View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21221_high_6 (Length: 236)

Name: NF21221_high_6
Description: NF21221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21221_high_6
NF21221_high_6
[»] chr1 (39 HSPs)
chr1 (1-224)||(29056381-29056606)
chr1 (113-224)||(36371474-36371584)
chr1 (112-224)||(33700734-33700845)
chr1 (115-224)||(8904418-8904526)
chr1 (120-224)||(9165164-9165267)
chr1 (113-221)||(11063563-11063670)
chr1 (113-217)||(8177144-8177247)
chr1 (113-225)||(14787298-14787409)
chr1 (148-224)||(15786317-15786392)
chr1 (146-224)||(17745251-17745328)
chr1 (113-223)||(21547442-21547551)
chr1 (147-224)||(50901585-50901662)
chr1 (113-221)||(10526830-10526937)
chr1 (113-188)||(2799901-2799976)
chr1 (146-224)||(4566552-4566629)
chr1 (146-224)||(31794259-31794336)
chr1 (179-224)||(18459259-18459304)
chr1 (145-221)||(6122801-6122876)
chr1 (113-188)||(1247152-1247227)
chr1 (149-224)||(16169976-16170050)
chr1 (113-188)||(40810506-40810581)
chr1 (146-221)||(51703786-51703860)
chr1 (147-224)||(2219976-2220052)
chr1 (149-225)||(24047100-24047175)
chr1 (149-201)||(43445989-43446041)
chr1 (149-221)||(52116779-52116850)
chr1 (146-197)||(3265954-3266005)
chr1 (147-198)||(12370192-12370243)
chr1 (149-224)||(19528325-19528399)
chr1 (146-224)||(15904614-15904692)
chr1 (150-224)||(40257403-40257476)
chr1 (149-198)||(17297013-17297062)
chr1 (147-224)||(34228878-34228953)
chr1 (150-223)||(37400279-37400351)
chr1 (146-218)||(6650605-6650676)
chr1 (149-221)||(17410238-17410309)
chr1 (150-224)||(21694450-21694520)
chr1 (150-186)||(23398981-23399017)
chr1 (149-201)||(31605846-31605898)
[»] chr7 (41 HSPs)
chr7 (113-224)||(43215188-43215298)
chr7 (113-224)||(26459372-26459482)
chr7 (113-224)||(39631848-39631958)
chr7 (113-224)||(17113799-17113909)
chr7 (113-218)||(2962469-2962573)
chr7 (135-224)||(23552122-23552210)
chr7 (149-225)||(42711961-42712036)
chr7 (113-224)||(17040974-17041084)
chr7 (129-224)||(18363700-18363794)
chr7 (149-224)||(20335829-20335903)
chr7 (149-224)||(22760867-22760941)
chr7 (150-224)||(39499718-39499791)
chr7 (146-221)||(7721376-7721450)
chr7 (113-199)||(29785263-29785349)
chr7 (147-224)||(2446312-2446388)
chr7 (160-224)||(25021344-25021407)
chr7 (148-224)||(30442492-30442567)
chr7 (150-224)||(41487366-41487436)
chr7 (149-221)||(43590914-43590985)
chr7 (113-224)||(5672531-5672641)
chr7 (113-224)||(5697583-5697693)
chr7 (113-224)||(15905636-15905745)
chr7 (113-188)||(37162312-37162387)
chr7 (147-185)||(48959240-48959278)
chr7 (146-223)||(41519259-41519335)
chr7 (112-224)||(24513801-24513912)
chr7 (146-214)||(33222384-33222451)
chr7 (113-201)||(37085511-37085599)
chr7 (113-224)||(23301564-23301674)
chr7 (113-220)||(25655190-25655296)
chr7 (125-224)||(33869419-33869517)
chr7 (161-224)||(42836011-42836073)
chr7 (113-224)||(45976885-45976995)
chr7 (146-224)||(4566423-4566500)
chr7 (147-201)||(5668567-5668621)
chr7 (146-224)||(30579339-30579416)
chr7 (147-221)||(35513473-35513546)
chr7 (120-201)||(11700191-11700271)
chr7 (116-197)||(21569997-21570078)
chr7 (149-222)||(21877814-21877886)
chr7 (148-201)||(29385740-29385793)
[»] chr8 (34 HSPs)
chr8 (113-224)||(18540302-18540412)
chr8 (147-224)||(3624584-3624660)
chr8 (149-224)||(16852344-16852418)
chr8 (149-224)||(19703485-19703559)
chr8 (161-224)||(2203496-2203558)
chr8 (149-224)||(28783064-28783138)
chr8 (145-224)||(44780108-44780186)
chr8 (147-201)||(34628668-34628722)
chr8 (147-224)||(968366-968442)
chr8 (145-221)||(11819783-11819858)
chr8 (113-185)||(31408084-31408156)
chr8 (113-201)||(33017240-33017327)
chr8 (113-224)||(6436517-6436627)
chr8 (113-224)||(8794308-8794417)
chr8 (113-200)||(27871695-27871782)
chr8 (150-224)||(18897170-18897243)
chr8 (146-224)||(23361644-23361721)
chr8 (145-199)||(27750758-27750812)
chr8 (146-224)||(30483879-30483956)
chr8 (113-210)||(6536538-6536634)
chr8 (113-224)||(6569733-6569843)
chr8 (129-224)||(12988432-12988526)
chr8 (146-217)||(35690059-35690129)
chr8 (149-188)||(36205234-36205273)
chr8 (148-221)||(3058046-3058118)
chr8 (147-224)||(8485003-8485079)
chr8 (151-224)||(29858049-29858121)
chr8 (147-224)||(35641897-35641973)
chr8 (145-182)||(43594312-43594349)
chr8 (152-193)||(45053493-45053533)
chr8 (113-224)||(20994419-20994530)
chr8 (156-224)||(26688869-26688936)
chr8 (148-224)||(29431015-29431090)
chr8 (149-201)||(30113039-30113091)
[»] chr6 (20 HSPs)
chr6 (113-224)||(12188265-12188375)
chr6 (147-224)||(33549108-33549184)
chr6 (113-188)||(15951264-15951339)
chr6 (151-225)||(10338174-10338247)
chr6 (113-186)||(6608078-6608150)
chr6 (149-221)||(21418477-21418548)
chr6 (149-224)||(14557966-14558040)
chr6 (134-201)||(20863401-20863468)
chr6 (161-224)||(31623001-31623063)
chr6 (113-171)||(11306136-11306194)
chr6 (147-189)||(20744505-20744547)
chr6 (150-224)||(30127404-30127477)
chr6 (113-186)||(98744-98817)
chr6 (149-186)||(346571-346608)
chr6 (147-200)||(19162810-19162863)
chr6 (148-197)||(23910108-23910157)
chr6 (149-224)||(22669-22743)
chr6 (116-224)||(22995000-22995107)
chr6 (116-224)||(23793293-23793400)
chr6 (148-224)||(32613137-32613212)
[»] chr4 (40 HSPs)
chr4 (113-224)||(7292760-7292870)
chr4 (120-224)||(37109320-37109423)
chr4 (113-201)||(23377982-23378070)
chr4 (113-224)||(31759620-31759730)
chr4 (146-224)||(37274454-37274532)
chr4 (113-221)||(44194946-44195053)
chr4 (113-211)||(38869785-38869882)
chr4 (144-225)||(13901745-13901825)
chr4 (113-216)||(15180753-15180852)
chr4 (146-224)||(2622390-2622471)
chr4 (113-219)||(2184994-2185099)
chr4 (146-224)||(7949449-7949526)
chr4 (113-183)||(20770955-20771025)
chr4 (147-221)||(49576890-49576963)
chr4 (147-211)||(13015444-13015507)
chr4 (149-201)||(46295123-46295175)
chr4 (113-216)||(4249189-4249291)
chr4 (145-224)||(8030198-8030276)
chr4 (149-224)||(19238575-19238649)
chr4 (113-224)||(19680750-19680860)
chr4 (113-175)||(24991579-24991641)
chr4 (120-185)||(20216153-20216217)
chr4 (113-197)||(11592115-11592199)
chr4 (149-201)||(32992638-32992690)
chr4 (168-224)||(33438495-33438550)
chr4 (113-201)||(33632098-33632186)
chr4 (149-224)||(20608926-20609000)
chr4 (149-224)||(37720212-37720286)
chr4 (149-224)||(39509074-39509148)
chr4 (149-224)||(55427198-55427272)
chr4 (150-224)||(13496245-13496318)
chr4 (147-201)||(24234671-24234725)
chr4 (146-224)||(46545715-46545792)
chr4 (148-225)||(4911229-4911305)
chr4 (113-210)||(16581711-16581807)
chr4 (148-197)||(19583150-19583199)
chr4 (135-224)||(29195099-29195186)
chr4 (151-224)||(31826613-31826685)
chr4 (150-199)||(46329192-46329241)
chr4 (151-224)||(51250522-51250594)
[»] chr5 (32 HSPs)
chr5 (124-224)||(26078024-26078123)
chr5 (126-224)||(34984810-34984907)
chr5 (149-224)||(30883196-30883270)
chr5 (146-224)||(25627061-25627138)
chr5 (113-177)||(16638865-16638929)
chr5 (125-224)||(14285165-14285263)
chr5 (129-224)||(21549115-21549209)
chr5 (113-224)||(22737086-22737196)
chr5 (146-224)||(12877697-12877774)
chr5 (152-225)||(16436621-16436692)
chr5 (113-224)||(7918431-7918541)
chr5 (113-224)||(16773811-16773921)
chr5 (146-224)||(29075785-29075862)
chr5 (113-202)||(2331950-2332038)
chr5 (120-224)||(18595970-18596073)
chr5 (113-201)||(25979196-25979284)
chr5 (149-224)||(16457814-16457888)
chr5 (148-221)||(1410657-1410728)
chr5 (113-198)||(39327053-39327137)
chr5 (149-200)||(84851-84902)
chr5 (113-180)||(2269186-2269253)
chr5 (145-224)||(17028258-17028336)
chr5 (129-224)||(19043462-19043556)
chr5 (146-221)||(41730549-41730623)
chr5 (147-185)||(11352025-11352063)
chr5 (146-224)||(21589292-21589369)
chr5 (113-175)||(30000168-30000230)
chr5 (146-188)||(43442235-43442277)
chr5 (147-224)||(8278271-8278347)
chr5 (113-221)||(17155831-17155936)
chr5 (146-199)||(31074260-31074313)
chr5 (113-186)||(37258328-37258401)
[»] chr3 (37 HSPs)
chr3 (120-224)||(53412949-53413052)
chr3 (113-224)||(10445101-10445212)
chr3 (113-224)||(46518632-46518742)
chr3 (113-220)||(30311314-30311420)
chr3 (145-224)||(36720385-36720463)
chr3 (113-224)||(37788428-37788537)
chr3 (146-224)||(27093356-27093433)
chr3 (113-224)||(15048023-15048133)
chr3 (113-224)||(28703366-28703476)
chr3 (146-224)||(16354887-16354964)
chr3 (147-224)||(14186652-14186727)
chr3 (113-186)||(33464504-33464576)
chr3 (145-217)||(32651432-32651503)
chr3 (116-216)||(37504341-37504440)
chr3 (113-188)||(37051256-37051331)
chr3 (146-224)||(4222145-4222222)
chr3 (151-224)||(8051218-8051290)
chr3 (145-221)||(8075121-8075196)
chr3 (149-201)||(16900679-16900731)
chr3 (125-201)||(27259187-27259263)
chr3 (147-226)||(4844507-4844585)
chr3 (147-226)||(4870203-4870281)
chr3 (146-224)||(8796088-8796164)
chr3 (113-224)||(26505323-26505433)
chr3 (113-200)||(44743817-44743904)
chr3 (149-224)||(47454615-47454689)
chr3 (152-221)||(8170679-8170747)
chr3 (151-224)||(27923043-27923115)
chr3 (146-191)||(36010778-36010823)
chr3 (147-224)||(47810740-47810816)
chr3 (145-221)||(2667869-2667944)
chr3 (132-188)||(3427534-3427590)
chr3 (152-220)||(12761520-12761587)
chr3 (149-201)||(14339636-14339688)
chr3 (149-201)||(47236969-47237021)
chr3 (152-188)||(49397542-49397578)
chr3 (149-201)||(54990728-54990780)
[»] chr2 (43 HSPs)
chr2 (148-224)||(42327392-42327467)
chr2 (113-224)||(19322772-19322882)
chr2 (113-221)||(13803502-13803609)
chr2 (113-224)||(42922418-42922529)
chr2 (149-224)||(23052521-23052595)
chr2 (149-224)||(29503275-29503349)
chr2 (146-224)||(11062364-11062441)
chr2 (147-221)||(23140908-23140981)
chr2 (147-221)||(23552698-23552771)
chr2 (113-174)||(2750588-2750649)
chr2 (113-210)||(30410511-30410607)
chr2 (120-224)||(19244113-19244216)
chr2 (113-224)||(4060176-4060286)
chr2 (149-220)||(21213777-21213847)
chr2 (149-224)||(37480079-37480153)
chr2 (147-224)||(42602558-42602634)
chr2 (120-224)||(40416359-40416462)
chr2 (114-186)||(45026784-45026856)
chr2 (113-224)||(4438941-4439051)
chr2 (151-222)||(12994376-12994446)
chr2 (113-224)||(34041550-34041660)
chr2 (146-224)||(1435068-1435144)
chr2 (146-224)||(1729820-1729897)
chr2 (147-201)||(4262298-4262352)
chr2 (146-224)||(11251091-11251168)
chr2 (146-224)||(16918573-16918650)
chr2 (152-221)||(17737625-17737692)
chr2 (145-221)||(21195670-21195745)
chr2 (113-184)||(1156476-1156546)
chr2 (129-224)||(5147657-5147751)
chr2 (145-184)||(6658425-6658464)
chr2 (149-224)||(19016035-19016109)
chr2 (113-224)||(37755933-37756043)
chr2 (149-224)||(39714996-39715070)
chr2 (150-224)||(32687485-32687558)
chr2 (146-220)||(33569853-33569927)
chr2 (150-196)||(33839259-33839305)
chr2 (113-186)||(2285264-2285336)
chr2 (147-224)||(7799031-7799107)
chr2 (149-219)||(12517751-12517823)
chr2 (152-224)||(28846695-28846766)
chr2 (149-201)||(30359680-30359731)
chr2 (149-201)||(31681075-31681127)
[»] scaffold0258 (1 HSPs)
scaffold0258 (147-224)||(15319-15395)
[»] scaffold0002 (1 HSPs)
scaffold0002 (146-224)||(94966-95043)
[»] scaffold0072 (1 HSPs)
scaffold0072 (113-186)||(16592-16664)
[»] scaffold0004 (1 HSPs)
scaffold0004 (113-225)||(81526-81637)
[»] scaffold0180 (1 HSPs)
scaffold0180 (146-217)||(19957-20027)
[»] scaffold0101 (1 HSPs)
scaffold0101 (151-201)||(43332-43382)
[»] scaffold0299 (1 HSPs)
scaffold0299 (146-222)||(11534-11609)
[»] scaffold0178 (1 HSPs)
scaffold0178 (148-224)||(6631-6706)
[»] scaffold0126 (1 HSPs)
scaffold0126 (146-218)||(25342-25413)
[»] scaffold0122 (1 HSPs)
scaffold0122 (153-221)||(6921-6988)
[»] scaffold0211 (1 HSPs)
scaffold0211 (113-224)||(24057-24167)
[»] scaffold0074 (1 HSPs)
scaffold0074 (146-197)||(45754-45805)
[»] scaffold0194 (1 HSPs)
scaffold0194 (147-201)||(13042-13096)
[»] scaffold0517 (1 HSPs)
scaffold0517 (150-223)||(7725-7797)
[»] scaffold0291 (1 HSPs)
scaffold0291 (149-221)||(2468-2539)


Alignment Details
Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 29056606 - 29056381
Alignment:
Q  1 ctagtgctcttaaaaatcaatactactatcattccaaatcttaatgtacat---cttcttcccaccttgaattatgaaacaagttcaattggagtagggt 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||||||    
T  29056606 ctagtgctcttaaaaatcaatactactatcattccaaatcttaatgtacatatgcttcttcccaccttgaattatgaaacaagttcaattagagtagggt 29056507  T
Q  98 annnnnnnnnnnnnaaagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 197  Q
    |             |||||||||||||||||||  | |||||||  | ||||| |||||||| ||| | ||| ||||  | |||||||||| |||||||     
T  29056506 a-ttttttttttttaaagaagttaaattaacccttttaaattggcatcagagataatcgaacctgaaaacttcaggatgagcacactcccaggtcccaaa 29056408  T
Q  198 ccaaataccactagaccaacccaagtg 224  Q
    |||||||||||| ||||||||||||||    
T  29056407 ccaaataccactggaccaacccaagtg 29056381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 36371584 - 36371474
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||  | |||||||||||||| | ||||||||||||| | |||||||||| || ||||||| |||||||||||     
T  36371584 aagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagcc-aataccactagg 36371486  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  36371485 ccaacccaagtg 36371474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 33700734 - 33700845
Alignment:
Q  112 aaagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 211  Q
    |||||||||||| ||||||||| |||||||    |||||||||||||| ||||||||||||||| | ||||||||||  | ||||||| |||||||||||    
T  33700734 aaagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagcc-aataccactag 33700832  T
Q  212 accaacccaagtg 224  Q
     ||||||||||||    
T  33700833 gccaacccaagtg 33700845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 8904526 - 8904418
