672 gagaatcgaacctgagacct-aaggaggagcacactcccaggtcc 15905715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 17040966 - 17041050
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || |||||||  |||||| || |||||||| ||||||||||||||||||| ||  |||||||||||||| ||||    
T  17040966 tttttttgaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccag 17041050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 20335829 - 20335873
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcc 20335873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 22760941 - 22760897
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcc 22760897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 45228979 - 45229067
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||| ||| ||| ||||| |||||||||||||| | | |||||| || |||||||||| ||||||    
T  45228979 tttttttgaagaagctaaattagcccacttaaattgacactggagagaatcgaacctaaaacctcaagaagaagcacactcctaggtcc 45229067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 8108658 - 8108620
Alignment:
Q  165 agaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  8108658 agaatcgaacctgagacctcaaggaggagcgcactccca 8108620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 9608625 - 9608667
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||||||||  |||||||| ||||||||||    
T  9608625 gagagaatcgaacctgagatcttgaggaggaggacactcccag 9608667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 9836197 - 9836239
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||||||||  |||||||| ||||||||||    
T  9836197 gagagaatcgaacctgagatcttgaggaggaggacactcccag 9836239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 23552198 - 23552152
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||| ||||| ||  |||||||||||||||||||||||    
T  23552198 gagagaatcgaacttgagaccttgaggaggagcacactcccaggtcc 23552152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 33181178 - 33181252
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||| || ||| |||| ||| ||||||||||||||||||  ||  |||||||||||||| ||||    
T  33181178 ctaaattagcccacccaaattgacactagagggaatcgaacctgagatcttgagttggagcacactcccaagtcc 33181252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 43215264 - 43215218
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||||| ||  |||||||||||||||| ||||||    
T  43215264 gagagaatcgaacctgagaccttgaggaggagcacactccgaggtcc 43215218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 45709676 - 45709742
Alignment:
Q  135 ctaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||| ||||||||||||| |||| | | |||| |||||||||||||| ||| |||||||||||||||    
T  45709676 ctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactc 45709742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 23301599 - 23301644
Alignment:
Q  163 agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||| ||| ||||| |||||||||||||||||||||| ||||    
T  23301599 agagaatcaaacttgagacctcaaggaggagcacactcccaagtcc 23301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 49050468 - 49050525
Alignment:
Q  144 cccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactc 200  Q
    ||||||||| ||||||| | | |||||||||||||||| |||||||||||| ||||||    
T  49050468 cccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggagtacactc 49050525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 25590733 - 25590649
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || ||||||||||||||  || ||| ||| || || ||||||||| |||| ||| |||||||||||||||||||    
T  25590733 tttttttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccag 25590649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 26199587 - 26199543
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||||||||| |||||| ||| || |||||||    
T  26199587 gagaatcgaacctgagatctcaaagaggagtacattctcaggtcc 26199543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 41487481 - 41487421
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgaga 180  Q
    |||| ||||| || |||||||||||||||||| ||||||| | | ||||||||||||||||    
T  41487481 tttttttgaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgaga 41487421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 33582095 - 33582007
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||| |||||||| ||| || | ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  33582095 tttttttgaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactctcaggtcc 33582007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 39715100 - 39715026
Alignment:
Q  135 ctaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||| ||||  ||| | |||||||||||||||| ||| |||||||||||||||||||||||    
T  39715100 ctaaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcc 39715026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 42327363 - 42327437
Alignment:
Q  135 ctaaattagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||| || ||||||| || ||||||||||||||||| ||  |||||||||||||||||||||||    
T  42327363 ctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcc 42327437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 21213871 - 21213803
Alignment:
Q  141 tagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||| ||||||| | | |||||||||||||||| ||||||||||| |||||||||||||||    
