View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21226_high_14 (Length: 275)
Name: NF21226_high_14
Description: NF21226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21226_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 32615374 - 32615119
Alignment:
| Q |
1 |
ttgatagttttgtttaatgtggccgttgaatcataaagaagacaacgcattttggatgtttcatttttatatacccttcccttgtatgtgtttcttagct |
100 |
Q |
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| T |
32615374 |
ttgatagttttgtttaatgtggccgttgaatcataaagaagacaacgcattttggatgtttcatttttatatacccttcccttgtatgtatttcttagct |
32615275 |
T |
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| Q |
101 |
tactagtatagaattgtggataaacataacaggccccttcttcaaaagcatgcaactatgaggatttggtccctatggctgataaaactgcttggcagat |
200 |
Q |
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|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32615274 |
tactagtacaaaattgtggataaacataacaggccccttcttcaaaagcatgcaactatgaggatttggtccctatggctgataaaactgcttggcagat |
32615175 |
T |
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| Q |
201 |
ggtggaaaaagctaagtcatttgcagtaccaaaaggtacatatatgtagatatgcat |
257 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32615174 |
ggtggaaaaaactaagtcatttgcagtaccaaaaggtacatatatgta-atatgcat |
32615119 |
T |
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