Alignment:
Q  115 gaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacc 214  Q
    ||||||||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | ||||||| ||| ||||||| | ||||| ||||| ||    
T  8904526 gaagttaaactaaccccctcaaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtc-aatactactaggcc 8904428  T
Q  215 aacccaagtg 224  Q
    ||||||||||    
T  8904427 aacccaagtg 8904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 9165164 - 9165267
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 219  Q
    |||| |||||||||||||||||    ||||||||| |||| |||||| |||||||| | |||||||||| |||||||||| ||||||||||| |||||||    
T  9165164 taaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaaccc 9165262  T
Q  220 aagtg 224  Q
    |||||    
T  9165263 aagtg 9165267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 11063670 - 11063563
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||||||| |||||||||   ||||||||||||||| | ||||||||||||| ||||||||  || |||||||||| ||||||||||||    
T  11063670 aagaagctaaactaaccccttcaaattggcactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagcc-aataccactaga 11063572  T
Q  213 ccaacccaa 221  Q
     ||||||||    
T  11063571 tcaacccaa 11063563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 8177144 - 8177247
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| ||| ||||||||||| | ||||||||||  ||||||||| |||||||||||     
T  8177144 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagcc-aataccactagg 8177242  T
Q  213 ccaac 217  Q
    |||||    
T  8177243 ccaac 8177247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 14787298 - 14787409
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||| || |||||| | |||||||||||||||| ||| ||||||||||||||||||||| || ||| |||| | |||||||||||     
T  14787298 aagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtc-aataccactagg 14787396  T
Q  213 ccaacccaagtga 225  Q
     |||| |||||||    
T  14787397 tcaactcaagtga 14787409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 15786317 - 15786392
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||| ||||||||||||||| | ||||||||||  ||||||||| ||||| ||||||||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc-aatactactagaccaacccaagtg 15786392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 17745251 - 17745328
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||||||||||| |||||| | ||||| | || |||||||||| ||||||||||| ||||||||||||    
T  17745251 agagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagcc-aataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 21547442 - 21547551
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||| || ||| |  |||||||  | |||||||||||||| ||| |||| |||||| | ||| ||||||||||||||||| |||||||||||     
T  21547442 aagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagcc-aataccactagg 21547540  T
Q  213 ccaacccaagt 223  Q
    |||||||||||    
T  21547541 ccaacccaagt 21547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 50901662 - 50901585
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||  |||||||| |||||| | |||||| ||| |||||||||||| ||||||||| ||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtg 50901585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 10526937 - 10526830
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||||||||| | |||||||     |||||||||||||  ||||||||||||||| | || ||||||| |||||||||| ||||||||| ||    
T  10526937 aagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagcc-aataccactgga 10526839  T
Q  213 ccaacccaa 221  Q
    |||||||||    
T  10526838 ccaacccaa 10526830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 2799976 - 2799901
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | ||||||||||    
T  2799976 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactccca 2799901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 4566629 - 4566552
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| ||||||| ||||||| | |||||||||| || ||||||| |||| |||||| ||||||||||||    
T  4566629 agagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagcc-aatatcactaggccaacccaagtg 4566552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 31794259 - 31794336
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||| |||||||||   ||||||||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  31794259 agagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagcc-aataccactaggccaacccaagtg 31794336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 18459259 - 18459304
Alignment:
Q  179 cacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  18459259 cacactcccaagtcccaagccaattaccactagaccaacccaagtg 18459304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 6122876 - 6122801
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||  ||||||||||  ||||||||    
T  6122876 tagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaacccaa 6122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 1247227 - 1247152
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    |||||| |||| ||||||| ||||||||||   |||||||||||||| ||||||||||||||| |  |||||||||    
T  1247227 aagaagctaaaataaccccttcaaattggtaccagagagaatcgaacctgagaccttgaggaggagtacactccca 1247152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 16169976 - 16170050
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||| ||||||||||| |||||||||||| |||||||| | |||||||| || | ||||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtc-aataccaccaggctaacccaagtg 16170050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 40810581 - 40810506
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    |||||| |||| |||||| ||||||||||    |||||||||||||| ||||||||||| ||| ||||||||||||    
T  40810581 aagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactccca 40810506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 51703860 - 51703786
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||||| ||| || |||||||| | ||||||||||  | ||||||| |||||||||||||||||||||    
T  51703860 agagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagcc-aataccactagaccaacccaa 51703786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 2220052 - 2219976
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| |||||||| |||||||| ||||||  || || ||||||| |||||||| ||| |||||||||||    
T  2220052 gagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagcc-aataccaccagaacaacccaagtg 2219976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 24047100 - 24047175
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtga 225  Q
    ||||||||||| ||| |||| |||||| | |||||||||| ||| |||||| |||||||  ||||||||||||||||    
T  24047100 gagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagcc-aataccatgagaccaacccaagtga 24047175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 43446041 - 43445989
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||||||||||||||||| | |||||||| | | ||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaa 43445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 52116779 - 52116850
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||| |||| |||||| |||||||| | |||||||||| |||||||||| |||||||| || |||||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaa 52116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 3266005 - 3265954
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 197  Q
    |||||||||||||| ||||||||||||||| | |||||||||| || |||||    
T  3266005 agagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaag 3265954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 12370243 - 12370192
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagc 198  Q
    ||||||||| |||||||||||| |||||| | |||||||||| |||||||||    
T  12370243 gagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 19528325 - 19528399
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||||||||||| | |||||||  |  ||||||||| |||||||| || ||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagcc-aataccaccaggccaacccaagtg 19528399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 15904692 - 15904614
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||  |||||  |||||||| |  | ||||||| |||| ||||||| |||||||||||||||| |||||    
T  15904692 agagagaatcgaatctgagattttgaggaggaggatactcccaggtcctaagccaattaccactagaccaacctaagtg 15904614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 40257476 - 40257403
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||| |||| |||||||| |||||| | |||||||||| ||| |||||||| |||||| || ||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaa-taccaccaggccaacccaagtg 40257403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 17297062 - 17297013
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagc 198  Q
    ||||||| ||||||||||||||||||| | |||||||| | |||||||||    
T  17297062 gagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 34228953 - 34228878
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| ||| ||||||||||| ||| |||||||||| | |||||||||| || ||||| |||||||| ||||||    
T  34228953 gagagaatccaacctgagaccttga-gaggaacacactccgaggtcccaagcc-aacaccaccagaccaactcaagtg 34228878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 37400351 - 37400279
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagt 223  Q
    |||||||||| ||||||||| ||||| | ||||||  || ||| |||||||| |||||| ||||||||||||||    
T  37400351 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaa-taccaccagaccaacccaagt 37400279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 6650676 - 6650605
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacc 218  Q
    |||||||||||||| |||||| |||||||| | || ||||||   ||||||||| ||||||||||| ||||||    
T  6650676 agagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagcc-aataccactaggccaacc 6650605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 17410309 - 17410238
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||||||||| ||||| || |||||| | ||||||||||  |||||| || ||||||||||| |||||||||    
T  17410309 gagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaacc-aataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 21694520 - 21694450
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| |||||||||||||||   |||||||||| ||| |||||| |||||||| ||  |||||||||||    
T  21694520 agaatcgaacctgagaccttgaggag---cacactcccaagtctcaagcc-aataccaccaggtcaacccaagtg 21694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 23399017 - 23398981
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||||||| |||||||||||| |||||||||||||    
T  23399017 agaatcgaacttgagaccttgagaagaaacacactcc 23398981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 31605846 - 31605898
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| ||||||||||||||| | |||||| | | ||||||||||||    
T  31605846 gagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaa 31605898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 43215298 - 43215188
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||  | |||||||||||||| ||||||||||||||| | |||||||| | |||||||||| ||||||||||||    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagcc-aataccactaga 43215200  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  43215199 ccaacccaagtg 43215188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 26459372 - 26459482
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||||||| |||||||||    |||||||||||||| ||||||||||||||| | |||||||||| |||||||||| |||||||||||     
T  26459372 aagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactagg 26459470  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  26459471 ccaacccaagtg 26459482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 39631958 - 39631848
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | |  ||||||| |||||||||| |||||||||||     
T  39631958 aagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagcc-aataccactagg 39631860  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  39631859 ccaacccaagtg 39631848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 17113909 - 17113799
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||||||||||||||| |  | |||||||||||||| ||||||||||||||||| |||||||||| || | ||||| ||||| |||||     
T  17113909 aagaagctaaactaaccccctcaaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagcc-aatacaactagg 17113811  T
Q  213 ccaacccaagtg 224  Q
    ||| ||||||||    
T  17113810 ccaccccaagtg 17113799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 2962573 - 2962469
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||| |||| |||||||||||||   |||||||||||||| ||||| ||||||||| | ||||||| || || |||| || ||||||||||||    
T  2962573 aagaagttaaactaactccctcaaattggttccagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaacc-aataccactaga 2962475  T
Q  213 ccaacc 218  Q
    ||||||    
T  2962474 ccaacc 2962469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 23552210 - 23552122
Alignment:
Q  135 aaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||  |||||||||||||||| ||||||||||||||| | |||||||||| |||||||| | |||| |||||| ||||||||||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtc-aatagcactaggccaacccaagtg 23552122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 42712036 - 42711961
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtga 225  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||| | ||||||||||  |||||||||||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaag-ctaataccactaagccaacccaagtga 42711961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 17040974 - 17041084
