View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21217_low_4 (Length: 523)

Name: NF21217_low_4
Description: NF21217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21217_low_4
NF21217_low_4
[»] chr8 (32 HSPs)
chr8 (101-507)||(31734181-31734585)
chr8 (252-428)||(22573078-22573254)
chr8 (254-437)||(39283641-39283824)
chr8 (269-428)||(40028765-40028924)
chr8 (257-428)||(556722-556895)
chr8 (257-378)||(9028635-9028756)
chr8 (433-507)||(26483598-26483672)
chr8 (269-373)||(32889949-32890053)
chr8 (433-507)||(43216367-43216441)
chr8 (433-507)||(7858594-7858668)
chr8 (433-507)||(34890194-34890268)
chr8 (433-507)||(35456045-35456118)
chr8 (433-507)||(36190838-36190912)
chr8 (437-507)||(41086410-41086480)
chr8 (433-509)||(13143965-13144042)
chr8 (269-371)||(7547857-7547959)
chr8 (269-352)||(11066502-11066585)
chr8 (280-431)||(12595799-12595950)
chr8 (433-501)||(15824657-15824725)
chr8 (269-426)||(38503855-38504009)
chr8 (433-507)||(13143830-13143904)
chr8 (437-507)||(7022427-7022497)
chr8 (447-507)||(41362341-41362401)
chr8 (433-467)||(8709806-8709840)
chr8 (433-467)||(16879412-16879446)
chr8 (433-507)||(34158310-34158385)
chr8 (433-507)||(15957931-15958005)
chr8 (433-507)||(28348676-28348750)
chr8 (475-503)||(8712594-8712622)
chr8 (475-507)||(8745649-8745681)
chr8 (475-507)||(14576214-14576246)
chr8 (475-507)||(26954454-26954486)
[»] chr4 (44 HSPs)
chr4 (252-433)||(45413766-45413947)
chr4 (255-366)||(2183300-2183411)
chr4 (264-431)||(19181421-19181588)
chr4 (252-435)||(34666341-34666528)
chr4 (270-433)||(42964462-42964623)
chr4 (255-373)||(26635260-26635378)
chr4 (253-366)||(36625533-36625646)
chr4 (257-425)||(55945653-55945820)
chr4 (433-507)||(4058781-4058855)
chr4 (433-507)||(20281657-20281731)
chr4 (258-403)||(33451291-33451436)
chr4 (433-507)||(47867945-47868019)
chr4 (433-503)||(2229317-2229387)
chr4 (433-507)||(10069763-10069837)
chr4 (433-507)||(28669013-28669087)
chr4 (433-507)||(39078223-39078296)
chr4 (257-362)||(44126013-44126118)
chr4 (434-507)||(17794554-17794627)
chr4 (252-366)||(43481302-43481414)
chr4 (437-507)||(5483294-5483364)
chr4 (437-507)||(7654683-7654753)
chr4 (433-507)||(16604858-16604932)
chr4 (433-503)||(26916395-26916465)
chr4 (433-507)||(35310754-35310828)
chr4 (433-503)||(41414623-41414693)
chr4 (433-507)||(42915596-42915670)
chr4 (433-507)||(55580736-55580810)
chr4 (433-509)||(56318082-56318158)
chr4 (433-504)||(24940434-24940505)
chr4 (433-503)||(14332830-14332900)
chr4 (433-507)||(20716246-20716320)
chr4 (433-507)||(21722694-21722768)
chr4 (257-428)||(22202869-22203040)
chr4 (433-493)||(16473828-16473888)
chr4 (447-507)||(29511491-29511551)
chr4 (447-507)||(37911950-37912010)
chr4 (391-425)||(2182904-2182938)
chr4 (257-303)||(35320693-35320739)
chr4 (433-507)||(8683318-8683392)
chr4 (433-507)||(32203279-32203353)
chr4 (475-507)||(23978169-23978201)
chr4 (475-507)||(46070576-46070608)
chr4 (446-507)||(47516216-47516277)
chr4 (475-507)||(49080323-49080355)
[»] chr1 (50 HSPs)
chr1 (252-432)||(26793696-26793876)
chr1 (258-428)||(19806758-19806930)
chr1 (252-426)||(9383223-9383397)
chr1 (171-374)||(6768259-6768466)
chr1 (250-431)||(4076340-4076521)
chr1 (269-364)||(50004909-50005004)
chr1 (269-433)||(4950129-4950292)
chr1 (269-428)||(45792691-45792849)
chr1 (252-340)||(42471969-42472057)
chr1 (433-507)||(12448986-12449060)
chr1 (433-507)||(39555605-39555679)
chr1 (258-365)||(49236173-49236280)
chr1 (433-507)||(2126106-2126180)
chr1 (433-507)||(11241095-11241169)
chr1 (433-507)||(15959659-15959733)
chr1 (433-507)||(32624024-32624098)
chr1 (262-357)||(7904161-7904256)
chr1 (262-357)||(8002685-8002780)
chr1 (325-427)||(42472062-42472164)
chr1 (437-507)||(3861718-3861788)
chr1 (433-507)||(24190537-24190611)
chr1 (433-507)||(28016765-28016839)
chr1 (433-507)||(43667322-43667396)
chr1 (433-507)||(46818521-46818595)
chr1 (435-507)||(6786906-6786978)
chr1 (325-428)||(12855304-12855407)
chr1 (444-507)||(6785524-6785587)
chr1 (433-508)||(32742221-32742296)
chr1 (433-503)||(35691465-35691535)
chr1 (433-507)||(52985001-52985075)
chr1 (433-507)||(25391750-25391823)
chr1 (444-507)||(2246044-2246107)
chr1 (433-507)||(7467981-7468056)
chr1 (433-467)||(13136573-13136607)
chr1 (437-507)||(43765362-43765433)
chr1 (257-303)||(49288051-49288097)
chr1 (433-507)||(3076363-3076437)
chr1 (261-302)||(7902048-7902089)
chr1 (261-302)||(7905498-7905539)
chr1 (325-370)||(20018611-20018656)
chr1 (433-507)||(33431627-33431701)
chr1 (433-503)||(39932591-39932661)
chr1 (437-507)||(40718746-40718816)
chr1 (475-507)||(5950507-5950539)
chr1 (475-507)||(8889758-8889790)
chr1 (475-507)||(13351748-13351780)
chr1 (475-507)||(15912266-15912298)
chr1 (475-507)||(16688204-16688236)
chr1 (475-507)||(47600100-47600132)
chr1 (318-362)||(49288006-49288050)
[»] chr2 (28 HSPs)
chr2 (252-426)||(6457543-6457717)
chr2 (252-427)||(40626413-40626588)
chr2 (252-427)||(40054459-40054634)
chr2 (253-426)||(6452409-6452581)
chr2 (433-507)||(3201394-3201468)
chr2 (433-507)||(41528324-41528398)
chr2 (433-507)||(43415469-43415543)
chr2 (433-509)||(45085323-45085399)
chr2 (269-366)||(18665165-18665262)
chr2 (437-507)||(45660433-45660503)
chr2 (269-369)||(5256379-5256479)
chr2 (269-363)||(7670385-7670479)
chr2 (270-371)||(16567724-16567825)
chr2 (433-507)||(35115821-35115896)
chr2 (433-507)||(6110217-6110291)
chr2 (433-507)||(11617092-11617166)
chr2 (433-507)||(14874031-14874105)
chr2 (433-507)||(19264168-19264242)
chr2 (433-507)||(28599166-28599240)
chr2 (433-507)||(35517191-35517265)
chr2 (448-507)||(28858377-28858436)
chr2 (433-507)||(12938310-12938384)
chr2 (433-503)||(33198649-33198719)
chr2 (437-507)||(33677551-33677621)
chr2 (431-507)||(24204545-24204621)
chr2 (447-507)||(26998385-26998445)
chr2 (475-507)||(16494986-16495018)
chr2 (446-507)||(32010170-32010231)
[»] chr7 (32 HSPs)
chr7 (255-428)||(41482419-41482592)
chr7 (259-435)||(39594573-39594747)
chr7 (252-433)||(24429627-24429809)
chr7 (252-435)||(2333983-2334168)
chr7 (269-426)||(39644849-39645006)
chr7 (269-436)||(23318951-23319118)
chr7 (255-430)||(45884641-45884815)
chr7 (433-507)||(6191113-6191187)
chr7 (433-507)||(46760275-46760349)
chr7 (273-371)||(10026437-10026535)
chr7 (433-507)||(18102598-18102672)
chr7 (433-507)||(19912787-19912861)
chr7 (433-507)||(20123698-20123772)
chr7 (328-371)||(44107776-44107819)
chr7 (433-507)||(12632362-12632436)
chr7 (433-507)||(25944644-25944718)
chr7 (437-507)||(35923320-35923389)
chr7 (437-507)||(45486023-45486093)
chr7 (433-507)||(14805938-14806011)
chr7 (433-507)||(15252932-15253005)
chr7 (433-507)||(4910653-4910725)
chr7 (445-507)||(25737657-25737719)
chr7 (475-507)||(10248596-10248628)
chr7 (308-371)||(24799451-24799514)
chr7 (269-332)||(47038533-47038596)
chr7 (433-466)||(14574673-14574706)
chr7 (451-509)||(35068885-35068943)
chr7 (476-509)||(35888030-35888063)
chr7 (475-507)||(4069071-4069103)
chr7 (475-507)||(31769022-31769054)
chr7 (292-364)||(44335070-44335142)
chr7 (271-303)||(45980471-45980503)
[»] chr3 (44 HSPs)
chr3 (244-433)||(40416886-40417075)
chr3 (279-426)||(48936324-48936469)
chr3 (252-435)||(45818598-45818781)
chr3 (252-433)||(32490841-32491022)
chr3 (257-363)||(20524860-20524966)
chr3 (433-507)||(30189643-30189717)
chr3 (433-507)||(50651015-50651089)
chr3 (257-366)||(51976193-51976302)
chr3 (252-350)||(43545434-43545532)
chr3 (433-507)||(6438155-6438229)
chr3 (433-507)||(37075032-37075106)
chr3 (437-507)||(41476318-41476388)
chr3 (331-426)||(39795314-39795409)
chr3 (253-431)||(7038544-7038722)
chr3 (437-507)||(37042399-37042469)
chr3 (433-507)||(46711636-46711710)
chr3 (433-507)||(53270307-53270381)
chr3 (252-303)||(45850751-45850802)
chr3 (435-507)||(47864263-47864335)
chr3 (444-507)||(9264623-9264686)
chr3 (433-507)||(11054289-11054364)
chr3 (444-507)||(23311582-23311645)
chr3 (433-507)||(23910491-23910565)
chr3 (433-507)||(26724969-26725043)
chr3 (433-507)||(28875478-28875552)
chr3 (433-503)||(35963228-35963298)
chr3 (264-426)||(38457678-38457844)
chr3 (475-507)||(21214307-21214339)
chr3 (476-507)||(7886638-7886669)
chr3 (252-366)||(32794879-32794993)
chr3 (433-467)||(54464874-54464908)
chr3 (433-507)||(7866461-7866535)
chr3 (433-507)||(29235259-29235333)
chr3 (433-507)||(31836991-31837065)
chr3 (450-507)||(579133-579190)
chr3 (475-507)||(10014335-10014367)
chr3 (475-507)||(10114977-10115009)
chr3 (475-507)||(10252077-10252109)
chr3 (475-507)||(16033007-16033039)
chr3 (446-507)||(19464147-19464208)
chr3 (447-504)||(25242170-25242227)
chr3 (475-503)||(30454745-30454773)
chr3 (475-507)||(34194954-34194986)
chr3 (475-507)||(54725630-54725662)
[»] chr6 (17 HSPs)
chr6 (257-374)||(8547436-8547553)
chr6 (264-381)||(8573796-8573913)
chr6 (433-507)||(11082264-11082338)
chr6 (433-503)||(21542490-21542560)
chr6 (262-425)||(12771875-12772038)
chr6 (325-427)||(14227943-14228045)
chr6 (433-507)||(35129073-35129148)
chr6 (437-507)||(3095743-3095812)
chr6 (252-294)||(16342710-16342752)
chr6 (264-346)||(18596636-18596718)
chr6 (433-507)||(30794211-30794285)
chr6 (476-507)||(12461491-12461522)
chr6 (447-507)||(16524445-16524505)
chr6 (259-361)||(129102-129204)
chr6 (433-467)||(17751763-17751797)
chr6 (475-507)||(5300661-5300693)
chr6 (475-507)||(16013493-16013525)
[»] chr5 (30 HSPs)
chr5 (252-425)||(34731215-34731388)
chr5 (269-371)||(13109709-13109811)
chr5 (269-371)||(13039715-13039817)
chr5 (433-507)||(34425398-34425472)
chr5 (433-507)||(5984127-5984201)
chr5 (433-507)||(20644082-20644156)
chr5 (433-507)||(37522608-37522682)
chr5 (433-507)||(42273715-42273789)
chr5 (433-507)||(43589981-43590055)
chr5 (435-507)||(11261905-11261977)
chr5 (433-507)||(6686452-6686527)
chr5 (433-507)||(19413209-19413283)
chr5 (433-507)||(43454342-43454416)
chr5 (433-509)||(37562780-37562857)
chr5 (475-509)||(104275-104309)
chr5 (433-503)||(20039174-20039244)
chr5 (433-507)||(32111070-32111144)
chr5 (475-507)||(8506499-8506531)
chr5 (446-507)||(12912326-12912387)
chr5 (253-305)||(26447895-26447947)
chr5 (448-507)||(8959708-8959767)
chr5 (433-467)||(23233519-23233553)
chr5 (313-375)||(32529433-32529495)
chr5 (433-507)||(39505251-39505326)
chr5 (392-425)||(15416362-15416395)
chr5 (475-507)||(5369092-5369124)
chr5 (475-507)||(10153989-10154021)
chr5 (393-437)||(13417140-13417184)
chr5 (475-507)||(31690681-31690713)
chr5 (475-507)||(32017771-32017803)
[»] scaffold0774 (1 HSPs)
scaffold0774 (433-507)||(3447-3521)
[»] scaffold0442 (1 HSPs)
scaffold0442 (433-507)||(10113-10187)
[»] scaffold0300 (1 HSPs)
scaffold0300 (433-507)||(592-666)
[»] scaffold0132 (2 HSPs)
scaffold0132 (437-507)||(1080-1150)
scaffold0132 (437-507)||(9040-9110)
[»] scaffold0045 (1 HSPs)
scaffold0045 (433-507)||(78025-78099)
[»] scaffold0018 (1 HSPs)
scaffold0018 (433-507)||(154929-155002)


Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 101 - 507
Target Start/End: Complemental strand, 31734585 - 31734181
Alignment:
Q  101 ctaagagataggggaggctggcggtggagtggaggaagatgaacagttgtagagaagaaaaaacaattgcaatcaattttgaaatagatcattggagagg 200  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31734585 ctaagagatagtg-aggctggcggtggagtggaggaagatgaacagttgcagagaagaaaaaacaattacaatcaattttgaaatagatcattggagagg 31734487  T
Q  201 gtgggagtcgaaagagggttttgaagnnnnnnngatgcgcatgtgataatattatgctatcaggttgttaacccaccaaaaactaaggataaaaataaca 300  Q
    ||||||||||||||||||||||||||       ||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  31734486 gtgggagtcgaaagagggttttgaagaataaaagatgcgcatgtgacaatattatgttatcatgttgttaatccaccaaaaactaaggataaaaataaca 31734387  T
Q  301 aagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatc 400  Q
    ||| || ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  31734386 aagggtggatgggataagattggaaataggtttaatttatcatttcttattggtgcaccaaacaacggattaaagcaggataggaaagtcctatcatatc 31734287  T
Q  401 atgtctccctatcatgtgcaccaaacggaccctaagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaat 500  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||       ||||||||| ||||| ||||||||||    
T  31734286 atgtctctctatcatgtgcaccaaacgg-gcctaagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaat 31734188  T
Q  501 tttcatt 507  Q
    |||||||    
T  31734187 tttcatt 31734181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 252 - 428
Target Start/End: Complemental strand, 22573254 - 22573078
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||| ||||||  |  |||||||| |||| |||| ||||| || |||||||||||| ||    
T  22573254 ttatcctatcatgttgttaacccaccaaaaactaaggataagaattacaaaggttcaataggataggattagaaacaggttaaacttatcatttcctgtt 22573155  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacgg 428  Q
    ||||||||||||||||||||||  |||||| ||| | ||  |||||||||||||||| ||||||| |||||||||||    
T  22573154 ggtgcaccaaacaacggattgagtcaggataggatattctaatcatatcatgtctccttatcatgcgcaccaaacgg 22573078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 254 - 437
Target Start/End: Complemental strand, 39283824 - 39283641
Alignment:
Q  254 atgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattgg 353  Q
    |||||||||||||| |||||||||||||| ||| |||||||| || |||| ||  ||| |||| ||||| |||  ||||||||||||| |||  | ||||    
T  39283824 atgctatcaggttgctaacccaccaaaaattaaagataaaaaaaataaagggtgaatatgataggattgaaaaatggtttaatttatccttttatgttgg 39283725  T
Q  354 tgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccctaaga 437  Q
    |||| ||||||| |||||||  ||||||  || |||  |||| ||| |||||| ||||||||||||||| ||||| || |||||    
T  39283724 tgcatcaaacaatggattgactcaggatatgatagttttatcctattatgtcttcctatcatgtgcacccaacgggccgtaaga 39283641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 269 - 428
Target Start/End: Complemental strand, 40028924 - 40028765
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaag-agtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacg 367  Q
