View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21225_high_15 (Length: 229)
Name: NF21225_high_15
Description: NF21225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21225_high_15 |
 | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
| [»] scaffold0020 (1 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 29059784 - 29059881
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
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|
| T |
29059784 |
acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
29059881 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 8839443 - 8839346
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
8839443 |
acccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactc |
8839346 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 31492100 - 31492179
Alignment:
| Q |
113 |
gagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31492100 |
gagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
31492179 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 13254263 - 13254166
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| | |||||||||| ||| |||||| |
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|
| T |
13254263 |
acccaagagcgcttagatgagatggaacgggtctcttctagcttaaccaaggtcctgagttcgaatccagccttaggcatgcagcagcgttgaaactc |
13254166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 19477411 - 19477314
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||| ||||||||| || ||||||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
19477411 |
acccaagagcgtttagatgagatggaacgggtctcttctagcttaaccaaggttctgggtttgaatccagccttgggcatgcaacagtgttaaaactc |
19477314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 28537369 - 28537466
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
28537369 |
acccaagagcgcttagatgagatggaacgggtctcttctaacttaatcaaggttttgggttcgaatccagccttgggcatgcaacaacgttaaaactc |
28537466 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 21747201 - 21747105
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||| || | ||||| |||| |||||||||| |
|
|
| T |
21747201 |
acccaagagcgtttagatgagatggaacgggtctcttctaacttaaccaaggtcctggg-tcgaatccagctttaggcatgctgcagcgttaaaactc |
21747105 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 2657996 - 2657901
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||| |||||| ||||||||||| |||||||||||||||| ||| | |||| |||| ||| ||||||||| ||||||||| |||||||||| |
|
|
| T |
2657996 |
ccaagagcgcttagatgagatggaacgagtctcttctaacttaatcaaggccctgagttcaaatacagccttgggcatgcagcaacgttaaaactc |
2657901 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 40099434 - 40099337
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||| ||||| |||||| |||||||||||||||||||||| |||||| || ||||| |||||||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
40099434 |
acccgagagcgcttagatgagatggaacgggtctcttctagcttaactaagatcctgaattcgaatccagctttggatatgcagcagcattaaaactc |
40099337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 7265475 - 7265378
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||| | |||||| |||||||||||||| |||||||||||| |||||||| ||| || ||||| |||||||| ||||||||||| |
|
|
| T |
7265475 |
acccaagagcgtttatatgagatgacacgggtctcttctagcttaaccaaagttttgggttcggatctagtcttgggcatgcagcgatgttaaaactc |
7265378 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 46373652 - 46373749
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||||||||| ||||| ||| |||||||||||||||||| ||||| ||| || || |||||||||| |
|
|
| T |
46373652 |
acccaagagctcttagatgagatgacgcgggtctcttctagcttaagcaagatcctgggttcgaatccagtcttgggcatacaacatcgttaaaactc |
46373749 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 2871104 - 2871040
Alignment:
| Q |
128 |
tcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| || ||||||| ||||||| |||| |||||||| || ||||||||||| |
|
|
| T |
2871104 |
tcttctaacttaaccaaggttctgggtttgaatccatccttagacatgcaacaatgttaaaactc |
2871040 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 42741972 - 42741909
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaat |
160 |
Q |
| |
|
|||||||| ||||| |||||||||| ||||||||||| ||||||||| ||||| ||||||||| |
|
|
| T |
42741972 |
ccaagagcgtttagatgagatggaacaggtctcttctatcttaaccaatgtcctaggttcgaat |
42741909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 12142637 - 12142702
Alignment:
| Q |
127 |
ctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | | | ||| ||||||||| |||||||||| |
|
|
| T |
12142637 |
ctcttctaacttaaccaaagtccttggttcgaattcggtcatgggcatgcagcatcgttaaaactc |
12142702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 37900491 - 37900436
Alignment:
| Q |
137 |
ttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||| ||||||| |||| | |||| ||||||||||| ||||||||||| |
|
|
| T |
37900491 |
ttaaccaaagtcatgggttcaaatcaaaccttagacatgcagcaatgttaaaactc |
37900436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 37907002 - 37906947
Alignment:
| Q |
137 |
ttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||| ||||||| |||| | |||| ||||||||||| ||||||||||| |
|
|
| T |
37907002 |
ttaaccaaagtcatgggttcaaatcaaaccttagacatgcagcaatgttaaaactc |
37906947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 5905812 - 5905898
Alignment:
| Q |
106 |
cttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| ||||| ||||| |||||||||||||||||||| ||| | || | ||||||| |||| |||||||||| ||||||||| |
|
|
| T |
5905812 |
cttagatgagatagaacgagtctcttctaacttaaccaacgtcttaggcttgaatccaatattgggcatgcagcagcattaaaactc |
5905898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 22315903 - 22315850
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcag |
178 |
Q |
| |
|
|||||||||||||||||||| ||| || ||| |||||| |||||||||||||| |
|
|
| T |
22315903 |
gtctcttctaacttaaccaaggtcatgagtttcaatccaaccttggacatgcag |