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||||| |||| | ||||||||   | ||||||||||||| ||||||||||||||| | |||||| |||  ||||||||| ||| ||||||||    
T  17040974 aagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagcc-aatgccactaga 17041072  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  17041073 ccaacccaagtg 17041084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 18363794 - 18363700
Alignment:
Q  129 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||  ||||||||||| ||| ||||||||||||||| | ||||||||||  || ||||||  |||||||||| ||||||||||||    
T  18363794 cccctcaaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcc-tataccactaggccaacccaagtg 18363700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 20335829 - 20335903
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||| |||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagcc-aatacctctagaccaacccaagtg 20335903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 22760941 - 22760867
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||||||||||| | |||||||||| |||||||| | |||||||| |||||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtc-aataccaccagaccaacccaagtg 22760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 39499718 - 39499791
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||||||||| | ||| ||||||||| || |||||||||| ||||||||||| ||||||||||||    
T  39499718 agaatcgaacatgagaccttaaagaggaacacactcacaggtcccaagcc-aataccactaggccaacccaagtg 39499791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 7721450 - 7721376
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||||||||||||||||||||| |  ||||||||| ||||||| || ||||||||| ||||| |||||    
T  7721450 agagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaacc-aataccacttgaccaccccaa 7721376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 29785263 - 29785349
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcc 199  Q
    |||||| |||| |||||||||||||||||    ||| |||||||||||||||||||||||||| | |||||| |||  |||||||||    
T  29785263 aagaagctaaactaaccccctcaaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcc 29785349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 2446388 - 2446312
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| ||||| || |||||| | |||||||||| |||||||||| |||||||  |||||||||||||||    
T  2446388 gagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagcc-aataccatcagaccaacccaagtg 2446312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 25021344 - 25021407
Alignment:
Q  160 atgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||| |||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  25021344 atgagactttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 25021407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 30442567 - 30442492
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||| | ||||||||||||| | || ||||||| |||||||||| ||||||||| | ||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagcc-aataccactgggccaacccaagtg 30442492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 41487436 - 41487366
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| ||||||||||||||||   ||||||||| |||||||||| |||||||| || ||||||||||||    
T  41487436 agaatcgaacctgagaccttgaggaga---acactcccaagtcccaagcc-aataccaccaggccaacccaagtg 41487366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 43590985 - 43590914
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||||||||| |||||| |||||||| | |||||||||| |||||||||| |||||||| || |||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaa 43590914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 5672531 - 5672641
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||||||||  |||||||||||||||    || |||||||||||| ||||||||||||||  |||||||| ||| || ||||   |||||| ||||||    
T  5672531 aagaagttaaaccaaccccctcaaattgagactaaagagaatcgaacttgagaccttgaggaagaacacacttccaggtaccaa-ataaatacaactaga 5672629  T
Q  213 ccaacccaagtg 224  Q
    |||| |||||||    
T  5672630 ccaatccaagtg 5672641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 5697583 - 5697693
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||||||||  |||||||||||||||    || |||||||||||| ||||||||||||||  |||||||| ||| || ||||   |||||| ||||||    
T  5697583 aagaagttaaaccaaccccctcaaattgagactaaagagaatcgaacttgagaccttgaggaagaacacacttccaggtaccaa-ataaatacaactaga 5697681  T
Q  213 ccaacccaagtg 224  Q
    |||| |||||||    
T  5697682 ccaatccaagtg 5697693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 15905636 - 15905745
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||||||||| | |||||||   |||| ||||||||||| ||||||| | ||||| | |||||||||| |||||||||| |||||| | ||     
T  15905636 aagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagacc-taaggaggagcacactcccaggtcccaagcc-aataccgccagg 15905733  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  15905734 ccaacccaagtg 15905745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 37162312 - 37162387
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    |||||| |||| ||| |||||||||||||    |||||||||||||| |||||||||||| |||| ||||||||||    
T  37162312 aagaagctaaactaatcccctcaaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactccca 37162387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 48959278 - 48959240
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactc 185  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  48959278 gagagaatcgaacatgagaccttgaggaggaacacactc 48959240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 41519259 - 41519335
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagt 223  Q
    |||||||| ||||| ||||||||||||||| | |||||||| |  ||||||| | ||||||||||| |||||||||||    
T  41519259 agagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtc-aataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 24513912 - 24513801
Alignment:
Q  112 aaagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 211  Q
    ||||||||||||||| ||| | |||||||   | || || |||||||| ||||||||  |||||||  |||||||||  || |||||||| |||||||||    
T  24513912 aaagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaa-taccactag 24513814  T
Q  212 accaacccaagtg 224  Q
     ||||||||||||    
T  24513813 gccaacccaagtg 24513801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 33222451 - 33222384
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacc 214  Q
    |||||||||||||| ||||||||||||||  |  ||||| ||| |||||||||| ||||||||||||||    
T  33222451 agagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagcc-aataccactagacc 33222384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 37085511 - 37085599
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    |||||||||||||| ||| || |||||||| || | ||||||||||| ||| |||| |||||  | ||||||||||  |||||||||||    
T  37085511 aagaagttaaattagcccacttaaattggtattggggagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaa 37085599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 23301564 - 23301674
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||||||  || |||||||| |   || |||||||| ||| ||||||||  ||||| | |||||||||| |||||||| ||| |||||| ||     
T  23301564 aagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaa-taccaccagg 23301662  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  23301663 ccaacccaagtg 23301674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 25655190 - 25655296
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||  |||||| |||||||||    |||||||||||||| ||| ||||||||||| | ||||||| ||  ||||||| | |||||||||| |    
T  25655190 aagaagctaaaccaaccccttcaaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtc-aataccactaaa 25655288  T
Q  213 ccaaccca 220  Q
    ||||||||    
T  25655289 ccaaccca 25655296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 33869419 - 33869517
Alignment:
Q  125 taaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||||     ||||||||||||||  ||||||||||| || | |||||| ||| ||| |||||| ||||| ||||| ||||||||||||    
T  33869419 taaccccctcaaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagcc-aatactactaggccaacccaagtg 33869517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 42836011 - 42836073
Alignment:
Q  161 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||| |||||||||  | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  42836011 tgaggccttgaggaagagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 42836073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 45976885 - 45976995
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||||||||||||||  || |||||||  | ||||| ||  |||| | | ||||| ||||| | |||||||||| ||| |||||||| |||||||||     
T  45976885 aagaagttaaattaacctacttaaattggcatcagagataaatgaacttaaaaccttaaggaggagcacactcccaggtcacaagccaa-taccactagg 45976983  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  45976984 ccaacccaagtg 45976995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 4566423 - 4566500
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| ||| |||||||||||| || || ||||||| | |||| ||| | ||||||||||| ||||||||||||    
T  4566423 agagagaatcaaacctgagaccttgagaaggaatacactccaaggtccgaagtc-aataccactaggccaacccaagtg 4566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 5668567 - 5668621
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| | |||||||| |||||| | |||||| ||||||||||||||||    
T  5668567 gagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaa 5668621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 30579416 - 30579339
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||| |||||||| |||||||||||||||    ||||||||| ||| |||||| |||||||| || ||||||||||||    
T  30579416 agagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagcc-aataccaccaggccaacccaagtg 30579339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 35513546 - 35513473
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||| ||||||||||||||  | |||||| | ||||||| || |||||||| ||||||||||||| |||||||||    
T  35513546 gagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaag-caaataccactaggccaacccaa 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 11700271 - 11700191
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||| ||| |||||||||| |  |||||||||||||| ||||||||||||||| | || |||| || ||| ||||||||    
T  11700271 taaattagcccactcaaattgg-cacagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaa 11700191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 21569997 - 21570078
Alignment:
Q  116 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 197  Q
    |||||||| ||||||||||||||||     ||||| |||||||| ||||||||||||||| | | ||||| || ||||||||    
T  21569997 aagttaaactaaccccctcaaattgacaccagagaaaatcgaacttgagaccttgaggaggagcgcactctcaagtcccaag 21570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 21877886 - 21877814
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaag 222  Q
    ||||||||||| ||||||||| ||||| | ||| |||||| |||||||| | ||||||||||| ||||| ||||    
T  21877886 gagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtc-aataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 29385740 - 29385793
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    |||||||| ||| ||||||||||||||| | |||||||| | ||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaa 29385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 18540412 - 18540302
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||||||||| ||||||||||    |||||||||||||| |||||||||||||||||  ||||||||| |||||||||| |||||||||||     
T  18540412 aagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagcc-aataccactagg 18540314  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  18540313 ccaacccaagtg 18540302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 3624660 - 3624584
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| ||||||||||| ||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 3624584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 16852418 - 16852344
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 16852344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 19703485 - 19703559
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||||||||||| | ||||||| || |||||||||| ||||||||||| ||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagcc-aataccactaggccaacccaagtg 19703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 2203558 - 2203496
Alignment:
Q  161 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 2203496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 28783138 - 28783064
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||||||||||||||| | |||||||||| ||| |||||| |||||||| |  ||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagcc-aataccaccaagccaacccaagtg 28783064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 44780108 - 44780186
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||| ||||| ||| ||||||||||||||| | |||||||||| |||||||||| ||| ||||||| ||||||||||||    
T  44780108 tagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagcc-aatgccactaggccaacccaagtg 44780186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 34628722 - 34628668
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||| |||||| |||||||||||||||||||||  |||||||||||    
T  34628722 gagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagccaa 34628668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 968442 - 968366