    |||||||| |||  ||||||||||||||||||||| || || |||||| ||||| |||| ||||| || |||||||||||| |||| ||||||||||||     
T  40028924 taacccacaaaatcctaaggataaaaataacaaaggaggag-taggatgagattagaaaaaggttaaagttatcatttcctgttggcgcaccaaacaaca 40028826  T
Q  368 gattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacgg 428  Q
    |||||| |||||||  || | |   |||||||| ||||||| |||| || |||||||||||    
T  40028825 gattgaggcaggatatgatattttaatcatatcctgtctccttatcctgcgcaccaaacgg 40028765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 556895 - 556722
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaa--ctaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggt 354  Q
    |||||| |||| ||||||||||||||  | |||||| | || ||||||| ||  |||||||| |||| ||||||||||||||||||||||| |||||| |    
T  556895 ctatcatgttgctaacccaccaaaaaaacaaaggattagaaaaacaaagggtgaataggatatgattagaaataggtttaatttatcattttctattgtt 556796  T
Q  355 gcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacgg 428  Q
    |||| ||||| ||| ||| | ||||||  ||  |   ||||||||| | ||||| ||||||||||| |||||||    
T  556795 gcacgaaacagcggtttggatcaggatatgattggtttatcatatcctatctccttatcatgtgcatcaaacgg 556722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 378
Target Start/End: Original strand, 9028635 - 9028756
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgc 356  Q
    ||||||||||| ||||||| ||||||| |||||||| ||| ||||||  |  |||||||| ||||  |||||||||||| ||||| |||  | |||||||    
T  9028635 ctatcaggttgctaacccatcaaaaaccaaggataagaattacaaaggttcaataggataggattaaaaataggtttaaattatccttttatgttggtgc 9028734  T
Q  357 accaaacaacggattgaagcag 378  Q
    |||||||||| |||| ||||||    
T  9028735 accaaacaaccgatttaagcag 9028756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 26483672 - 26483598
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||||||||||||||       |||||||||  ||||||||||||||||||||||    
T  26483672 taagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcatt 26483598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 373
Target Start/End: Complemental strand, 32890053 - 32889949
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaag-agtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacg 367  Q
    ||||||||||||| ||||||||||||| ||||||| || || | ||||| |||| |||||||||| || |||||||||| |||||| ||| |||||||||    
T  32890053 taacccaccaaaatctaaggataaaaacaacaaaggagaag-tgggataggattagaaataggttaaacttatcatttcatattggggcatcaaacaacg 32889955  T
Q  368 gattga 373  Q
    ||||||    
T  32889954 gattga 32889949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 43216367 - 43216441
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  43216367 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 43216441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 7858668 - 7858594
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||||||||||||||||| |||       ||||||||| |||||||||||||||||||||||    
T  7858668 taagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcatt 7858594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 34890194 - 34890268
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||| |||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  34890194 taagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 34890268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 35456045 - 35456118
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||| |||||| |||       |||||||||||||||||||||||||||||||||    
T  35456045 taagaatttgaagtatagttttttatgtttt-ttttgaaaaagttttatagaaagatgtaaaaacaattttcatt 35456118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 36190912 - 36190838
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  36190912 taagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 36190838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 41086410 - 41086480
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||| ||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||    
T  41086410 aatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcatt 41086480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 13143965 - 13144042
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt-nnnnnnngttttatagaaagatgtaaaaacaattttcattag 509  Q
    |||||||||| ||||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||    
T  13143965 taagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttcattag 13144042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 7547959 - 7547857
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaag-agtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacg 367  Q
    |||||||||||||||||||||||| |||| ||||| || || | ||||| |||   ||||||||| || |||||||||| | ||||||||||||||||||    
T  7547959 taacccaccaaaaactaaggataataatatcaaaggagaag-tgggataggataaaaaataggttaaacttatcatttcttgttggtgcaccaaacaacg 7547861  T
Q  368 gatt 371  Q
    ||||    
T  7547860 gatt 7547857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 11066585 - 11066502
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattg 352  Q
    ||||| |||||||| ||||||||||||||||||||  |   ||||||| |||| ||||||||||||| ||||| ||||||||||    
T  11066585 taacctaccaaaaattaaggataaaaataacaaaggctgagtaggataggattagaaataggtttaagttatcctttcctattg 11066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 431
Target Start/End: Original strand, 12595799 - 12595950
Alignment:
Q  280 aaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacggattgaagcagg 379  Q
    ||||||||||| ||||||||||||  | ||||||||| |||    | | |||||| |||||||| || ||||  ||||||||||||  |||| || ||||    
T  12595799 aaactaaggattaaaataacaaaggcttgataggataggataactatttggtttagtttatcatatcatattactgcaccaaacaaaagatttaaacagg 12595898  T
Q  380 atgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggacc 431  Q
    || ||| | |  |||||||||||||||| ||||| || ||||||||||||||    
T  12595899 ataggataattttatcatatcatgtctctctatcttgcgcaccaaacggacc 12595950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 501
Target Start/End: Original strand, 15824657 - 15824725
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatt 501  Q
    |||||||||||||||||||||||||||||||||||       |||| || |||||||||||||||||||    
T  15824657 taagaatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaatt 15824725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 426
Target Start/End: Original strand, 38503855 - 38504009
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    ||||||||||||||||||  ||||||||||||||| ||   ||||||| | || ||| |  |||||| ||||  |||||| |||||||||||||||||      
T  38503855 taacccaccaaaaactaaaaataaaaataacaaagggtgagtaggatagggttagaagtgagtttaagttattctttcct-ttggtgcaccaaacaacaa 38503953  T
Q  369 attgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    |||||| ||||||  || |||  |||| |||||||||| ||||  |||||||||||||    
T  38503954 attgaaacaggatatgatagttttatcctatcatgtcttccta--atgtgcaccaaac 38504009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 13143904 - 13143830
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||| |||||||||||||| ||       |||| |||| |||||||||||||||||||||||    
T  13143904 taagaatttgaagtataattttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcatt 13143830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 7022427 - 7022497
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||||||       ||||||||| ||||| |||||| ||||||||||    
T  7022427 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcatt 7022497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 507
Target Start/End: Original strand, 41362341 - 41362401
Alignment:
Q  447 atagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||| |||||       ||||||||| |||||||||||||||||||||||    
T  41362341 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 41362401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Original strand, 8709806 - 8709840
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt 467  Q
    |||||||||| ||||||||||||||||||||||||    
T  8709806 taagaatttggagtatagttttttgtgttttcttt 8709840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Original strand, 16879412 - 16879446
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt 467  Q
    ||||||||||||||||| |||||||||||||||||    
T  16879412 taagaatttgaagtataattttttgtgttttcttt 16879446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 34158310 - 34158385
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnn-gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||| || |||||||||| |||||||||||||        ||||||||| |||||||||||||||||||||||    
T  34158310 taagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattttcatt 34158385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 15957931 - 15958005
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||| |||||||||| |||||||||||||       ||||||||| || | ||||||||||||||||||    
T  15957931 taagaaattggagtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatt 15958005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 28348750 - 28348676
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||||| |||||| ||||||||       ||||||||| || ||||||||||||||| ||||    
T  28348750 taagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccatt 28348676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 503
Target Start/End: Complemental strand, 8712622 - 8712594
Alignment:
Q  475 gttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||||||||||||||||||||||    
T  8712622 gttttatagaaagatgtaaaaacaatttt 8712594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 8745681 - 8745649
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  8745681 gttttataggaagatgtaaaaacaattttcatt 8745649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 14576214 - 14576246
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||| ||||||||||    
T  14576214 gttttatagaaagatgtaaaaataattttcatt 14576246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 26954454 - 26954486
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  26954454 gttttataggaagatgtaaaaacaattttcatt 26954486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 6e-60; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 252 - 433
Target Start/End: Original strand, 45413766 - 45413947
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||| |||||||||    
T  45413766 ttatgctatcaggttgctaacccaccaaaaactaaggataaaaataacaaaggttagataggataggataggaaataggtttaatttatcctttcctatt 45413865  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccct 433  Q
    ||||||||||||||| ||||||| || |||  || ||| ||||| |||| ||||||||||||| ||||||||||||||||||    
T  45413866 ggtgcaccaaacaaccgattgaatcaagatatgatagttctatcctatcctgtctccctatcaagtgcaccaaacggaccct 45413947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 255 - 366
Target Start/End: Complemental strand, 2183411 - 2183300
Alignment:
Q  255 tgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggt 354  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||  | ||||||||| ||||||||||  |||||||||||| ||| ||||||||    
T  2183411 tgctatcaggttgctaacccaccaaaaattaaggataaaaataacaaaggttggataggataggattggaaatgagtttaatttatccttttctattggt 2183312  T
Q  355 gcaccaaacaac 366  Q
    ||||||||||||    
T  2183311 gcaccaaacaac 2183300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 264 - 431
Target Start/End: Original strand, 19181421 - 19181588
Alignment:
Q  264 gttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaac 363  Q
    |||| ||| ||||||||||||||||| |||||||| ||||  |   ||||||| |||| ||||||||||||||||||||| || | ||||||||||||||    
T  19181421 gttgctaatccaccaaaaactaaggacaaaaataataaaggatgagtaggataggattagaaataggtttaatttatcatatcatgttggtgcaccaaac 19181520  T
Q  364 aacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggacc 431  Q
    ||  ||||| | |||||| ||| | |  |||||||||||||||| |||||||||||||||||||||||    
T  19181521 aatagattggatcaggataggataattttatcatatcatgtctctctatcatgtgcaccaaacggacc 19181588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 252 - 435
Target Start/End: Complemental strand, 34666528 - 34666341
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcc---- 347  Q
    |||||||||||||||| |||||||| ||||  || |||||||||||| ||||||   |||||||| |||| ||||||||||||| |||||||||||        
T  34666528 ttatgctatcaggttgctaacccacaaaaagttacggataaaaataagaaagagggaataggatatgattagaaataggtttaagttatcatttcctata 34666429  T
Q  348 tattggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccctaa 435  Q
    ||||| |||||||||||||| ||||||||| |||  || |||  ||||||||  ||||| | |||| |||||||||||||||||||||    
T  34666428 tattgctgcaccaaacaacgtattgaagcaagatatgatagttgtatcatattctgtcttcttatcctgtgcaccaaacggaccctaa 34666341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 270 - 433
Target Start/End: Original strand, 42964462 - 42964623
Alignment:
Q  270 aacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgga 369  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||| |||  | ||| ||||||| ||||| ||||||||||||||| |||| | ||||    
T  42964462 aacccaccaaaaactaaggattaaaataaca--gagtagataggataggataagtaatgggtttaaattatcctttcctattggtgcaacaaataccgga 42964559  T
Q  370 ttgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccct 433  Q
    ||  |||||||| ||| |||  ||||||||| ||||| | |||| || ||||||||| ||||||    
T  42964560 tttcagcaggataggatagttttatcatatcctgtctgcttatcctgcgcaccaaacagaccct 42964623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 373
Target Start/End: Original strand, 26635260 - 26635378
Alignment:
Q  255 tgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaa-gagtagataggataagattggaaataggtttaatttatcatttcctattgg 353  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||| ||| || |||||||  |||||||||||||| |||||||||| || | ||||    
T  26635260 tgctatcaggttgctaacccaccaaaaactaaggataagaataataaaggaggag-taggatagaattggaaataggttaaatttatcatatcatgttgg 26635358  T
Q  354 tgcaccaaacaacggattga 373  Q
    ||||||||| ||||||||||    
T  26635359 tgcaccaaaaaacggattga 26635378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 253 - 366
