View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2121_high_1 (Length: 440)

Name: NF2121_high_1
Description: NF2121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2121_high_1
NF2121_high_1
[»] chr5 (26 HSPs)
chr5 (258-427)||(13413823-13413992)
chr5 (1-71)||(13413385-13413455)
chr5 (136-235)||(35310301-35310400)
chr5 (136-226)||(2917524-2917615)
chr5 (136-235)||(430455-430554)
chr5 (164-235)||(2566250-2566321)
chr5 (137-216)||(33692226-33692305)
chr5 (136-235)||(25663187-25663286)
chr5 (136-235)||(27336548-27336647)
chr5 (156-231)||(42921571-42921646)
chr5 (164-230)||(11005759-11005825)
chr5 (139-235)||(13167065-13167161)
chr5 (144-235)||(15292180-15292271)
chr5 (136-191)||(13413520-13413575)
chr5 (156-235)||(32269952-32270030)
chr5 (164-235)||(15506770-15506841)
chr5 (198-235)||(12033346-12033383)
chr5 (6-59)||(13419735-13419788)
chr5 (164-235)||(23023476-23023547)
chr5 (197-235)||(22188810-22188848)
chr5 (6-55)||(13426626-13426675)
chr5 (182-231)||(14423586-14423635)
chr5 (158-227)||(23092694-23092763)
chr5 (142-191)||(27913489-27913538)
chr5 (174-230)||(35455865-35455921)
chr5 (171-235)||(37873793-37873857)
[»] chr6 (16 HSPs)
chr6 (136-235)||(17249460-17249559)
chr6 (136-235)||(7749334-7749433)
chr6 (136-235)||(33220866-33220965)
chr6 (144-235)||(34168782-34168872)
chr6 (153-235)||(3137402-3137484)
chr6 (143-238)||(28543257-28543352)
chr6 (156-235)||(34304369-34304448)
chr6 (158-235)||(28625806-28625883)
chr6 (156-191)||(45820-45855)
chr6 (198-238)||(4166074-4166114)
chr6 (144-235)||(357871-357962)
chr6 (198-229)||(4206757-4206788)
chr6 (168-231)||(34554435-34554498)
chr6 (154-235)||(29338234-29338315)
chr6 (195-235)||(959493-959533)
chr6 (187-235)||(32115622-32115670)
[»] chr3 (21 HSPs)
chr3 (137-235)||(26772612-26772710)
chr3 (156-235)||(32546668-32546747)
chr3 (156-235)||(53785582-53785661)
chr3 (136-235)||(38671035-38671134)
chr3 (144-235)||(39583384-39583475)
chr3 (156-233)||(44706-44783)
chr3 (143-219)||(8592001-8592077)
chr3 (164-235)||(26276496-26276567)
chr3 (164-235)||(26856917-26856988)
chr3 (164-235)||(4669818-4669889)
chr3 (156-235)||(49017840-49017919)
chr3 (175-235)||(37133154-37133214)
chr3 (156-235)||(4763947-4764026)
chr3 (156-235)||(13582383-13582462)
chr3 (156-235)||(44198640-44198719)
chr3 (193-235)||(5338556-5338598)
chr3 (156-223)||(52741679-52741746)
chr3 (138-226)||(50657232-50657320)
chr3 (196-235)||(3443467-3443506)
chr3 (195-235)||(38978954-38978994)
chr3 (168-220)||(50446150-50446202)
[»] chr1 (26 HSPs)
chr1 (136-235)||(5453948-5454047)
chr1 (143-231)||(868560-868648)
chr1 (156-235)||(1114023-1114102)
chr1 (156-235)||(22346768-22346847)
chr1 (144-235)||(30688418-30688509)
chr1 (136-235)||(34644419-34644518)
chr1 (156-235)||(24177666-24177745)
chr1 (156-230)||(19035352-19035426)
chr1 (138-239)||(47459538-47459638)
chr1 (156-223)||(7213116-7213183)
chr1 (172-238)||(20259949-20260015)
chr1 (158-238)||(2764354-2764434)
chr1 (144-228)||(48841244-48841328)
chr1 (156-235)||(21472876-21472955)
chr1 (156-235)||(28493486-28493565)
chr1 (168-231)||(21934262-21934325)
chr1 (143-229)||(31737483-31737569)
chr1 (158-235)||(28041282-28041359)
chr1 (171-235)||(45835341-45835404)
chr1 (176-235)||(2898595-2898654)
chr1 (144-231)||(4611050-4611137)
chr1 (171-238)||(17077968-17078035)
chr1 (167-235)||(7483769-7483836)
chr1 (143-212)||(6790841-6790910)
chr1 (175-232)||(16323961-16324018)
chr1 (173-238)||(45659798-45659863)
[»] chr4 (34 HSPs)
chr4 (136-235)||(3329849-3329948)
chr4 (144-238)||(50001078-50001172)
chr4 (146-235)||(39001260-39001349)
chr4 (136-235)||(53619439-53619538)
chr4 (144-235)||(4419125-4419215)
chr4 (144-235)||(31846964-31847055)
chr4 (137-235)||(55933615-55933713)
chr4 (136-231)||(23255566-23255661)
chr4 (156-235)||(30940887-30940966)
chr4 (144-234)||(26521350-26521440)
chr4 (156-221)||(40392723-40392788)
chr4 (145-231)||(12053329-12053415)
chr4 (158-240)||(50464446-50464528)
chr4 (136-235)||(48657070-48657167)
chr4 (167-234)||(50442635-50442702)
chr4 (164-231)||(50463102-50463169)
chr4 (143-235)||(600847-600939)
chr4 (144-221)||(23604951-23605028)
chr4 (136-205)||(41372253-41372322)
chr4 (167-235)||(34107851-34107919)
chr4 (164-235)||(16955341-16955412)
chr4 (156-239)||(47585159-47585242)
chr4 (150-235)||(2852302-2852387)
chr4 (158-230)||(16009242-16009313)
chr4 (143-210)||(25931965-25932032)
chr4 (195-234)||(50351146-50351185)
chr4 (156-235)||(53170386-53170464)
chr4 (143-233)||(132245-132335)
chr4 (152-230)||(9601079-9601156)
chr4 (136-218)||(12917902-12917984)
chr4 (203-240)||(40005308-40005345)
chr4 (157-226)||(54927354-54927423)
chr4 (205-238)||(56462258-56462291)
chr4 (155-231)||(45661563-45661639)
[»] scaffold0009 (1 HSPs)
scaffold0009 (156-235)||(102979-103058)
[»] chr7 (33 HSPs)
chr7 (136-235)||(28517442-28517541)
chr7 (144-235)||(45003052-45003143)
chr7 (136-217)||(38766177-38766258)
chr7 (156-235)||(45613997-45614076)
chr7 (136-234)||(5825126-5825224)
chr7 (145-235)||(40726635-40726725)
chr7 (136-206)||(38832155-38832225)
chr7 (156-235)||(21326993-21327072)
chr7 (156-235)||(982822-982901)
chr7 (156-217)||(19277164-19277225)
chr7 (156-235)||(27027785-27027864)
chr7 (176-235)||(24527482-24527541)
chr7 (156-235)||(25187086-25187165)
chr7 (156-235)||(45974754-45974833)
chr7 (196-235)||(48539094-48539133)
chr7 (136-206)||(36931887-36931956)
chr7 (164-228)||(21454651-21454715)
chr7 (164-235)||(4501140-4501211)
chr7 (196-235)||(5972371-5972410)
chr7 (164-235)||(29054730-29054801)
chr7 (173-235)||(41117925-41117988)
chr7 (149-235)||(32584466-32584552)
chr7 (144-191)||(2520920-2520967)
chr7 (156-235)||(22197860-22197939)
chr7 (156-235)||(22239882-22239961)
chr7 (156-235)||(32336285-32336359)
chr7 (197-235)||(27521385-27521423)
chr7 (197-235)||(38839240-38839278)
chr7 (194-235)||(2904291-2904332)
chr7 (195-235)||(9281291-9281331)
chr7 (195-235)||(9292262-9292302)
chr7 (195-231)||(23037457-23037493)
chr7 (171-235)||(41370541-41370605)
[»] chr8 (18 HSPs)
chr8 (136-235)||(39434522-39434619)
chr8 (164-235)||(22589491-22589562)
chr8 (148-235)||(38815159-38815246)
chr8 (156-233)||(18804486-18804563)
chr8 (137-216)||(44337194-44337272)
chr8 (156-230)||(18596759-18596833)
chr8 (136-235)||(42659080-42659179)
chr8 (164-235)||(37514102-37514173)
chr8 (174-235)||(3187861-3187922)
chr8 (172-235)||(4699760-4699823)
chr8 (144-235)||(24320198-24320289)
chr8 (153-232)||(24350880-24350959)
chr8 (179-235)||(6592472-6592528)
chr8 (156-235)||(500115-500194)
chr8 (174-235)||(8882235-8882296)
chr8 (176-235)||(6618178-6618237)
chr8 (176-235)||(8227990-8228049)
chr8 (156-215)||(15566152-15566211)
[»] chr2 (20 HSPs)
chr2 (136-235)||(28224853-28224952)
chr2 (156-228)||(3208406-3208478)
chr2 (144-231)||(27494172-27494259)
chr2 (143-235)||(4413221-4413313)
chr2 (144-224)||(30602350-30602430)
chr2 (144-220)||(41702133-41702209)
chr2 (164-235)||(9685570-9685641)
chr2 (156-235)||(17344511-17344590)
chr2 (156-235)||(18745109-18745188)
chr2 (156-235)||(41868063-41868141)
chr2 (164-235)||(15515302-15515373)
chr2 (158-235)||(11921359-11921436)
chr2 (156-229)||(42122690-42122763)
chr2 (158-226)||(32612326-32612394)
chr2 (156-235)||(13413224-13413303)
chr2 (144-201)||(10587144-10587201)
chr2 (136-197)||(38723985-38724046)
chr2 (143-235)||(2626002-2626094)
chr2 (156-216)||(20143119-20143179)
chr2 (137-235)||(27502209-27502314)
[»] scaffold0406 (1 HSPs)
scaffold0406 (156-238)||(6761-6843)
[»] scaffold0309 (1 HSPs)
scaffold0309 (156-236)||(5197-5277)
[»] scaffold0148 (1 HSPs)
scaffold0148 (156-229)||(33123-33196)
[»] scaffold1768 (1 HSPs)
scaffold1768 (156-232)||(342-418)
[»] scaffold0244 (1 HSPs)
scaffold0244 (172-235)||(16809-16872)
[»] scaffold0470 (1 HSPs)
scaffold0470 (176-235)||(7496-7555)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 1e-88; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 258 - 427
Target Start/End: Original strand, 13413823 - 13413992
Alignment:
Q  258 cagtaaaaatagtcaattatttttagttgttaatttgtgcaaaaatagttgatgaatctcataatttagaatgagtattagtatagtatatttacaaaca 357  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13413823 cagtaaaaatagtcaattatttttacttgttaatttgtgcaaaaatagttgatgaatctcataatttagaatgagtattagtatagtatatttacaaaca 13413922  T
Q  358 tgggtagtactaatgataacaataaaaggagttcaaaacatacccaggaacaagtggatagaaggaagtg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13413923 tgggtagtactaatgataacaataaaaggagttcaaaacatacccaggaacaagtggatagaaggaagtg 13413992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13413385 - 13413455