22315850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 25)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 31307228 - 31307131
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31307228 |
acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
31307131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 14854581 - 14854681
Alignment:
| Q |
92 |
tggacccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
||||||||||||| |||||| |||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
14854581 |
tggacccaagagcgcttagatgagatggaacggttctcttctagcttaaccaaggttctgggttcgaatccagccttgggcatgcagcatcgttaaaact |
14854680 |
T |
|
| Q |
192 |
c |
192 |
Q |
| |
|
| |
|
|
| T |
14854681 |
c |
14854681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 38766071 - 38766165
Alignment:
| Q |
98 |
caagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||| |||||| ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||| |||||||||| |||||||||| |
|
|
| T |
38766071 |
caagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggtttgaatccagccttgggcatgcagcagcgttaaaactc |
38766165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 35972322 - 35972418
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||||||| |||||| ||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||| ||| ||| |||||| ||||||||| |
|
|
| T |
35972322 |
acccaagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtcttgggttcgaatccagccatgggcatacagcagcgttaaaact |
35972418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 13686580 - 13686677
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| ||||||| | ||||||||||| ||||||||| |||||||||||||||||| |||||| | |||||||| |||||||||| |
|
|
| T |
13686580 |
acccaagagcgcttagatgagatggcatgggtctcttcttgcttaaccaaggtcctgggttcgaatccatccttgggcgtgcagcagcgttaaaactc |
13686677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 45994501 - 45994598
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||||| |||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
45994501 |
acccaagagcgtttagatgagatggaacaggtctcttctagcttaaccaaggtcctggattcgaatccagccttgggcatgcaacaacgttaaaactc |
45994598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 46016154 - 46016225
Alignment:
| Q |
124 |
ggtctcttctaacttaaccaaa---gtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
46016154 |
ggtctcttctagcttaaccaagtaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
46016225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 56447272 - 56447187
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||| |||||| ||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
56447272 |
ttagaagagatgtcacgggtttcttctagtttaaccaaagtcctaggttcgaatccagctatgggcatgcagcagtgttaaaactc |
56447187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 51853677 - 51853760
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagc |
179 |
Q |
| |
|
|||||||||| |||||| ||||| ||| | ||||||||||||||||||||||| || ||||||||| ||||||||| |||||||| |
|
|
| T |
51853677 |
acccaagagcgcttagatgagatagaatgagtctcttctaacttaaccaaagttct-ggttcgaattcagccttgggcatgcagc |
51853760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 38844312 - 38844233
Alignment:
| Q |
113 |
gagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||| |||||||||| ||||||||| ||| || ||||||||||||| |||| |||||| ||| |||||||||| |
|
|
| T |
38844312 |
gagatggaacgagtctcttctagcttaaccaaggtcatgagttcgaatccagctttgggcatgcaacagcgttaaaactc |
38844233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 32005313 - 32005231
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
||||||||| ||| || ||||||||| |||||||||||||||||||||||||||| |||||||| |||| |||| |||||| |
|
|
| T |
32005313 |
acccaagagagcttggatgagatggaataggtctcttctaacttaaccaaagtcctgagttcgaattcagctttgggcatgca |
32005231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 11140436 - 11140533
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||| |||| | ||||||| ||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
11140436 |
acccaagagcgcttagataagataacacggctatcttctagcttaaccaaggtcctggtttcgaatccagccttgggcatgcagcagctttaaaactc |
11140533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 46250698 - 46250620
Alignment:
| Q |
117 |
tggaacgggtctcttctaacttaaccaaa---gtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||| |||||||| ||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
46250698 |
tggaacggggctcttctagcttaaccaagtaggtcctaggttcgaatccagtcttgggcatgcagcagtgttaaaactc |
46250620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 10199264 - 10199198
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatcca |
163 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||| |||||||||||| ||| || ||||||||||| |
|
|
| T |
10199264 |
ccaagagtgcttagatgagatggaacgggtctcttataacttaaccaaggtcttgtgttcgaatcca |
10199198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 49877499 - 49877419
Alignment:
| Q |
17 |
cacagatctcagcaaagaaatggttat--ctttcttatnnnnnnnncatgatactatttttgtcaaatacacatggttgga |
95 |
Q |
| |
|
|||| |||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
49877499 |
cacaaatctcagcaaagaaatggttatatctttgttataaaaaaaacatgatactatttttgtcaaatacacatggttgga |
49877419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 17135106 - 17135172
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||||| ||||||||| | |||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
17135106 |
gtctcttctagcttaatcaaagtcctag-ttcgaatccagccttgtgcatgcagcagcgttaaaactc |
17135172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 9012300 - 9012346
Alignment:
| Q |
146 |
gtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
9012300 |
gtcctgggttcgaatctagccttgggcatgcagcagtgttcaaactc |
9012346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 22189547 - 22189465
Alignment:
| Q |
98 |
caagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagca |
180 |
Q |
| |
|
|||||||||||||| |||||| | | |||||||||| ||||||||| |||| | ||||||||||| ||||| ||||||||| |
|
|
| T |
22189547 |
caagagcacttagatgagatgacatgagtctcttctagcttaaccaaggtccagagttcgaatccaaccttgtgcatgcagca |
22189465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 48998136 - 48998070
Alignment:
| Q |
126 |
tctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| |||||||| ||| |||||| ||||||||| || |||||||||||| ||| |||||||||| |
|
|
| T |
48998136 |
tctcttttaacttaatcaaggtcctgagttcgaatcgagtcttggacatgcatcagcgttaaaactc |
48998070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 51626410 - 51626372
Alignment:
| Q |
153 |
gttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
51626410 |
gttcgaatccagccttgggcatgcagcagtgttaaaact |
51626372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 13948698 - 13948657
Alignment:
| Q |
151 |
gggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13948698 |
gggttcgaatccagccttgggtatgcagcagtgttaaaactc |
13948657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 25768814 - 25768775
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttcta |
134 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
25768814 |
acccaagagcgcttagatgagatggaacgggtctcttcta |
25768775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 41335817 - 41335742
Alignment:
| Q |
114 |
agatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaa |
189 |
Q |
| |
|
||||| ||||| |||||| ||||||||||||| | ||| |||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
41335817 |
agatgtaacggatctcttttaacttaaccaaaattatggattcgaatctagcattggacatgcagcaacgttaaaa |
41335742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 14042843 - 14042905
Alignment:
| Q |
130 |
ttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || ||||| |||||||| | ||| |||||| |
|
|
| T |
14042843 |
ttctaacttaaccaacgttctgggttcgaatcaagtcttgggcatgcagccgcgtttaaactc |
14042905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 2434567 - 2434635
Alignment:
| Q |
124 |
ggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||| | |||||||||| | | ||||||||||||||||||||||| || || |||||||||| |
|
|
| T |
2434567 |
ggtctcttcaatcttaaccaaaattttaggttcgaatccagccttggacatacaacaacgttaaaactc |
2434635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 44732736 - 44732638
Alignment:
| Q |
94 |
gacccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44732736 |
gacccaagagcacttagatgagatggaacgggtctcttatagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
44732638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 37568889 - 37568792
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
37568889 |
acccaagagcacttagatgagatggaacgggtttcttctagcttaaccaaggtcctgggttcgaatccagccttaggcatgcagcagtgttaaaactc |
37568792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 42745279 - 42745181
Alignment:
| Q |
94 |
gacccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
42745279 |
gacccaagagcgcttagatgagatggaacgggtctcttatagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaatgttaaaactc |
42745181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 31579392 - 31579295
Alignment:
| Q |
94 |
gacccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||||| ||||| ||| ||| ||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
31579392 |
gacccaagagcacttagatgagatgtaacgggtctcttctagcttaatcaaggtcttgggttcgaatccagccttgggcatgcaacagtgttaaaact |
31579295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 5394380 - 5394472
Alignment:
| Q |
99 |
aagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
5394380 |
aagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagca-tgttaaaactc |
5394472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 12133392 - 12133295
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12133392 |
acccaagagcgcttagatgagatggaacgagtctcttctagcttaatcaaggtcatgggttcgaatccagccttggacatgcagcaacgttaaaactc |
12133295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 28365928 - 28366014
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcag |
181 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||||||||||||||||| ||| || |||||||| ||||||||| |||||||||| |
|
|
| T |
28365928 |
acccaagagcgcttagatgagatggaacgcgtctcttctaacttaaccaaggtcgtgagttcgaatgcagccttgggcatgcagcag |
28366014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 9438298 - 9438201
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||||| ||||||||||| |||||| || ||||||||||||| | ||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
9438298 |
acccaagagcgtttagatgagatggaacgaatctcttttagcttaaccaaagtctttggttcgaatccagccttgggcatgcagcagggttaaaactc |
9438201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 18105520 - 18105442
Alignment:
| Q |
99 |
aagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
|||||| |||| | ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
18105520 |
aagagcgcttatatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgca |
18105442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 17627543 - 17627620
Alignment:
| Q |
100 |
agagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||| |||||||||||||||||| |||||| |
|
|
| T |
17627543 |
agagcgcttagacgagatgacacgcgtctcttctaatttaaccaaggtcctgagttcgaatccagccttgggcatgca |
17627620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 7157479 - 7157574
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||| ||| |||||| | ||| ||||| |||||||||||||||||||| |||| |||||||||| |||||||| ||||||||| |||||||||| |
|
|
| T |
7157479 |
ccaatagcgcttagatgggatagaacgagtctcttctaacttaaccaagatcctaggttcgaatctagccttgggcatgcagcaacgttaaaactc |
7157574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 993736 - 993819
Alignment:
| Q |
98 |
caagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcag |
181 |
Q |
| |
|
||||||| |||||| |||||| ||| ||||||| || ||||||||| ||||||||||||||| || |||||| |||||||||| |
|
|
| T |
993736 |
caagagcgcttagatgagatgacacgtgtctcttatagcttaaccaaggtcctgggttcgaattcaaccttgggcatgcagcag |
993819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 17672610 - 17672692
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
|||| ||||| ||||||||||||| ||| |||||||| || |||||||| |||||| ||||||||||| |||||| |||||| |
|
|
| T |
17672610 |
accctagagcgcttagacgagatgacacgcgtctcttcaaatttaaccaaggtcctgagttcgaatccaaccttgggcatgca |
17672692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 17981477 - 17981559
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
|||||| ||| |||||| ||||||||||| |||||||||| |||||||||||||||| || ||||||| ||||| |||||| |
|
|
| T |
17981477 |
acccaatagcgcttagatgagatggaacgagtctcttctagcttaaccaaagtcctgaatttaaatccagtcttgggcatgca |
17981559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 38463964 - 38464031
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||| |||||||||||||||||| || | ||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
38463964 |
gtcttttctaacttaaccaaagttctagattcgaatccagccttgggcatgcaacaccgttaaaactc |
38464031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 40688888 - 40688818
Alignment:
| Q |
99 |
aagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttgg |
170 |
Q |
| |
|
|||||| ||||| ||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| |
|
|
| T |
40688888 |
aagagcgcttaggtgagatggaattggtctcttctaacttaaccaaagtcctgag-tcgaattcagccttgg |
40688818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 3772703 - 3772612
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaa |
188 |
Q |
| |
|
|||||||| |||||| |||||| || ||||||||||| |||||||| ||||| ||||||||||| |||| ||||||| || ||||||| |
|
|
| T |
3772703 |
ccaagagcgcttagatgagatgacacaagtctcttctaatttaaccaaggtcctaagttcgaatccaatcttgaacatgcaacaatgttaaa |
3772612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 33756956 - 33757030
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttg |
169 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||||||| ||||| ||| || || |||||||| |||||||| |
|
|
| T |
33756956 |
acccaagaacacttagatgagatgacacgggtctcttctagcttaatcaaggttcttagttcgaattcagccttg |
33757030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 45414075 - 45414013
Alignment:
| Q |
98 |
caagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaat |
160 |
Q |
| |
|
|||||||||||||| |||||| |||| ||||||||||| ||||| ||||| ||| ||||||| |
|
|
| T |
45414075 |
caagagcacttagatgagatgaaacgagtctcttctaatttaacgaaagttctgaattcgaat |
45414013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 19252655 - 19252590
Alignment:
| Q |
94 |
gacccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaa |
159 |
Q |
| |
|
||||||||||| ||||| |||||| ||||||||||| || |||||||||| ||||| ||||||| |
|
|
| T |
19252655 |
gacccaagagcgtttagatgagatgatacgggtctcttttagcttaaccaaactcctgagttcgaa |
19252590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 24359573 - 24359617
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttg |
169 |
Q |
| |
|
|||||||||||||||| ||| ||||| |||| ||||||||||||| |
|
|
| T |
24359573 |
gtctcttctaacttaatcaaggtcctaggtttgaatccagccttg |
24359617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 2743912 - 2744009
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2743912 |
acccaagagcatttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
2744009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 4125186 - 4125089
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
4125186 |
acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaatgtcctgggttcgaatcaagccttgggcatgcagcactgttaaaactc |
4125089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 30935983 - 30936080
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
30935983 |
acccaagagcacttagatgagatggaacgggtctcttctaacttaaccaaggtcctgagttcgaatccagccttaagcatgcagcaacgttaaaactc |
30936080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 13468888 - 13468810
Alignment:
| Q |
114 |
agatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||| |
|
|
| T |
13468888 |
agatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgtagcagcgttaaaactc |
13468810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 36994662 - 36994565
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||| || |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
36994662 |
acccaagagcgcttagataagatggcacatgtctcttctagtttaaccaaggtcctgggttcgaatccagccttggacatgcagcagcgttaaaactc |
36994565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 19715882 - 19715791
Alignment:
| Q |
101 |
gagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||| |||||| |||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
19715882 |
gagcgcttagatgagatggaacatgtcttttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactc |
19715791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 15682928 - 15683005
Alignment:
| Q |
115 |
gatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||| |||||||||| ||||| ||| |||||| |||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
15682928 |
gatggaacgagtctcttctagcttaatcaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactc |
15683005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 35206990 - 35207076
Alignment:
| Q |
106 |
cttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| |||||| ||| ||||||||||||||||||||| | |||||||||||| | ||||||||||||||||| |||||||||| |
|
|
| T |
35206990 |
cttagatgagatgaaacaggtctcttctaacttaaccaagattctgggttcgaatttaaccttggacatgcagcagcgttaaaactc |
35207076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 27121886 - 27121816
Alignment:
| Q |
121 |
acgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||||| || |||||| ||||||||||||| |