Target Start/End: Original strand, 36625533 - 36625646
Alignment:
Q  253 tatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattg 352  Q
    |||||||||| |||| ||||||| |||||| ||||||| | ||| |||||| ||  |||||||| |||| | ||||||||||||||||||| |||||||     
T  36625533 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaagggtgaataggataggattcgtaataggtttaatttatcatatcctatta 36625632  T
Q  353 gtgcaccaaacaac 366  Q
    ||||||||||||||    
T  36625633 gtgcaccaaacaac 36625646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 425
Target Start/End: Original strand, 55945653 - 55945820
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgc 356  Q
    |||||| ||||||||||||||||||  ||| ||| ||||||| |||  |   |||||||| |||| ||||||| ||  ||||||| ||||||||||||||    
T  55945653 ctatcatgttgttaacccaccaaaagttaaagattaaaataagaaatggagaataggataggattagaaatagattggatttatcctttcctattggtgc 55945752  T
Q  357 accaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaa 425  Q
    ||||||||||||||||| | ||| | ||| | |   |||||||||||||| | ||||||||||||||||    
T  55945753 accaaacaacggattgaggaagggtaggatattttaatcatatcatgtct-cttatcatgtgcaccaaa 55945820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 4058855 - 4058781
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  4058855 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 4058781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 20281731 - 20281657
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  20281731 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 20281657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 403
Target Start/End: Complemental strand, 33451436 - 33451291
Alignment:
Q  258 tatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgca 357  Q
    ||||| |||||||||||| |||||||||||||| | ||| ||||||  |  ||||||||  | | | |||||||||| |||||||| || ||||||||||    
T  33451436 tatcatgttgttaacccatcaaaaactaaggattataattacaaaggatgaataggatagaagtagtaataggtttattttatcatatcatattggtgca 33451337  T
Q  358 ccaaacaacggattgaagcaggatgggaaagtcctatcatatcatg 403  Q
    |||||||||| ||| ||| |||||  || |||  ||||||||||||    
T  33451336 ccaaacaacgaatttaagtaggatacgatagttttatcatatcatg 33451291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 47868019 - 47867945
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  47868019 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 47867945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 503
Target Start/End: Complemental strand, 2229387 - 2229317
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||    
T  2229387 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 2229317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 10069837 - 10069763
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||    
T  10069837 taagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcatt 10069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 28669013 - 28669087
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||||       ||||||||| || ||||||||||||||||||||    
T  28669013 taagaatttaaagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcatt 28669087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 39078296 - 39078223
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  39078296 taagaatttggagtatagttttttgtgttttctttggaaaaagttttatag-aagatgtaaaaacaattttcatt 39078223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 44126118 - 44126013
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgc 356  Q
    |||||| |||| ||||||| ||||||| ||| || | || ||||||  ||  |||||||| |||| |||||| ||||||||||||||||||||||| |||    
T  44126118 ctatcaagttgctaacccatcaaaaacaaagaattagaaaaacaaaaggtgaataggataggattagaaataagtttaatttatcatttcctattgctgc 44126019  T
Q  357 accaaa 362  Q
    ||||||    
T  44126018 accaaa 44126013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 434 - 507
Target Start/End: Original strand, 17794554 - 17794627
Alignment:
Q  434 aagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||| |||||||||        |||||||| |||||||||||||||||||||||    
T  17794554 aagaatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttcatt 17794627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 366
Target Start/End: Original strand, 43481302 - 43481414
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||||||||||||||| ||| ||| ||||||||| |||||||||||| |||  ||  ||| |||  |||| |||||  |||||||||||| |||| ||||    
T  43481302 ttatgctatcaggttgctaatccaacaaaaacta-ggataaaaataataaaaggtgaataagatg-gattagaaatgagtttaatttatcctttcttatt 43481399  T
Q  352 ggtgcaccaaacaac 366  Q
    |||||||||||||||    
T  43481400 ggtgcaccaaacaac 43481414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 5483294 - 5483364
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||| |||||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  5483294 aatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcatt 5483364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 7654753 - 7654683
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||||||       ||||||||| ||||| |||||||||||||||||    
T  7654753 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcatt 7654683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 16604858 - 16604932
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  ||||||||||||||||||||||||       ||||||||| ||||||| |||||||||||||||    
T  16604858 taagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcatt 16604932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 503
Target Start/End: Complemental strand, 26916465 - 26916395
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| ||||| ||||||||||||||||||       ||||||||| |||||||||||||||||||    
T  26916465 taagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttt 26916395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 35310754 - 35310828
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| || |||||||||||||||||||||       |||| || |||||||||||||||||||||||||    
T  35310754 taagaatttgtagcatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcatt 35310828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 503
Target Start/End: Original strand, 41414623 - 41414693
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    ||||||| || ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||    
T  41414623 taagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttt 41414693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 42915670 - 42915596
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| || |||||||||||||||||||||       |||| || |||||||||||||||||||||||||    
T  42915670 taagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcatt 42915596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 55580810 - 55580736
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||| ||||||||||       ||| ||||| |||||||||||||||||||||||    
T  55580810 taagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcatt 55580736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 56318082 - 56318158
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcattag 509  Q
    |||||||||  ||||| ||||||||||||||||||       | ||||||| |||||||||||||||||||||||||    
T  56318082 taagaatttagagtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcattag 56318158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 24940505 - 24940434
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttc 504  Q
    |||||||||| ||||||||||||||| ||||||||       ||||||||  ||||||||||||||||||||    
T  24940505 taagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttc 24940434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 503
Target Start/End: Complemental strand, 14332900 - 14332830
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| | ||| ||||||||||||||||||       ||||||||| |||||||||||||||||||    
T  14332900 taagaatttggaatatggttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 14332830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 20716320 - 20716246
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||||| |||||  |||| |||       |||||||||||||||||||||||||||||||||    
T  20716320 taagaatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcatt 20716246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 21722694 - 21722768
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| ||||||||| |||| ||||||||||       ||||||||| |||||||||||| ||||||||||    
T  21722694 taagaattttaagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttcatt 21722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 428
Target Start/End: Complemental strand, 22203040 - 22202869
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaa-gagtagataggataagattggaaataggtttaatttatcatttcctattggtg 355  Q
    ||||||||||  |||||||||||||   |||||| ||||||||||| |||  | ||||||| ||||  ||||||||| || |||||||||| ||| |  |    
T  22203040 ctatcaggtttgtaacccaccaaaagtaaaggattaaaataacaaaagagggg-taggataggattaaaaataggttaaacttatcatttcatatggtcg 22202942  T
Q  356 caccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacgg 428  Q
    || ||||||||||||||   || ||| ||| | ||  |||||||| ||||||| |||| || |||||||||||    
T  22202941 caacaaacaacggattgggacacgataggatattctgatcatatcctgtctccttatcctgcgcaccaaacgg 22202869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 493
Target Start/End: Complemental strand, 16473888 - 16473828
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaa 493  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||    
T  16473888 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaa 16473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 29511551 - 29511491
Alignment:
Q  447 atagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||| |||||       ||||||||| |||||||||||||||||||||||    
T  29511551 atagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcatt 29511491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 37912010 - 37911950
Alignment:
Q  447 atagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||| |||||       |||||||||||| ||||||||||||||||||||    
T  37912010 atagttttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattttcatt 37911950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 425
Target Start/End: Complemental strand, 2182938 - 2182904
Alignment:
Q  391 ctatcatatcatgtctccctatcatgtgcaccaaa 425  Q
    |||| ||||||||||||||||||||||||||||||    
T  2182938 ctattatatcatgtctccctatcatgtgcaccaaa 2182904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 35320739 - 35320693
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaag 303  Q
    ||||||||||  ||| |||||||||||||||||| ||||||||||||    
T  35320739 ctatcaggtttgtaaaccaccaaaaactaaggattaaaataacaaag 35320693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 8683318 - 8683392
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| || |||||||||||||||||||||       |||| || |||| ||||||||| ||||||||||    
T  8683318 taagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttcatt 8683392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 32203353 - 32203279
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| ||||||||||||||||  |||||||       ||||||| | ||||| |||||||||||||||||    
T  32203353 taagaatttaaagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttcatt 32203279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 23978169 - 23978201
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcatt 23978201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 46070576 - 46070608
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  46070576 gttttataggaagatgtaaaaacaattttcatt 46070608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 47516216 - 47516277
Alignment:
Q  446 tatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||| |||||       ||||||||| |||| ||||||||||||||||||    
T  47516216 tatagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcatt 47516277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 49080355 - 49080323
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  49080355 gttttataggaagatgtaaaaacaattttcatt 49080323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 5e-48; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 252 - 432
Target Start/End: Complemental strand, 26793876 - 26793696
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagat-aggataagattggaaataggtttaatttatcatttcctat 350  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| |||||| |||| |||||| |||||| ||||| ||| ||||    
T  26793876 ttatgctatcaggttgctaacccaccaaaaactaagaataaaaataacaaag-gttgattaggataggattagaaataagtttaagttatccttttctat 26793778  T
Q  351 tggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccc 432  Q
    |||||||||||||||||||||||| ||||||  || ||| |||||||||||||||| | ||||||||||||||||| |||||    
T  26793777 tggtgcaccaaacaacggattgaatcaggatatgatagttctatcatatcatgtcttcttatcatgtgcaccaaacagaccc 26793696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 258 - 428
Target Start/End: Original strand, 19806758 - 19806930
Alignment:
Q  258 tatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgc- 356  Q
    ||||||||||||||||||||||||||||||||| | || ||||||||||  |||||||| |||| ||||||||||||||||||| |||||||||| |||     
T  19806758 tatcaggttgttaacccaccaaaaactaaggattagaaaaacaaagagtgaataggataggattagaaataggtttaatttatcctttcctattgatgca 19806857  T
Q  357 -accaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacgg 428  Q
     |||||||| | |||||||  ||||| ||| |||  ||||||||| | ||||| |||||||||||||||||||    
T  19806858 aaccaaacaccagattgaataaggataggatagtgttatcatatcctatctccttatcatgtgcaccaaacgg 19806930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 252 - 426
Target Start/End: Original strand, 9383223 - 9383397
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||||||||||||||| ||||||| |||||| ||||||| |||||||||||| ||   |||||||||||| ||||| |||||||||||||  ||||||||    
