View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21215_low_19 (Length: 323)

Name: NF21215_low_19
Description: NF21215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21215_low_19
NF21215_low_19
[»] chr3 (18 HSPs)
chr3 (103-297)||(28048065-28048259)
chr3 (166-304)||(27910427-27910565)
chr3 (175-304)||(28144522-28144651)
chr3 (103-297)||(27967900-27968094)
chr3 (108-297)||(27999229-27999421)
chr3 (103-291)||(28471596-28471784)
chr3 (103-291)||(28491637-28491825)
chr3 (126-252)||(28178711-28178840)
chr3 (103-252)||(28080088-28080240)
chr3 (103-291)||(28512642-28512830)
chr3 (173-264)||(11409457-11409548)
chr3 (173-285)||(19049988-19050100)
chr3 (103-275)||(27463626-27463798)
chr3 (173-285)||(17748668-17748780)
chr3 (180-264)||(28130616-28130700)
chr3 (13-58)||(17748535-17748580)
chr3 (13-58)||(19049855-19049900)
chr3 (13-59)||(27910633-27910679)
[»] chr4 (4 HSPs)
chr4 (103-285)||(9329344-9329529)
chr4 (103-285)||(9383127-9383312)
chr4 (13-51)||(9329279-9329317)
chr4 (13-51)||(9383062-9383100)
[»] chr7 (2 HSPs)
chr7 (134-295)||(8693983-8694144)
chr7 (13-54)||(8693858-8693899)
[»] scaffold0854 (1 HSPs)
scaffold0854 (116-159)||(3699-3742)


Alignment Details
Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 103 - 297
Target Start/End: Complemental strand, 28048259 - 28048065
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactcaattttttgtgcccatattttttaccacaacaata 202  Q
    ||||||||||||||||||| || ||||||| | ||||||||||||||||||||||||| ||||||     ||||||||||| ||||||||||||||||||    
T  28048259 ttaccattaagttgtcttgcggttgatcctcataaaccaatgggattttagtacttgtggtactcctcaatttgtgcccatcttttttaccacaacaata 28048160  T
Q  203 tatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatgacctcttaatgg 297  Q
    ||||||| |||||||||| ||||||||||| ||||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28048159 tatatcagtccatgaaaacatattgcatttaattgactctgattgtgcttgtggcttggaagtatctccagaaatggaagatgacctcttaatgg 28048065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 166 - 304
Target Start/End: Complemental strand, 27910565 - 27910427
Alignment:
Q  166 tcaattttttgtgcccatattttttaccacaacaatatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagt 265  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  27910565 tcaatttgttgtgcccatattttttaccacaacaatatatgtcagtccatgaaaacatattgcatttgattggctttgattgttcttctggcttggaagt 27910466  T
Q  266 atctccagaaatggaagatgacctcttaatgggtgaagt 304  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27910465 atctccagaaatggaagatgacctcttaatgggtgaagt 27910427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 28144651 - 28144522
Alignment:
Q  175 tgtgcccatattttttaccacaacaatatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccaga 274  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  28144651 tgtgcccatatattttaccacaacaatatatatcagtccatgaaaacatattgcatttgattggctctgattgttcttgtggcttggaagcatctccaga 28144552  T
Q  275 aatggaagatgacctcttaatgggtgaagt 304  Q
    ||||||||||||||||||||||| ||||||    
T  28144551 aatggaagatgacctcttaatggatgaagt 28144522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 103 - 297
Target Start/End: Complemental strand, 27968094 - 27967900
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactcaattttttgtgcccatattttttaccacaacaata 202  Q
    |||||||||||||||| || || ||||||| ||||||||||||||||| ||||||||| ||||||    |||||||||||||||||| ||||||||| ||    
T  27968094 ttaccattaagttgtcatgcggttgatcctcagaaaccaatgggatttcagtacttgtggtactcctcattttgtgcccatatttttcaccacaacagta 27967995  T
Q  203 tatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatgacctcttaatgg 297  Q