|
|
| T |
27121886 |
acgggtctcttctagcttaaccaaagttctgggttcgaatccagctttaagcatgcaacagtgttaaaact |
27121816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 30056151 - 30056066
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||||||| |||||||||| |||||| || ||| ||||||| ||||||||||| | |||||||||| ||||||||| |
|
|
| T |
30056151 |
ttagatgagatggaacatgtctcttctagcttaacgaaggtcatgggttcaaatccagccttaggcatgcagcagcattaaaactc |
30056066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 39086797 - 39086853
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctg |
151 |
Q |
| |
|
|||||||||| |||||| ||||||||||||| |||||||| ||||||||| |||||| |
|
|
| T |
39086797 |
acccaagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtcctg |
39086853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 44705653 - 44705725
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttg |
169 |
Q |
| |
|
|||||||| ||||| | |||||||| ||||||||||| |||||||| ||| |||||||||||||||||||| |
|
|
| T |
44705653 |
ccaagagcgtttagatgggatggaacaggtctcttctagtttaaccaaggtcttgggttcgaatccagccttg |
44705725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 16701513 - 16701462
Alignment:
| Q |
123 |
gggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacat |
174 |
Q |
| |
|
|||||||||||| |||||| || || |||||||||||||||||||||||||| |
|
|
| T |
16701513 |
gggtctcttctatcttaactaaggttctgggttcgaatccagccttggacat |
16701462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 8616250 - 8616186
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaa |
189 |
Q |
| |
|
||||||||||| |||||||||||| || ||| |||| | ||||||||||||| | ||||||||| |
|
|
| T |
8616250 |
gtctcttctaatttaaccaaagtcatgtgtttaaatctaaccttggacatgcatccgtgttaaaa |
8616186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 24988530 - 24988570
Alignment:
| Q |
152 |
ggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||| |
|
|
| T |
24988530 |
ggtttgaatccagccttgggcatgcagcagtgctaaaactc |
24988570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 10591906 - 10592003
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10591906 |
acccaagagcacttagatgagatggaacgggtctcttctagattaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
10592003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 30785148 - 30785051
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||||||| ||||| ||| ||| |||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
30785148 |
acccaagagcatttagatgagatggaacgagtctcttctagcttaatcaatgtcttgggttcgaatccagctttggacatgcagcaacgttaaaactc |
30785051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 28023605 - 28023509
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||| | ||| || |||||||||||| |
|
|
| T |
28023605 |
acccaagagcgcttagatgagatggaacggatctcttctagcttaaccaatgtcctgagttcgaatccagccttaggcatatagtagtgttaaaact |
28023509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 2798476 - 2798381
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
||||||||||| ||||| |||||| ||||| | ||||||| ||||||||| || ||||||||||||||| ||||| |||||||||| ||||||||| |
|
|
| T |
2798476 |
acccaagagcagttagatgagatgaaacggtt-tcttctagcttaaccaaggttctgggttcgaatccaaccttgagcatgcagcagcgttaaaact |
2798381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 18909457 - 18909366
Alignment:
| Q |
98 |
caagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||| |||||| ||||| |||||||| ||||| ||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
18909457 |
caagagcgcttagatgagatagaacgggt---ttctagcttaatcaaggtcctaggttcgaatccagccttgggtatgcagcagtgttaaaactc |
18909366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 2804643 - 2804548
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
||||||||||| ||||| |||||| ||||| | ||||||| ||||||||| || |||||||||||||| ||||| |||||||||| ||||||||| |
|
|
| T |
2804643 |
acccaagagcagttagatgagatgaaacggtt-tcttctagcttaaccaaggttttgggttcgaatccaaccttgagcatgcagcagcgttaaaact |
2804548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 22188147 - 22188061
Alignment:
| Q |
106 |
cttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||||||||||| || |||||| |||||||||||||| ||| || ||| |||||||||| |
|
|
| T |
22188147 |
cttagatgagattgaacgaatctcttctaacttaaccaaggtattgggtttgaatccagccttgggcatacaacagcgttaaaactc |
22188061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 31113325 - 31113410
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||| ||||||||| || || ||||| || || || ||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
31113325 |
ttagatgagatgaaacgggtcttttttagcttaattaaggttctaggttcgaattcagccttgggcatgcagcagtgttaaaactc |
31113410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 12682632 - 12682711
Alignment:
| Q |
113 |
gagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| |||| |||||||||| ||||| ||| || ||| ||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
12682632 |
gagatgaaacgagtctcttctagcttaagcaatgttctgagttcgaatccagccttgagcatgcaacaacgttaaaactc |
12682711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 26332 - 26407
Alignment:
| Q |
117 |
tggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26332 |
tggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactc |
26407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 12411138 - 12411224
Alignment:
| Q |
106 |
cttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
12411138 |
cttagatgagatggaacaggtctcttctaacttaaccaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactc |
12411224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 28099251 - 28099318
Alignment:
| Q |
124 |
ggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28099251 |
ggtctcttctaccttaactaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaact |
28099318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 15614733 - 15614639