T  21213871 tagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcc 21213803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 29197330 - 29197418
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgaga-gaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||||||  ||||||||||||||||| ||||||| | || ||||||||| |||||  ||||||||||||||||||||| ||||    
T  29197330 tttttttgaaaaagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcc 29197418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 3001487 - 3001420
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||||||||||||| |||  ||||||  |||| |||||||||||||||||||||||||||||||||||    
T  3001487 ctaaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcc 3001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 7798995 - 7799077
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| || ||||||||||| || ||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||| ||||    
T  7798995 ttgaagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcc 7799077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 29503392 - 29503305
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||| |||||| ||| ||| ||| | ||||||||||||||||| ||  |||||||||||||||||||||||    
T  29503392 tttttttgaagaagctaaatttgcccacttaaattgacaccgggagaatcgaacctgagaccttgaggaggagcacactcccaggtcc 29503305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 25637258 - 25637189
Alignment:
Q  136 taaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||| |||||| | ||||||| ||||||||||| ||| || ||||||||||||||||    
T  25637258 taaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccag 25637189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 33962753 - 33962822
Alignment:
Q  136 taaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||| |||||||| |||||||| || ||||||||| | |||||||| |||||||||||||||||||    
T  33962753 taaattagtccacctaaattggcactaaggagaatcgaatccgagatctcgaggaggagcacactcccag 33962822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 23052477 - 23052565
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| |||||||||||||||||| ||  ||||||| | ||||||||||||||||| ||  ||||| |||||||||||| ||||    
T  23052477 tttttttgaagaaactaaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcc 23052565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 3661003 - 3661050
Alignment:
Q  161 tgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||    
T  3661003 tgagagaatcgaacctgagatctcgaggaggggcacactctcaggtcc 3661050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 19244220 - 19244143
Alignment:
Q  132 aaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||  || |||||||  ||||||||||||||||||| ||   |||||||||||||| |||||||    
T  19244220 aaactaaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcc 19244143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 21939121 - 21939157
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  21939121 gagaatcgaacctgagatctcgaggaggagcacactc 21939157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 24191916 - 24191872
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||    
T  24191916 gagaatcgatcatgagatctcaaggaggagcacactctcaggtcc 24191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 31573595 - 31573675
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||||||||| ||  |||||||| |||||||| ||| ||  || |||||||||||||||||  ||||||||||||||||||    
T  31573595 ttttcttgaagaagttaaattagtccacctaaattgacatcgaagagaatcgaacctgagacatcaaggaggagcacactc 31573675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 37480197 - 37480109
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || |||| || | | |||||||||||||||| ||  ||||||||||||||| |||||||    
T  37480197 tttttttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcc 37480109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 40416386 - 40416430
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  40416386 gagagaatcgaacctgagaccttaaggaggagcatactcccaggt 40416430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 42602676 - 42602588
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||||||| | |||||||| ||||| ||| ||  || ||||||||||||||||||||    
T  42602676 tttttttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcc 42602588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 4262273 - 4262344
Alignment:
Q  137 aaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||| || |||||| ||| | | ||||||||||||||||||| ||  |||||||||||||| ||||||||    
T  4262273 aaattaacctacctaaattgacccggagagaatcgaacctgagaccttgaggaggagcacactgccaggtcc 4262344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 7667468 - 7667511
Alignment:
Q  165 agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||| || ||||||||||||||||||||||||||| ||||    
T  7667468 agaatcgagccggagatctcaaggaggagcacactcccaagtcc 7667511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 12086097 - 12086171
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||| || |||| | || |||||||||| |||| ||  |||||||||||||| ||||||||    
T  12086097 ctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcc 12086171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 12994376 - 12994418
Alignment:
Q  166 gaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||| ||||| || ||||||||||||||||||||||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcc 12994418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 37972003 - 37971957
Alignment:
Q  135 ctaaattagcccacctaatttggca-ctgagagaatcgaacctgaga 180  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||    
T  37972003 ctaaattagcccacctaaattggcaccggagagaatcgaacctgaga 37971957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 21195644 - 21195713
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactccca 203  Q
    ||||||||||||| | || ||| |||| ||| ||||||||||||||| ||  ||||||||||||||||||    
T  21195644 ctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccca 21195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 28846766 - 28846725
Alignment:
Q  167 aatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||  || |||||||||||||||||||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcc 28846725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 42860424 - 42860383
Alignment:
Q  166 gaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtc 42860383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 4060210 - 4060254
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||||||  ||||| ||||||||| |||||    
T  4060210 gagagaatcgaacctgagatcttgaggagaagcacactctcaggt 4060254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 9318029 - 9318089
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgaga 180  Q
    |||| ||||| ||||||||||||||||||  | |||||| | |||||||||||||||||||    
T  9318029 tttttttgaagaaactaaattagcccacccgaattggcatcagagagaatcgaacctgaga 9318089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 12632832 - 12632780
Alignment:
Q  129 aaaaaactaaattagcccacctaatttggcactga-gagaatcgaacctgaga 180  Q
    |||||||||||||||||||||||| ||| ||| || |||||| ||||||||||    
T  12632832 aaaaaactaaattagcccacctaaattgacaccgatgagaattgaacctgaga 12632780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 13519048 - 13519084
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacac 198  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  13519048 gagagaatcgaacttgagacctcaaggaggagcacac 13519084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 26482198 - 26482127
Alignment:
Q  137 aaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||  || ||||||||||| |||||||||||||||| ||  || ||||||||||||| ||||||    
T  26482198 aaattagcccactgaaattggcactgaggagaatcgaacctgagaccttgag-aggagcacactcctaggtcc 26482127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 49262643 - 49262718
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    ||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||| |||||  ||||||||||||    
T  49262643 ttgaagaaactaaattagcccacctaaattggcactggggagaatcgaacctgagacctcaacaaggagcacactc 49262718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 7949408 - 7949496
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||||||| ||| |||  ||||||||||||||||||| ||  |||||||||||||||| ||||||    
T  7949408 tttttttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcc 7949496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 28635818 - 28635734
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||| ||||| || ||||||||||||||| || |||||||  ||||||||||||||| ||| ||| |||||||||||||||||||    
T  28635818 tttttttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccag 28635734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 24234766 - 24234679
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||| |||||||||| | ||||||||||||||| ||||| ||  |||| ||||||||||||| ||||    
T  24234766 tttttttgaataagctaaattagcctacctaatttgactctgagagaatcgaacttgagaccttcaggatgagcacactcccaagtcc 24234679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 39509178 - 39509108
Alignment:
Q  135 ctaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    |||||||| ||||||||| ||| ||||| | |||||||||||||||| ||| |||||||||||||||||||    
T  39509178 ctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccag 39509108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 23378078 - 23377990
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||| |||||| |  || |||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||    
T  23378078 tttttttgaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcc 23377990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 37274413 - 37274501
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || |||||||||||||| ||| || ||||  ||||||||||||||| ||| ||  |||||||||||||||||||||||    
T  37274413 tttttttgaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcc 37274501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 19531970 - 19532037
Alignment:
Q  135 ctaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||||||||||||||||| |||||| | ||||||||||||||||| | || |||||||||||| ||||    
T  19531970 ctaaattagcccacctaaattggcatcagagagaatcgaacctgaaaacttaaggaggagcacgctcc 19532037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 43728508 - 43728433
Alignment:
Q  129 aaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||| |||||||||||||||||| ||| |||||  ||||| ||||||||||  |  |||||||||||||||||||    