    ||||| | |||||||||| ||||||||||||||||| |||||||| |||| |||||  |||| || |||| |||||||||||| || ||||||||    
T  27967994 tatataagtccatgaaaacatattgcatttgattggctctgattgctcttgtggctctgaagcatatccaaaaatggaagatggccccttaatgg 27967900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 108 - 297
Target Start/End: Complemental strand, 27999421 - 27999229
Alignment:
Q  108 attaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactc---aattttttgtgcccatattttttaccacaacaatata 204  Q
    |||| ||| |||||| | ||||||| |||||||||||| | ||||||| |||| ||||||   ||||| ||||| |||||||||||||||||||||||||    
T  27999421 attacgttctcttgttgttgatcctcagaaaccaatggaactttagtatttgtggtactcctcaatttgttgtggccatattttttaccacaacaatata 27999322  T
Q  205 tatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatgacctcttaatgg 297  Q
    ||||  |||||||||| ||||||||||||||||| |||||||||  || ||| ||||||| |||||||||||||||||||| | |||||||||    
T  27999321 tatctgtccatgaaaatatattgcatttgattggctctgattgtgtttgtgggttggaagcatctccagaaatggaagatgtcttcttaatgg 27999229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 28471596 - 28471784
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactcaattttttgtgcccatattttttaccacaacaata 202  Q
    |||||||||||||||| ||| | |||||||  |||||||||| ||||| |||||||||  |||||  |  |||||||||||| ||||||||||| |||||    
T  28471596 ttaccattaagttgtcctgttgttgatcctgggaaaccaatgagatttcagtacttgtgttactccttaatttgtgcccatactttttaccacagcaata 28471695  T
Q  203 tatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatgacctct 291  Q
    || || | |||||||||||||||||| |||||||||  ||||||||  || |||||| |||| || |||||||||||||||||||||||    
T  28471696 tacattagtccatgaaaagatattgcgtttgattggacctgattgtgtttgtggcttagaagcatatccagaaatggaagatgacctct 28471784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 28491637 - 28491825
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactcaattttttgtgcccatattttttaccacaacaata 202  Q
    |||||||||||||||| ||| | |||||||  |||||||||| ||||| |||||||||  |||||  |  |||||||||||| ||||||||||| |||||    
T  28491637 ttaccattaagttgtcctgttgttgatcctgggaaaccaatgagatttcagtacttgtgttactccttaatttgtgcccatactttttaccacagcaata 28491736  T
Q  203 tatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatgacctct 291  Q
    || || | |||||||||||||||||| |||||||||  ||||||||  || |||||| |||| || |||||||||||||||||||||||    
T  28491737 tacattagtccatgaaaagatattgcgtttgattggacctgattgtgtttgtggcttagaagcatatccagaaatggaagatgacctct 28491825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 28178840 - 28178711
Alignment:
Q  126 tgatccttagaaaccaatgggattttagtacttgtagtactc---aattttttgtgcccatattttttaccacaacaatatatatcattccatgaaaaga 222  Q
    ||||||| |||||||||||||||||| ||| |||| ||||||   ||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |    
T  28178840 tgatcctgagaaaccaatgggattttcgtaattgtggtactcctcaatttgttgtgcccatattttttaccacaacaatagatatcagtccatgaaaaca 28178741  T
Q  223 tattgcatttgattgggtctgattgttctt 252  Q
    |||||||||||||||| |||||||||||||    
T  28178740 tattgcatttgattggctctgattgttctt 28178711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 28080240 - 28080088
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactc---aattttttgtgcccatattttttaccacaaca 199  Q
    ||||||||  |||||| || || ||||||| ||||| |||||||||||||||  |||||||||||   |||||  |||| |||||||||||||||||| |    
T  28080240 ttaccattttgttgtcctgcggttgatcctcagaaaacaatgggattttagtctttgtagtactcctcaatttgctgtgtccatattttttaccacaaaa 28080141  T
Q  200 atatatatcattccatgaaaagatattgcatttgattgggtctgattgttctt 252  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  28080140 atatatatcagtccatgaaaacatattgcatttgattgggtctgattgttctt 28080088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 28512642 - 28512830