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||||| || ||||| ||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccaggccaactcaagtg 968366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 11819858 - 11819783
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||  ||||||||||  ||||||||    
T  11819858 tagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaacccaa 11819783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 31408084 - 31408156
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactc 185  Q
    |||||| |||||||||||||| ||||||   |||||||||||||||| ||| ||||||||||| | |||||||    
T  31408084 aagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 33017327 - 33017240
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| ||||||| |||||||||    |||||||||||||| ||||||||||||||| | |||||| ||| || |||||||||    
T  33017327 aagaagttaaactaacccc-tcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaa 33017240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 6436517 - 6436627
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||||||||||||| |   ||||||||| | |||| ||||||||  |||||||||| |||| | |||||||| | |||||||||| |||||||| ||     
T  6436517 aagaagttaaattaactcatccaaattggtttcagagggaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagcc-aataccaccagg 6436615  T
Q  213 ccaacccaagtg 224  Q
     |||||||||||    
T  6436616 gcaacccaagtg 6436627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 8794308 - 8794417
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||||||||||| | ||||||||   |||||||||||||| ||||||| ||||||| | |||||| ||| || ||||||| ||||||||||      
T  8794308 aagaagctaaattaacccctt-aaattggtaccagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagcc-aataccactatg 8794405  T
Q  213 ccaacccaagtg 224  Q
    |||| |||||||    
T  8794406 ccaatccaagtg 8794417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 27871782 - 27871695
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 200  Q
    ||||||||||| || | | ||||||||| | |||||||||||||||| |||||| |||||||| |||| ||||| |  ||||||||||    
T  27871782 aagaagttaaactagctcactcaaattgatattagagagaatcgaacttgagactttgaggaggaacaaactccaagatcccaagcca 27871695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 18897243 - 18897170
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||||||||||||||| | |||||||  | ||||||| || || |||||||| ||||||||||||    
T  18897243 agaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaacc-aacaccactaggccaacccaagtg 18897170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 23361644 - 23361721
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| |||| ||||||||||||||| | ||||||||||| ||||||| | |||||||| ||  |||||||||||    
T  23361644 agagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtc-aataccaccaggtcaacccaagtg 23361721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 27750812 - 27750758
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcc 199  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||    
T  27750812 tagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 27750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 30483879 - 30483956
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| |||| ||||||  ||||||| | ||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  30483879 agagagaattgaacctgagactctgaggaggagcacactcccatatcccaagcc-aataccactgggccaacccaagtg 30483956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 6536634 - 6536538
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccacta 210  Q
    |||||| ||||||||||| |  |||||||    ||||||||| |||| ||||||||||||||| | |||||||| | |||||||||| ||||||||||    
T  6536634 aagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagcc-aataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 6569733 - 6569843
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||||||||||||||||     | |||||||||||||||| ||||  ||||| | ||||||||||  ||||||||| |||| ||||||     
T  6569733 aagaagctaaactaaccccctcaaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagcc-aatatcactagg 6569831  T
Q  213 ccaacccaagtg 224  Q
    |||||| |||||    
T  6569832 ccaacctaagtg 6569843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 12988526 - 12988432
Alignment:
Q  129 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||    |||||| ||||||| ||| ||||||||||| | |||||| ||| || ||||||| ||||||||||| |||| |||||||    
T  12988526 cccctcaaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagcc-aataccactaggccaatccaagtg 12988432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 35690059 - 35690129
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaac 217  Q
    |||||||||||||| ||||||||||||||| | || || ||||  ||||||||| ||||||||||| |||||    
T  35690059 agagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagcc-aataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 36205273 - 36205234
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactccca 36205234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 3058046 - 3058118
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||| ||||||||||  ||| | |||||||||| | ||||| || |||||||| ||||||||||||    
T  3058046 agagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaacc-aataccaccagaccaacccaa 3058118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 8485079 - 8485003
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||| |||||||||  | ||| | ||||||| || |||||||| |||||||||| || ||||||||||||    
T  8485079 gagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaag-caaataccaccaggccaacccaagtg 8485003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 29858049 - 29858121
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| |||||||| |||||| | |||||||||  |||||||||| |||||||| || |||| |||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagcc-aataccaccaggccaatccaagtg 29858121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 35641897 - 35641973
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| |||||| | |||||| | ||||||||||  || ||||||  ||||||| |||||||||||||||    
T  35641897 gagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagcc-gataccaccagaccaacccaagtg 35641973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 43594312 - 43594349
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacaca 182  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  43594312 tagagagaatcgaacctgagaccttgaggaggaacaca 43594349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 45053493 - 45053533
Alignment:
Q  152 aatcgaacatgagaccttgaggagaaacacactcccatgtcc 193  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  45053493 aatcgaac-tgagaccttgaggagaaacacactccaatgtcc 45053533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 20994419 - 20994530
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgagg-agaaacacactcccatgtcccaagccaaataccactag 211  Q
    |||||| ||||||| |||   |||||||||   ||||| |||||| | |||||| |||||| || | |||||||||| |||||||| ||| |||||||||    
T  20994419 aagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaa-taccactag 20994517  T
Q  212 accaacccaagtg 224  Q
     ||||||||||||    
T  20994518 gccaacccaagtg 20994530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 26688936 - 26688869
Alignment:
Q  156 gaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||| ||||||||||||||| | |||||||| | |||||||||| || ||||| || ||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagcc-aacaccaccaggccaacccaagtg 26688869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 29431090 - 29431015
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||| |||| |||  ||||| | |||||||||| |||||||||| |||||| | || ||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagcc-aataccgccaggccaacccaagtg 29431015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 30113091 - 30113039
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    |||||| |||||||| || |||||||||| || ||||||||||| ||||||||    
T  30113091 gagaatggaacatgacacattgaggagaagcatactcccatgtctcaagccaa 30113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 12188265 - 12188375
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||   ||||||||||||||| ||| ||||||||||| | |||||||||| |||||||||| |||||||||||     
T  12188265 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagcc-aataccactagg 12188363  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  12188364 ccaacccaagtg 12188375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 33549184 - 33549108
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||||| |||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccagaccaacccaagtg 33549108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 15951264 - 15951339
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    |||||| |||| |||||| |||||||||||   ||||||||| |||||||||||||||||||| | ||||||||||    
T  15951264 aagaagctaaactaaccctctcaaattggtaccagagagaattgaacatgagaccttgaggaggagcacactccca 15951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 10338174 - 10338247
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtga 225  Q
    ||||||||| ||||||||||||||| | |||||||| | |||||||||| |||||||| |  |||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagcc-aataccaccatgccaacccaagtga 10338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 6608078 - 6608150
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||||||||||| ||| ||||||||| | | || ||||||| |||||||||| ||||| |||||||||||||    
T  6608078 aagaagttaaattagcccactcaaattgatat-agggagaatcaaacatgagacattgagaagaaacacactcc 6608150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 21418548 - 21418477
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||||||||| |||||| | |||||| | |||||||||| |||||||||| |||||||| || |||||||||    
T  21418548 gagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaa 21418477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 14558040 - 14557966
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| |||||||  |||||| | |||||| ||| |||||||||| || ||||| |||||||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagcc-aacaccaccagaccaacccaagtg 14557966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 20863468 - 20863401
Alignment:
Q  134 caaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||  |||||||||||| ||  ||||||||||||||| | |||||||| | ||||||||||||    
T  20863468 caaattggcattagagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaa 20863401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 31623001 - 31623063
Alignment:
Q  161 tgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||| |||||| | |||||||||| |||||||||| ||||||||  ||||||||||||||    
T  31623001 tgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccggaccaacccaagtg 31623063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 11306136 - 11306194
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttga 171  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| |||||||||||    
T  11306136 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttga 11306194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 20744505 - 20744547
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccat 189  Q
    |||| |||||||||||||||||||||||| |||||||| ||||    
T  20744505 gagataatcgaacatgagaccttgaggaggaacacacttccat 20744547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 30127477 - 30127404
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| |||||||| || ||| | ||||||||||   |||||||||| |||||| |||||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaa-taccaccagaccaacccaagtg 30127404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 98817 - 98744
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||| |||| |||||| |||||||||   ||| ||| ||| |||| ||||||||||||||| ||||||||||    
T  98817 aagaagctaaactaaccctctcaaattgacattaaagataattgaacttgagaccttgaggaggaacacactcc 98744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 346608 - 346571
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  346608 gagaatcgaacatgagacctcgaggagaagcacactcc 346571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 19162863 - 19162810
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 200  Q
    ||||||||||||| ||||| || |||||| | ||||||||| ||||||||||||    
T  19162863 gagagaatcgaacctgagatctcgaggaggagcacactcccgtgtcccaagcca 19162810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 23910108 - 23910157
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 197  Q
    ||||| |||||| ||||||||||||||| | |||||||||| ||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 22669 - 22743
Alignment:
Q  149 gagaatcgaacatg-agaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||| ||||||| |||||||||| |||  |||||||| | ||||||||||||| |||||||| ||||||||||||    
T  22669 gagaattgaacatggagaccttgagaagag-cacactccaaggtcccaagccaaa-accactagcccaacccaagtg 22743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 22995000 - 22995107
Alignment:
Q  116 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacca 215  Q
    ||||||||||| ||| | | |||||||  | |||| ||||||||  ||||| |||||||||||||||||| || ||  |||| | |||||||| ||||||    
T  22995000 aagttaaattagcccacccgaattggtactggagaaaatcgaaccagagactttgaggagaaacacactcacaagtttcaagtc-aataccaccagacca 22995098  T
Q  216 acccaagtg 224  Q
    || ||||||    
T  22995099 actcaagtg 22995107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 23793400 - 23793293
Alignment:
Q  116 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacca 215  Q
    ||||||||||| ||| | | |||||||  | |||| ||||||||  ||||| |||||||||||||||||| || ||  |||| | |||||||| ||||||    