T  9383223 ttatgctatcaggttgctaacccatcaaaaattaaggatgaaaataacaaagggtgagtaggataagattagaaattggtttaatttatccgttcctatt 9383322  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    |||||||||||||| ||||| || ||||||| || |||  ||||||||| | |||||||||| | | ||||||||    
T  9383323 ggtgcaccaaacaatggatttaatcaggatgtgatagttttatcatatcttttctccctatcctatacaccaaac 9383397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 171 - 374
Target Start/End: Complemental strand, 6768466 - 6768259
Alignment:
Q  171 aatcaattttgaaataga-tcattggagagggtgggagtcgaaagagggt-tttgaagnnnnnnngatgcgcatgtg--ataatattatgctatcaggtt 266  Q
    |||| ||||||| ||||| | ||||||||||| ||||||||||||||||| |||||||       ||||||| ||||  ||  | |||||||||||||||    
T  6768466 aatcgattttgacatagaattattggagagggagggagtcgaaagagggtctttgaagaataaaagatgcgcgtgtgtgatgttgttatgctatcaggtt 6768367  T
Q  267 gttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaac 366  Q
      |||||||||||||| ||||||||||||||||||||  | ||||| ||| ||| ||||||| |||||||||||||||| |||||||| |||||||||||    
T  6768366 cctaacccaccaaaaattaaggataaaaataacaaaggttggatagaataggataggaaataagtttaatttatcattttctattggtacaccaaacaac 6768267  T
Q  367 ggattgaa 374  Q
     |||||||    
T  6768266 agattgaa 6768259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 250 - 431
Target Start/End: Original strand, 4076340 - 4076521
Alignment:
Q  250 tattatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttccta 349  Q
    |||||| ||||||||||  ||| |||||||||||||||||| | || ||||||||||  |||||||| |||| | ||||||||||||||||| |||||||    
T  4076340 tattatcctatcaggttcctaatccaccaaaaactaaggattagaaaaacaaagagtgaataggataggattagtaataggtttaatttatcctttccta 4076439  T
Q  350 ttggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggacc 431  Q
    ||| ||||||||||| | |||| ||  ||| |  || |||  ||||||||| | ||||| ||||||||||||||||| ||||    
T  4076440 ttgatgcaccaaacaccagattaaataagggtatgatagtgttatcatatcctatctccttatcatgtgcaccaaaccgacc 4076521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 269 - 364
Target Start/End: Original strand, 50004909 - 50005004
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaaca 364  Q
    ||||||||||||||||||||||||||||||||||| ||   ||||||| |||| ||||||||||||| ||||| |||  |||||||||||||||||    
T  50004909 taacccaccaaaaactaaggataaaaataacaaagggtgattaggataggattagaaataggtttaaattatccttttttattggtgcaccaaaca 50005004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 433
Target Start/End: Complemental strand, 4950292 - 4950129
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||| ||||  |||||| ||||||||| |||||| ||||||||||| |      
T  4950292 taacccaccaaaaacta-ggataaaaataacaaagggtaaataggatatgattgaaaatgagtttaaattatcattttctattgatgcaccaaacatcaa 4950194  T
Q  369 attgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccct 433  Q
    |||||| || ||| ||| |    ||||||||| | | | | ||||||||||||||||| ||||||    
T  4950193 attgaaacaagataggatatgtttatcatatcttattttcttatcatgtgcaccaaactgaccct 4950129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 428
Target Start/End: Original strand, 45792691 - 45792849
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    |||||||||||||||||||||||| ||| ||||||  |  |||||||| |||| |||| | ||| || ||||||||| || ||||||||||||| |||||    
T  45792691 taacccaccaaaaactaaggataagaattacaaaggctcaataggataggattagaaacatgttaaacttatcattttctgttggtgcaccaaa-aacgg 45792789  T
Q  369 attgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacgg 428  Q
    |||||  |||||| ||| | ||  |||||||||||||||| |||| ||  ||||||||||    
T  45792790 attgagtcaggataggatattctaatcatatcatgtctccttatcctgcacaccaaacgg 45792849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 42471969 - 42472057
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttat 340  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||    ||||||||||||  | |||||||||| |||||    
T  42471969 ttatgctatcaggttgttaacccaccaaaaactaaggattaaaattacaaagaagcaataggataagataagtaataggtttattttat 42472057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 12448986 - 12449060
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  12448986 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 12449060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 39555605 - 39555679
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||| ||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  39555605 taagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcatt 39555679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 49236280 - 49236173
Alignment:
Q  258 tatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgca 357  Q
    |||||||||| ||||||||||||||| |||||||  ||||| ||||  | | ||||||| ||   |||||| |||||||||||| ||| |||||||||||    
T  49236280 tatcaggttgctaacccaccaaaaaccaaggatatgaataagaaaggttgggtaggataggaaatgaaatatgtttaatttatccttttctattggtgca 49236181  T
Q  358 ccaaacaa 365  Q
    ||||||||    
T  49236180 ccaaacaa 49236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 2126180 - 2126106
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| | ||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  2126180 taagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 2126106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 11241169 - 11241095
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| ||||||||||| |||||||||||    
T  11241169 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcatt 11241095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 15959659 - 15959733
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||| |||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  15959659 taagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 15959733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 32624024 - 32624098
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||| ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  32624024 taagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 32624098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 7904256 - 7904161
Alignment:
Q  262 aggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgca 357  Q
    |||||| || |||||| |||||||||| || ||||||||||||||  |||||| |  ||||  ||||||||||||||||||| |||||||| ||||    
T  7904256 aggttgctagcccaccgaaaactaagggtagaaataacaaagagtgaataggagataattgataataggtttaatttatcatatcctattgatgca 7904161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 8002685 - 8002780
Alignment:
Q  262 aggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgca 357  Q
    |||||| || |||||| |||||||||| || ||||||||||||||  |||||| |  ||||  ||||||||||||||||||| |||||||| ||||    
T  8002685 aggttgctagcccaccgaaaactaagggtagaaataacaaagagtgaataggagataattgataataggtttaatttatcatatcctattgatgca 8002780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 42472062 - 42472164
Alignment:
Q  325 aataggtttaatttatcatttcctattggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaa 424  Q
    |||||||||| |||||||||||||| || |||||||||||||||||| ||| |||||  || |||  ||||||||  ||||| | |||| || |||||||    
T  42472062 aataggtttattttatcatttcctactgatgcaccaaacaacggatttaagtaggatatgacagtgttatcatattctgtcttcttatcctgcgcaccaa 42472161  T
Q  425 acg 427  Q
    |||    
T  42472162 acg 42472164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 3861718 - 3861788
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||| |||||| ||||||||||       ||||||| |||||||||||||||||||||||||    
T  3861718 aatttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcatt 3861788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 24190611 - 24190537
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||   ||||||||||||||||||||||    
T  24190611 taagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcatt 24190537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 28016765 - 28016839
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  |||||||||||| |||||||||||       ||||||||| |||||||||||||||||||||||    
T  28016765 taagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcatt 28016839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 43667322 - 43667396
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| ||||||| |||||||||||||||||       ||||||||| |||| ||||||||||||||||||    
T  43667322 taagaatttaaagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcatt 43667396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 46818521 - 46818595
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||| ||||||||       ||||||||| ||||| |||||||||||||||||    
T  46818521 taagaatttaaagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaattttcatt 46818595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 6786978 - 6786906
Alignment:
Q  435 agaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||| ||||||||||||||||||||||||       ||||||||  |||||||||| ||||||||||||    
T  6786978 agaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcatt 6786906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 325 - 428
Target Start/End: Original strand, 12855304 - 12855407
Alignment:
Q  325 aataggtttaatttatcatttcctattggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaa 424  Q
    |||||||||  | |||| ||||||||||||||| ||||||| ||||| ||  |||||  || | |  ||||||||| ||||||| |||||||||||||||    
T  12855304 aataggtttggtgtatcctttcctattggtgcatcaaacaatggatttaaataggatatgataatgatatcatatcctgtctccttatcatgtgcaccaa 12855403  T
Q  425 acgg 428  Q
    ||||    
T  12855404 acgg 12855407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 507
Target Start/End: Complemental strand, 6785587 - 6785524
Alignment:
Q  444 agtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||||||||       ||||||||  |||||||||||||||||||||||    
T  6785587 agtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcatt 6785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 508
Target Start/End: Original strand, 32742221 - 32742296
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatta 508  Q
    |||||||||  ||||||||||||||||||||||||       |||||||| ||| || ||||||||||||||||||    
T  32742221 taagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcatta 32742296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 503
Target Start/End: Complemental strand, 35691535 - 35691465
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| |||||| |||||||||||||||||       |||||||||  ||||||||||||||||||    
T  35691535 taagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttt 35691465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 52985075 - 52985001
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       |||| |  | |||||||||||||||||||||||    
T  52985075 taagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcatt 52985001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 25391823 - 25391750
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||| |||||||||||||||||       ||||||||  || ||||||||||||||||||||    
T  25391823 taagaatttgaagtataattttttgtgttttcttt-agataagttttatatgaaaatgtaaaaacaattttcatt 25391750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 507
Target Start/End: Original strand, 2246044 - 2246107
Alignment:
Q  444 agtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||||||||       ||||||||| || ||||||||| ||||||||||    
T  2246044 agtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcatt 2246107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 7467981 - 7468056
Alignment:
Q  433 taagaatttgaagta-tagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||| || |||||||||||||||||       |||||| || |||||||||| ||||||||||||    
T  7467981 taagaatttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcatt 7468056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Original strand, 13136573 - 13136607
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt 467  Q
    |||||||||| ||||||||||||||||||||||||    
T  13136573 taagaatttggagtatagttttttgtgttttcttt 13136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 43765433 - 43765362
Alignment:
Q  437 aatttgaagtatagtttttt-gtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||| |||||||||||       ||||||||| |||||||||||||| ||||||||    
T  43765433 aatttgtagtatagtttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcatt 43765362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 49288097 - 49288051
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaag 303  Q
    ||||||||||| ||||||| | |||||||||||| ||||||||||||    
T  49288097 ctatcaggttgctaacccaactaaaactaaggattaaaataacaaag 49288051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 3076437 - 3076363
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| || ||||||||||||||||| |||       ||||||| | |||||||||||| ||||||||||    
T  3076437 taagaatttgtagcatagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttcatt 3076363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 7902089 - 7902048
Alignment:
Q  261 caggttgttaacccaccaaaaactaaggataaaaataacaaa 302  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  7902089 caggttgctaacccaccaaaaactaagggtagaaataacaaa 7902048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 7905539 - 7905498
Alignment:
Q  261 caggttgttaacccaccaaaaactaaggataaaaataacaaa 302  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  7905539 caggttgctaacccaccaaaaactaagggtagaaataacaaa 7905498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 20018656 - 20018611
Alignment:
Q  325 aataggtttaatttatcatttcctattggtgcaccaaacaacggat 370  Q
    ||||||||||||||||||| || | |||||| ||||||||||||||    
T  20018656 aataggtttaatttatcatatcatgttggtgtaccaaacaacggat 20018611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 33431701 - 33431627
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| || ||||||||||||||||| |||       ||||||||| | |||| ||||||||||||||||    
T  33431701 taagaatttgtagcatagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcatt 33431627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 503