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactcaattttttgtgcccatattttttaccacaacaata 202  Q
    |||||||||||||||| ||| | |||||||  |||||||||| ||||| |||||||||  |||||  |  |||||||||||| ||||||||||| |||||    
T  28512642 ttaccattaagttgtcctgttgttgatcctgggaaaccaatgagatttcagtacttgtgttactccttaatttgtgcccatactttttaccacagcaata 28512741  T
Q  203 tatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatgacctct 291  Q
    || || | |||||||||||||||||| |||||||||  | ||||||  || |||||| |||| || |||||||||||||||||||||||    
T  28512742 tacattagtccatgaaaagatattgcgtttgattggacccgattgtgtttgtggcttagaagcatatccagaaatggaagatgacctct 28512830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 11409548 - 11409457
Alignment:
Q  173 tttgtgcccatattttttaccacaacaatatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaag 264  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  11409548 tttgtgcccattttttttaccacaacaatatatatcaatccatgaaaagatattgcatttgattgggtctgattgtgcttgtggcttggaag 11409457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 19049988 - 19050100
Alignment:
Q  173 tttgtgcccatattttttaccacaacaatatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctcca 272  Q
    ||||||||||| ||||||||| |||||||||| || | ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || ||||    
T  19049988 tttgtgcccattttttttaccccaacaatatacattagtccatgaaaagatattgcatttgatagggtctgattgttcttgtggcttggaagcatatcca 19050087  T
Q  273 gaaatggaagatg 285  Q
    || ||||||||||    
T  19050088 gatatggaagatg 19050100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 103 - 275
Target Start/End: Original strand, 27463626 - 27463798
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactcaattttttgtgcccatattttttaccacaacaata 202  Q
    |||||||||||||||| ||  | ||||||| |||||| |||||||| ||||||||||| ||||||     ||||| |||| |||||||||||||||||||    
T  27463626 ttaccattaagttgtcctgccgttgatcctgagaaacgaatgggatgttagtacttgtggtactcctcaatttgttcccaaattttttaccacaacaata 27463725  T
Q  203 tatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaa 275  Q
    ||||||| ||  ||||||||| |||||||| |||||| |||||| | ||| ||||||||| | ||||||||||    
T  27463726 tatatcagtctgtgaaaagatgttgcatttcattgggcctgattctgcttgtggcttggaggcatctccagaa 27463798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 17748668 - 17748780
Alignment:
Q  173 tttgtgcccatattttttaccacaacaatatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctcca 272  Q
    ||||||||||| ||||||||| |||||||||| || | ||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||| || ||||    
T  17748668 tttgtgcccattttttttaccccaacaatatacattagtccatgaaaagatattgcatttgatagggtctgatttttcttgtggctgggaagcatatcca 17748767  T
Q  273 gaaatggaagatg 285  Q
    || ||||||||||    
T  17748768 gatatggaagatg 17748780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 28130700 - 28130616
Alignment:
Q  180 ccatattttttaccacaacaatatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaag 264  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||  | |||||| ||||||||||||||||    
T  28130700 ccatattttttaccacaacaatatatatcagtccatgaaaacatattgcatttgattgactttgattgatcttctggcttggaag 28130616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 17748535 - 17748580
Alignment:
Q  13 aaaatgtatcaatagtttcttattaacaaagtataaaaaataacat 58  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||    
T  17748535 aaaatgtatcaatagtttcttgttaaaaaagtgtaaaaaataacat 17748580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 19049855 - 19049900
Alignment:
Q  13 aaaatgtatcaatagtttcttattaacaaagtataaaaaataacat 58  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||    