T  23793400 aagttaaattagcccacccgaattggtactggagaaaatcgaaccagagactttgaggagaaacacactcacaagtttcaagtc-aataccaccagacca 23793302  T
Q  216 acccaagtg 224  Q
    || ||||||    
T  23793301 actcaagtg 23793293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 32613137 - 32613212
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||||||| |||||| || | ||||||||||   |||||| | |||||||| || ||||||||||||    
T  32613137 agagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtc-aataccaccaggccaacccaagtg 32613212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 7292760 - 7292870
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||   ||||||||||||||| |||||| |||||||| | |||||||||| || ||||||| ||||||||||||    
T  7292760 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagcc-aataccactaga 7292858  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  7292859 ccaacccaagtg 7292870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 37109320 - 37109423
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 219  Q
    |||| |||||||||||||||||    |||||||||||||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||| |||||||    
T  37109320 taaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaaccc 37109418  T
Q  220 aagtg 224  Q
    |||||    
T  37109419 aagtg 37109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 23378070 - 23377982
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    |||||| |||| || ||||||||||||||   ||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||    
T  23378070 aagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaa 23377982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 31759620 - 31759730
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||| ||| ||||||||||   ||| |||||||||  ||||||||||||||| | |||||||||| |||||||||| ||||||||||||    
T  31759620 aagaagctaaactaatcccttcaaattggtaccagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagcc-aataccactaga 31759718  T
Q  213 ccaacccaagtg 224  Q
     |||||||||||    
T  31759719 tcaacccaagtg 31759730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 37274454 - 37274532
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| | ||||||||||||| | |||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  37274454 agagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtg 37274532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 44194946 - 44195053
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||| |||| ||||||||||||    ||||||||| ||||||||||||||||| ||||||||||| |||  | |||| || ||||||||| ||    
T  44194946 aagaagttaaactaactccctcaaattggcaccagagagaattgaacatgagaccttgagaagaaacacacttccagattccaaacc-aataccactgga 44195044  T
Q  213 ccaacccaa 221  Q
    |||||||||    
T  44195045 ccaacccaa 44195053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 38869882 - 38869785
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 211  Q
    |||||| |||| |||||||||||||||||    |||| ||||||||| ||||||||||||||| | ||||||||||  ||||||||| |||||||||||    
T  38869882 aagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc-aataccactag 38869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 13901825 - 13901745
Alignment:
Q  144 ttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtga 225  Q
    ||||| ||||| |||| ||||||||  ||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  13901825 ttagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagcc-aataccactagaccaacccaagtga 13901745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 15180852 - 15180753
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||    |||||||||||||| | |||||||||||||    ||||||||| |||||||||| ||||||||||||    
T  15180852 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggag---tacactcccaggtcccaagcc-aataccactaga 15180757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 2622390 - 2622471
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca---aataccactagaccaacccaagtg 224  Q
    |||||||||||||| |||||| | |||||| | |||||||||| |||||||||||   ||||||||||| ||||||||||||    
T  2622390 agagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtg 2622471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 2184994 - 2185099
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||  |  ||||||||||||| |||||| ||||| || | |||||||||| || ||||||| | |||||||||     
T  2184994 aagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagcc-attaccactagg 2185092  T
Q  213 ccaaccc 219  Q
    |||||||    
T  2185093 ccaaccc 2185099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 7949449 - 7949526
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| ||||||||||||||| | |||||||| | |||||||||| |||||| |||| ||| ||||||||    
T  7949449 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagcc-aataccgctaggccagcccaagtg 7949526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 20771025 - 20770955
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacac 183  Q
    |||||||||||||||||||||||||||||     ||||||||||||| |||||||||||| || |||||||    
T  20771025 aagaagttaaattaaccccctcaaattggcacctgagagaatcgaacttgagaccttgagaaggaacacac 20770955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 49576890 - 49576963
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||||||||||| ||||||||||||||| | |||||||||| |||| ||||| |||||||| || |||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagcc-aataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 13015507 - 13015444
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactag 211  Q
    |||||||||||||||||||| | |||||| | |||||||||| |||||||||| |||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagcc-aataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 46295175 - 46295123
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 4249291 - 4249189
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||    |||||||||| ||| ||||||||||||||| | |||||||| |  |||||||||  ||||||||||     
T  4249291 aagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcc-tataccactagg 4249193  T
Q  213 ccaa 216  Q
    ||||    
T  4249192 ccaa 4249189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 8030198 - 8030276
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||  ||||||||||  ||| |||||||    
T  8030198 tagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaatccaagtg 8030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 19238575 - 19238649
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||  ||||||| |||||| | |||||||||| |||||||||| |||||||| || ||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagcc-aataccaccaggccaacccaagtg 19238649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 19680750 - 19680860
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||||| ||| |||||||    |||||||||||||| | ||||||||||||  | |||||||||| |||||||| | |||||||||||     
T  19680750 aagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaag-cgaataccactagg 19680848  T
Q  213 ccaacccaagtg 224  Q
    |||| |||||||    
T  19680849 ccaatccaagtg 19680860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 24991641 - 24991579
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggag 175  Q
    ||||||||||| |||| |||||||||| ||  |||||| |||||||| |||||||||||||||    
T  24991641 aagaagttaaactaactccctcaaattagtactagagaaaatcgaacctgagaccttgaggag 24991579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 20216217 - 20216153
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactc 185  Q
    ||||||||||||| |||||||   || || ||||||||||||||||| ||||||||||||||||||    
T  20216217 taaattaaccccc-caaattgacattggaaagaatcgaacatgagactttgaggagaaacacactc 20216153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 11592115 - 11592199
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 197  Q
    |||||||||||||||||  |||||||||||   ||||| |||||||| | |||||| |||||| | ||||||| || ||||||||    
T  11592115 aagaagttaaattaaccaactcaaattggttccagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaag 11592199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 32992690 - 32992638
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 33438495 - 33438550
Alignment:
Q  168 ttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| ||| ||| || ||||||||| ||||||||||||||||||||||    
T  33438495 ttgaggagaaacatacttccaggttccaagccaa-taccactagaccaacccaagtg 33438550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 33632098 - 33632186
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| ||||||||||||||||     |||||||||||| | || |||||||||||| | || |||||||| | |||||||||    
T  33632098 aagaagttaaactaaccccctcaaattgacaccagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaa 33632186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 20609000 - 20608926
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||||||| |||||||||||||||   || |||||| |||||||  ||| |||||||||||    
T  20609000 gagaatcgaacttgagaccttgatgagaaacacactcccggatctcaagcc-aataccatcagatcaacccaagtg 20608926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 37720212 - 37720286
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| || ||||||||||||   |||||||||| |||||||||| |||| ||| || ||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagcc-aataacaccaggccaacccaagtg 37720286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 39509148 - 39509074
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| |||||||| |||||| | ||||||||||  ||||||||| | |||||  |||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcc-attaccatgagaccaacccaagtg 39509074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 55427198 - 55427272
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| |||||||| ||| || | || ||||||| |||||||||| |||||||| || ||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagcc-aataccaccaggccaacccaagtg 55427272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 13496318 - 13496245
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||| || ||| ||||||||| ||||||||||| | |||||||| |  ||||||||||||    
T  13496318 agaatcgaacacgagacctcgaagaggaacacactcacatgtcccaagtc-aataccaccatgccaacccaagtg 13496245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 24234725 - 24234671
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||| ||||||||| ||||  | |||||||||| ||||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaa 24234671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 46545792 - 46545715
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||| |||||||  ||||| ||||||||| | ||||||| || ||| |||||||| ||||||||| ||||||||||||    
T  46545792 agagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaa-taccactaggccaacccaagtg 46545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 4911229 - 4911305
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtga 225  Q
    ||||||||||| |||| || ||||| || | |||||||| | ||||||||| || |||||| ||||||||||||||||    
T  4911229 agagaatcgaatatgaaacgttgagtaggagcacactcctaagtcccaagctaa-taccaccagaccaacccaagtga 4911305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 16581807 - 16581711
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccacta 210  Q
    |||||| |||| |||||| ||||||||||    ||||| ||| |||| ||||||||||||||| | || ||||||| || ||||||| ||||||||||    
T  16581807 aagaagctaaactaaccctctcaaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagcc-aataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 19583150 - 19583199
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 197  Q
    |||||||||||| ||||| ||| |||||||||||||| ||| ||||||||    
T  19583150 agagaatcgaacttgagatcttaaggagaaacacactaccaagtcccaag 19583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 29195186 - 29195099
Alignment:
Q  135 aaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||  |||||||||||||||| || |||||||| ||| | |||||||| | |||||||||| || ||||| || ||||||||||||    
T  29195186 aaattggcattagagagaatcgaacttgcgaccttga-gaggagcacactccaaggtcccaagcc-aacaccaccaggccaacccaagtg 29195099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 31826685 - 31826613
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| ||||||||||||||| | ||||||| ||  |||||||||  ||||||||||  |||||||||||    
T  31826685 gaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcc-tataccactagggcaacccaagtg 31826613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 46329241 - 46329192
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcc 199  Q
    |||||||||| ||| ||||||||||| | |||||||||| ||||||||||    
T  46329241 agaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 51250522 - 51250594
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| ||||| ||||||| | | ||||||||||  ||||||||| |||||||| || ||||||||||||    
T  51250522 gaatcgaacttgagatcttgaggcggagcacactcccagatcccaagcc-aataccaccaggccaacccaagtg 51250594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 26078024 - 26078123
Alignment:
Q  124 ttaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagt 223  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| ||||| || ||||||| ||||||| || ||||||||||| |||||||||||    
T  26078024 ttaaccccctcaaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaacc-aataccactaggccaacccaagt 26078122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 34984907 - 34984810
Alignment:
Q  126 aaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||||    |||||||||||||| | ||||||||||||| | |||||||||| || ||||||| ||||||||||||||||||||||||    