T  43728508 aaaaagctaaattagcccacctaagttgacactggaagaattgaacctgagactttgaggaggagcacactcccag 43728433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 13015535 - 13015461
Alignment:
Q  135 ctaaattagcccacctaatttggcac-tgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||| ||||||||| ||| ||| |||||||||||||| |||||  || |||||||||||||||||| ||||    
T  13015535 ctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcc 13015461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 37109347 - 37109393
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||    
T  37109347 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcc 37109393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 46545828 - 46545746
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    |||||||||||||||||| ||| |||| ||| || | |||| ||||||| |||||||||  ||||||||||||||| ||||||    
T  46545828 ttgaaaaaactaaattagtccatctaaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtc 46545746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 55427168 - 55427242
Alignment:
Q  135 ctaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||| || ||||||| | | |||||||||||||||| ||| || ||||||| ||||||||||||    
T  55427168 ctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcc 55427242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 19113024 - 19112943
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    ||||||||  |||||||| |||||||| |||| || | ||||||||||||||| | ||| | |||||||||||||| |||||    
T  19113024 ttgaaaaagataaattagtccacctaaattggtaccgggagaatcgaacctgataactcgaagaggagcacactcctaggtc 19112943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 30938173 - 30938254
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    |||| ||||| || ||||| || ||||||||| |||||| || | |||||||||||||||| ||| ||||||||||||||||    
T  30938173 tttttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactcc 30938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 4185215 - 4185135
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||| ||||| ||||||||||||||||||||| ||| |||| | ||||||||| | ||||| ||| ||||||| |||||||    
T  4185215 tttttttgaataaactaaattagcccacctaaattgacactagggagaatcgatcttgagacctcgaggaggatcacactc 4185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 8030158 - 8030246
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| |||| ||| ||||||||| ||||| ||  |||||||||||||||||| ||||    
T  8030158 tttttttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcc 8030246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 43623412 - 43623480
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactccc 202  Q
    ||||| |||||||||||| |||  |||  ||||||||||||||||||  ||||||||||||||||||||    
T  43623412 ctaaactagcccacctaaattgctactatagagaatcgaacctgagacttcaaggaggagcacactccc 43623480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 47386745 - 47386825
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||| ||||| || |||||||||||||||||| ||| |||| |||||||| |||||||||| |||||| || ||| |||||    
T  47386745 ttttgttgaagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacctcaagaagaagcgcactc 47386825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 52254358 - 52254438
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactc 200  Q
    |||| ||||| || ||||| |||||| ||||  ||||||||| |||||||| ||||||| | |||||||||||||||||||    
T  52254358 tttttttgaagaagctaaactagcccgcctacattggcactggagagaatctaacctgaaacctcaaggaggagcacactc 52254438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 4688680 - 4688597
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| ||||||||||| ||||||||| |||||||| | || |||| | ||||| | ||||||||||| |||| ||||||||||    
T  4688680 ttgaagaaactaaattaacccacctaaattggcactggggataatcaatcctgaaacctcaaggaggatcacattcccaggtcc 4688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 37720173 - 37720256
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttgg-cactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| || |||||||||||||||||| |||  | ||| |||||||||||||| || ||  |||||| ||||||||||||||||    
T  37720173 ttgaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcc 37720256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 46329281 - 46329198
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggcactgaga-gaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||| |||||||||||||  ||| || ||||||| | || ||||||||||||| | ||  |||||||||||||||||||||||    
T  46329281 ttgaagaaactaaattagcttacccaaattggcaccgggaagaatcgaacctgataccttgaggaggagcacactcccaggtcc 46329198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 2622391 - 2622437
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||||||||||||  |  |||||||||||||||||||||||    
T  2622391 gagagaatcgaacctgagacatggaggaggagcacactcccaggtcc 2622437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 19238545 - 19238619
Alignment:
Q  135 ctaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||| || |||| || | | ||||||||||| |||| ||| |||||||||||||||||| ||||    
T  19238545 ctaaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcc 19238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 49576890 - 49576936