Target Start/End: Original strand, 39932591 - 39932661
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| |||||||||||||||||||| |||       ||||||||  ||||| |||||||||||||    
T  39932591 taagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttt 39932661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 40718816 - 40718746
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||||||       ||||||||  ||| |||| ||||||||||||||    
T  40718816 aatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcatt 40718746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 5950539 - 5950507
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  5950539 gttttataggaagatgtaaaaacaattttcatt 5950507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 8889758 - 8889790
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  8889758 gttttataggaagatgtaaaaacaattttcatt 8889790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 13351780 - 13351748
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  13351780 gttttataggaagatgtaaaaacaattttcatt 13351748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 15912298 - 15912266
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  15912298 gttttataggaagatgtaaaaacaattttcatt 15912266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 16688236 - 16688204
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  16688236 gttttataggaagatgtaaaaacaattttcatt 16688204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 47600100 - 47600132
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  47600100 gttttataggaagatgtaaaaacaattttcatt 47600132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 49288050 - 49288006
Alignment:
Q  318 gattggaaataggtttaatttatcatttcctattggtgcaccaaa 362  Q
    |||||| |||||||||| ||||||||||  |||||||||||||||    
T  49288050 gattggcaataggtttattttatcattttgtattggtgcaccaaa 49288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 252 - 426
Target Start/End: Complemental strand, 6457717 - 6457543
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    ||||||||| ||||  ||||||||||||||| |||||||||||||||||||| || |||| |||| |||||||||| | ||||||||||||||| |||||    
T  6457717 ttatgctattaggtaattaacccaccaaaaattaaggataaaaataacaaagggtggataagatatgattggaaattgatttaatttatcattttctatt 6457618  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    ||||||||||||||| ||||||| || |||  || ||| |||||||||| |||||| ||||||||||||||||||    
T  6457617 ggtgcaccaaacaacagattgaatcatgatatgatagttctatcatatcctgtctctctatcatgtgcaccaaac 6457543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 252 - 427
Target Start/End: Complemental strand, 40626588 - 40626413
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||   ||||||| |||| ||||||  ||||| ||||| |||||||||    
T  40626588 ttatgctatcaggttgttaacccaccaaaatttaaggataaaaataataaagggtgagtaggataggattagaaatatatttaaattatcctttcctatt 40626489  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacg 427  Q
    ||||||||||||| | ||||||| || |||  || |||  ||||||||| ||||| |||||||||||||| |||||    
T  40626488 ggtgcaccaaacagcagattgaatcaagatatgatagttttatcatatcctgtcttcctatcatgtgcacgaaacg 40626413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 252 - 427
Target Start/End: Original strand, 40054459 - 40054634
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||| |||| |||||| ||||||| | |||||||||||| ||||||||||||  | ||||||||| ||||   |||||||||| |||||||||| |||||    
T  40054459 ttatcctattaggttgctaacccagctaaaactaaggattaaaataacaaaggattgataggataggattaacaataggtttagtttatcattttctatt 40054558  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacg 427  Q
    ||||||||||||||  |||| ||  |||||   | |||  ||||||||||||||||  ||||||| ||| ||||||    
T  40054559 ggtgcaccaaacaagagatttaaataggatataatagtgttatcatatcatgtctcgttatcatgcgcatcaaacg 40054634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 6452581 - 6452409
Alignment:
Q  253 tatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattg 352  Q
    |||||||| |||||  ||||||| |||||||||||||| | ||| |||||| ||  ||||||||||||| | ||||||||||||||||||| || |||||    
T  6452581 tatgctataaggtttctaacccaacaaaaactaaggattagaattacaaagcgtgaataggataagattagtaataggtttaatttatcatatcttattg 6452482  T
Q  353 gtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    ||||| ||||| | ||||| ||   |||| ||| | |  ||||||||| ||||| ||||||||| |||||||||    
T  6452481 gtgcatcaaaccatggatttaaattggataggataattttatcatatcctgtct-cctatcatgcgcaccaaac 6452409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 3201468 - 3201394
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  3201468 taagaatttaaagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcatt 3201394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 41528398 - 41528324
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||    
T  41528398 taagaatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattttcatt 41528324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 43415543 - 43415469
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||| |||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  43415543 taagaatttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcatt 43415469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 433 - 509
Target Start/End: Complemental strand, 45085399 - 45085323
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcattag 509  Q
    |||||||||| ||||||||||||||| ||||||||       ||||||||| |||||||||||||||||||||||||    
T  45085399 taagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcattag 45085323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 366
Target Start/End: Complemental strand, 18665262 - 18665165
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaac 366  Q
    |||||||||||||| ||||||||||| |||||||| ||   || ||||  ||| ||||||||||||| ||||| |||||| ||||||||| |||||||    
T  18665262 taacccaccaaaaattaaggataaaattaacaaagggtgagtaagatattattagaaataggtttaagttatcctttccttttggtgcacgaaacaac 18665165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 45660503 - 45660433
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  45660503 aatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 45660433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 269 - 369
Target Start/End: Complemental strand, 5256479 - 5256379
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    ||||||| | ||||| |||||||||||||||||||||   |||||||| ||||   || | ||||||||||||||||||||  ||||||||||||| |||    
T  5256479 taacccagctaaaacaaaggataaaaataacaaagagccaataggataggattaacaacaagtttaatttatcatttcctaccggtgcaccaaacagcgg 5256380  T
Q  369 a 369  Q
    |    
T  5256379 a 5256379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 7670479 - 7670385
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaac 363  Q
    |||||||||||||| ||||||||| ||| |||||   |  |||||||| |||| |||| ||||| || ||||||||| |||||||||||||||||    
T  7670479 taacccaccaaaaattaaggataagaattacaaaagctcaataggataggattagaaacaggttaaacttatcattttctattggtgcaccaaac 7670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 16567724 - 16567825
Alignment:
Q  270 aacccaccaaaaactaaggataaaaataacaaag-agtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    |||||||||||||||| |||||| |||||||||| || ||  || ||| |||| |||||||||| || ||||| ||| || |||||||||||||||||||    
T  16567724 aacccaccaaaaactatggataagaataacaaaggaggagtgag-ataggattagaaataggttaaacttatccttttctgttggtgcaccaaacaacgg 16567822  T
Q  369 att 371  Q
    |||    
T  16567823 att 16567825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 35115821 - 35115896
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnn-gttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||    
T  35115821 taagaatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattttcatt 35115896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 6110217 - 6110291
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||| |||||||||||||||        ||||||||| |||||||||||||||||||||||    
T  6110217 taagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcatt 6110291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 11617166 - 11617092
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||||||||| || ||||||||       ||||||||| |||||||||||||||||||||||    
T  11617166 taagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 11617092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 14874105 - 14874031
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||| |||| ||||||||||||||||||||||||       ||||||||| |||||||||||| ||||||||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcatt 14874031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 19264242 - 19264168
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  |||||| |||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  19264242 taagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 19264168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 28599166 - 28599240
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       | ||||||| |||||||||||| ||||||||||    
T  28599166 taagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcatt 28599240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 35517265 - 35517191
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       |||||||||  ||||||||||| ||||||||||    
T  35517265 taagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcatt 35517191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 507
Target Start/End: Complemental strand, 28858436 - 28858377
Alignment:
Q  448 tagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||||       |||||||||||||||||||||| ||||||||||    
T  28858436 tagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcatt 28858377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 12938384 - 12938310
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||||||||||||| |||||||       ||||||||| ||  |||||||||||||||||||    
T  12938384 taagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcatt 12938310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 503
Target Start/End: Original strand, 33198649 - 33198719
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| | | ||||||||||||||||||||       ||||||||| |||||||||||||||||||    
T  33198649 taagaatttggactctagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaatttt 33198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 33677621 - 33677551
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||| |||||| |||       ||||||||| |||||||||||||||||||||||    
T  33677621 aatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcatt 33677551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 507
Target Start/End: Original strand, 24204545 - 24204621
Alignment:
Q  431 cctaagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||| |||||| ||| |||||||||||||       ||||||||| || |||||||| |||||||||||    
T  24204545 cctaagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcatt 24204621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 26998445 - 26998385
Alignment:
Q  447 atagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||| |||||       ||||||||| |||||||||||||||||||||||    
T  26998445 atagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcatt 26998385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 16494986 - 16495018
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  16494986 gttttataggaagatgtaaaaacaattttcatt 16495018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 32010231 - 32010170
Alignment:
Q  446 tatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||| |||||       ||||||||| |||||||||||| ||||||||||    
T  32010231 tatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcatt 32010170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 255 - 428
Target Start/End: Original strand, 41482419 - 41482592
Alignment:
Q  255 tgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggt 354  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||   ||||||| ||||  |||||||||||| ||||| |||||| |||||    
T  41482419 tgctatcaggttgctaacccaccaaaaactaaggataaaaataacaaagggtgagtaggatatgattaaaaataggtttaagttatcctttcctgttggt 41482518  T
Q  355 gcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacgg 428  Q
    |||||||||| || ||| || |||||   || |||  |||| |||||||||| |||||||||||||||||||||    
T  41482519 gcaccaaacagcgcattaaatcaggagatgatagttttatcctatcatgtcttcctatcatgtgcaccaaacgg 41482592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 435
Target Start/End: Complemental strand, 39594747 - 39594573
Alignment:
Q  259 atcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcac 358  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||  |  ||| ||||||||| | ||||||||||||||| ||| || |||||||||||    
T  39594747 atcatgttgctaacccatcaaaaactaaggataaaaattacaaaggatgaatatgataagattagtaataggtttaatttagcatatcttattggtgcac 39594648  T
Q  359 caaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccctaa 435  Q
    ||||||||||||| ||| |||||  || |||  |||||||||   |||| ||||  ||||||||||||| |||||||    
T  39594647 caaacaacggatttaagtaggatatgatagttttatcatatc--ctctctctattctgtgcaccaaacgaaccctaa 39594573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 252 - 433
Target Start/End: Complemental strand, 24429809 - 24429627
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||   || |||| ||||  |||||| ||||| ||||||||| |||||    
T  24429809 ttatgctatcaggttgctaacccaccaaaaactaaggataaaaataacaaagggtgagtaagataggattataaatagttttaaattatcattttctatt 24429710  T
Q  352 ggtgcaccaaacaacggattgaagcaggat-gggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccct 433  Q
    |||||| ||| || | || |||| ||||||   || |||  ||||||||   |||| |||||| |||||||||||| ||||||    
T  24429709 ggtgcatcaagcagcagaatgaatcaggataatgatagttttatcatatttcgtcttcctatcttgtgcaccaaacagaccct 24429627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 2333983 - 2334168