T  34984907 aaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagcc-aataccactagaccaacccaagtg 34984810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 30883196 - 30883270
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||| |||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactagaccaacccaagtg 30883270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 25627138 - 25627061
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| ||||||||||||||| | |||||||||| || ||||||| ||||||||||| ||||||||||||    
T  25627138 agagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcc-aataccactaggccaacccaagtg 25627061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 16638929 - 16638865
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaa 177  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||| |||||    
T  16638929 aagaagttaaattaaccctctcaaattggtataagagagaatcgaacatgagatcttgaagagaa 16638865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 14285263 - 14285165
Alignment:
Q  125 taaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||||||    |||||||||||||| ||||||||||||||| | |||||||||| || ||||||| ||| ||||| | ||||||||||||    
T  14285263 taaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagcc-aattccactcggccaacccaagtg 14285165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 21549115 - 21549209
Alignment:
Q  129 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||   |||||| |||||||| |||||| || ||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  21549115 cccctcaaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 21549209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 22737196 - 22737086
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||||||||| |  |||||| | | |||| ||||||||| |||||| ||| |||| | |||||| ||| |||||||||| ||||||||||||    
T  22737196 aagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagcc-aataccactaga 22737098  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  22737097 ccaacccaagtg 22737086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 12877774 - 12877697
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| |||||| |||||||||||||||||||||  |||||| || ||| ||||||||||||| ||||||    
T  12877774 agagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaacc-aatgccactagaccaactcaagtg 12877697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 16436692 - 16436621
Alignment:
Q  152 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtga 225  Q
    |||||||||||||||||||||||| | |||||| ||| |||||||||| ||||||||||| |||||||||||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacact-ccaagtcccaagcc-aataccactaggccaacccaagtga 16436621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 7918431 - 7918541
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||| |||||||||||||    |||||||||||||| | ||||||||||||| |   |||||||| || ||||||| |||||||||||     
T  7918431 aagaagctaaactaaacccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagcc-aataccactagg 7918529  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  7918530 ccaacccaagtg 7918541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 16773921 - 16773811
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||||| ||| |  |||||||  | |||||||||||||| |||||||| |||||| | |||||||||| |||||||| | |||||||| |||    
T  16773921 aagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtc-aataccaccaga 16773823  T
Q  213 ccaacccaagtg 224  Q
    ||||| ||||||    
T  16773822 ccaactcaagtg 16773811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 29075862 - 29075785
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||||||||| || |||||| | ||||||||||  ||||||||| ||||||||||| | ||||||||||    
T  29075862 agagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagcc-aataccactaggcaaacccaagtg 29075785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 2331950 - 2332038
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaa 202  Q
    |||||||||||||| ||| |||||||||  | ||| ||||||| |||||||||||||||| | ||||||||||| |  ||||||||||||    
T  2331950 aagaagttaaattagcccactcaaattga-catagggagaatcaaacatgagaccttgagaaaaaacacactccaagatcccaagccaaa 2332038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 18595970 - 18596073
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 219  Q
    |||| |||||||||||||||||    ||||| |||||||| | ||||||||||||| | |||| ||||| ||| |||||| |||||||||||| ||| ||    
T  18595970 taaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagcc-aataccactagatcaatcc 18596068  T
Q  220 aagtg 224  Q
    |||||    
T  18596069 aagtg 18596073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 25979284 - 25979196
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    |||||| |||||||||||| ||||||||   | |||||||||||||| ||||||||||||||| |  |||||||||  | |||||||||    
T  25979284 aagaagctaaattaaccccatcaaattgacataagagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaa 25979196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 16457888 - 16457814
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||| |||||||||||||||||||| | |||||||| | |||||||||| |||||||| || |||||| |||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagcc-aataccaccaggccaacctaagtg 16457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 1410657 - 1410728
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||| |||||||| |||||| | ||||||||||| ||||||| | |||||||| ||||||||||||    
T  1410657 agagaatcgaac-tgagacctcgaggaggagcacactcccatatcccaagtc-aataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 39327053 - 39327137
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagc 198  Q
    |||||| ||||||| ||| | |||||| || || ||||||||||||  | ||||||||||||| | ||||||||||||||||||||    
T  39327053 aagaagctaaattagcccac-caaattagtattggagagaatcgaagctaagaccttgaggaggagcacactcccatgtcccaagc 39327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 84902 - 84851
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 200  Q
    ||||||||||| ||||||||||||||| | ||||||||||  ||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 2269186 - 2269253
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaaca 180  Q
    |||||| |||| |||||||||||||||| | | ||||| |||||||  ||||||||||||||| ||||    
T  2269186 aagaagctaaaataaccccctcaaattgttatcagagataatcgaatttgagaccttgaggaggaaca 2269253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 17028258 - 17028336
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||| ||||| ||| ||||||||||||||| | |||||||||| ||||||| || ||||| |||||  |||||||||||    
T  17028258 tagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaa-cccaatacaactaggtcaacccaagtg 17028336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 19043556 - 19043462
Alignment:
Q  129 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||   ||||||| || |||| |||||| ||||| || |||||||||||| || ||||| | |||| |||||| ||||||||||||    
T  19043556 cccctcaaattggcactagagaggattgaacctgagactttgagaaggaacacactcccaagttccaagtc-aatagcactaggccaacccaagtg 19043462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 41730623 - 41730549
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||||||||| ||||||||| | | |||||||| |||| |||| |  ||||||||||| |||||||||    
T  41730623 agagagaatcgaacatgataccttgaggtggagcacactccaatgttccaa-ctcaataccactaggccaacccaa 41730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 11352063 - 11352025
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactc 185  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  11352063 gagagaatcgaacttgagacattgaggagaaacacactc 11352025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 21589369 - 21589292
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||| ||||||||| |||||| | |||||| | || ||||||| |||||||||| |||||||| || ||||||||||||    
T  21589369 agagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagcc-aataccaccaggccaacccaagtg 21589292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 30000230 - 30000168
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggag 175  Q
    |||||||||||||||||| || |||||||  | ||||||| |||||| |||||||| ||||||    
T  30000230 aagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgaggag 30000168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 43442277 - 43442235
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    |||||||||||||| ||||||||||||||| | ||||||||||    
T  43442277 agagagaatcgaacctgagaccttgaggaggagcacactccca 43442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 8278271 - 8278347
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||| |||| ||| ||||| || |||||| | |||||||||| |||||||||| |||||||  |||||||||||||||    
T  8278271 gagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagcc-aataccatcagaccaacccaagtg 8278347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 17155936 - 17155831
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||||||||||| ||| ||||||||||    | |||||||| ||| ||||||||||||||| |   ||||| || ||||||| || |||||||||| |    
T  17155936 aagaagttaaattagcccactcaaattggcagcacagagaatcaaacctgagaccttgaggagga--gcactctcaggtcccaaacc-aataccactaaa 17155840  T
Q  213 ccaacccaa 221  Q
    |||||||||    
T  17155839 ccaacccaa 17155831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 31074313 - 31074260
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcc 199  Q
    |||||||||||||| ||||| ||||||||| |||||||||| |  |||||||||    
T  31074313 agagagaatcgaacctgagatcttgaggaggaacacactccaaaatcccaagcc 31074260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 37258328 - 37258401
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||| |||| ||||||||||||||||     |||||||||||||| ||| ||||||||||| | ||||||||    
T  37258328 aagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactcc 37258401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 53413052 - 53412949
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 219  Q
    |||| |||||||||||||||||    ||||||||| |||| ||||||||||||||| | |||||||||| ||  |||||| |||||||||||||||||||    
T  53413052 taaactaaccccctcaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagcc-aataccactagaccaaccc 53412954  T
Q  220 aagtg 224  Q
    |||||    
T  53412953 aagtg 53412949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 10445101 - 10445212
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||||| ||| |||||||| |    |||||||||||||| |||||||| |||||| | |||||||||| |||||||||||| | |||||||     
T  10445101 aagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactagg 10445200  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  10445201 ccaacccaagtg 10445212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 46518742 - 46518632
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||  | |||||||||| ||| ||| ||||||||||| | ||||||||||  ||||||||| ||||||||||      
T  46518742 aagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagcc-aataccactatg 46518644  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  46518643 ccaacccaagtg 46518632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 30311420 - 30311314
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||    | |||||||||||| ||||||||||||||| | ||||||||||  |||||||||  ||||||||||     
T  30311420 aagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc-tataccactagg 30311322  T
Q  213 ccaaccca 220  Q
    ||||||||    
T  30311321 ccaaccca 30311314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 36720463 - 36720385
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||| ||| |||| |||||| | ||||||||||| ||||||||| |||||||| |||||||||||||||    
T  36720463 tagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagcc-aataccaccagaccaacccaagtg 36720385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 37788428 - 37788537
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||||||||||| |||||||||   ||||||||||||||| ||||||||||||||| | |||||||| | || ||||| | ||||||||| |     
T  37788428 aagaagctaaattaacccc-tcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtc-aataccactggg 37788525  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  37788526 ccaacccaagtg 37788537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 27093356 - 27093433
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| ||| ||||||||||||||| | |||||||||| || ||||||| ||||||||||| ||||||||||||    
T  27093356 agagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagcc-aataccactaggccaacccaagtg 27093433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 15048023 - 15048133
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||| |||||||||||||||||    ||||| |||||||| ||||||||||||||| | |||| |||||  |||||||||  |||||| ||      
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcc-tataccattaag 15048121  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  15048122 ccaacccaagtg 15048133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 28703366 - 28703476
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||||| |||||||||||    |||||||||||||| ||||||||||| ||| | ||||||||||  ||||||| | |||| |||| ||    
T  28703366 aagaagctaaactaacctcctcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag-ctaatatcactgga 28703464  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  28703465 ccaacccaagtg 28703476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 16354887 - 16354964
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| ||||||| ||||||| | ||||||| || || ||||||| ||||||||||| ||||||||||||    