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||||| |||| | ||||||||||| |||||||||||||||||||| ||| ||||||||||| ||| |||||||||| |||| ||||||||| |
|
|
| T |
15614733 |
ccaagagcgcttatatgagatggaacgagtctcttctaacttaaccaatgtcatgggttcgaattcagtcttggacatgtagcaacgttaaaact |
15614639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 21029127 - 21029062
Alignment:
| Q |
113 |
gagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcag |
178 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||| ||||||| |
|
|
| T |
21029127 |
gagatggcacgggtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcag |
21029062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 21910184 - 21910281
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||||| |||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
21910184 |
acccaagagcgtttagatgagatgaaacaagtctcttctagcttaaccaagatcctgggttcgaatccagccttgggcatgcaacatcgttaaaactc |
21910281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 25084013 - 25084110
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||| |||||||| |||||| || |||||||||| ||||| ||||||| || |||||||| ||| ||||||||||||||| ||||||||||| |
|
|
| T |
25084013 |
acccaagaacacttagatgagatgacacaagtctcttctagcttaatcaaagtcttgagttcgaattcagtcttggacatgcagcaatgttaaaactc |
25084110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 31107643 - 31107558
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||| || ||||||||||||||||||| || || ||| ||||||||||||| ||||||||||| ||| |||||||||| |
|
|
| T |
31107643 |
ttagatgagatgaaatgggtctcttctaacttaactaaggttctgagttcgaatccagcattggacatgcaacagcgttaaaactc |
31107558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 423637 - 423731
Alignment:
| Q |
98 |
caagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||| |||||| |||||||||| | ||||||||| |||||||| || |||||| |||||||||||||| ||||| |||| |||||||||| |
|
|
| T |
423637 |
caagagcgcttagatgagatggaacagatctcttctagtttaaccaaggttttgggtttgaatccagccttgggcatgctgcagcgttaaaactc |
423731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 31412102 - 31412198
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| || ||||| || ||| | || |||||| |||| |||| | ||||||||||||||||||| |
|
|
| T |
31412102 |
acccaagagcacttagatgagatggaacgggtctctcatagtttaactaaggtcat-ggatcgaattcagctttgggcgtgcagcagtgttaaaactc |
31412198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 3237929 - 3237996
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||| |||||||| |||| |||||||||||||||||| |||| ||| | ||||||||||| |
|
|
| T |
3237929 |
gtctcttctaatttaaccaagatccttggttcgaatccagccttgaacattcagtaatgttaaaactc |
3237996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 5944847 - 5944917
Alignment:
| Q |
121 |
acgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
||||||||||| |||||||||||| |||||| |||||||| ||| ||| |||||| | || |||||||||| |
|
|
| T |
5944847 |
acgggtctcttttaacttaaccaaggtcctgagttcgaattcagtctttgacatgtaacattgttaaaact |
5944917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 27735469 - 27735553
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| ||||||| || |||||||| || ||||||||| ||| || |||||||| || ||||||||||| ||| |||||||||||| |
|
|
| T |
27735469 |
ttagatgagatggcacaggtctcttttagcttaaccaatgtc-tgagttcgaatacaaccttggacatggagcggtgttaaaactc |
27735553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 12837005 - 12836962
Alignment:
| Q |
149 |
ctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||||| | |||||||||| |||||||||| |
|
|
| T |
12837005 |
ctgggttcgaatccagccttaggcatgcagcagcgttaaaactc |
12836962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 9433268 - 9433202
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||||||| |||||| ||||| ||||||||||||||| | ||||| ||||| || ||||||||| |
|
|
| T |
9433268 |
gtctcttctatcttaactaaagttctgggttcgaatccacctttggatatgcaacaacgttaaaact |
9433202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 30996127 - 30996030
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||| ||| |||||||||| |
|
|
| T |
30996127 |
acccaagagcgcttagatgagatggaacgggtctcttctatcttaaccaaggtcctgggttcgaatccgaccttgggcatgcaacagcgttaaaactc |
30996030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 27763698 - 27763797
Alignment:
| Q |
91 |
ttggacccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaac |
190 |
Q |
| |
|
|||||||||||||| |||||| ||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||| ||| || |||||||||||| |
|
|
| T |
27763698 |
ttggacccaagagcgcttagatgagatagaacgggtctc--ctagcttaaccaaggtcctgggttcgaatccagccttgggcatacaacagtgttaaaac |
27763795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 48204473 - 48204378
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaac |
190 |
Q |
| |
|
||||||||| |||||| ||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
48204473 |
acccaagagtgcttagatgagatggaacgagtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaacgttaaaac |
48204378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 25224677 - 25224775
Alignment:
| Q |
94 |
gacccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||| |||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||| || |||| ||||||||| |||||||||| |
|
|
| T |
25224677 |
gacccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatcaagttttgggaatgcagcagcgttaaaactc |
25224775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 38331109 - 38331204
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||| |||||| |||||||| ||||||||||||||||||||||| |||||| ||| ||||||| | ||| |||||||||| |||||||||| |
|
|
| T |
38331109 |
ccaagagcgcttagatgagatggatcgggtctcttctaacttaaccaatgtcctgagtttgaatccaactttgagcatgcagcagcgttaaaactc |
38331204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 38088614 - 38088711