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||||||||| ||||| ||||| ||||||||| |  |||||||||||||||  ||  |||||||| ||||  |||||||||||| |||||   |||||||    
T  2333983 ttatgctatc-ggttgctaaccaaccaaaaaccagagataaaaataacaaaaggtgaataggataggattaaaaataggtttaagttatccaatcctatt 2334081  T
Q  352 ggtgcaccaaacaacggattgaa---gcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccctaa 435  Q
    ||||||||||||| |||||||||    ||||||  || |||  ||||||||||||||||| ||||||| ||| |||||||| |||||    
T  2334082 ggtgcaccaaacaccggattgaatattcaggatatgatagtgttatcatatcatgtctccttatcatgcgcatcaaacggatcctaa 2334168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 269 - 426
Target Start/End: Complemental strand, 39645006 - 39644849
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    |||||||||||||||||||||||||||||||||||  |   ||||||| ||||  |||| ||||||| ||||| ||| ||||||| ||||||||||||      
T  39645006 taacccaccaaaaactaaggataaaaataacaaaggatgagtaggataggattataaatgggtttaagttatccttttctattggcgcaccaaacaacaa 39644907  T
Q  369 attgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    ||||||  | |||  || |||  ||||||||| ||||| ||||||| |||||||||||    
T  39644906 attgaaatatgatatgatagttttatcatatcctgtcttcctatcacgtgcaccaaac 39644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 436
Target Start/End: Original strand, 23318951 - 23319118
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    ||||||| ||||||| |||||||||||| ||||||  |  |||||||| ||||  |||||||||||| ||||| |||| | |||||| |||||||||| |    
T  23318951 taacccatcaaaaaccaaggataaaaattacaaaggctcaataggataggattaaaaataggtttaaattatcctttcatgttggtggaccaaacaacag 23319050  T
Q  369 attgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccctaag 436  Q
    ||| || ||||||  || |||  ||||||||| ||||| | ||||||| | ||||| |||||| ||||    
T  23319051 atttaatcaggatatgatagtgttatcatatcctgtcttcttatcatgcgtaccaagcggaccgtaag 23319118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 430
Target Start/End: Original strand, 45884641 - 45884815
Alignment:
Q  255 tgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggt 354  Q
    |||| |||| |||||||||| ||||||||| |||||||||||||||||||| || ||||||| ||||  |||| | ||||| |||||  ||| || ||||    
T  45884641 tgctttcagattgttaacccgccaaaaacttaggataaaaataacaaagaggag-taggatatgattaaaaatggttttaaattatccattcatactggt 45884739  T
Q  355 gcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggac 430  Q
    |||| |||||||  |||||| || |||  || | |  ||||||||| ||| | ||||||||||||||| |||||||    
T  45884740 gcactaaacaacatattgaatcaagatatgataattttatcatatcctgttttcctatcatgtgcaccgaacggac 45884815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 6191187 - 6191113
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  6191187 taagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcatt 6191113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 46760275 - 46760349
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  46760275 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 46760349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 10026535 - 10026437
Alignment:
Q  273 ccaccaaaaactaaggataaaaataacaaag-agtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacggatt 371  Q
    |||||||||||||||||||| |||||||||| || || | ||||| |||| |||||||||| || |||||||||| | |||||||||||||||| |||||    
T  10026535 ccaccaaaaactaaggataagaataacaaaggaggag-tgggatatgattagaaataggttaaacttatcatttcatgttggtgcaccaaacaagggatt 10026437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 18102672 - 18102598
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||| |||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  18102672 taagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 18102598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 19912787 - 19912861
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| || ||||||||||||||||||||    
T  19912787 taagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcatt 19912861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 20123698 - 20123772
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||| ||||||       ||||||||| |||||||||||||||||||||||    
T  20123698 taagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcatt 20123772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 371
Target Start/End: Complemental strand, 44107819 - 44107776
Alignment:
Q  328 aggtttaatttatcatttcctattggtgcaccaaacaacggatt 371  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  44107819 aggtttaatttatcatttcctattggtgcaccaaacaaaggatt 44107776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 12632362 - 12632436
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||| ||||||||||       |||| |||| |||||||||||||||||||||||    
T  12632362 taagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcatt 12632436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 25944718 - 25944644
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||  ||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  25944718 taagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 25944644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 35923389 - 35923320
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| |||||||||||| |||||||||||       |||||||||||||||||||||||||||||||||    
T  35923389 aatttggagtatagttttt-gtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcatt 35923320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 45486093 - 45486023
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||||||       ||||||||| |||||||||||| ||||||||||    
T  45486093 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcatt 45486023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 14806011 - 14805938
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||| ||||||||       ||||||||| |||||||||||||||||||||||    
T  14806011 taagaatttggagtatagttttttgtattttctttgaaaaa-gttttataggaagatgtaaaaacaattttcatt 14805938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 15253005 - 15252932
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||| ||||||||       ||||||||| |||||||||||||||||||||||    
T  15253005 taagaatttggagtatagttttttgtattttctttgaaaaa-gttttataggaagatgtaaaaacaattttcatt 15252932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 4910653 - 4910725
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||  ||||||||||||||||       ||||||||| |||||||||||| ||||||||||    
T  4910653 taagaatttgaagtata--tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattttcatt 4910725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 507
Target Start/End: Original strand, 25737657 - 25737719
Alignment:
Q  445 gtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||       ||||||||| |||||||||||||||||||||||    
T  25737657 gtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 25737719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 10248628 - 10248596
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||||||||||||    
T  10248628 gttttatagaaagatgtaaaaacaattttcatt 10248596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 24799514 - 24799451
Alignment:
Q  308 gataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacggatt 371  Q
    ||||||||| |||| |||||||  ||||||||| || |  ||||||||||||||||||||||||    
T  24799514 gataggataggattagaaatagaattaatttattatattatattggtgcaccaaacaacggatt 24799451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 47038596 - 47038533
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtt 332  Q
    |||||||||||||||||| ||||||| |||||||| || | || |||| |||| ||||||||||    
T  47038596 taacccaccaaaaactaaagataaaagtaacaaagggtgggtacgatatgattagaaataggtt 47038533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 466
Target Start/End: Complemental strand, 14574706 - 14574673
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctt 466  Q
    |||||||||| |||||||||||||||||||||||    
T  14574706 taagaatttggagtatagttttttgtgttttctt 14574673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 509
Target Start/End: Original strand, 35068885 - 35068943
Alignment:
Q  451 ttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcattag 509  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||| |||||    
T  35068885 ttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattag 35068943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 509
Target Start/End: Original strand, 35888030 - 35888063
Alignment:
Q  476 ttttatagaaagatgtaaaaacaattttcattag 509  Q
    |||||||| |||||||||||||||||||||||||    
T  35888030 ttttataggaagatgtaaaaacaattttcattag 35888063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 4069103 - 4069071
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||| ||||||||||    
T  4069103 gttttatagaaagatgtaaaaagaattttcatt 4069071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 31769022 - 31769054
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  31769022 gttttataggaagatgtaaaaacaattttcatt 31769054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 44335142 - 44335070
Alignment:
Q  292 aaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaaca 364  Q
    ||||||||||||||||||||||||| |||    |||  |||||| ||||| ||| ||||||||||| ||||||    
T  44335142 aaaataacaaagagtagataggataggataaataatgagtttaaattatccttttctattggtgcaacaaaca 44335070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 45980471 - 45980503
Alignment:
Q  271 acccaccaaaaactaaggataaaaataacaaag 303  Q
    |||||||||||| ||||||||||||||||||||    
T  45980471 acccaccaaaaagtaaggataaaaataacaaag 45980503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 40417075 - 40416886
Alignment:
Q  244 tgataatattatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcat 343  Q
    ||||||| || ||||||||||||| ||||| | ||||||| |||||||| ||||| |||| || | ||||||| ||||  |||||  |||||||||||||    
T  40417075 tgataattttgtgctatcaggttgctaaccaaacaaaaaccaaggataagaataataaagggttggtaggataggattaaaaatatatttaatttatcat 40416976  T
Q  344 ttcctattggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccct 433  Q
    || || ||| ||||||||||||||||||||||||||||  || |||  | ||||||| ||||| |||||||||||| | |||| ||||||    
T  40416975 tttctgttgatgcaccaaacaacggattgaagcaggatatgatagttttttcatatcctgtcttcctatcatgtgctctaaacagaccct 40416886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 279 - 426
Target Start/End: Original strand, 48936324 - 48936469
Alignment:
Q  279 aaaactaaggataaaaataacaaag-agtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacggattgaagca 377  Q
    ||||||||||||||||||||||||| || || ||||||| ||||  ||| |||||||| |||||  ||||| ||||||||||||||||||||||||| ||    
T  48936324 aaaactaaggataaaaataacaaaggagaag-taggataggattaaaaacaggtttaaattatc--ttcctgttggtgcaccaaacaacggattgaaaca 48936420  T
Q  378 ggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    ||||  || |||| ||||||||| ||||| |||||| | ||||||||||    
T  48936421 ggatatgatagtcttatcatatcctgtcttcctatcctatgcaccaaac 48936469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 435
Target Start/End: Original strand, 45818598 - 45818781
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    ||||||||||| ||||  ||| |||||||||||||||||||||| |||||||| |  ||  |||| |||    |||||||||| |||||| ||| ||| |    
T  45818598 ttatgctatcaagttgccaactcaccaaaaactaaggataaaaacaacaaagaatgaatgagataggataaacaataggtttattttatcttttgctact 45818697  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccctaa 435  Q
    | |||||||||||||||||| ||| |||||  || |||  ||||||||| ||||| | |||| |  ||||||||||||||||||    
T  45818698 gatgcaccaaacaacggatttaagtaggatatgatagtgttatcatatcctgtcttcttatccttcgcaccaaacggaccctaa 45818781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 433
Target Start/End: Complemental strand, 32491022 - 32490841
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||| ||||||||||| ||||||| | |||||||||||| ||||||||||||  | |||||||||  ||| | |||||||||   ||||| |||| ||||    
T  32491022 ttatcctatcaggttgctaacccagctaaaactaaggattaaaataacaaaggattgataggatagaattagcaataggtttcgattatcctttcatatt 32490923  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggaccct 433  Q
    |||||||||||||| ||||| ||  || ||  || |||  ||||||||| ||||||  |||| || ||||||||||| ||||    
T  32490922 ggtgcaccaaacaaaggatttaaatagaatatgatagtgttatcatatcctgtctctttatcctgcgcaccaaacggtccct 32490841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 20524966 - 20524860
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgc 356  Q
    |||||| |||||||||||||||||||  |||||| ||||| ||||||  ||||||||||| ||||   ||| ||||||||||||| | || |||||||||    
T  20524966 ctatcaagttgttaacccaccaaaaatcaaggattaaaattacaaaggatagataggatatgattactaatgggtttaatttatcgtatcatattggtgc 20524867  T
Q  357 accaaac 363  Q
    |||||||    
T  20524866 accaaac 20524860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 30189717 - 30189643
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  30189717 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 30189643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 50651015 - 50651089
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||| ||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  50651015 taagaatttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcatt 50651089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 366
Target Start/End: Complemental strand, 51976302 - 51976193
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgc 356  Q
    |||||||||||||||||||||||||   |||||| | || ||||||  ||  ||||||||||||| |||||||  |||  ||||||||| ||||||||||    
T  51976302 ctatcaggttgttaacccaccaaaattcaaggattagaaaaacaaatggtgaataggataagattagaaatagccttagcttatcattttctattggtgc 51976203  T
Q  357 accaaacaac 366  Q
    ||||||||||    
T  51976202 accaaacaac 51976193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 350
Target Start/End: Complemental strand, 43545532 - 43545434
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctat 350  Q
    |||||| ||| | ||| |||||||||||||||||| || |||||||||||||| | ||||| |||||| | || | |||||||| ||||||||||||||    