T  16354887 agagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagcc-aataccactaggccaacccaagtg 16354964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 14186727 - 14186652
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| ||||||||||||||| | |||||| ||| |||||||| | ||||||||||| ||||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagac-aataccactaggccaacccaagtg 14186652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 33464576 - 33464504
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||||||||||| ||| ||||||||| | | || ||||||| |||||||||||||||| |||||||||||||    
T  33464576 aagaagttaaattagcccactcaaattgatat-agggagaatcaaacatgagaccttgagaagaaacacactcc 33464504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 32651432 - 32651503
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaac 217  Q
    ||||||||||||||  ||||| ||||||||| | |||||||||| |||||||||| ||||||||||| |||||    
T  32651432 tagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 37504341 - 37504440
Alignment:
Q  116 aagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagacca 215  Q
    ||||||||||| ||| ||||||||||| | ||||| |||||||| | ||||||| |||||| ||| ||||||| ||  |||||| ||||||||||| |||    
T  37504341 aagttaaattagcccactcaaattggtttcagagataatcgaacctcagaccttaaggagagacatactcccaagtttcaagcc-aataccactaggcca 37504439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 37051256 - 37051331
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    |||||| |||| |||||||||||||| |||   |||||||||||||| |||||| || ||||| ||||||||||||    
T  37051256 aagaagctaaactaaccccctcaaatcggtgcaagagagaatcgaacctgagactttaaggaggaacacactccca 37051331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 4222222 - 4222145
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| | |||| |||||||| | ||||||||||  ||||||||| ||||||||||  ||||||||||||    
T  4222222 agagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagcc-aataccactaagccaacccaagtg 4222145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 8051290 - 8051218
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| |||||||| |||||||| || ||| ||| |||||||||| |||||||| || ||||||||||||    
T  8051290 gaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagcc-aataccaccaggccaacccaagtg 8051218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 8075121 - 8075196
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||| ||||||||| ||| ||||||||||| | |||||||||| ||||||||||  ||||||||||  ||||||||    
T  8075121 tagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcc-tataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 16900679 - 16900731
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||||||||||||| ||| | |||||||| | ||||||||||||    
T  16900679 gagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagccaa 16900731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 27259263 - 27259187
Alignment:
Q  125 taaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||||||   | |||||||||| ||| ||| |||| |||||| | |||||||||| ||||||||||||    
T  27259263 taaccccctcaaattgacatcagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaa 27259187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 4844507 - 4844585
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgat 226  Q
    ||||||||||| | |||||||| |||||| | ||||||||||  ||||||| | |||||||| |||||||||||| ||||    
T  4844507 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtc-aataccaccagaccaacccaaatgat 4844585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 4870203 - 4870281
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtgat 226  Q
    ||||||||||| | |||||||| |||||| | ||||||||||  ||||||| | |||||||| |||||||||||| ||||    
T  4870203 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtc-aataccaccagaccaacccaaatgat 4870281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 8796088 - 8796164
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| ||||||||||||||| | || ||||||| | |||  ||  ||||||||||| ||||||||||||    
T  8796088 agagagaatcgaacttgagaccttgaggaggagcatactcccaagcccccggc--aataccactaggccaacccaagtg 8796164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 26505323 - 26505433
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||| ||||||||| ||||||||   |||||||||  ||| | ||| ||||| ||| | |||||| |||| |||||||||  |||||||| ||    
T  26505323 aagaagttaaactaaccccctgaaattggtaccagagagaattcaacctcagatcttgaagaggagcacacttccatatcccaagcc-tataccactgga 26505421  T
Q  213 ccaacccaagtg 224  Q
    |||| |||||||    
T  26505422 ccaatccaagtg 26505433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 44743817 - 44743904
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca 200  Q
    |||||| ||||||||||| | ||||||||   | |||| |||||||| |||||||| |||||| | ||||||||||  ||||||||||    
T  44743817 aagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 47454615 - 47454689
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| |||||||| |||||| | |||||||| |  || |||||| |||||||||||| |||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagcc-aataccactagaacaacccaagtg 47454689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 8170747 - 8170679
Alignment:
Q  152 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||| |||||||||||| || | |||||||||| ||  |||||| ||||||||||| |||||||||    
T  8170747 aatcgaacctgagaccttgagtaggagcacactcccaagtttcaagcc-aataccactaggccaacccaa 8170679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 27923043 - 27923115
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| ||||||  ||||||| | |||||| |||||||||||||| |||||||| || |||||| |||||    
T  27923043 gaatcgaacctgagactatgaggaggagcacacttccatgtcccaagcc-aataccaccaggccaacctaagtg 27923115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 36010823 - 36010778
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgt 191  Q
    |||||||||||||| |||||| |||||||| | |||||||||||||    
T  36010823 agagagaatcgaacttgagactttgaggaggagcacactcccatgt 36010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 47810740 - 47810816
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| |||  ||||||||| |||| | |||||||||| | || ||||||| |||||| |||||||||||||||    
T  47810740 gagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaa-taccaccagaccaacccaagtg 47810816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 2667944 - 2667869
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||| |||||||| |||||||| |||||  | ||||||||||  ||||||||| |||||||| || |||||||||    
T  2667944 tagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagcc-aataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 3427534 - 3427590
Alignment:
Q  132 ctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactccca 188  Q
    ||||||||||   ||||||||||||||  ||||||||||||||| | ||||||||||    
T  3427534 ctcaaattggcactagagagaatcgaatctgagaccttgaggaggagcacactccca 3427590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 12761587 - 12761520
Alignment:
Q  152 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccca 220  Q
    |||||||| ||||| ||  ||||| |||||||||||| |||||||| | |||||||| |||||||||||    
T  12761587 aatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtc-aataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 14339688 - 14339636
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| |||||| |||||||| | ||||||||||  |||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaa 14339636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 47236969 - 47237021
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||||||||||||| ||| | |||||||||  ||||||| ||||    
T  47236969 gagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaa 47237021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 49397542 - 49397578
Alignment:
Q  152 aatcgaacatgagaccttgaggagaaacacactccca 188  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  49397542 aatcgaacatgagacctcgaggagaagcacactccca 49397578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 54990780 - 54990728
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| ||||||||||||||| | ||| |||| | ||||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 42327392 - 42327467
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 42327467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 19322882 - 19322772
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||| ||||| |||||||||||   ||||||||||| |||  |||||||||| ||| | |||||||||| ||||||| || ||||||||||||    
T  19322882 aagaagttaaactaacctcctcaaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaacc-aataccactaga 19322784  T
Q  213 ccaacccaagtg 224  Q
     |||||||||||    
T  19322783 tcaacccaagtg 19322772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 13803609 - 13803502
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||  | ||||| |||||||| ||||||||||||||| | |||||||| | ||| |||||| |||| |||||||    
T  13803609 aagaaggtaaactaaccccctcaaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagcc-aatatcactaga 13803511  T
Q  213 ccaacccaa 221  Q
     ||||||||    
T  13803510 tcaacccaa 13803502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 42922529 - 42922418
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagacctt-gaggagaaacacactcccatgtcccaagccaaataccactag 211  Q
    |||||| |||| ||||||| |||||||||    |||||||||||||| ||||||||| |||||| | |||||||||| || ||||||||| |||||||||    
T  42922529 aagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaa-taccactag 42922431  T
Q  212 accaacccaagtg 224  Q
     ||||||||||||    
T  42922430 gccaacccaagtg 42922418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 23052521 - 23052595
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||||||| |||||||| || |||||| |||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagcc-aataccaccaggccaacctaagtg 23052595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 29503349 - 29503275
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||||||||||| | |||||||||| ||||||| || ||||||||||| ||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaacc-aataccactaggccaacccaagtg 29503275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 11062441 - 11062364
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| || ||||||| |||| |||||| ||||||||||||    
T  11062441 agagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagcc-aatatcactaggccaacccaagtg 11062364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 23140908 - 23140981
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||||  ||||| |||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  23140908 gagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagcc-aataccattagaccaacccaa 23140981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 23552698 - 23552771
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||||  ||||| |||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  23552698 gagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagcc-aataccattagaccaacccaa 23552771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 2750588 - 2750649
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgagga 174  Q
    |||||| |||| |||||||||||||||||   ||||||||||||||||||||||||||||||    
T  2750588 aagaagctaaactaaccccctcaaattggcactagagagaatcgaacatgagaccttgagga 2750649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 30410511 - 30410607
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccacta 210  Q
    |||||| |||| |||||||||||||||||    ||||| ||||||||||||| |||||||||| | |||||||| | |||||||||| ||||||||||    
T  30410511 aagaagctaaactaaccccctcaaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagcc-aataccacta 30410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 19244216 - 19244113
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 219  Q
    ||||||| ||| ||||||||||    |||||||||||||| |||||||||| |||| | ||||||| || |||||||| | ||||||| |||||||||||    
T  19244216 taaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtc-aataccagtagaccaaccc 19244118  T
Q  220 aagtg 224  Q
    |||||    
T  19244117 aagtg 19244113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 4060176 - 4060286
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| ||||||||||||||||     |||||||||||||| ||||| ||||||||||| ||||||| || ||  ||| || |||||||||||     
T  4060176 aagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaacc-aataccactagg 4060274  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  4060275 ccaacccaagtg 4060286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 21213847 - 21213777
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccca 220  Q
    ||||||||||| ||||||||  ||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagcc-aataccaccagaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 37480153 - 37480079
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| ||||||||||||||| | ||||||| || |||||||||| |||||||| || ||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagcc-aataccaccaggccaacccaagtg 37480079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 42602634 - 42602558
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||| ||| | |||||||||| || | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagcc-aataccactaggccaacccaagtg 42602558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 40416359 - 40416462
Alignment:
Q  120 taaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccc 219  Q
    |||| ||||||| |||||||||    |||||||||||||| ||||||||| ||||| | || ||||||| || ||||| | ||||||||||| |||||||    
T  40416359 taaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtc-aataccactaggccaaccc 40416457  T