Alignment:
Q  1 tctccactttgcttcctacttctgttactatacccgcaagctcatgcctgtatttattacaccaattacag 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13413385 tctccactttgcttcctacttctgttactatacccgcaagctcatgcctgtatttattacaccaattacag 13413455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 35310301 - 35310400
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| || |  |||| ||||||||||||||||||| |||||||||||||||||    
T  35310301 ctatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgtcgttaaacctctttggatggcaaaaccaattctcgtaaacacaacatt 35310400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 2917615 - 2917524
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggc-aaaaccaatcctcgtaaa 226  Q
    ||||||| ||||| || ||||||||||||||||||| |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  2917615 ctatcaatattacctacacatgaataggaggcaagcaggcaacaaactgcgccgctagacctttttggatggcaaaaaccaatcctcgtaaa 2917524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 430455 - 430554
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||  ||||||||||||||||||| | | ||||||||| ||| | ||||||||||||||||| || ||||||||||||||||||||||    
T  430455 ctatcaatattacttgcacatgaataggaggcaagcagacnacaagctgcaccgatagacctttttggatggcataatcaatcctcgtaaacacaacatt 430554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 2566321 - 2566250
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  2566321 aggcaagtgggcaacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 2566250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 33692305 - 33692226
Alignment:
Q  137 tatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaa 216  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||    
T  33692305 tatcaatattacttacacatgaataggaggcaagcaggcaacaagctgcgccgctagatctttttggatggaaaaaccaa 33692226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 25663286 - 25663187
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| |||| || ||||||||| || ||||||||||||| || | |||||||||||||| |||| ||||||||||||||| |||||||    
T  25663286 ctatcaatattacttacacataaaaaggaggcaaacgagcaacaagctgcgtcgttagacctttttggatgacaaagccaatcctcgtaaactcaacatt 25663187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 27336548 - 27336647
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| ||||||||||||| ||||||| ||| || |||| ||||| ||||||||| |||||||||| ||||||| ||||| ||||||||    
T  27336548 ctatcaatattacttacacatgaataggagacaagcggacaataaactgcaccgctagaccttttttgatggcaaaatcaatccttgtaaaaacaacatt 27336647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 42921571 - 42921646
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    ||||||| ||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  42921571 tgaatagaaggcaagtgggaaacaagctgcgccgctagatctttttggatggcaaaaccaatccttgtaaacacaa 42921646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 11005759 - 11005825
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacaca 230  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||    
T  11005759 aggcaagcgggcaacaagctgcgccgctaagcctttttggatggcaaaaccaatcctagtaaacaca 11005825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 13167161 - 13167065
Alignment:
Q  139 tcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| |||| ||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||  || || ||||| |||||||| |||||||    
T  13167161 tcaatattaattacacatgaataggaggcaagtgggcaacaagctgcgccgctagatctttttggataacagaatcaatcatcgtaaacccaacatt 13167065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 15292271 - 15292180
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| |||||| ||||||| ||||||| ||||||||| |||||||||    | |||||||||||||||| |||||||| |||||||||||||    
T  15292271 attatttatacttgaatagaaggcaagtgggcaacaaactgcgccgccaagcttttttggatggcaaaatcaatcctcataaacacaacatt 15292180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 13413520 - 13413575
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgct 191  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||||||| |||||    
T  13413520 ctatcaaaattacttacacatcaataggagacaagcgggcaacaagctgcaccgct 13413575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 32270030 - 32269952
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| ||||||||||| |||||||||| |||||   | |||||||||||| ||| ||||||||||||||||||||||    
T  32270030 tgaatagaaggcaagcgggtaacaagctgc-ccgctatgcttttttggatggcgaaatcaatcctcgtaaacacaacatt 32269952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 15506841 - 15506770
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| || |||||||| ||||||| | | ||||||| ||||| |||| ||||||||||||||||||||||    
T  15506841 aggcaaacgagcaacaagttgcgccgttaggccttttttgatggtaaaatcaatcctcgtaaacacaacatt 15506770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 12033346 - 12033383
Alignment:
Q  198 ttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  12033346 ttttggatggcaaaaccaatcatcgtaaacacaacatt 12033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 13419735 - 13419788
Alignment:
Q  6 actttgcttcctacttctgttactatacccgcaagctcatgcctgtatttatta 59  Q
    ||||||||||| || || ||||||||||||||||| ||||||||| ||||||||    
T  13419735 actttgcttccaacctcggttactatacccgcaagttcatgcctgcatttatta 13419788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 23023476 - 23023547
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| ||| ||| ||| |||||| || | |||||||||||| ||||| ||||| ||||||||||||||||    
T  23023476 aggcaaacggacaataagatgcgcccctaggcctttttggatgacaaaatcaatcttcgtaaacacaacatt 23023547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 22188848 - 22188810
Alignment:
Q  197 tttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  22188848 tttttggatgacaaaaccaattctcgtaaacacaacatt 22188810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 13426626 - 13426675
Alignment:
Q  6 actttgcttcctacttctgttactatacccgcaagctcatgcctgtattt 55  Q
    ||||||||||| || |||||||| ||||||||||| ||||||||| ||||    
T  13426626 actttgcttccaacctctgttacaatacccgcaagttcatgcctgcattt 13426675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 14423586 - 14423635
Alignment:
Q  182 ctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    |||| ||||| || ||||||||||||||||||||||||| || |||||||    
T  14423586 ctgcaccgctagatctttttggatggcaaaaccaatccttgtgaacacaa 14423635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 23092694 - 23092763
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaac 227  Q
    ||||| |||||||| | |||||| |||||  ||| |||||| ||||||| ||||| ||||||||||||||    
T  23092694 aatagaaggcaagcagacaacaaactgcgttgctagaccttgttggatgacaaaatcaatcctcgtaaac 23092763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 27913489 - 27913538
Alignment:
Q  142 aaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgct 191  Q
    |||||| ||| ||| | |||| ||||||||||||||||||||||||||||    
T  27913489 aaattatttacacaaggatagaaggcaagcgggcaacaagctgcgccgct 27913538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 35455865 - 35455921
Alignment:
Q  174 gcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacaca 230  Q
    |||||||||| ||| ||| ||| |||||||| |||||||||||| |||||| |||||    
T  35455865 gcaacaagctccgctgctagacatttttggacggcaaaaccaattctcgtagacaca 35455921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 37873857 - 37873793
Alignment:
Q  171 cgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| |||||| ||| ||||| | ||||||| ||| |||||| |||||||| |||||||||||||    
T  37873857 cgggtaacaagttgcaccgctaggccttttttgatagcaaaatcaatcctcttaaacacaacatt 37873793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 17249559 - 17249460
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17249559 ctatcaatattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacacaacatt 17249460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 7749334 - 7749433
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  7749334 ctatcaatattagttacacatgaataggaggcaagcgggcaacaagctgcaccgctagaccttttaggatggcaaaaccaatcctcgtaaacacaacatt 7749433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 33220965 - 33220866
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||  |||||||| |||||||    
T  33220965 ctatcaatattacttacacatgaataggaggcaagcggccaacaagctgcgccgctagaccttttaggatggcaaaaccaattatcgtaaacgcaacatt 33220866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 34168782 - 34168872
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| ||| |||||||||| |||||||||||| ||||| ||||||||| | ||||||||||| ||||||||||||||||| |||||||||||    
T  34168782 attaattacacatgaatagaaggcaagcgggcgacaagttgcgccgctaggcctttttggatagcaaaaccaatcctcgt-aacacaacatt 34168872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 3137484 - 3137402