T  43545532 ttatgccatcggattgctaacccaccaaaaactaatgagaaaaataacaaagaatggatagaataagactagagacaggtttaagttatcatttcctat 43545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 6438229 - 6438155
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       | ||||||| |||||||||||||||||||||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcatt 6438155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 37075106 - 37075032
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||| |||||||||||||||||       ||||||||| |||||||||| ||||||||||||    
T  37075106 taagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcatt 37075032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 41476318 - 41476388
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||    
T  41476318 aatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcatt 41476388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 426
Target Start/End: Original strand, 39795314 - 39795409
Alignment:
Q  331 tttaatttatcatttcctattggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    ||||||||||||| | ||||||||||||||||||||  ||| ||| |||||  || |||  |||||||||||||||| ||||| || |||||||||    
T  39795314 tttaatttatcatattctattggtgcaccaaacaacatatttaagtaggatatgatagtgttatcatatcatgtctctctatcctgcgcaccaaac 39795409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 253 - 431
Target Start/End: Complemental strand, 7038722 - 7038544
Alignment:
Q  253 tatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattg 352  Q
    |||||||||| |||| ||||||| |||||| ||||||| | ||| |||||   |  ||| |||| |||| | ||||||||||||||||||| |||||||     
T  7038722 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattagtaataggtttaatttatcatatcctatta 7038623  T
Q  353 gtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaacggacc 431  Q
    ||| |||||| || ||||| ||  |||||  || | |  |||||||||| ||||| |||||||| ||| ||||| ||||    
T  7038622 gtgtaccaaataatggatttaaataggataagataattttatcatatcaggtctctctatcatgcgcatcaaacagacc 7038544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 37042399 - 37042469
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||| ||       ||||||||| |||||||||||||||||||||||    
T  37042399 aatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcatt 37042469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 46711636 - 46711710
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||| |||||||||||||||||       ||||||||| |||||||||||||||| ||||||    
T  46711636 taagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcatt 46711710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 53270381 - 53270307
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       |||| ||||||||||| ||||| ||||||||||    
T  53270381 taagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcatt 53270307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 45850751 - 45850802
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaag 303  Q
    |||||||||||||||| ||||||||||||||  |||||||| ||||||||||    
T  45850751 ttatgctatcaggttgctaacccaccaaaaatcaaggataagaataacaaag 45850802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 47864335 - 47864263
Alignment:
Q  435 agaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||| ||||||||||||||  ||||||||       ||||||||| |||||||||||||||||||||||    
T  47864335 agaatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 47864263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 507
Target Start/End: Complemental strand, 9264686 - 9264623
Alignment:
Q  444 agtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||||||||       ||||||||  |||||||||||||||||||||||    
T  9264686 agtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttcatt 9264623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 11054289 - 11054364
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt-nnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||        ||||||||| ||||| |||||||||||||||||    
T  11054289 taagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcatt 11054364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 507
Target Start/End: Original strand, 23311582 - 23311645
Alignment:
Q  444 agtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||| ||||||||||||       ||||||||| |||||||||||||||||||||||    
T  23311582 agtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 23311645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 23910491 - 23910565
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  ||||||| ||||||||||||||||       ||||||||| |||||||||||| ||||||||||    
T  23910491 taagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcatt 23910565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 26724969 - 26725043
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||| |||||||||||||||||       ||||| |   |||||||||||||||||||||||    
T  26724969 taagaatttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttcatt 26725043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 28875552 - 28875478
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| | ||||||| ||||||||||||||       ||||||||  |||||||||||||||||||||||    
T  28875552 taagaatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcatt 28875478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 503
Target Start/End: Complemental strand, 35963298 - 35963228
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| |||||||||||||||||||| |||       ||||||||| |||||| ||||||||||||    
T  35963298 taagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttt 35963228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 426
Target Start/End: Complemental strand, 38457844 - 38457678
Alignment:
Q  264 gttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttc----ctattggtgcacc 359  Q
    |||| |||||||||||| ||||||||||||| |||||||  ||  |||||||| |||| |||||  |||||| ||||| ||||     ||||| ||||||    
T  38457844 gttgctaacccaccaaatactaaggataaaagtaacaaaaggtgaataggataggattagaaatgagtttaaattatcctttcttatgtattgatgcacc 38457745  T
Q  360 aaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaac 426  Q
    ||||  |||||||||  | ||| | | |||  ||||||||||||||| | || ||| ||||||||||    
T  38457744 aaacggcggattgaaataagatagtatagttttatcatatcatgtcttcttaacatatgcaccaaac 38457678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 21214339 - 21214307
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||||||||||||    
T  21214339 gttttatagaaagatgtaaaaacaattttcatt 21214307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 507
Target Start/End: Original strand, 7886638 - 7886669
Alignment:
Q  476 ttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||||||||||||||||    
T  7886638 ttttatagaaagatgtaaaaacaattttcatt 7886669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 366
Target Start/End: Original strand, 32794879 - 32794993
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    ||||| |||||  ||||||| ||||||||||||||  |||||||||||||||| |   |||||  | ||| ||||||  ||||| |||||||||  ||||    
T  32794879 ttatgttatcaaattgttaatccaccaaaaactaactataaaaataacaaagaatgagtaggaacaaattagaaataaatttaaattatcattttttatt 32794978  T
Q  352 ggtgcaccaaacaac 366  Q
     ||||||||| ||||    
T  32794979 agtgcaccaaccaac 32794993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Original strand, 54464874 - 54464908
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt 467  Q
    ||||||||||||||||| |||||||||||||||||    
T  54464874 taagaatttgaagtataattttttgtgttttcttt 54464908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 7866461 - 7866535
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  ||||||||||||| | ||||||||       ||||||||  |||||||||||||||||||||||    
T  7866461 taagaatttagagtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttcatt 7866535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 29235333 - 29235259
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  ||||||||||||||| ||||||||       |||| |||| |||||||||||| ||||||||||    
T  29235333 taagaatttagagtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttcatt 29235259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 31837065 - 31836991
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||| ||||||||||||||| ||||||||       ||||||||| || ||| ||||||||||||||||    
T  31837065 taagaagttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattttcatt 31836991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 579133 - 579190
Alignment:
Q  450 gttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||       ||||||||| ||||| |||||||||||||||||    
T  579133 gttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcatt 579190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 10014367 - 10014335
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  10014367 gttttataggaagatgtaaaaacaattttcatt 10014335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 10115009 - 10114977
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  10115009 gttttataggaagatgtaaaaacaattttcatt 10114977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 10252109 - 10252077
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  10252109 gttttataggaagatgtaaaaacaattttcatt 10252077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 16033007 - 16033039
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  16033007 gttttataggaagatgtaaaaacaattttcatt 16033039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 19464208 - 19464147
Alignment:
Q  446 tatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||||||       ||||||||| |||||  ||||||||||||||||    
T  19464208 tatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttcatt 19464147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 504
Target Start/End: Original strand, 25242170 - 25242227
Alignment:
Q  447 atagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttc 504  Q
    ||||||||||||||| |||||       |||||||||||||||| |||||||||||||    
T  25242170 atagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaattttc 25242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 503
Target Start/End: Original strand, 30454745 - 30454773
Alignment:
Q  475 gttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||||||||||||||||||||||    
T  30454745 gttttatagaaagatgtaaaaacaatttt 30454773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 34194986 - 34194954
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  34194986 gttttataggaagatgtaaaaacaattttcatt 34194954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 54725630 - 54725662
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  54725630 gttttataggaagatgtaaaaacaattttcatt 54725662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 374
Target Start/End: Original strand, 8547436 - 8547553
Alignment:
Q  257 ctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgc 356  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||||| ||  ||| ||||||||| ||||||||||||| ||||| |||||||||| |||    
T  8547436 ctatcatgttgctaacccaccaaaaactaagtataaaaataacaaagggtgaatatgataagattagaaataggtttaagttatcctttcctattgatgc 8547535  T
Q  357 accaaacaacggattgaa 374  Q
     ||||||  |||||||||    
T  8547536 tccaaacggcggattgaa 8547553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 8573796 - 8573913
Alignment:
Q  264 gttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaac 363  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||  ||| ||||||||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  8573796 gttgctaacccaccaaaaactaagtataaaaataacaaagggtgaatatgataagattagaaataggtttaagttatcatttcctattgatgctccaaac 8573895  T
Q  364 aacggattgaagcaggat 381  Q
       |||||||| ||||||    
T  8573896 ggaggattgaaacaggat 8573913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 11082264 - 11082338
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       |||||||||  ||||||||||||||||||||||    
T  11082264 taagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcatt 11082338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 503
Target Start/End: Complemental strand, 21542560 - 21542490
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||    
T  21542560 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 21542490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 425
Target Start/End: Original strand, 12771875 - 12772038
Alignment:
Q  262 aggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaa 361  Q
    |||||| ||||||| |  ||||||||||| |||| ||||||||||  ||||||||||||    || |||||| |||| |||| || ||||| ||||||||    
T  12771875 aggttgctaacccagcctaaactaaggattaaaaaaacaaagagtttataggataagataaataaaaggtttgatttctcatatcatattgctgcaccaa 12771974  T
Q  362 acaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaa 425  Q
    |||| ||||| ||  | |||  || ||   |||||||||||||||| |||||||| ||||||||    
T  12771975 acaaaggatttaaatacgataagatagagttatcatatcatgtctctctatcatgcgcaccaaa 12772038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 14227943 - 14228045
Alignment:
Q  325 aataggtttaatttatcatttcctattggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaa 424  Q
    ||||||||||| |||||||||||||| ||  | |||||||||||||||||  |||||  || |||  ||||||||||||||| | |||| | ||||||||    
T  14227943 aataggtttaagttatcatttcctatcggcactccaaacaacggattgaaataggataagatagttttatcatatcatgtcttcttatcctatgcaccaa 14228042  T
Q  425 acg 427  Q
    |||    
T  14228043 acg 14228045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 35129073 - 35129148
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaa-aaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| ||||||||| ||||||||||||||    
T  35129073 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttcatt 35129148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 507
Target Start/End: Original strand, 3095743 - 3095812
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  3095743 aatttggagtatagttttttgtgttttctttggaaaa-gttttataggaagatgtaaaaacaattttcatt 3095812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 16342710 - 16342752
