View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2121_low_2 (Length: 309)
Name: NF2121_low_2
Description: NF2121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2121_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 19 - 300
Target Start/End: Complemental strand, 36382087 - 36381806
Alignment:
| Q |
19 |
tttgggtcatcagatagcttctttaaaggttccttcatatctgggtgcacttttagttctagttctttaatctgaccaccccttccaaaaggatccactg |
118 |
Q |
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| T |
36382087 |
tttgggtcatcagatagcttctttaaaggttccttcatatctgggtgcacttttagttctagttctttaatctgaccaccccttccaaaaggatccactg |
36381988 |
T |
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| Q |
119 |
gttcagtaagagtggcattgaaaccctgcagtccaaaatagtggcaaaatggtataatgatagtgaaaaggaactataacaataccaagagagtgaaaca |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36381987 |
gttcagtaagagtggcattgaaaccctgcagtccaaaatagtggcaaaatggtataatgatagtgaaaaggaactataacaataccaagagagtgaaacc |
36381888 |
T |
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| Q |
219 |
agtcatgaccattatgaaaattaagtccacttcaaaaaacatcttctctttttctttgaacaatcattttcccaagaataat |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
36381887 |
agtcatgaccattatgaaaattaagtccacttcaaaaaacatcatctctttttctttgaacaatcattttcccaagaataat |
36381806 |
T |
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