Alignment:
Q  153 acatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||| | |||||| ||||||||||| ||| | |||   |||||||||||||||||||||||||||||||||||||||||    
T  3137484 acatgaatggaaggcaaacgggcaacaagttgcactgctaagcctttttggatggcaaaaccaatcctcgtaaacacaacatt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 28543257 - 28543352
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    |||||||||  ||||||||| |||||||||| |||  || ||||||||| || |||||  ||||||||||||||||||| |||||| || ||||||    
T  28543257 aattacttacgcatgaatagaaggcaagcggacaattagttgcgccgctagatcttttcagatggcaaaaccaatcctcttaaacataatatttat 28543352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 34304369 - 34304448
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||  ||||||||||  || ||||||  |||||||||||| |||||| ||||||||||||| ||||||||    
T  34304369 tgaataggaggcagacgggcaacaatttgtgccgctatacctttttggattgcaaaatcaatcctcgtaaatacaacatt 34304448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 28625806 - 28625883
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||| |||||| |||| || ||||||||||||| || ||||||| ||||||||| |||||  |||||||||||||||    
T  28625806 aatagaaggcaaacgggtaataagctgcgccgctagatctttttgaatggcaaaatcaatctccgtaaacacaacatt 28625883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 45855 - 45820
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgct 191  Q
    ||||||||||||||||||||||||||||||||||||    
T  45855 tgaataggaggcaagcgggcaacaagctgcgccgct 45820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 4166114 - 4166074
Alignment:
Q  198 ttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  4166114 ttttggatggcaaaaccaatcctcgtaaacactatatttat 4166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 357962 - 357871
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||| | ||||||||||| ||| | | |||||||||  ||||||  || ||||| ||||||||||  |||| ||||||||||||||||    
T  357962 attacttacatatgaataggagacaaaccgacaacaagctatgccgctatacatttttagatggcaaaattaatcttcgtaaacacaacatt 357871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 229
Target Start/End: Complemental strand, 4206788 - 4206757
Alignment:
Q  198 ttttggatggcaaaaccaatcctcgtaaacac 229  Q
    ||||||||||||||||||||||||||||||||    
T  4206788 ttttggatggcaaaaccaatcctcgtaaacac 4206757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 34554498 - 34554435
Alignment:
Q  168 aagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    ||||| |||| |||||| ||| || | |||||||||||| ||||| ||||||||||||||||||    
T  34554498 aagcgagcaataagctgtgccactaggcctttttggatgacaaaatcaatcctcgtaaacacaa 34554435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 29338315 - 29338234
Alignment:
Q  154 catgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||  || |||| |||||||||||||| | ||| | || |||||||| | |||| ||||||| ||||||||||||||    
T  29338315 catgaataaaagacaagtgggcaacaagctgcactgctaggccattttggatagaaaaatcaatccttgtaaacacaacatt 29338234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 959493 - 959533
Alignment:
Q  195 cctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||| ||||| ||||||||||||||||||||||    
T  959493 cctttttagatgacaaaatcaatcctcgtaaacacaacatt 959533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 32115622 - 32115670
Alignment:
Q  187 ccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||| ||||||||| ||| |||||| ||||| ||||||||||||||||    
T  32115622 ccgctagacctttttagatagcaaaatcaatcatcgtaaacacaacatt 32115670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 4e-39; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 26772612 - 26772710
Alignment:
Q  137 tatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26772612 tatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 26772710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 32546668 - 32546747
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  32546668 tgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacatt 32546747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 53785582 - 53785661
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  53785582 tgaatagaaggcaagcgggcaacaagctacgccgctggaccttgttggatggcaaaaccaatcctcgtaaacataacatt 53785661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 38671134 - 38671035
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||| ||| |||| ||||||||| |||||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||| ||||||||||    
T  38671134 ctatcaatattatttacacataaataggaggtaagcggacaacaagctgcgccgctagacttttttagatggcaaaaccaatcctcgtacacacaacatt 38671035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 39583475 - 39583384
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||| |||||||||| | |||||| | ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  39583475 attacttacacatgaatagaaagcaagcagacaacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacgacatt 39583384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 44706 - 44783
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaaca 233  Q
    ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| || |||||||||    
T  44706 tgaatagaaggcaagcgggcaacaaactgcgccgctagacctttttggatggcaaaacaaatccttgtgaacacaaca 44783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 8592001 - 8592077
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcc 219  Q
    ||||||||| |||||||||  ||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  8592001 aattacttacacatgaatataaggcaagtgggtaacaagctgcgccgctgggcctttttggatggcaaaatcaatcc 8592077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 26276496 - 26276567
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||||||| | ||||| || ||||||||||||||||| |||||||| |||||||||||||    
T  26276496 aggcaagcgggcaacaagctacaccgctagatctttttggatggcaaaatcaatcctcataaacacaacatt 26276567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 26856988 - 26856917
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||| || |||||||||    
T  26856988 aggcaagcgagcaacaagctgcgccgctaggcctttttggatggtaaaaccaatcctcgcaagcacaacatt 26856917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 4669889 - 4669818
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||||||||||||||   ||||||||||||  ||||| ||||| ||||||||||||||||    
T  4669889 aggcaagcgggcaacaagctgcgccgccaaacctttttggataacaaaatcaatcatcgtaaacacaacatt 4669818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 49017840 - 49017919
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||| ||||||||||| |||| |   ||||||||||||||||| |||||||| |||||||||||||    
T  49017840 tgaatagaaggcaagcggacaacaagctgcaccgccgatactttttggatggcaaaatcaatcctcataaacacaacatt 49017919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 37133214 - 37133154
Alignment:
Q  175 caacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||    
T  37133214 caacaaactgcgccgctagacctttttggatcgcaaaaccaatccttataaacacaacatt 37133154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 4764026 - 4763947
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||||||| |||||| |    ||||||||||||||||  | |||||||||||||||||||||    
T  4764026 tgaatagaaggcaagcgggcaacaagttgcgccaccaagcctttttggatggcaattctaatcctcgtaaacacaacatt 4763947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 13582383 - 13582462
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||| || | ||| |||| | |||||||||||||| ||| ||||| ||||||||||||||||    
T  13582383 tgaatagaaggcaagcgggcaataaacagcgtcgctaggcctttttggatggctaaatcaatcttcgtaaacacaacatt 13582462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 44198640 - 44198719
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||| |||||||||| | ||||  ||||||||||||||||||| ||||  ||| ||||||||||||    
T  44198640 tgaatagaaggcaagcggacaacaagctgtgtcgctcaacctttttggatggcaaaatcaattatcgcaaacacaacatt 44198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 5338556 - 5338598
Alignment:
Q  193 gacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  5338556 gaccattttggatggcaaaaccaatcctcgtaaacacaacatt 5338598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 52741746 - 52741679
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgt 223  Q
    ||||||| |||| ||||||||| ||| |||| |||| ||||||||||||||||||||| |||| ||||    
T  52741746 tgaatagaaggcgagcgggcaataagttgcgtcgctagacctttttggatggcaaaacaaatcttcgt 52741679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 50657232 - 50657320
Alignment:
Q  138 atcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaa 226  Q
    ||||| |||||||| ||||||||| ||| ||||| | |||||| || || |||| || ||||||| || |||||||||||| |||||||    
