View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21223_low_6 (Length: 266)

Name: NF21223_low_6
Description: NF21223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21223_low_6
NF21223_low_6
[»] chr7 (9 HSPs)
chr7 (1-100)||(15578055-15578154)
chr7 (1-100)||(28750641-28750740)
chr7 (1-100)||(38916107-38916206)
chr7 (1-100)||(27230770-27230869)
chr7 (1-44)||(32741536-32741579)
chr7 (18-51)||(21972073-21972106)
chr7 (178-206)||(15577943-15577971)
chr7 (1-37)||(34567692-34567728)
chr7 (1-37)||(41342312-41342348)
[»] chr6 (7 HSPs)
chr6 (1-100)||(12307033-12307132)
chr6 (1-98)||(8701197-8701294)
chr6 (1-100)||(605277-605376)
chr6 (1-84)||(7727100-7727183)
chr6 (48-100)||(5365388-5365440)
chr6 (48-100)||(2481241-2481293)
chr6 (1-51)||(4296669-4296719)
[»] chr2 (4 HSPs)
chr2 (1-100)||(9914509-9914608)
chr2 (1-100)||(30674153-30674252)
chr2 (1-100)||(9074901-9075000)
chr2 (1-51)||(8373215-8373265)
[»] chr1 (4 HSPs)
chr1 (1-100)||(40889077-40889176)
chr1 (1-37)||(3565115-3565151)
chr1 (48-100)||(44681144-44681196)
chr1 (48-100)||(23272386-23272437)
[»] chr4 (7 HSPs)
chr4 (1-100)||(23643713-23643812)
chr4 (1-100)||(43013062-43013161)
chr4 (1-84)||(54714578-54714661)
chr4 (48-100)||(12632824-12632876)
chr4 (48-100)||(27108531-27108583)
chr4 (19-51)||(919096-919128)
chr4 (19-51)||(28104341-28104373)
[»] chr3 (5 HSPs)
chr3 (1-100)||(53153559-53153658)
chr3 (1-100)||(30384770-30384869)
chr3 (1-100)||(785484-785583)
chr3 (1-51)||(18715217-18715267)
chr3 (18-51)||(39737279-39737312)
[»] chr5 (4 HSPs)
chr5 (1-100)||(25672562-25672661)
chr5 (1-100)||(14394276-14394375)
chr5 (1-100)||(20983774-20983873)
chr5 (1-37)||(25980457-25980493)
[»] chr8 (3 HSPs)
chr8 (1-100)||(308606-308705)
chr8 (1-100)||(186979-187077)
chr8 (1-100)||(25276857-25276955)


Alignment Details
Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15578154 - 15578055
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15578154 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 15578055  T

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Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28750641 - 28750740
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28750641 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 28750740  T

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Target: chr7; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 38916107 - 38916206
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38916107 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 38916206  T

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Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27230869 - 27230770
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27230869 attaaagtgagatataagtcaactaattaaaataagatataattgtatttattgtttgtttttgtagcactaacatcaacaattatgttatttatcatct 27230770  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32741536 - 32741579
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagtt 44  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||    
T  32741536 attatagtgagatataagtcaactaattaaattaagatatagtt 32741579  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 21972106 - 21972073
Alignment:
Q  18 gtcaactaattaaaataagatatagttgtattta 51  Q
    |||||||||||||||||||| |||||||||||||    
T  21972106 gtcaactaattaaaataagaaatagttgtattta 21972073  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 15577971 - 15577943
Alignment:
Q  178 aataatacctaataaattgaacgtaacgt 206  Q
    |||||||||||||||||||||||||||||    
T  15577971 aataatacctaataaattgaacgtaacgt 15577943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34567728 - 34567692
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataaga 37  Q
    |||||||||| | ||||||||||||||||||||||||    
T  34567728 attaaagtgataaataagtcaactaattaaaataaga 34567692  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41342312 - 41342348
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataaga 37  Q
    |||||||||||| |||| |||||||||||||||||||    
T  41342312 attaaagtgagaaataaatcaactaattaaaataaga 41342348  T

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Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12307033 - 12307132
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12307033 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 12307132  T

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Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8701294 - 8701197
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcat 98  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8701294 attaaagtgatatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcat 8701197  T

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Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 605376 - 605277
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  605376 attaaattgagatataaatcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 605277  T

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Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 7727100 - 7727183
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt 84  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7727100 attaaagtgcgatataaatcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt 7727183  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 5365388 - 5365440
Alignment:
Q  48 tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| ||||||||||||| || ||| |||||||||||||||||||    
T  5365388 tttattgtttgtctttgtagcactaatattatccattatgttatttatcatct 5365440  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 2481293 - 2481241
Alignment:
Q  48 tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| ||||||||||||| |  ||| |||||||||||||||||||    
T  2481293 tttattgtttgtctttgtagcactaatactatccattatgttatttatcatct 2481241  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4296669 - 4296719
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtattta 51  Q
    |||||||||| | |||||||||||||||||||||| | | |||||||||||    
T  4296669 attaaagtgataaataagtcaactaattaaaataaaagagagttgtattta 4296719  T