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||||||||||| ||||||||| || | |||||||||||||| |||| ||||||| || |||||||||| |
|
|
| T |
38088614 |
acccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggttccaggttcgaatccagctttgggcatgcagtagcgttaaaactc |
38088711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 22288245 - 22288311
Alignment:
| Q |
126 |
tctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||| ||||||| || ||||||||||| |
|
|
| T |
22288245 |
tctcttctaacttaaccaaagtcctgagttcgaattcagccttgaacatgcaacaatgttaaaactc |
22288311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 14352533 - 14352634
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttgga----catgcagcagtgttaaaac |
190 |
Q |
| |
|
|||||||||| |||||| |||||||||| |||||||||| ||||||||| | | |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14352533 |
acccaagagcgcttagatgagatggaacaagtctcttctagcttaaccaagatattcggttcgaatccagccttggacatgcatgcagcagtgttaaaac |
14352632 |
T |
|
| Q |
191 |
tc |
192 |
Q |
| |
|
|| |
|
|
| T |
14352633 |
tc |
14352634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 42514586 - 42514665
Alignment:
| Q |
98 |
caagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
||||||| |||||| |||||| |||| |||||||||| |||||| |||||| |||||||||||||| | |||| |||||| |
|
|
| T |
42514586 |
caagagcgcttagatgagatgaaacgtgtctcttctagcttaactaaagtcttgggttcgaatccaactttgggcatgca |
42514665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 46604720 - 46604657
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaat |
160 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||||||| |||||||||||| || |||||||||||| |
|
|
| T |
46604720 |
ccaagagcgcttagatgagatggaacgagtctcttataacttaaccaaggttctgggttcgaat |
46604657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 48211099 - 48211025
Alignment:
| Q |
118 |
ggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||||||||| ||| || | |||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
48211099 |
ggaacgggtctcttctaacttaatcaaggtttttggttcgaatccagccttgagcatgcagcaacgttaaaactc |
48211025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 22755651 - 22755720
Alignment:
| Q |
123 |
gggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| ||||| ||||||||||| || ||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
22755651 |
gggtctattctaggttaaccaaagtactaggttcgaatccagccttgggcatgcagcagcattaaaactc |
22755720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 40294603 - 40294688
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||| ||| ||||| |||| ||||| ||| |||||| ||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
40294603 |
ttagatgagatgacacgagtctcctctaccttaatcaaggtcctgagttcgaatccagccttggatatgcaacaatgttaaaactc |
40294688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 20616202 - 20616146
Alignment:
| Q |
136 |
cttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||| ||||| |||| ||||||||||| |||||||||||||||| ||| |||||| |
|
|
| T |
20616202 |
cttaactaaagttctggattcgaatccagtcttggacatgcagcagcgttgaaactc |
20616146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 9651059 - 9651111
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
||||||||||| |||| || ||| ||||||||||| |||||||||||||||| |
|
|
| T |
9651059 |
gtctcttctaatttaatcatggtcttgggttcgaattcagccttggacatgca |
9651111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 50518686 - 50518634
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgca |
177 |
Q |
| |
|
||||||||||||||||| || ||| || |||||||| ||| |||||||||||| |
|
|
| T |
50518686 |
gtctcttctaacttaactaatgtcatgtgttcgaattcagtcttggacatgca |
50518634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 55123134 - 55123170
Alignment:
| Q |
153 |
gttcgaatccagccttggacatgcagcagtgttaaaa |
189 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
55123134 |
gttcgaatccagccttggaaatgcagcagcgttaaaa |
55123170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 28724652 - 28724748
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||||||| ||||| |||||||||| ||||||| |||||||| ||||||| |||||||||||||| |
|
|
| T |
28724652 |
acccaagagcgcttagatgagatggaacgagtctcttctagcttaat-aaagtcctggattcgaattcagccttgaacatgcaacagtgttaaaactc |
28724748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 45806215 - 45806312
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||| |||||| ||||| |||||||||||||||| ||||||||| |||||| |||||||| ||| ||||| ||||||||||| ||||||||| |
|
|
| T |
45806215 |
acccaggagcgcttagatgagatagaacgggtctcttctatcttaaccaaggtcctgagttcgaattcagtcttgggcatgcagcagttttaaaactc |
45806312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 16756061 - 16756158
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||||||| ||||||||| || ||||||| |||| |||| |||| ||||||| || |||||||||| |
|
|
| T |
16756061 |
acccaagagcgcttagatgagatggaacggatctcttctagcttaaccaaggttctgggtttgaattcagcattgggcatgcagaagcgttaaaactc |
16756158 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 22022099 - 22022196
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||| ||||| |||||||||| ||||||||||| |||||| || || ||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
22022099 |
acccaagagcgtttagatgagatggaacaggtctcttctagcttaactaaggttgtgggttcgaatccagccttgggcatgcagcagcattaaaactc |
22022196 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 12035545 - 12035622
Alignment:
| Q |
112 |
cgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaa |
189 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||| | ||||||||||||||||| | |||||| || |||||||| |
|
|
| T |
12035545 |
cgagatggaaagggtctcttctagtttaaccaaagtctttggttcgaatccagcctttggcatgcaacattgttaaaa |
12035622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 29124736 - 29124821
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||| |||| |||||||||| |||||||| ||| || ||||||||||||| |||| |||||||||| |||||||||| |