T  19049855 aaaatgtatcaatagtttcttgttaaaaaagtgtaaaaaataacat 19049900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 27910679 - 27910633
Alignment:
Q  13 aaaatgtatcaatagtttcttattaacaaagtataaaaaataacatc 59  Q
    ||||||| |||||||||||||||||| ||| || |||||||||||||    
T  27910679 aaaatgtctcaatagtttcttattaaaaaaatacaaaaaataacatc 27910633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 7e-40; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 103 - 285
Target Start/End: Original strand, 9329344 - 9329529
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactc---aattttttgtgcccatattttttaccacaaca 199  Q
    ||||||||| |||||| || || ||||||| ||||||||||| | || ||| | || | ||||||   ||||| ||||||| |||| |||||||||||||    
T  9329344 ttaccattatgttgtcctgcggttgatcctcagaaaccaatgaggttgtagcatttttggtactcctcaatttgttgtgcctatatattttaccacaaca 9329443  T
Q  200 atatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatg 285  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||||| || |||||| ||||||||||    
T  9329444 atatatatcagtccatgaaaatatattgcatttgatagggtctgattgttcttgtggcttggaagcatatccagatatggaagatg 9329529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 103 - 285
Target Start/End: Original strand, 9383127 - 9383312
Alignment:
Q  103 ttaccattaagttgtcttgtggatgatccttagaaaccaatgggattttagtacttgtagtactc---aattttttgtgcccatattttttaccacaaca 199  Q
    ||||||||| |||||| || || ||||||| ||||||||||| | || ||| | || | ||||||   ||||| ||||||| |||| |||||||||||||    
T  9383127 ttaccattatgttgtcctgcggttgatcctcagaaaccaatgaggttgtagcatttttggtactcctcaatttgttgtgcctatatattttaccacaaca 9383226  T
Q  200 atatatatcattccatgaaaagatattgcatttgattgggtctgattgttcttctggcttggaagtatctccagaaatggaagatg 285  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||||| || |||||| ||||||||||    
T  9383227 atatatatcagtccatgaaaatatattgcatttgatagggtctgattgttcttgtggcttggaagcatatccagatatggaagatg 9383312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 9329279 - 9329317
Alignment:
Q  13 aaaatgtatcaatagtttcttattaacaaagtataaaaa 51  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  9329279 aaaatgtatcaatagtttcttattaaaaaagtacaaaaa 9329317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 9383062 - 9383100
Alignment:
Q  13 aaaatgtatcaatagtttcttattaacaaagtataaaaa 51  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  9383062 aaaatgtatcaatagtttcttattaaaaaagtacaaaaa 9383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 134 - 295
Target Start/End: Original strand, 8693983 - 8694144
Alignment:
Q  134 agaaaccaatgggattttagtacttgtagtactcaattttttgtgcccatattttttaccacaacaatatatatcattccatgaaaagatattgcatttg 233  Q
    |||||||||||||||||||||||||||  |||||     ||||||||||||||||||||| ||||  ||||||||| | ||||||||||||||| |||||    
T  8693983 agaaaccaatgggattttagtacttgtgttactcctcaatttgtgcccatattttttaccgcaactgtatatatcagttcatgaaaagatattgaatttg 8694082  T
Q  234 attgggtctgattgttcttctggcttggaagtatctccagaaatggaagatgacctcttaat 295  Q
    ||||||||||||||||||| | |||  |||| ||||||||||||||||| || | |||||||    
T  8694083 attgggtctgattgttcttgttgctcagaagcatctccagaaatggaaggtggcttcttaat 8694144  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 8693858 - 8693899
Alignment:
Q  13 aaaatgtatcaatagtttcttattaacaaagtataaaaaata 54  Q
    |||||||||||||||||||||||||| | |||| ||||||||    
T  8693858 aaaatgtatcaatagtttcttattaaaagagtagaaaaaata 8693899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 3699 - 3742
Alignment:
Q  116 gtcttgtggatgatccttagaaaccaatgggattttagtacttg 159  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||    
T  3699 gtcttttggatgatcctcagaaaccaatgggattttagtacttg 3742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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