View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21217_high_24 (Length: 238)
Name: NF21217_high_24
Description: NF21217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21217_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 28620951 - 28621166
Alignment:
| Q |
7 |
agaagcaaaggttttataattaccgtaaatacatatttatagtagctattttggaaatcaatacaaacccaaacaaagtattttcaacgtaagacatgaa |
106 |
Q |
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| T |
28620951 |
agaagcaaaagttttataactaccgtaaatacatatttatagtagctattttggaaatcaatacaaacccaaacaaagtattttcaacgtaagacatgaa |
28621050 |
T |
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| Q |
107 |
actaacaattttttaactgtatacgattctttaagatttacatatttaacattgctcatgttcaaagtaaacagtcattaacagttaaactagtttttcc |
206 |
Q |
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| T |
28621051 |
actaacaattttttaactgtatacgattctttaagatttacatatttaacattgttcatgttcaaagtaaatagtcattaacagttaaactagtttttcc |
28621150 |
T |
|
| Q |
207 |
tttcttcattgtaaat |
222 |
Q |
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|||||||||||||||| |
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| T |
28621151 |
tttcttcattgtaaat |
28621166 |
T |
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