|
|
| T |
29124736 |
ttagatgagatgaaacgagtctcttctagcttaaccagggtcatgagttcgaatccagcattgggcatgcagcagcgttaaaactc |
29124821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 18428271 - 18428207
Alignment:
| Q |
127 |
ctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
||||| || ||||||||| || |||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
18428271 |
ctcttgtagcttaaccaaggttctggattcgaatccaaccttgggcatgcagcagtgttaaaact |
18428207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 32883699 - 32883635
Alignment:
| Q |
128 |
tcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||| ||||||||| | |||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
32883699 |
tcttctagcttaaccaagattttgggttcgaatccagcattggacatgcagcagcgttaaaactc |
32883635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 14500420 - 14500361
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggt |
154 |
Q |
| |
|
||||||||| |||||| | |||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
14500420 |
acccaagagtgcttagatgcgatggaacgggtctcttctagcttaaccaaggtcctgggt |
14500361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 24801402 - 24801457
Alignment:
| Q |
137 |
ttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
24801402 |
ttaactaaagtccttggttcgaatccagccttaggcatgcagcactgttaaaactc |
24801457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 40019250 - 40019317
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||| |||||||||| |||||||| |||||||||| |
|
|
| T |
40019250 |
gtctcttctaacttaatcaaggttttgggttcgaattcagccttggatatgcagcaacgttaaaactc |
40019317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 13546436 - 13546502
Alignment:
| Q |
126 |
tctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||||| ||| ||||| | || ||||||||||| |
|
|
| T |
13546436 |
tctcttctaacttaactaaagtcgtgggttcgaatccagtcttatacatgtaacaatgttaaaactc |
13546502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 17600648 - 17600563
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||| |||||||||||||| ||||||||| ||| |||||| |||| |||||||| |||||| || |||||||||| |
|
|
| T |
17600648 |
ttagatgagatgacacgggtctcttctagcttaaccaaggtcttgggttagaattcagccttgagcatgcaacatcgttaaaactc |
17600563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 21774612 - 21774668
Alignment:
| Q |
125 |
gtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcag |
181 |
Q |
| |
|
|||||||||| ||||| ||| || ||||||||||||||| |||||||||||||||| |
|
|
| T |
21774612 |
gtctcttctagcttaatcaaggttttgggttcgaatccagtcttggacatgcagcag |
21774668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 31733820 - 31733756
Alignment:
| Q |
128 |
tcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||| |||| || | |||||||||| |||||||||| |
|
|
| T |
31733820 |
tcttctaacttaaccaatgttttgggttcgaattcagcattaggcatgcagcagagttaaaactc |
31733756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 192
Target Start/End: Complemental strand, 9781093 - 9781054
Alignment:
| Q |
153 |
gttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
9781093 |
gttcgaatccagccttgggcatgcagcagcgttaaaactc |
9781054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 10750579 - 10750674
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
|||||||| |||||| |||||| ||| |||| |||||| |||||||| ||| |||||||||||| | ||||| ||| || ||| |||||||||| |
|
|
| T |
10750579 |
ccaagagcgcttagatgagatgaaacatgtcttttctaatttaaccaaggtcttgggttcgaatctaatcttgggcatacatcagcgttaaaactc |
10750674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 10840998 - 10841076
Alignment:
| Q |
97 |
ccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatg |
175 |
Q |
| |
|
|||||||| |||||| |||||| ||| ||||||||||| ||||||||| | ||||||| ||| ||||||||| |||| |
|
|
| T |
10840998 |
ccaagagcgcttagatgagatgaaacaggtctcttctatcttaaccaagattttgggttcaaattcagccttgggcatg |
10841076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 36982346 - 36982431
Alignment:
| Q |
107 |
ttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||| |||||| || ||||||||||| |||||||| ||| |||||||||| ||||||| |||||||| || |||||||||| |
|
|
| T |
36982346 |
ttagatgagatgacacaggtctcttctagtttaaccaaggtctcgggttcgaattcagccttagacatgcaacaacgttaaaactc |
36982431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 7242912 - 7242872
Alignment:
| Q |
152 |
ggttcgaatccagccttggacatgcagcagtgttaaaactc |
192 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
7242912 |
ggttcgaatccagtcttggacatgcagcaacgttaaaactc |
7242872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 52912618 - 52912674
Alignment:
| Q |
113 |
gagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttg |
169 |
Q |
| |
|
|||||||||||||||||| || ||||||||| || ||||||||||||||| |||| |
|
|
| T |
52912618 |
gagatggaacgggtctctattagcttaaccaagatcttgggttcgaatccagtcttg |
52912674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0020 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 167834 - 167918
Alignment:
| Q |
95 |
acccaagagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcag |
181 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||||||||||| ||||| ||| ||| |||||| ||||||||||||| |||||||||| |
|
|
| T |
167834 |
acccaagagcgcttagatgagatgaaacgggtctcttctagcttaatcaaggtc--gggttcaaatccagccttgggcatgcagcag |
167918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 32421 - 32330
Alignment:
| Q |
100 |
agagcacttagacgagatggaacgggtctcttctaacttaaccaaagtcctgggttcgaatccagccttggacatgcagcagtgttaaaact |
191 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||| ||| ||||| || ||||||||||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
32421 |
agagcatttagataagatggaacgggtctcttctagcttcaccaaggttctgggttcgaatccaatcttgggtatgcagcagcgttaaaact |
32330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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