T  50657232 atcaatattacttacacatgaatatgagacaagctgacaacaaactacgtcgctagatctttttgaatagcaaaaccaatcttcgtaaa 50657320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 3443506 - 3443467
Alignment:
Q  196 ctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  3443506 ctttgtggatggcaaaaccaatcatcgtaaacacaacatt 3443467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 38978994 - 38978954
Alignment:
Q  195 cctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||||||||||| |||  ||||||||||||||||    
T  38978994 cctttttggatggcaaaactaattttcgtaaacacaacatt 38978954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 50446150 - 50446202
Alignment:
Q  168 aagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcct 220  Q
    ||||||||||||| |||||| |||   |||||||||||| |||||||||||||    
T  50446150 aagcgggcaacaacctgcgctgctaatcctttttggatgacaaaaccaatcct 50446202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 5453948 - 5454047
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  5453948 ctatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatgacaaaaccaatccttgtaaacacaacatt 5454047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 868648 - 868560
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    ||||| ||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  868648 aattatttacacttgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatccttgtgaacacaa 868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 1114102 - 1114023
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||    
T  1114102 tgaatagaagccaagcgggcaacaagctgtgccgttagacctttttggatggcaaaaccaatcctcgtaaacacaacatt 1114023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 22346768 - 22346847
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  22346768 tgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaactaatcctcgtgaacacaacatt 22346847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 30688418 - 30688509
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| ||| ||||||||||  ||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  30688418 attaattacacatgaatagatggcaagcgggcaacaagctgcgccgctaggcctttttggataacaaaaccaatcctcgtaaacacaacatt 30688509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 34644419 - 34644518
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| ||||  ||||||| ||||||||| ||||||||||||| |||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  34644419 ctatcaatattatatatacataaataggaggtaagcgggcaacaaactgcgccgctagacttttttggatggcaaaatcaatcatcgtaaacacaacatt 34644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 24177745 - 24177666
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  24177745 tgaatagaagacaagcgggcaacaagctgcaccgctagacctttttggttggcaaaaccaatcctcgtgaacacaacatt 24177666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 19035352 - 19035426
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacaca 230  Q
    ||||||| |||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  19035352 tgaatagaaggcaatcggacaacaagctgcgccgctagacctttttggatgacaaaaccaatcctcgtgaacaca 19035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 47459538 - 47459638
Alignment:
Q  138 atcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacattta 237  Q
    ||||| ||| |||| ||||||||||||| ||||| | ||||||||||||| ||| |||||||||| ||||| ||| |||| |||||||||||||||||||    
T  47459538 atcaatattccttacacatgaataggagccaagcagacaacaagctgcgc-gctagacctttttgaatggctaaatcaattctcgtaaacacaacattta 47459636  T
Q  238 ta 239  Q
    ||    
T  47459637 ta 47459638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 7213116 - 7213183
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgt 223  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||    
T  7213116 tgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggtaaaaccaatcatcgt 7213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 20260015 - 20259949
Alignment:
Q  172 gggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||   ||||||||||||||||    
T  20260015 gggcaacaaactgcgccgctagacctttttggatggcaaaaccaatccatataaacacaacatttat 20259949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 2764354 - 2764434
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    |||| |||| || |||| ||||||||||||||||  |||||||||||||| |||| ||||| |||||||||||||||||||    
T  2764354 aatacgagggaaacgggtaacaagctgcgccgctaaacctttttggatggtaaaatcaatcatcgtaaacacaacatttat 2764434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 48841328 - 48841244
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaaca 228  Q
    |||||||| ||||||||| |||| |||||| ||||||| ||||| ||| ||| ||||||||| |||||| |||||||||||||||    
T  48841328 attacttacacatgaatatgaggtaagcggacaacaagttgcgctgctagacttttttggattgcaaaatcaatcctcgtaaaca 48841244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 21472876 - 21472955
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| | |||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  21472876 tgaatagaatgcaagcgggcaataagttgcgccgctagacctttttggatggcaaaaccagtcctcctgaacgcaacatt 21472955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 28493565 - 28493486
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || ||| ||| |||||| |||||||||| |||||||||||||||||||| |||||||||| |||| ||||||    
T  28493565 tgaatagaagacaaacggacaacaaactgcgccgctagacctttttggatggcaaaatcaatcctcgtgaacataacatt 28493486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 21934262 - 21934325
Alignment:
Q  168 aagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||||||||| |||| ||||    
T  21934262 aagcaggcaacaagctgcgccgctaaccctttttggatggcaaaaccaatcctcttaaatacaa 21934325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 31737569 - 31737483
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacac 229  Q
    ||||| ||| || ||||||| |||||| | | ||||||||||||||||    |||||||||||||||||| ||||||||||||||||    
T  31737569 aattatttacacttgaatagaaggcaaacagacaacaagctgcgccgccaagcctttttggatggcaaaatcaatcctcgtaaacac 31737483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 28041359 - 28041282
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||| || ||||||| ||||||||| ||||||| ||||||||||||||| |||| |||||||| | | |||||||||    
T  28041359 aatagaagacaagcggacaacaagctccgccgctagacctttttggatggaaaaatcaatcctcatgagcacaacatt 28041282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 45835404 - 45835341
Alignment:
Q  171 cgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || |||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  45835404 cgggcaataaactgcgcagctagac-tttttggatggcaaaatcaatcctcgtaaacacaacatt 45835341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 2898595 - 2898654
Alignment:
Q  176 aacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||| |||||||   |||||||||||||||||| |||||||| |||||||||||||    
T  2898595 aacaagctacgccgctaagcctttttggatggcaaaatcaatcctcttaaacacaacatt 2898654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 4611050 - 4611137
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    |||| |||||| ||||||  |||||||||| |||||||||| || | | |||||||||||||| ||||| ||||| |||| |||||||    
T  4611050 attatttatacttgaataaaaggcaagcggacaacaagctgtgctgttagacctttttggatgacaaaatcaatcatcgtgaacacaa 4611137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 17078035 - 17077968
Alignment:
Q  171 cgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    |||||||||| |||||||| | ||| ||||| |||||||||||||||| || | ||||||||||||||    
T  17078035 cgggcaacaatctgcgccgttagacttttttagatggcaaaaccaatcatcatgaacacaacatttat 17077968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 7483769 - 7483836
Alignment:
Q  167 caagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| |||||| |||||||||||   ||||||| ||||||||||| |||| ||||||||||||||||    
T  7483769 caagcgagcaaca-gctgcgccgctaagcctttttagatggcaaaactaatcttcgtaaacacaacatt 7483836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 6790910 - 6790841
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaa 212  Q
    ||||||||| |||||||||| ||||| ||||| ||||| ||| |||||| |  ||||||||||| |||||    
T  6790910 aattacttacacatgaatagaaggcaggcgggtaacaaactgtgccgctaggtctttttggatgacaaaa 6790841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 16324018 - 16323961
Alignment:
Q  175 caacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaac 232  Q
    ||||||||||| |  || | |||||||||||||  |||||||||||||||||||||||    
T  16324018 caacaagctgcactactaggcctttttggatggttaaaccaatcctcgtaaacacaac 16323961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 45659863 - 45659798
Alignment:
Q  173 ggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    ||||||||  ||||| ||| ||||||||||| || |||||||  ||||||||||||| ||||||||    
T  45659863 ggcaacaatttgcgcagctagacctttttgggtgacaaaaccggtcctcgtaaacacgacatttat 45659798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 3329849 - 3329948
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  3329849 ctatcaatattacttacacgtgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcatcgtaaacacagcatt 3329948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 50001172 - 50001078
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||    
T  50001172 attacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagatctttttggatggcaaaatcaatcttcgtaaacacaacatttat 50001078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 39001260 - 39001349
Alignment:
Q  146 tacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  39001260 tacttacacatgaataggaggcaagcgggcaacaaactgcgccgctagacctttttggatgacaaaaccaatcctcgtaaacacaacatt 39001349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 53619439 - 53619538
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| |||||||||||||| |||  ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  53619439 ctatcaatattacttacacatgaataggaggtaagtaggcaacaagctgcgccgctagacctttttggatggcaaaaccaattctcgtaaacacaacatt 53619538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 4419125 - 4419215
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||||||||||    
T  4419125 attacttgcacatgaataggaggcaagcgggcaacaagctgcgccgctaga-ttttttggatggcaaaaccaatcatcgtaaacacaacatt 4419215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 31846964 - 31847055
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||  |||||||||||    
T  31846964 attacttacacatgaataggaggcaagcgggcaacaacctgcgccgctagacctttttggatggcataacgaatcctcgctaacacaacatt 31847055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 55933713 - 55933615
Alignment:
Q  137 tatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| |||||||  ||||||||||||||||||||| |||||| ||||| |||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  55933713 tatcaatattacttgcacatgaataggaggcaagcggacaacaaactgcgtcgctagacttttttggatggcaaaatcaatcatcgtaaacacaacatt 55933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 23255566 - 23255661
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    ||||||| |||||| | | |||||||||||| |||||| ||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  23255566 ctatcaatattactcacatatgaataggaggtaagcggacaacaagctgcgccgctagacttttctggatggcaaaatcaatcctcgtaaacacaa 23255661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 30940966 - 30940887
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| | |||||||||||    
T  30940966 tgaatagaaggcaagcgggcaacaagctgcgtcgctagacctttttggatggcaaaatcaatcctcatgaacacaacatt 30940887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 26521350 - 26521440
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacat 234  Q
    |||||||| ||||| |||| |||||||||| ||| |||||| ||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  26521350 attacttacacatggatagaaggcaagcggacaaaaagctgtgccgctaaacctttttggatgacaaaaccaatcctcgtaaacacaacat 26521440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 40392788 - 40392723
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctc 221  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  40392788 tgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaaccaatcctc 40392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 12053329 - 12053415
Alignment:
Q  145 ttacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    ||||||| |||||||||| |||||||| | |||||||||||| |||| | ||||||| ||||||||||||||| |||||||||||||    
T  12053329 ttacttacacatgaatagaaggcaagcagacaacaagctgcgtcgctcggcctttttcgatggcaaaaccaattctcgtaaacacaa 12053415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 50464528 - 50464446
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttatat 240  Q
    ||||| |||||||||| ||||||||||||||||| |  |||||||||||||||||  ||||||||||||||||||||| ||||    
T  50464528 aatagaaggcaagcggacaacaagctgcgccgctaggtctttttggatggcaaaataaatcctcgtaaacacaacattcatat 50464446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 48657167 - 48657070
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||||||  | || || || ||||||||| ||||||| ||||| ||||||||||||||||    
T  48657167 ctatcaatattacttatacatgaataggagccaagcaggcaacaagc--caccactagatctttttggacggcaaaatcaatcatcgtaaacacaacatt 48657070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 50442702 - 50442635
Alignment:
Q  167 caagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacat 234  Q
    |||||||||||||||||||||| ||   ||||||||||||||||||||||||||| ||||||||||||    
T  50442702 caagcgggcaacaagctgcgccactaaccctttttggatggcaaaaccaatcctcttaaacacaacat 50442635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 50463169 - 50463102
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    |||||||||| || |||||||||||||| |  |||||||||||||||||| |||||||||||||||||    
T  50463169 aggcaagcggacagcaagctgcgccgctaggtctttttggatggcaaaacaaatcctcgtaaacacaa 50463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 600939 - 600847
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||| ||| || ||||||| |||||||||| ||||||||| || ||||  || ||||||||||||||||| |||| ||||||||||| ||||    
T  600939 aattatttacacttgaatagaaggcaagcggacaacaagctacgtcgctatacatttttggatggcaaaactaatcatcgtaaacacagcatt 600847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 23604951 - 23605028
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctc 221  Q
    |||| ||| |||||||||| || ||| ||| ||||||| ||||||||| |||||||||||||| ||||| ||||||||    
T  23604951 attatttacacatgaatagaagacaaccggacaacaagttgcgccgctagacctttttggatgacaaaatcaatcctc 23605028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 41372322 - 41372253
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggat 205  Q
    ||||||| |||||||| ||||||||||||||||||| | ||||||| ||||| ||| ||||||| |||||    
T  41372322 ctatcaatattacttacacatgaataggaggcaagcagacaacaagttgcgctgctagacctttgtggat 41372253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 34107919 - 34107851
Alignment:
Q  167 caagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| ||||||||||||| |||| |  || |||||||||| |||||||||||||||| |||||||||||    
T  34107919 caagtgggcaacaagctgtgccgttaaacttttttggatgacaaaaccaatcctcgtgaacacaacatt 34107851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 16955341 - 16955412
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||| |||||| ||||| ||  ||| |||||| |||||| ||| ||||||||||||||||||||||    
T  16955341 aggcaagcggacaacaaactgcgtcgtcggatcttttttgatggccaaatcaatcctcgtaaacacaacatt 16955412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 47585242 - 47585159
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttata 239  Q
    ||||||| |||||| | | |||||| || |||||||  |||||||| |||| ||||||||||| |||||||||||| |||||||    
T  47585242 tgaatagaaggcaaacagacaacaaactacgccgctaaacctttttagatgacaaaaccaatcttcgtaaacacaaaatttata 47585159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 2852302 - 2852387
Alignment:
Q  150 tatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||| | ||| || | |||||||||||||||||||   |||||||| |||  |||||||||||| || |||||||||||    
T  2852302 tatacatgaatggaaggtaatcaggcaacaagctgcgccgctaagcctttttgaatgaaaaaaccaatccttgtgaacacaacatt 2852387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 16009242 - 16009313
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacaca 230  Q
    ||||| |||||||| |||||||||||||||||||  ||||||||  || |||||||||||| || ||||||||    
T  16009242 aatagaaggcaagcaggcaacaagctgcgccgct-aacctttttttatcgcaaaaccaatcatcttaaacaca 16009313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 25932032 - 25931965
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaa 210  Q
    |||||||||||||||||||  |||||| ||| ||||||| || |||||| || ||||||| |||||||    
T  25932032 aattacttatacatgaataaaaggcaaacggacaacaagttgtgccgctagatctttttgaatggcaa 25931965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 50351185 - 50351146
Alignment:
Q  195 cctttttggatggcaaaaccaatcctcgtaaacacaacat 234  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  50351185 cctttttggatggcaaaaccaatccacttaaacacaacat 50351146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 53170386 - 53170464
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| | ||||| ||||| | ||| ||||||||| ||| |||||| |||||||||| |||||||||||    
T  53170386 tgaatagaaggcaagcagacaaca-gctgcactgctagacctttttagatagcaaaatcaatcctcgtgaacacaacatt 53170464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 132245 - 132335