Q  220 aagtg 224  Q
    |||||    
T  40416458 aagtg 40416462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 45026856 - 45026784
Alignment:
Q  114 agaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    ||||| |||| |||||||||||||||||    |||||||||| ||||||||||||||||||| | ||||||||    
T  45026856 agaagctaaactaaccccctcaaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactcc 45026784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 4438941 - 4439051
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||| |||||||||||   ||| ||||||||||||| |||||||||||| | ||||||| ||  |||||||   ||||||| |||     
T  4438941 aagaagctaaactaaccctctcaaattggtaccagaaagaatcgaacatgcgaccttgaggaggagcacactctcagatcccaag-ttaataccattagg 4439039  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  4439040 ccaacccaagtg 4439051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 12994376 - 12994446
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaag 222  Q
    ||||||||| ||||||||| ||||| | |||||||||| |||||||| ||| ||||||||||||||| ||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaa-taccactagaccaactcaag 12994446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 34041550 - 34041660
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| |||| |||||||||||||||||    |||| ||||| ||| ||||||||||||||| | ||||||| ||  ||| ||| | |||||||||||     
T  34041550 aagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtc-aataccactagg 34041648  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  34041649 ccaacccaagtg 34041660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 1435144 - 1435068
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||||||| ||||||||||||||||| |||||||| |  ||||||||| | ||||||||  ||||||||||||    
T  1435144 agagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagcc-agtaccactatgccaacccaagtg 1435068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 1729897 - 1729820
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| ||  | |||||| |||||| | |||||||||| |||||||||| ||||||||||| ||||||||||||    
T  1729897 agagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagcc-aataccactagcccaacccaagtg 1729820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 4262298 - 4262352
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||| ||||||||||||||| | |||||| ||| ||||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaa 4262352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 11251168 - 11251091
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| ||| ||||||||||||||| | |||||| ||| |||||||||| ||||||||||  |||||| |||||    
T  11251168 agagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagcc-aataccactaagccaacctaagtg 11251091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 16918573 - 16918650
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| ||| | ||||||||||||| | ||||||||||  |||||| || ||||||||||| ||||||||||||    
T  16918573 agagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaacc-aataccactaggccaacccaagtg 16918650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 17737625 - 17737692
Alignment:
Q  152 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||| || |||||||||| ||||||||||    
T  17737625 aatcgaacatgagaccttgaggaggagcacactcccaagtcacaaacc-aataccacta-accaacccaa 17737692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 21195670 - 21195745
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||| || |||||||  ||||||||||  ||||||||    
T  21195670 tagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcc-tataccactagggcaacccaa 21195745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 1156546 - 1156476
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacact 184  Q
    ||||||||||||||  || |||||||||  | ||| ||||||| |||||||||||||||| |||||||||||    
T  1156546 aagaagttaaattactccactcaaattga-catagggagaatcaaacatgagaccttgagaagaaacacact 1156476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 5147657 - 5147751
Alignment:
Q  129 cccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||||   |||||||||||||   ||||||||||| || | || |||||||  || |||| ||| ||||||||||||||||||||||    
T  5147657 cccctcaaattggtgcaagagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaa-taccactagaccaacccaagtg 5147751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 6658464 - 6658425
Alignment:
Q  145 tagagagaatcgaacatgagaccttgaggagaaacacact 184  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  6658464 tagagagaatcgaacatgagactttgaggagaagcacact 6658425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 19016109 - 19016035
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||| ||| |||||||| |||||| | |||||||||| ||| |||||||| |||||  |||||||||||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaa-taccatcagaccaacccaagtg 19016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 37755933 - 37756043
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||| ||||||| ||| ||||||||||  | |||| || |||||| |||||||| ||| || | |||| ||||| |||||||||| |||||||| |      
T  37755933 aagaagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagcc-aataccaccaag 37756031  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  37756032 ccaacccaagtg 37756043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 39715070 - 39714996
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||||||| | |||||||| |  ||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtc-aataccaccatgccaacccaagtg 39714996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 32687558 - 32687485
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||||| |||||||| |||||| ||||||||| || ||||||| | || |||||| ||| |||||||||||    
T  32687558 agaatcgaacctgagacctcgaggaggaacacactctcaagtcccaaactaa-taccacaagaacaacccaagtg 32687485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 33569853 - 33569927
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaaccca 220  Q
    |||||||||||||| |||||||| |||||  | |||||| ||| |||| ||||||| ||||||||  ||||||||    
T  33569853 agagagaatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaaccca 33569927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 33839259 - 33839305
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaa 196  Q
    ||||| |||| ||||||||||||||| | ||||||||||||||||||    
T  33839259 agaattgaacctgagaccttgaggaggagcacactcccatgtcccaa 33839305  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 2285264 - 2285336
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||||||||||| |||  |||||||| | | || ||||||| |||||||||||||||| | |||||||||||    
T  2285264 aagaagttaaattagcccaatcaaattgatat-agggagaatcaaacatgagaccttgagaaaaaacacactcc 2285336  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 7799031 - 7799107
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||  ||||| || |||||| | |||||||||| |||||||||| |||||||| ||  |||||||||||    
T  7799031 gagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagcc-aataccaccaggacaacccaagtg 7799107  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 12517751 - 12517823
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagcca--aataccactagaccaaccc 219  Q
    ||||||| ||||||||||||||||||| | || ||||| | |||||||||||  || ||||| ||||||||||    
T  12517751 gagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaacaacaccaccagaccaaccc 12517823  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 28846766 - 28846695
Alignment:
Q  152 aatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    |||||||| |||||| | |||||| | |||||||||| |||||||| ||| |||||||||| ||||| |||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaa-taccactagatcaacctaagtg 28846695  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 30359731 - 30359680
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    |||||||||| |||||||||||||||| | |||||||| | ||||||||||||    
T  30359731 gagaatcgaa-atgagaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 31681127 - 31681075
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||| |||||| |||||||||| |||||||| | ||| ||||||||    
T  31681127 gagaatcgaacctgagactttgaggagaagcacactccaaggtctcaagccaa 31681075  T

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Target: scaffold0258 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 15319 - 15395
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||| |||||||| |||||| | |||||||||| |||||||||| |||||||| |||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcc-aataccaccagaccaacccaagtg 15395  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 94966 - 95043
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||| ||| |||| ||||||||||||||| | |||||||||| || ||||||| ||||||||||| ||||||||||||    
T  94966 agagataattgaacctgagaccttgaggaggagcacactcccaggttccaagcc-aataccactaggccaacccaagtg 95043  T

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Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 16664 - 16592
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcc 186  Q
    |||||||||||||| ||| ||||||||| | | || ||||||| |||||||||||||||| |||||||||||||    
T  16664 aagaagttaaattagcccactcaaattgatat-agggagaatcaaacatgagaccttgagaagaaacacactcc 16592  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 81526 - 81637
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    ||||||||||| |||| ||||||||||||  | || ||||||||||  ||||||||||||||| | |||||| |||  | |||| || |||| |||||||    
T  81526 aagaagttaaactaactccctcaaattggcatcagggagaatcgaatctgagaccttgaggaggagcacacttccagattccaaacc-aatatcactaga 81624  T
Q  213 ccaacccaagtga 225  Q
    |||||| ||||||    
T  81625 ccaaccaaagtga 81637  T

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Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 19957 - 20027
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaac 217  Q
    |||||||||||||| ||||||||||||||| | || ||||||| || ||||||| ||||||||||| |||||    
T  19957 agagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagcc-aataccactaggccaac 20027  T

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Target: scaffold0101 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 43332 - 43382
Alignment:
Q  151 gaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||||||||| || || |||||||||||| ||||||||||||    
T  43332 gaatcgaacatgagaccttaagaaggaacacactcccaagtcccaagccaa 43382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 11609 - 11534
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaag 222  Q
    |||||||||||||| |||||||| |||||| | ||||||||||  ||||||||| |||||||| || ||| ||||||    
T  11609 agagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcc-aataccaccaggccatcccaag 11534  T

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Target: scaffold0178 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 6631 - 6706
Alignment:
Q  148 agagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagtg 224  Q
    ||||||||||||  ||||| |||||||| |||||||||||| |||| || || |||||||||||| ||||| |||||    
T  6631 agagaatcgaacccgagactttgaggaggaacacactcccaagtcctaaacc-aataccactagatcaacctaagtg 6706  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 25342 - 25413
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacc 218  Q
    ||||| |||||||| |||||||||||| || | |||||||||| ||| |||||| ||||||||||||| ||||    
T  25342 agagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagcc-aataccactagacgaacc 25413  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 6921 - 6988
Alignment:
Q  153 atcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||||| |||||| |||||||| | |||||||||  |||||||||| ||||||||||| |||||||||    
T  6921 atcgaacctgagactttgaggaggagcacactccccagtcccaagcc-aataccactaggccaacccaa 6988  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 24167 - 24057
Alignment:
Q  113 aagaagttaaattaaccccctcaaattggtcttagagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactaga 212  Q
    |||||||||||||| ||| ||||||||||  | ||||| |||||||| ||| || | || ||| | |||||||| | |||||||| | ||||||| |||     
T  24167 aagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtc-aataccattagg 24069  T
Q  213 ccaacccaagtg 224  Q
    ||||||||||||    
T  24068 ccaacccaagtg 24057  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 45754 - 45805
Alignment:
Q  146 agagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaag 197  Q
    |||||||||||||||||||||||  ||||| |||||||||| | ||||||||    
T  45754 agagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaag 45805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 13042 - 13096
Alignment:
Q  147 gagagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaa 201  Q
    ||||||||||||| ||||||||||||||| | ||||||||||  || ||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaa 13096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7725 - 7797
Alignment:
Q  150 agaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaagt 223  Q
    |||||||||| ||||||||| ||||| | ||||||  || ||| |||||||| |||||| ||||||||||||||    
T  7725 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaa-taccaccagaccaacccaagt 7797  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 2468 - 2539
Alignment:
Q  149 gagaatcgaacatgagaccttgaggagaaacacactcccatgtcccaagccaaataccactagaccaacccaa 221  Q
    ||||||||||| ||||||||||||||| | ||||||||||  ||| || || ||||||||  |||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaacc-aataccaccggaccaacccaa 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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