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||||||||| ||  |||||||||||||||||| ||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtcc 49576936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 51250490 - 51250560
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||| || ||||||| | || ||||||||| ||||||||  ||| |||||||||||||||    
T  51250490 ctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccag 51250560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 5119004 - 5119049
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtc 207  Q
    |||||||| |||||| ||||||||||||| |||||||| |||||||    
T  5119004 gagagaattgaacctaagatctcaaggagcagcacacttccaggtc 5119049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 7292785 - 7292838
Alignment:
Q  154 ttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    |||||||| |||||||||||||||||||  |  |||||||||||||||||||||    
T  7292785 ttggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggt 7292838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 29312218 - 29312271
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaa 173  Q
    |||| |||||||| |||||||||||||||||| |||||| | ||||||||||||    
T  29312218 tttttttgaaaaagctaaattagcccacctaaattggcaccagagagaatcgaa 29312271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 32662861 - 32662801
Alignment:
Q  136 taaattagcccacctaatttggcactga-gagaatcgaacctgagatctcaaggaggagca 195  Q
    ||||||||||||| ||| ||| ||| || || |||||||||||||| ||||||||||||||    
T  32662861 taaattagcccacttaaattgacaccgaagaaaatcgaacctgagacctcaaggaggagca 32662801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 38838914 - 38838838
Alignment:
Q  126 ttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    ||||| |||||||||||||||||| || ||| || | ||||||||||||||| ||| ||  |||||||||| |||||    
T  38838914 ttgaagaaactaaattagcccaccgaaattgccatcggagagaatcgaacctaagaccttgaggaggagcatactcc 38838838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 46295222 - 46295138
Alignment:
Q  118 ttgttttcttgaaaaaactaaattagcccacctaatttggcactgag-agaatcgaacctgagatctcaaggaggagcacactcc 201  Q
    ||||| |||| || || ||||| ||||||||| || ||||||| | | |||||||||||||||| ||  ||||||||||||||||    
T  46295222 ttgttatctttaagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactcc 46295138  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 51622593 - 51622521
Alignment:
Q  135 ctaaattagcccacctaatttggcact-gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||| ||||||| || |||||||  |||||| |||||||||||| ||  |||||||||||||||| ||||    
T  51622593 ctaaattggcccacccaaattggcaccagagagagtcgaacctgagaccttgaggaggagcacactccaaggt 51622521  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 51954236 - 51954148
Alignment:
Q  121 ttttcttgaaaaaactaaattagcccacctaatttggca-ctgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||| ||||| || ||||||||||||||| || ||| || | |||| |||| ||||||||| ||| |||||||||| ||||||| ||||    
T  51954236 tttttttgaagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcc 51954148  T

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Target: scaffold0299 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 11608 - 11566
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  11608 gagagaatcgaacctgagacctcgaggaggagcacactcccag 11566  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 93055 - 92985
Alignment:
Q  135 ctaaattagcccacctaatttggcac-tgagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||| |||||||| |||| || ||| |||||||||||| ||| ||||||||||| |||||||||||    
T  93055 ctaaattagtccacctaaattggtacctgaaagaatcgaacctcagacctcaaggaggatcacactcccag 92985  T

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Target: scaffold0032 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 112390 - 112320
Alignment:
Q  135 ctaaattagcccacctaatttggcactg-agagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||| |||||||| ||||||| | |||||||||||||| ||| ||||| ||||| |||||||||||    
T  112390 ctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccag 112320  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 13042 - 13084
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccag 13084  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 45755 - 45801
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    ||||||||||||| ||||| ||||||||||| |||||||| ||||||    
T  45755 gagagaatcgaacatgagacctcaaggaggaacacactcctaggtcc 45801  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 145882 - 145955
Alignment:
Q  135 ctaaattagcccacctaatttggcactgagagaatcgaacctgagatctcaaggaggagcacactcccaggtcc 208  Q
    |||||||||| ||||||| ||||  ||| | |||||||| |||||| ||| || ||||||||||||| ||||||    
T  145882 ctaaattagctcacctaaattggtgctgggggaatcgaatctgagacctcgagaaggagcacactcctaggtcc 145955  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 2468 - 2508
Alignment:
Q  164 gagaatcgaacctgagatctcaaggaggagcacactcccag 204  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccag 2508  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 19958 - 20002
Alignment:
Q  162 gagagaatcgaacctgagatctcaaggaggagcacactcccaggt 206  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||    
T  19958 gagagaatcgaacctgagaccttgaggaggagcatactcccaggt 20002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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