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaaca 233  Q
    |||||||||  ||||||||| ||||||||||| |||||||||| ||| |  |||||||| ||||  |||| | || || ||||||||||||    
T  132245 aattacttacgcatgaatagaaggcaagcggggaacaagctgcaccgttatacctttttagatgataaaatcgattcttgtaaacacaaca 132335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 9601079 - 9601156
Alignment:
Q  152 tacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacaca 230  Q
    |||| |||||| || ||||||| ||||||| ||||||| |  | ||||||||||| ||||| |||||||||||||||||    
T  9601079 tacacgaatagaagacaagcggacaacaagttgcgccgtta-agctttttggatgacaaaatcaatcctcgtaaacaca 9601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 12917902 - 12917984
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatc 218  Q
    ||||||| ||||||||  |||||||| ||||||||| | ||| ||| || |||| | |||||||||||||| ||||| |||||    
T  12917902 ctatcaatattacttactcatgaataagaggcaagcagacaataagttgtgccgttagacctttttggatgacaaaatcaatc 12917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 40005345 - 40005308
Alignment:
Q  203 gatggcaaaaccaatcctcgtaaacacaacatttatat 240  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  40005345 gatggcaaaaccaatccttgtaaacacaacattgatat 40005308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 54927354 - 54927423
Alignment:
Q  157 gaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaa 226  Q
    |||||| || |||||| ||||||||||||||||||   ||||| | |||||||||| |||||||| ||||    
T  54927354 gaatagaagacaagcgtgcaacaagctgcgccgctaaccctttctagatggcaaaatcaatcctcttaaa 54927423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 56462291 - 56462258
Alignment:
Q  205 tggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    ||||||||||||| ||||||||||||||||||||    
T  56462291 tggcaaaaccaattctcgtaaacacaacatttat 56462258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 45661563 - 45661639
Alignment:
Q  155 atgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    |||| ||| ||||||||| ||||||| |||  ||| | |  |||||||||| | |||||||||||||||||||||||    
T  45661563 atgagtagaaggcaagcgtgcaacaaactgtaccgttaggtctttttggatagtaaaaccaatcctcgtaaacacaa 45661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 102979 - 103058
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  102979 tgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacacaacatt 103058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 28517541 - 28517442
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| ||||||||||||||||  |||||||||||||| | |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  28517541 ctatcaatattacttacacatgaataggaggcagacgggcaacaagctgtgtcgctagacttttttggatggcaaaaccaatcctcgtaaacacaacatt 28517442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 45003143 - 45003052
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  45003143 attacttacacatgaataggaggcaagcggacaataagctgcgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacatt 45003052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 38766177 - 38766258
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaat 217  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  38766177 ctatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgcagctagacctttttggatggcaaaaccaat 38766258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 45614076 - 45613997
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  45614076 tgaatagaaggcaagcggacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtaaacacaacatt 45613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 5825126 - 5825224
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacat 234  Q
    ||||||| ||| |||| ||||||||||||||||||| || ||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||    
T  5825126 ctatcaatatttcttacacatgaataggaggcaagcaggtaacaagctgcgccgtaagacctttttcgatggcaaaaccaatcctcgtaaacacaacat 5825224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 40726725 - 40726635
Alignment:
Q  145 ttacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| ||||||||||||||||||||||||||||||||||  | | ||| |||||||||||||||| |||||||| |||||||||||||    
T  40726725 ttacttacacatgaataggaggcaagcgggcaacaagctgcgatgttagacatttttggatggcaaaatcaatcctcataaacacaacatt 40726635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 38832155 - 38832225
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatg 206  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38832155 ctatcaatattacttacatatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatg 38832225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 21327072 - 21326993
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||||||    
T  21327072 tgaatagaaggcaagcagacaacaagctgcgccgttagacctttttggatggcaaaatcaatcctcgtgaacacaacatt 21326993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 982822 - 982901
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||| | |||||||||||| | |||| |||||||||||||||||| |||||||||||| |||||||||||    
T  982822 tgaatagaaggcaaacaggcaacaagctgtgtcgctagacctttttggatggcaataccaatcctcgtgaacacaacatt 982901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 19277164 - 19277225
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaat 217  Q
    ||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  19277164 tgaatagaaggcaggcgggcaataagctgcgccgctagacctttttggatggcaaaaccaat 19277225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 27027864 - 27027785
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| ||||||| ||| |||||||| | ||||| || |||||||||| ||||||||||||||||| |||||||||||    
T  27027864 tgaatagaaggcaagtgggtaacaagctacaccgctagatctttttggatagcaaaaccaatcctcgtgaacacaacatt 27027785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 24527482 - 24527541
Alignment:
Q  176 aacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||| || ||||||||    
T  24527482 aacaagctgcgccgctagatctttttggatgacaaaaccaatcctcgtgaatacaacatt 24527541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 25187165 - 25187086
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||||||||||||||||| || |||||| ||||| |||| ||||| | |  |||||||||||    
T  25187165 tgaatagaaggcaagcgggcaacaagctgcgccgctagatctttttagatggtaaaatcaatcattgggaacacaacatt 25187086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 45974833 - 45974754
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || ||||||| |||||||||||||| || |||||||||||||| |||||   ||||| ||||||||||||||    
T  45974833 tgaatagaagacaagcggacaacaagctgcgccactagacctttttggatgacaaaatttatccttgtaaacacaacatt 45974754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 48539094 - 48539133
Alignment:
Q  196 ctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48539094 ctttttggatggcaaaaccaatcctcgtaaacacaacatt 48539133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 36931956 - 36931887
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatg 206  Q
    ||||||| |||||||| | |||||||||||||||||||  |||||||||||||||| || |||||||||||    
T  36931956 ctatcaatattacttacatatgaataggaggcaagcggataacaagctgcgccgctaga-ctttttggatg 36931887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 21454651 - 21454715
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaaca 228  Q
    ||||||||| ||||||||||||||||||   |||||||| || ||||||| ||||||||||||||    
T  21454651 aggcaagcgagcaacaagctgcgccgctcatcctttttgtattgcaaaactaatcctcgtaaaca 21454715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 4501140 - 4501211
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||| ||| ||| ||||| ||| ||||||||| |||| |||| | |||||||||||||||||||||    
T  4501140 aggcaagcggacaataagatgcgctgctagacctttttagatgacaaagctaatcctcgtaaacacaacatt 4501211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 5972410 - 5972371
Alignment:
Q  196 ctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5972410 ctttttggatggcaaaactaatcctcgtaaacacaacatt 5972371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 29054730 - 29054801
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||| |||| |||||||||||||   ||||| ||||||||||||||||||||| |||| || |||||    
T  29054730 aggcaagcgagcaataagctgcgccgctaatcctttatggatggcaaaaccaatcctcttaaaaactacatt 29054801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 41117988 - 41117925
Alignment:
Q  173 ggcaacaagc-tgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||| ||||||||||||| ||||||||| |||||| ||||| |||| |||||||||||    
T  41117988 ggcaacaagcctgcgccgctggacttttttggatagcaaaatcaatcatcgtgaacacaacatt 41117925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 32584466 - 32584552
Alignment:
Q  149 ttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| | |||| | |||||||||| ||||| ||||| ||| | ||||||||||||| |||| ||||| | ||||||||||||||    
T  32584466 ttatacacgtatagaaagcaagcgggcgacaagttgcgctgctaggcctttttggatggtaaaatcaatctttgtaaacacaacatt 32584552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 2520967 - 2520920
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgct 191  Q
    |||| ||| |||||||||| |||||||||| |||||||||||||||||    
T  2520967 attaattacacatgaatagaaggcaagcggacaacaagctgcgccgct 2520920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 22197860 - 22197939
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || ||||||||||||||| ||| ||||    |||||||||||| ||||| ||||  ||||||||||||||||    
T  22197860 tgaatagaagacaagcgggcaacaagttgcaccgccaagcctttttggatgacaaaatcaattatcgtaaacacaacatt 22197939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 22239961 - 22239882
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || ||||||||||||||| ||| ||||    |||||||||||| ||||| ||||  ||||||||||||||||    
T  22239961 tgaatagaagacaagcgggcaacaagttgcaccgccaagcctttttggatgacaaaatcaattatcgtaaacacaacatt 22239882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 32336285 - 32336359
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||| ||| ||||||     ||||||||||||||||||| ||||| | || |||||||||||    
T  32336285 tgaatagaaggcaagcgggcaaaaagttgcgcc-----acctttttggatggcaaaatcaatctttgtgaacacaacatt 32336359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 27521385 - 27521423
Alignment:
Q  197 tttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  27521385 tttttcgatggcaaaatcaatcctcgtaaacacaacatt 27521423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 38839240 - 38839278
Alignment:
Q  197 tttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  38839240 tttttggatggtaaaaccaatcttcgtaaacacaacatt 38839278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 2904291 - 2904332
Alignment:
Q  194 acctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||| |||||||||||  ||||||||||||||||    
T  2904291 acctttttggatagcaaaaccaattatcgtaaacacaacatt 2904332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 9281331 - 9281291
Alignment:
Q  195 cctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||| ||||||||||| ||| |||||||||||||    
T  9281331 cctttttggattgcaaaaccaattctcctaaacacaacatt 9281291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 9292302 - 9292262
Alignment:
Q  195 cctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||| ||||||||||| ||| |||||||||||||    
T  9292302 cctttttggattgcaaaaccaattctcctaaacacaacatt 9292262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 23037457 - 23037493
Alignment:
Q  195 cctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  23037457 cctttttagatggcaaaatcaatcctcgtaaacacaa 23037493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 41370605 - 41370541
Alignment:
Q  171 cgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||| | ||||||||| | ||||||| |||| ||||||||||| | ||||| ||||||||    
T  41370605 cgggcaacaggttgcgccgctaggcctttttagatgccaaaaccaatcattgtaaaaacaacatt 41370541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 39434522 - 39434619
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| |||||||||||||||  ||  |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  39434522 ctatcaatattacttacacatgaataggaggc--gctagcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 39434619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 22589562 - 22589491
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  22589562 aggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacatt 22589491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 38815159 - 38815246
Alignment:
Q  148 cttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| |||||||||| ||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||||    
T  38815159 cttacacatgaatagaaggcaagcgggcaacaagctgcgccgctaagcctttttggatggaaaaaccaatcctcgtaaacacaacatt 38815246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 18804486 - 18804563
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaaca 233  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  18804486 tgaatagaaggcaagcaggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacaaaaca 18804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 44337194 - 44337272
Alignment:
Q  137 tatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaa 216  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  44337194 tatcaatattacttacacatgaataggaggcaagcgagcaacaagctg-gccgctggacctttttggatggcaaaaccaa 44337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 18596833 - 18596759
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacaca 230  Q
    ||||||| |||||||| | ||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  18596833 tgaatagaaggcaagctgacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtgaacaca 18596759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 42659080 - 42659179
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| ||| ||||||||||||||||| ||||||| |   ||| | |||||||||||||| |||||  |||||||||||||||||||||    
T  42659080 ctatcaatattacttacacaagaataggaggcaagcggacaacaagttataccgttagacctttttggatgacaaaattaatcctcgtaaacacaacatt 42659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 37514102 - 37514173
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||| | |||||||||| || ||||||||    
T  37514102 aggcaagcgggcaacaagctgcgccgttagacctttttgggtggcaagatcaatcctcgtgaatacaacatt 37514173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 3187861 - 3187922
Alignment:
Q  174 gcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| ||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  3187861 gcaataagctgcaccgttagacctttttggatggcaaaaccaattctcgtaaacacaacatt 3187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 4699760 - 4699823
Alignment:
Q  172 gggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||||||||||| ||   ||||||||||||||||||| |||||| ||||||||||||||    
T  4699760 gggcaacaagctgcgccactaagcctttttggatggcaaaactaatccttgtaaacacaacatt 4699823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 24320198 - 24320289
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||| ||| ||| |||||| || ||| | ||||||||||||| | ||| |||||||||||||  ||||| ||||||||||||||||||||||    
T  24320198 attaattacacacgaatagaagacaaacaggcaacaagctgcactgctagacctttttggatatcaaaatcaatcctcgtaaacacaacatt 24320289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 24350959 - 24350880
Alignment:
Q  153 acatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaac 232  Q
    |||||||||| ||  |||||||||||| |||| ||| || | | |||||||| |||||||||||||||||||||||||||    
T  24350959 acatgaatagaagataagcgggcaacaggctgggccactaggcttttttggagggcaaaaccaatcctcgtaaacacaac 24350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 6592472 - 6592528
Alignment:
Q  179 aagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| |||||| ||||||| |||||| |||||||||| |||||||||||||||||    
T  6592472 aagctgtgccgctagacctttctggatgacaaaaccaatactcgtaaacacaacatt 6592528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 500115 - 500194
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||||||||| |||||| ||||     |||||||| |||| |||| ||||||||||||||||||||||    
T  500115 tgaatagaaggcaagcgggcaataagctgtgccgtcaagcctttttgaatggtaaaatcaatcctcgtaaacacaacatt 500194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 8882235 - 8882296
Alignment:
Q  174 gcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||| |  || ||||| ||||||||||  |||||||||||||||||||||    
T  8882235 gcaacaagctgcgccgttaaacattttttgatggcaaaattaatcctcgtaaacacaacatt 8882296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 6618178 - 6618237
Alignment:
Q  176 aacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||| |||| | || ||||||||||| |||||||||| |||||||||| ||||||    
T  6618178 aacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacatt 6618237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 8228049 - 8227990
Alignment:
Q  176 aacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||| |  |  ||||||||| ||||||||| |||||||||||||||||||    
T  8228049 aacaagctgcgccgttaaatttttttggatagcaaaaccattcctcgtaaacacaacatt 8227990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 15566152 - 15566211
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaacca 215  Q
    ||||||| | ||||||||||||||| ||  |||||| ||| |||||||||||||||||||    
T  15566152 tgaatagaatgcaagcgggcaacaaactatgccgctagacttttttggatggcaaaacca 15566211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 28224853 - 28224952