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaa 294  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  16342710 ttatgctatcaggttgctaacccaccaaaaattaaggataaaa 16342752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 18596636 - 18596718
Alignment:
Q  264 gttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttc 346  Q
    |||| |||||||||||||||||||||||||| ||| |||| || | || || | ||||  |||||||||||| ||||||||||    
T  18596636 gttgctaacccaccaaaaactaaggataaaagtaataaagggttggtatgaaaggattaaaaataggtttaaattatcatttc 18596718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 30794211 - 30794285
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||| |||||| |||||| |||       ||||||||| |||||||||||||| ||||||||    
T  30794211 taagaatttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttcatt 30794285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 507
Target Start/End: Original strand, 12461491 - 12461522
Alignment:
Q  476 ttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||||||||||||||||||||    
T  12461491 ttttatagaaagatgtaaaaacaattttcatt 12461522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 16524505 - 16524445
Alignment:
Q  447 atagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||||||||| |||||       ||||||||| |||||||||||||||||||||||    
T  16524505 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 16524445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 129102 - 129204
Alignment:
Q  259 atcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcac 358  Q
    |||| |||| || |||| |||||||||| |||||||||||||||| ||  ||| |||| ||||  ||||  |||||| ||||  |||||||||| |||||    
T  129102 atcatgttgctagcccatcaaaaactaaagataaaaataacaaagggtgaatatgataggattaaaaatgagtttaagttattttttcctattgatgcac 129201  T
Q  359 caa 361  Q
    |||    
T  129202 caa 129204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Original strand, 17751763 - 17751797
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt 467  Q
    |||||||||| ||||||||||||||||||||||||    
T  17751763 taagaatttggagtatagttttttgtgttttcttt 17751797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 5300661 - 5300693
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  5300661 gttttataggaagatgtaaaaacaattttcatt 5300693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 16013493 - 16013525
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  16013493 gttttataggaagatgtaaaaacaattttcatt 16013525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 425
Target Start/End: Complemental strand, 34731388 - 34731215
Alignment:
Q  252 ttatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctatt 351  Q
    |||| ||||||||||| ||||||| | |||||||||||| ||||||||||||  | ||||||||| ||||   |||||||||| |||||| |||||||||    
T  34731388 ttatcctatcaggttgctaacccagctaaaactaaggattaaaataacaaaggattgataggataggattaacaataggtttagtttatcctttcctatt 34731289  T
Q  352 ggtgcaccaaacaacggattgaagcaggatgggaaagtcctatcatatcatgtctccctatcatgtgcaccaaa 425  Q
    |||||||||||||| ||||| ||  |||||  || |||  ||||||||| | ||||  ||||||| ||||||||    
T  34731288 ggtgcaccaaacaagggatttaaataggatatgatagtgttatcatatcctatctctttatcatgcgcaccaaa 34731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 13109811 - 13109709
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||| |||||| ||| || ||||||||| |||| || ||||||||||| ||    
T  13109811 taacccaccaaaaactaaggataaaaataacaaagggtggataggatatgattagaaatatgttaaacttatcattttctatgggcgcaccaaacaatgg 13109712  T
Q  369 att 371  Q
    |||    
T  13109711 att 13109709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 13039817 - 13039715
Alignment:
Q  269 taacccaccaaaaactaaggataaaaataacaaagagtagataggataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacgg 368  Q
    |||||||||||||||||||||||||||||| ||||  | |||||||||  ||| |||||| ||| || |||||||||||||| || ||||||||||| ||    
T  13039817 taacccaccaaaaactaaggataaaaataataaaggatggataggatataattagaaatatgttaaacttatcatttcctatgggcgcaccaaacaatgg 13039718  T
Q  369 att 371  Q
    |||    
T  13039717 att 13039715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 34425472 - 34425398
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||||||||||||||       ||||||||| || ||||||||||||||||||||    
T  34425472 taagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcatt 34425398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 5984127 - 5984201
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  ||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||    
T  5984127 taagaatttagagtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcatt 5984201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 20644156 - 20644082
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||| |||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  20644156 taagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 20644082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 37522608 - 37522682
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||||||||||||||||| |||       ||||||||| |||||||||||||||||||||||    
T  37522608 taagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcatt 37522682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 42273789 - 42273715
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||  |||||||||||||||||||||||    
T  42273789 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcatt 42273715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 43589981 - 43590055
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       |||||||||  ||||||||||||||||||||||    
T  43589981 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcatt 43590055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 11261905 - 11261977
Alignment:
Q  435 agaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||| |||||| |||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  11261905 agaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcatt 11261977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 6686527 - 6686452
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt-nnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||    
T  6686527 taagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttcatt 6686452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 19413283 - 19413209
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| || |||||||||||||||||||||       ||||||| | |||||||||||||||||||||||    
T  19413283 taagaatttgtagcatagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcatt 19413209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 43454342 - 43454416
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| ||||| ||||||||||||||||||||||       ||||||||| || ||||||||||||||||||||    
T  43454342 taagaacttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcatt 43454416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 37562780 - 37562857
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnn-gttttatagaaagatgtaaaaacaattttcattag 509  Q
    |||||||||| |||||||||||||||||||| |||        ||||||||| |||||||||||||||||||||||||    
T  37562780 taagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttcattag 37562857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 509
Target Start/End: Original strand, 104275 - 104309
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcattag 509  Q
    |||||||||||||||||||||||||||||||||||    
T  104275 gttttatagaaagatgtaaaaacaattttcattag 104309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 503
Target Start/End: Complemental strand, 20039244 - 20039174
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaatttt 503  Q
    |||||||||| |||||| |||||||||||||||||       ||||||||| ||||||||||| |||||||    
T  20039244 taagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttt 20039174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 32111144 - 32111070
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| |||||| | |||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcatt 32111070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 8506531 - 8506499
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||||||||||||||    
T  8506531 gttttatagaaagatgtaaaaacaattttcatt 8506499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 12912326 - 12912387
Alignment:
Q  446 tatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||| |||||       ||||||||| |||||||||||||||||||||||    
T  12912326 tatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 12912387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 26447947 - 26447895
Alignment:
Q  253 tatgctatcaggttgttaacccaccaaaaactaaggataaaaataacaaagag 305  Q
    |||||||||| |||| |||||||  |||||||||||||||||||| |||||||    
T  26447947 tatgctatcatgttgctaacccattaaaaactaaggataaaaatatcaaagag 26447895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 507
Target Start/End: Complemental strand, 8959767 - 8959708
Alignment:
Q  448 tagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||| |||||       ||||||||| |||||||||||||||||||||||    
T  8959767 tagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 8959708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Complemental strand, 23233553 - 23233519
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttcttt 467  Q
    ||||||||||| |||||||||||||||||||||||    
T  23233553 taagaatttgacgtatagttttttgtgttttcttt 23233519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 32529433 - 32529495
Alignment:
Q  313 gataagattggaaataggtttaatttatcatttcctattggtgcaccaaacaacggattgaag 375  Q
    |||| |||| |||||| |||||||||||  |||  ||||||||||||||||| ||||||||||    
T  32529433 gatatgattagaaataagtttaatttattcttttttattggtgcaccaaacagcggattgaag 32529495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 39505251 - 39505326
Alignment:
Q  433 taagaatttgaagtatagtttttt-gtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| || |||||||||| |||||||||||       ||||||| | |||||||||||||||||||||||    
T  39505251 taagaatttgtagcatagtttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattttcatt 39505326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Original strand, 15416362 - 15416395
Alignment:
Q  392 tatcatatcatgtctccctatcatgtgcaccaaa 425  Q
    ||||||||||||||| ||||||||||||||||||    
T  15416362 tatcatatcatgtcttcctatcatgtgcaccaaa 15416395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 5369092 - 5369124
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  5369092 gttttataggaagatgtaaaaacaattttcatt 5369124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 10153989 - 10154021
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  10153989 gttttataggaagatgtaaaaacaattttcatt 10154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 13417140 - 13417184
Alignment:
Q  393 atcatatcatgtctccctatcatgtgcaccaaacggaccctaaga 437  Q
    |||||||||||| ||| ||||||| |||||||||||| |||||||    
T  13417140 atcatatcatgtatccttatcatgcgcaccaaacggatcctaaga 13417184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 31690681 - 31690713
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||||||||||||||| ||||||||||    
T  31690681 gttttatagaaagatgtaaaaataattttcatt 31690713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 32017803 - 32017771
Alignment:
Q  475 gttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||||| |||||||||||||||||||||||    
T  32017803 gttttataggaagatgtaaaaacaattttcatt 32017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 3447 - 3521
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||||||||||||||||       ||||||||| |||||||||||| ||||||||||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcatt 3521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 10187 - 10113
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| | | ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||    
T  10187 taagaatttggaatgtagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcatt 10113  T

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Target: scaffold0300 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Original strand, 592 - 666
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||| ||||||||||| ||||||||||||       |||||||||  ||||||||||||||||||||||    
T  592 taagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcatt 666  T

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Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 1150 - 1080
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| |||||||||||||||||||| |||       |||||||||||||||||||||||| ||||||||    
T  1150 aatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcatt 1080  T

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Target: scaffold0132; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 9110 - 9040
Alignment:
Q  437 aatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||| |||||||||||||||||||| |||       |||||||||||||||||||||||| ||||||||    
T  9110 aatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcatt 9040  T

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Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 78099 - 78025
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    |||||||||  ||||||||||||||||||||||||       ||| ||||| |||||||||||||||||||||||    
T  78099 taagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcatt 78025  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 507
Target Start/End: Complemental strand, 155002 - 154929
Alignment:
Q  433 taagaatttgaagtatagttttttgtgttttctttnnnnnnngttttatagaaagatgtaaaaacaattttcatt 507  Q
    ||||||| |||| |||||||||| || ||||||||       |||||||||||||||||||||||||||| ||||    
T  155002 taagaatctgaaatatagttttt-gtattttctttgaaaaaagttttatagaaagatgtaaaaacaatttacatt 154929  T

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