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Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9914608 - 9914509
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9914608 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 9914509  T

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Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30674153 - 30674252
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30674153 attaaagtgagatataagtcatctaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 30674252  T

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Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9075000 - 9074901
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9075000 attaaagtgagatataaatcaactaattaaaatgagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 9074901  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8373265 - 8373215
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtattta 51  Q
    |||||||||| | ||||||||| |||||||||||| ||| |||||||||||    
T  8373265 attaaagtgataaataagtcaattaattaaaataaaataaagttgtattta 8373215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 40889176 - 40889077
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40889176 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 40889077  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3565151 - 3565115
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataaga 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3565151 attaaagtgagaaataagtcaactaattaaaataaga 3565115  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 44681144 - 44681196
Alignment:
Q  48 tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| ||||||||||||| |  ||| |||||||||||||||||||    
T  44681144 tttattgtttgtctttgtagcactaatactatccattatgttatttatcatct 44681196  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 23272386 - 23272437
Alignment:
Q  48 tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    ||||||||| || ||||||||||||| || |||| ||||||||||||||||||    
T  23272386 tttattgttggtctttgtagcactaatattatca-ttatgttatttatcatct 23272437  T

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Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23643812 - 23643713
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23643812 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgttttcgtagcactaacatcatcaattatgttatttatcatct 23643713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43013161 - 43013062
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43013161 attaaagtgagatataagtcaactaattaaaatgagatatagttgtatttattgtttgtttttgtagcattaacatcatcaattatgttatttatcatct 43013062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 54714578 - 54714661
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt 84  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54714578 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatt 54714661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 12632824 - 12632876
Alignment:
Q  48 tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| ||||||||||||| || ||| |||||||||||||||||||    
T  12632824 tttattgtttgtctttgtagcactaatattatccattatgttatttatcatct 12632876  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 27108531 - 27108583
Alignment:
Q  48 tttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| ||||||||||||| |  ||| |||||||||||||||||||    
T  27108531 tttattgtttgtctttgtagcactaatactatccattatgttatttatcatct 27108583  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 919128 - 919096
Alignment:
Q  19 tcaactaattaaaataagatatagttgtattta 51  Q
    ||||||||||||||||||| |||||||||||||    
T  919128 tcaactaattaaaataagaaatagttgtattta 919096  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 28104373 - 28104341
Alignment:
Q  19 tcaactaattaaaataagatatagttgtattta 51  Q
    ||||||||||||||||||| |||||||||||||    
T  28104373 tcaactaattaaaataagaaatagttgtattta 28104341  T

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Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 53153559 - 53153658
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53153559 attaaagtgagatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaatgatgttatttatcatct 53153658  T

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Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30384770 - 30384869
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30384770 attaaagtgagatataagtcaactaattaaaataagatataattgtatttattgtttgtttttgtagcactaacatcattaattatgttatttatcatct 30384869  T

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Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 785484 - 785583
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||| |||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  785484 attaaattgagatgtaaatccactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 785583  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18715217 - 18715267
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtattta 51  Q
    |||||||||| | ||||||||| |||||||||||| | |||||||||||||    
T  18715217 attaaagtgataaataagtcaattaattaaaataaaagatagttgtattta 18715267  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 39737279 - 39737312
Alignment:
Q  18 gtcaactaattaaaataagatatagttgtattta 51  Q
    |||||||||||||||||||| |||||||||||||    
T  39737279 gtcaactaattaaaataagaaatagttgtattta 39737312  T

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Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25672661 - 25672562
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25672661 attaaagtgatatataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcacaaacatcatcaattatgttatttatcatct 25672562  T

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Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14394375 - 14394276
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  14394375 attaaagtgagatataagtcaactaattaaaataagatataattgtatttattatttgtttttgtaacactaacatcatcaattatgttatttatcatct 14394276  T

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Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 20983873 - 20983774
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  20983873 attaaagtgagatataagtcaactaattaaaatgagatatagttgtatttattgtttgtttttgtagtattaacatcatcaattatgttatttatcatct 20983774  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25980457 - 25980493
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataaga 37  Q
    |||||||||| | ||||||||||||||||||||||||    
T  25980457 attaaagtgataaataagtcaactaattaaaataaga 25980493  T

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Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 308705 - 308606
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  308705 attaaaatgagatataaatcaactaattaaaataagatatagttatatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 308606  T

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Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 187077 - 186979
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  187077 attaaagtgagatataagtcaactaattata-taagatataattgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 186979  T

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Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25276857 - 25276955
Alignment:
Q  1 attaaagtgagacataagtcaactaattaaaataagatatagttgtatttattgtttgtttttgtagcactaacatcatcaattatgttatttatcatct 100  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25276857 attaaagtgagatataagtcaagtaattaaaataaaatatagttgtatttattgtttgttttt-tagcactaacatcatcaattatgttatttatcatct 25276955  T

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