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| | ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||| || |||||||||||||    
T  28224853 ctatcaatattacttacaaatgaataggagacaagcgggcaataagctgcgccgctagacctttttggatggcaaaacaaatcttcataaacacaacatt 28224952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 3208478 - 3208406
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaaca 228  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  3208478 tgaatagaaggcaagcgggcaacaagctgcgccgctaaacctttttggatggcaaaaccaatcctcgtaaaca 3208406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 27494172 - 27494259
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaa 231  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||  ||||||||||||    
T  27494172 attacttacatatgaataggaggcaagcaggcaacaagctgcgccgttagacctttttggatggcaaaaccaatattcgtaaacacaa 27494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 4413313 - 4413221
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||| ||| || ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||    
T  4413313 aattatttacacttgaatagaaggcaagtgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcatgaacacaacatt 4413221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 30602350 - 30602430
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgta 224  Q
    |||| ||| |||||||||| ||||| |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  30602350 attaattacacatgaatagaaggcatgcgggcaacaagctgcgctgctaggcctttttggatggcaaaaccaatcctcgta 30602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 41702133 - 41702209
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcct 220  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||| || | ||||||||||||||||||||||||||    
T  41702133 attacttacacatgaatagaaggcaagtgggcaacaagctgcgccactaggcctttttggatggcaaaaccaatcct 41702209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 9685641 - 9685570
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | || |||||||||||    
T  9685641 aggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaacaatctttgtgaacacaacatt 9685570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 17344511 - 17344590
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| |||||||| ||||||||||||||||| | ||||||||||||| | |||| ||||||||||||||||||||||    
T  17344511 tgaatagaaggcaagccggcaacaagctgcgccgatagacctttttggatcgaaaaatcaatcctcgtaaacacaacatt 17344590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 18745188 - 18745109
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  18745188 tgaatagaagacaagcgagcaataagctgcgccgctagacctttttggatggcaaaaccaatccttataaacacaacatt 18745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 41868141 - 41868063
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| | |||||||||||||||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  41868141 tgaatagaaagcaagcgggcaacaagttgcgccgctagatctttttgg-tggcaaaaccaatcctcgtaaacacaacatt 41868063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 15515373 - 15515302
Alignment:
Q  164 aggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||| | |||||||| |||||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  15515373 aggcaaacaggcaacaaactgcgccgctagacttttttggatggcaaaaccaatcctcgtgaacacaacatt 15515302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 11921436 - 11921359
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||| ||||||| ||||||||||| |||| || ||||||||||||| |||| |||||| ||||||||||||||    
T  11921436 aataggagggaagcgggtaacaagctgcgacgctagatctttttggatggcgaaactaatcctagtaaacacaacatt 11921359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 42122690 - 42122763
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacac 229  Q
    ||||||| |||||||||  ||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  42122690 tgaatagaaggcaagcgaacaataagctgcgccgctagacttttttggatggcaaaaccagtcctcgtaaacac 42122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 32612394 - 32612326
Alignment:
Q  158 aataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaa 226  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||||||||||    
T  32612394 aatagaaggcaagcgggcaacaaactgcgtcgccggaccttttcagatggcaaaaccaatcctcgtaaa 32612326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 13413224 - 13413303
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||| || ||||||| |||||||||| |||| | | ||||||||||||||||||||||| ||| |||||||||||||    
T  13413224 tgaatagaagacaagcggacaacaagctgagccgttaggcctttttggatggcaaaaccaattctcataaacacaacatt 13413303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 10587201 - 10587144
Alignment:
Q  144 attacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggaccttttt 201  Q
    |||||||| |||||||||| |||||| ||||||||||||| ||||||| |||||||||    
T  10587201 attacttacacatgaatagaaggcaaacgggcaacaagctacgccgctagaccttttt 10587144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 38724046 - 38723985
Alignment:
Q  136 ctatcaaaattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacct 197  Q
    ||||||| |||||||| |||| ||||||||||||||| |||||||||||| ||||| |||||    
T  38724046 ctatcaatattacttacacataaataggaggcaagcgagcaacaagctgcaccgctagacct 38723985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 2626094 - 2626002
Alignment:
Q  143 aattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||| ||| |||||||||| |||||||||| ||||||||||||||| | ||||||| | ||| |  |||  |||| ||||||||||||||||    
T  2626094 aattaattacacatgaatagaaggcaagcggacaacaagctgcgccgttagacctttgtagatagttaaattaatcttcgtaaacacaacatt 2626002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 20143179 - 20143119
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaa 216  Q
    ||||||| |||||| | | ||||||| ||||||||| ||||||||||||||||||||||||    
T  20143179 tgaatagaaggcaaacagacaacaagttgcgccgctagacctttttggatggcaaaaccaa 20143119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 27502209 - 27502314
Alignment:
Q  137 tatcaaaattacttatacatgaataggaggcaagcgg-------gcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacac 229  Q
    |||||| |||||||||||||||||| |||||| ||||       ||||  ||||| ||  || ||||||||||||| |||||| ||||| ||||||||||    
T  27502209 tatcaatattacttatacatgaataagaggcatgcggacaatgagcaatgagctgtgctactagacctttttggattgcaaaatcaatcttcgtaaacac 27502308  T
Q  230 aacatt 235  Q
    ||||||    
T  27502309 aacatt 27502314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 6761 - 6843
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatttat 238  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  6761 tgaatagaaggcaagcgggcaacaagctgcggcgctagacctttttggatggcaaaaccaattctcgtaaacacaacttttat 6843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 5197 - 5277
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacattt 236  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||    
T  5197 tgaatagaatgcaagcgggcaacaagctgcgccgctagacctttttggatggcaaagtcaatcctcgtgaacacaacattt 5277  T

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Target: scaffold0148 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 33123 - 33196
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacac 229  Q
    ||||||| |||||||| ||||||||||||| ||||    |||||||||||| ||||| ||||||||||||||||    
T  33123 tgaatagaaggcaagcaggcaacaagctgcaccgccaagcctttttggatgacaaaatcaatcctcgtaaacac 33196  T

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Target: scaffold1768 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 418 - 342
Alignment:
Q  156 tgaataggaggcaagcgggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaac 232  Q
    ||||||| ||| |||| ||||||||| |||||| |    ||||||||||||||||||| ||||||||||||||||||    
T  418 tgaatagaaggaaagccggcaacaagatgcgccacaaagcctttttggatggcaaaactaatcctcgtaaacacaac 342  T

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Target: scaffold0244 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 16872 - 16809
Alignment:
Q  172 gggcaacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    |||||||| ||||| ||||| |||||||||||||||||||| |||| ||||| || ||||||||    
T  16872 gggcaacatgctgcaccgctagacctttttggatggcaaaatcaattctcgtgaatacaacatt 16809  T

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Target: scaffold0470 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 7496 - 7555
Alignment:
Q  176 aacaagctgcgccgctggacctttttggatggcaaaaccaatcctcgtaaacacaacatt 235  Q
    ||||||||| |||| | || ||||||||||| |||||||||| |||||||||| ||||||    
T  7496 aacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacatt 7555  T

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