View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21224_high_15 (Length: 244)
Name: NF21224_high_15
Description: NF21224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21224_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 35321585 - 35321362
Alignment:
| Q |
1 |
tgagatatcaaaattacgatgtgaccacaatttaaaaccttgatttgattttaacaatatagaataannnnnnncttatatctgggaggtgtgacctcac |
100 |
Q |
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| T |
35321585 |
tgagatatcaaaattacgatgtgaccacaatttaaaaccttgatttgattttaacaatatagaataatttatttcttatatctgggaggtgtgacctcac |
35321486 |
T |
|
| Q |
101 |
ctgaatgacatgatttttgaagctgacattctctttctcctttctgcttctgtactcaacatacagaatgctaatcaaataagcagtccaactacccatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35321485 |
ctgaatgacatgatttttgaagctgacattctctttctcctttctgcttctgtactcaacatacagaatgctaatcaaataagcagtccaactacccatc |
35321386 |
T |
|
| Q |
201 |
aatccataaaagacttggaatatg |
224 |
Q |
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|||||||| ||||||||||||||| |
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| T |
35321385 |
aatccatagaagacttggaatatg |
35321362 |
T |
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